AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004386.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004386.01.T01 MTR_1g078110 91.136 722 26 1 1 684 39 760 0.0 1336
MsG0180004386.01.T01 MTR_8g024380 79.391 723 106 4 1 680 39 761 0.0 1162
MsG0180004386.01.T01 MTR_8g024420 67.586 725 182 8 1 679 6 723 0.0 951
MsG0180004386.01.T01 MTR_8g024390 66.300 727 192 8 1 679 38 759 0.0 938
MsG0180004386.01.T01 MTR_2g049200 67.623 732 182 10 1 684 38 762 0.0 934
MsG0180004386.01.T01 MTR_8g024370 65.800 731 188 11 1 679 38 758 0.0 912
MsG0180004386.01.T01 MTR_7g118080 63.674 724 213 8 1 680 41 758 0.0 904
MsG0180004386.01.T01 MTR_7g079310 49.795 731 307 13 1 677 39 763 0.0 683
MsG0180004386.01.T01 MTR_7g079300 48.361 732 318 13 1 677 39 765 0.0 663
MsG0180004386.01.T01 MTR_1g079120 49.313 728 308 15 1 677 43 760 0.0 657
MsG0180004386.01.T01 MTR_4g073540 41.145 751 349 16 2 681 43 771 1.84e-178 528
MsG0180004386.01.T01 MTR_2g042130 38.814 742 378 12 2 675 37 770 2.61e-173 514
MsG0180004386.01.T01 MTR_4g095360 39.864 735 366 11 1 678 40 755 2.67e-173 514
MsG0180004386.01.T01 MTR_1g102350 38.184 749 377 13 2 680 47 779 3.32e-171 509
MsG0180004386.01.T01 MTR_8g022870 40.824 752 355 13 2 678 40 776 5.88e-171 508
MsG0180004386.01.T01 MTR_3g102810 42.334 737 345 14 1 675 34 752 1.34e-170 507
MsG0180004386.01.T01 MTR_7g075900 40.625 704 351 13 35 678 76 772 1.11e-167 500
MsG0180004386.01.T01 MTR_7g098630 39.865 740 358 16 5 677 41 760 4.66e-167 501
MsG0180004386.01.T01 MTR_5g016120 40.650 738 357 15 1 678 45 761 3.15e-165 493
MsG0180004386.01.T01 MTR_4g125180 40.309 712 336 19 39 678 58 752 1.41e-164 491
MsG0180004386.01.T01 MTR_4g102400 40.054 734 336 20 6 677 61 752 9.03e-163 486
MsG0180004386.01.T01 MTR_8g021130 41.069 711 344 14 33 675 69 772 1.99e-162 487
MsG0180004386.01.T01 MTR_1g018510 39.513 739 367 14 1 675 1 723 2.86e-162 484
MsG0180004386.01.T01 MTR_0047s0120 39.782 734 363 12 1 675 41 754 1.84e-161 483
MsG0180004386.01.T01 MTR_5g011310 39.452 730 341 18 9 677 64 753 4.55e-148 449
MsG0180004386.01.T01 MTR_3g082200 38.835 721 339 21 39 680 75 772 1.26e-143 437
MsG0180004386.01.T01 MTR_4g134320 38.028 710 360 14 39 681 73 769 5.18e-143 436
MsG0180004386.01.T01 MTR_7g098070 38.028 710 359 13 39 681 70 765 2.38e-142 434
MsG0180004386.01.T01 MTR_5g011340 39.041 730 344 18 9 677 61 750 7.34e-142 432
MsG0180004386.01.T01 MTR_5g011190 39.048 735 337 20 9 677 64 753 1.07e-141 432
MsG0180004386.01.T01 MTR_8g083220 36.905 756 374 17 2 684 56 781 2.78e-140 429
MsG0180004386.01.T01 MTR_4g103480 39.492 709 348 18 39 677 89 786 2.12e-139 427
MsG0180004386.01.T01 MTR_5g011320 38.134 729 351 17 9 677 57 745 3.18e-139 426
MsG0180004386.01.T01 MTR_8g033150 39.568 695 342 17 39 679 56 726 3.21e-139 425
MsG0180004386.01.T01 MTR_5g011370 38.670 737 337 21 9 677 84 773 3.26e-139 426
MsG0180004386.01.T01 MTR_8g033150 40.029 697 336 19 39 679 83 753 8.04e-139 425
MsG0180004386.01.T01 MTR_7g081580 38.858 718 350 19 39 677 76 783 9.36e-139 426
MsG0180004386.01.T01 MTR_5g096750 38.696 721 351 18 32 683 69 767 9.70e-139 425
MsG0180004386.01.T01 MTR_5g025010 37.464 702 354 15 40 677 37 717 1.27e-138 423
MsG0180004386.01.T01 MTR_4g103450 39.351 709 349 18 39 677 46 743 1.56e-138 424
MsG0180004386.01.T01 MTR_5g025010 37.464 702 354 15 40 677 69 749 3.08e-138 423
MsG0180004386.01.T01 MTR_8g072440 37.037 702 355 15 40 677 32 710 5.25e-138 421
MsG0180004386.01.T01 MTR_4g103430 37.989 716 348 19 39 677 72 768 1.04e-137 422
MsG0180004386.01.T01 MTR_8g072440 37.037 702 355 15 40 677 74 752 1.78e-137 421
MsG0180004386.01.T01 MTR_3g082200 39.248 665 308 20 89 680 8 649 8.60e-135 411
MsG0180004386.01.T01 MTR_8g079900 38.451 697 347 17 39 679 73 743 1.84e-133 410
MsG0180004386.01.T01 MTR_4g053630 38.102 706 361 16 40 682 42 734 3.49e-132 407
MsG0180004386.01.T01 MTR_8g042670 37.941 709 346 17 39 677 73 757 4.04e-131 405
MsG0180004386.01.T01 MTR_5g011280 36.828 725 364 18 11 677 67 755 7.33e-131 404
MsG0180004386.01.T01 MTR_6g055570 36.799 731 368 22 9 680 37 732 1.21e-130 403
MsG0180004386.01.T01 MTR_4g053630 39.222 668 330 16 78 682 3 657 1.22e-129 398
MsG0180004386.01.T01 MTR_7g034380 37.249 698 352 18 33 677 27 691 9.37e-129 397
MsG0180004386.01.T01 MTR_3g104930 37.830 719 348 20 39 678 64 762 1.42e-128 398
MsG0180004386.01.T01 MTR_8g079900 38.681 667 327 17 69 679 5 645 7.15e-128 393
MsG0180004386.01.T01 MTR_3g082200 39.531 640 291 20 114 680 18 634 8.27e-128 392
MsG0180004386.01.T01 MTR_3g114420 37.027 713 363 20 39 680 70 767 1.19e-127 396
MsG0180004386.01.T01 MTR_8g042710 36.681 717 361 17 38 677 63 763 1.38e-127 396
MsG0180004386.01.T01 MTR_2g018135 36.531 761 371 23 6 678 47 783 1.53e-127 396
MsG0180004386.01.T01 MTR_5g055920 40.126 633 300 16 112 677 46 666 5.01e-127 392
MsG0180004386.01.T01 MTR_3g010080 37.535 706 352 19 32 682 65 736 8.97e-127 393
MsG0180004386.01.T01 MTR_4g053635 37.283 692 355 17 54 682 2 677 1.12e-125 388
MsG0180004386.01.T01 MTR_8g027260 37.252 655 337 15 33 680 67 654 1.40e-125 387
MsG0180004386.01.T01 MTR_6g055410 36.653 723 362 23 9 680 37 714 1.46e-125 389
MsG0180004386.01.T01 MTR_2g018125 37.037 729 355 19 40 678 70 784 2.11e-125 391
MsG0180004386.01.T01 MTR_5g011260 37.381 733 349 22 9 677 65 751 2.69e-125 390
MsG0180004386.01.T01 MTR_7g075890 36.797 693 360 16 39 677 229 897 9.94e-125 392
MsG0180004386.01.T01 MTR_1g006990 36.209 707 360 18 33 682 67 739 7.34e-124 385
MsG0180004386.01.T01 MTR_4g103495 39.482 656 306 17 39 618 73 713 2.12e-123 385
MsG0180004386.01.T01 MTR_8g006680 37.482 707 341 21 33 682 65 727 2.45e-123 384
MsG0180004386.01.T01 MTR_8g005300 37.482 707 341 21 33 682 65 727 2.45e-123 384
MsG0180004386.01.T01 MTR_8g005640 37.482 707 341 21 33 682 65 727 2.45e-123 384
MsG0180004386.01.T01 MTR_5g011270 36.626 729 360 18 9 677 65 751 3.94e-123 384
MsG0180004386.01.T01 MTR_1g007030 35.734 708 362 18 32 682 66 737 1.01e-122 382
MsG0180004386.01.T01 MTR_6g075370 35.988 653 375 13 24 668 60 677 1.08e-122 381
MsG0180004386.01.T01 MTR_7g104200 34.871 737 381 15 2 677 43 741 5.72e-122 380
MsG0180004386.01.T01 MTR_4g103495 39.465 636 298 17 114 677 3 623 5.21e-120 372
MsG0180004386.01.T01 MTR_1g048110 36.714 700 358 20 33 680 67 733 8.28e-120 375
MsG0180004386.01.T01 MTR_8g005710 34.665 701 371 16 37 680 31 701 1.82e-117 368
MsG0180004386.01.T01 MTR_8g042670 37.579 636 308 15 108 677 21 633 3.88e-116 362
MsG0180004386.01.T01 MTR_7g079295 55.828 326 136 5 1 320 39 362 3.15e-112 348
MsG0180004386.01.T01 MTR_7g079295 50.296 169 72 4 511 677 351 509 1.97e-38 150
MsG0180004386.01.T01 MTR_3g464790 35.815 712 337 21 39 678 69 732 2.00e-110 350
MsG0180004386.01.T01 MTR_2g044630 33.813 695 354 23 33 677 67 705 9.98e-103 329
MsG0180004386.01.T01 MTR_3g452290 34.434 636 328 19 67 680 3 571 5.72e-96 308
MsG0180004386.01.T01 MTR_3g451220 34.434 636 328 19 67 680 3 571 5.72e-96 308
MsG0180004386.01.T01 MTR_2g042640 34.526 643 318 17 33 639 36 611 9.12e-92 298
MsG0180004386.01.T01 MTR_3g114410 38.654 520 247 13 39 495 70 580 8.79e-90 291
MsG0180004386.01.T01 MTR_8g042710 36.911 531 253 12 38 495 63 584 1.02e-87 288
MsG0180004386.01.T01 MTR_8g027660 65.990 197 42 2 488 683 80 252 2.51e-79 253
MsG0180004386.01.T01 MTR_2g042650 30.853 645 308 20 82 682 97 647 3.41e-75 254
MsG0180004386.01.T01 MTR_4g103400 45.875 303 149 7 39 329 72 371 6.58e-70 243
MsG0180004386.01.T01 MTR_4g103400 41.534 313 171 9 369 677 472 776 2.17e-57 208
MsG0180004386.01.T01 MTR_4g071560 35.238 525 233 15 39 496 36 520 1.83e-69 236
MsG0180004386.01.T01 MTR_7g081750 44.828 290 148 6 392 677 516 797 4.52e-68 238
MsG0180004386.01.T01 MTR_7g081750 41.509 318 171 6 39 342 75 391 4.51e-63 224
MsG0180004386.01.T01 MTR_7g081380 45.017 291 147 8 392 677 524 806 8.79e-66 232
MsG0180004386.01.T01 MTR_7g081380 40.373 322 173 7 39 342 76 396 8.03e-59 213
MsG0180004386.01.T01 MTR_4g103490 43.709 302 155 6 39 329 76 373 2.45e-65 231
MsG0180004386.01.T01 MTR_4g103490 41.234 308 170 8 373 677 484 783 7.25e-59 213
MsG0180004386.01.T01 MTR_7g081420 44.211 285 147 7 397 677 508 784 3.28e-65 230
MsG0180004386.01.T01 MTR_7g081420 41.694 307 164 7 39 331 76 381 4.53e-59 213
MsG0180004386.01.T01 MTR_3g061110 43.408 311 165 7 369 677 451 752 1.01e-64 228
MsG0180004386.01.T01 MTR_3g061110 38.870 301 164 4 39 332 72 359 9.20e-59 212
MsG0180004386.01.T01 MTR_7g481600 41.720 314 168 6 368 677 481 783 2.55e-64 228
MsG0180004386.01.T01 MTR_7g481600 41.875 320 169 7 39 343 76 393 6.95e-61 218
MsG0180004386.01.T01 MTR_7g081500 42.345 307 162 7 375 677 487 782 6.08e-64 226
MsG0180004386.01.T01 MTR_7g081500 42.006 319 168 7 39 342 75 391 2.35e-62 222
MsG0180004386.01.T01 MTR_5g085690 43.289 298 145 8 389 677 506 788 3.86e-62 222
MsG0180004386.01.T01 MTR_5g085690 40.385 312 167 6 39 332 73 383 2.29e-58 211
MsG0180004386.01.T01 MTR_5g044060 74.265 136 34 1 392 526 1 136 1.18e-61 204
MsG0180004386.01.T01 MTR_3g114140 33.827 473 223 15 175 635 27 421 9.74e-59 204
MsG0180004386.01.T01 MTR_4g127480 38.436 307 170 8 38 329 88 390 5.65e-58 210
MsG0180004386.01.T01 MTR_4g127480 36.177 293 152 11 402 676 537 812 1.42e-35 144
MsG0180004386.01.T01 MTR_2g037850 38.944 303 170 7 40 329 90 390 2.37e-57 209
MsG0180004386.01.T01 MTR_2g037850 38.235 238 124 7 402 625 537 765 4.80e-29 124
MsG0180004386.01.T01 MTR_4g132620 35.065 308 191 4 40 339 92 398 9.25e-47 178
MsG0180004386.01.T01 MTR_4g132620 32.975 279 166 7 404 672 542 809 1.18e-30 129
MsG0180004386.01.T01 MTR_3g114160 34.783 322 161 5 39 355 7 284 1.54e-46 169
MsG0180004386.01.T01 MTR_5g081100 30.505 436 206 14 39 424 38 426 3.52e-46 170
MsG0180004386.01.T01 MTR_2g046740 35.831 307 182 8 40 333 110 414 1.48e-44 171
MsG0180004386.01.T01 MTR_2g046740 34.122 296 154 13 404 677 562 838 1.45e-25 113
MsG0180004386.01.T01 MTR_5g081280 34.084 311 148 9 27 316 27 301 8.50e-44 160
MsG0180004386.01.T01 MTR_8g089230 34.185 313 179 9 40 333 118 422 5.63e-40 157
MsG0180004386.01.T01 MTR_8g089230 33.225 307 173 12 388 677 554 845 4.60e-29 124
MsG0180004386.01.T01 MTR_8g092940 34.034 238 141 5 19 256 8 229 4.61e-34 130
MsG0180004386.01.T01 MTR_2g070250 31.268 339 158 13 125 420 100 406 5.46e-33 132
MsG0180004386.01.T01 MTR_2g070260 40.097 207 105 7 464 665 1 193 8.58e-33 126
MsG0180004386.01.T01 MTR_4g126230 35.193 233 122 7 381 605 37 248 7.23e-32 124
MsG0180004386.01.T01 MTR_4g053665 34.866 261 123 7 423 682 1 215 4.55e-29 115
MsG0180004386.01.T01 MTR_7g081660 37.778 180 103 3 500 677 380 552 1.28e-27 118
MsG0180004386.01.T01 MTR_5g081130 34.637 179 98 6 507 677 5 172 2.13e-20 90.5
MsG0180004386.01.T01 MTR_5g011300 51.648 91 43 1 464 554 1 90 1.84e-17 78.6
MsG0180004386.01.T01 MTR_8g027670 56.250 80 35 0 551 630 33 112 1.44e-14 70.9
MsG0180004386.01.T01 MTR_3g005755 43.038 79 44 1 446 523 228 306 2.59e-13 71.6
MsG0180004386.01.T01 MTR_3g114400 32.402 179 90 9 508 678 8 163 1.32e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004386.01.T01 AT5G67090 45.020 733 314 18 2 680 35 732 0.0 573
MsG0180004386.01.T01 AT4G34980 41.129 744 355 15 1 680 37 761 1.05e-179 530
MsG0180004386.01.T01 AT5G67360 41.454 743 342 15 1 678 41 755 3.08e-176 521
MsG0180004386.01.T01 AT2G05920 39.945 731 359 11 2 675 40 747 2.33e-175 519
MsG0180004386.01.T01 AT3G14240 41.255 749 352 13 2 678 38 770 6.26e-173 513
MsG0180004386.01.T01 AT3G14067 39.218 742 368 16 2 677 43 767 2.00e-170 507
MsG0180004386.01.T01 AT5G51750 37.736 742 390 11 1 680 46 777 4.29e-164 491
MsG0180004386.01.T01 AT1G04110 38.710 744 376 16 3 678 40 771 6.27e-164 490
MsG0180004386.01.T01 AT1G01900 41.977 698 339 12 41 678 81 772 7.65e-161 482
MsG0180004386.01.T01 AT1G20160 39.271 713 345 18 39 679 28 724 6.32e-144 437
MsG0180004386.01.T01 AT1G20160 39.271 713 345 18 39 679 67 763 4.95e-143 436
MsG0180004386.01.T01 AT4G10550 38.366 722 347 21 39 683 16 716 9.69e-138 421
MsG0180004386.01.T01 AT4G10550 38.366 722 347 21 39 683 16 716 9.69e-138 421
MsG0180004386.01.T01 AT4G10550 38.366 722 347 21 39 683 72 772 3.98e-137 421
MsG0180004386.01.T01 AT4G10550 38.366 722 347 21 39 683 88 788 1.08e-136 421
MsG0180004386.01.T01 AT4G00230 37.465 710 365 17 25 679 60 745 4.11e-130 402
MsG0180004386.01.T01 AT4G10540 37.155 724 358 21 37 683 66 769 9.78e-130 402
MsG0180004386.01.T01 AT5G59810 37.042 710 356 16 39 677 85 774 1.18e-128 399
MsG0180004386.01.T01 AT5G59190 38.075 696 343 19 39 681 32 692 3.07e-128 395
MsG0180004386.01.T01 AT4G10510 36.150 722 364 19 39 684 1 701 5.29e-128 395
MsG0180004386.01.T01 AT4G10510 36.250 720 366 19 39 684 16 716 7.41e-128 395
MsG0180004386.01.T01 AT1G32960 36.878 724 356 20 39 683 70 771 2.65e-127 395
MsG0180004386.01.T01 AT4G10510 36.250 720 366 19 39 684 60 760 2.75e-127 395
MsG0180004386.01.T01 AT4G10510 36.250 720 366 19 39 684 72 772 4.01e-127 395
MsG0180004386.01.T01 AT1G32940 37.793 725 348 22 39 683 16 717 4.45e-127 393
MsG0180004386.01.T01 AT1G32940 37.793 725 348 22 39 683 16 717 4.45e-127 393
MsG0180004386.01.T01 AT1G32940 37.793 725 348 22 39 683 67 768 1.27e-126 394
MsG0180004386.01.T01 AT5G58840 38.599 671 356 17 33 677 66 706 2.52e-126 391
MsG0180004386.01.T01 AT5G03620 36.275 714 351 15 40 677 73 758 1.97e-125 390
MsG0180004386.01.T01 AT4G10520 36.714 700 372 16 39 683 67 750 2.02e-125 390
MsG0180004386.01.T01 AT4G26330 36.158 708 376 15 39 677 21 721 2.61e-125 389
MsG0180004386.01.T01 AT5G58830 38.609 676 350 18 33 677 64 705 2.09e-124 386
MsG0180004386.01.T01 AT1G66210 36.467 702 368 18 39 684 78 757 2.31e-123 385
MsG0180004386.01.T01 AT3G46850 37.196 699 359 20 32 677 63 734 9.54e-123 382
MsG0180004386.01.T01 AT5G11940 35.431 731 384 23 22 684 49 759 5.63e-122 381
MsG0180004386.01.T01 AT4G26330 35.457 722 376 16 39 677 21 735 1.61e-121 380
MsG0180004386.01.T01 AT4G21640 37.122 695 380 17 21 677 52 727 3.11e-121 379
MsG0180004386.01.T01 AT4G21630 36.813 728 365 21 21 677 50 753 3.17e-121 379
MsG0180004386.01.T01 AT5G58820 37.305 705 366 20 12 677 33 700 8.92e-121 376
MsG0180004386.01.T01 AT5G59100 34.894 705 373 15 33 680 65 740 6.99e-120 375
MsG0180004386.01.T01 AT4G21650 36.562 733 365 24 21 677 52 760 6.13e-118 371
MsG0180004386.01.T01 AT1G32950 36.718 719 363 22 39 683 16 716 2.37e-117 368
MsG0180004386.01.T01 AT3G46840 36.571 700 361 21 32 677 64 734 4.39e-117 368
MsG0180004386.01.T01 AT4G21323 36.953 709 355 18 39 684 118 797 6.76e-117 369
MsG0180004386.01.T01 AT5G59130 35.591 694 366 16 32 677 26 686 1.27e-116 365
MsG0180004386.01.T01 AT1G32950 36.193 746 375 24 21 683 40 767 1.44e-116 367
MsG0180004386.01.T01 AT1G20150 35.278 720 373 18 40 679 66 772 3.59e-116 367
MsG0180004386.01.T01 AT5G59130 35.879 694 364 17 32 677 65 725 4.22e-116 365
MsG0180004386.01.T01 AT5G59130 35.725 683 370 16 32 677 65 715 1.76e-115 363
MsG0180004386.01.T01 AT1G66220 34.801 704 371 19 39 684 75 748 4.77e-115 363
MsG0180004386.01.T01 AT5G59090 35.673 698 366 18 32 677 62 728 5.86e-115 362
MsG0180004386.01.T01 AT5G59090 35.530 698 362 18 32 677 62 723 1.09e-114 361
MsG0180004386.01.T01 AT5G59090 35.960 698 362 19 32 677 62 726 4.00e-114 360
MsG0180004386.01.T01 AT5G59130 35.735 694 361 18 32 677 65 721 2.48e-113 358
MsG0180004386.01.T01 AT4G21326 36.047 688 375 15 39 677 16 687 3.43e-112 353
MsG0180004386.01.T01 AT5G59120 33.975 727 385 21 12 677 35 727 6.90e-112 354
MsG0180004386.01.T01 AT4G10530 34.468 705 372 18 39 683 67 741 3.43e-110 350
MsG0180004386.01.T01 AT4G15040 33.524 701 370 13 32 677 26 685 1.34e-99 320
MsG0180004386.01.T01 AT4G15040 33.524 701 370 13 32 677 26 685 1.34e-99 320
MsG0180004386.01.T01 AT5G58840 39.588 485 252 11 33 495 66 531 6.82e-97 309
MsG0180004386.01.T01 AT4G00230 37.593 540 271 12 25 514 60 583 2.09e-95 307
MsG0180004386.01.T01 AT1G32940 38.504 548 247 17 39 510 67 600 2.72e-94 304
MsG0180004386.01.T01 AT5G03620 37.838 518 249 10 40 497 73 577 2.27e-93 301
MsG0180004386.01.T01 AT1G32970 38.194 576 269 18 176 683 172 728 4.86e-92 302
MsG0180004386.01.T01 AT1G20160 35.281 462 223 11 29 424 57 508 2.39e-73 247
MsG0180004386.01.T01 AT2G04160 44.737 304 150 4 39 329 75 373 9.45e-73 251
MsG0180004386.01.T01 AT2G04160 44.013 309 151 10 377 677 476 770 9.74e-63 223
MsG0180004386.01.T01 AT5G58840 36.473 414 222 10 33 424 66 460 3.90e-67 228
MsG0180004386.01.T01 AT5G45650 38.950 362 169 9 3 324 38 387 1.11e-66 234
MsG0180004386.01.T01 AT5G45650 41.250 320 163 9 369 678 485 789 1.27e-55 203
MsG0180004386.01.T01 AT5G45650 38.950 362 169 9 3 324 38 387 1.11e-66 234
MsG0180004386.01.T01 AT5G45650 41.250 320 163 9 369 678 485 789 1.27e-55 203
MsG0180004386.01.T01 AT4G30020 41.100 309 164 8 36 329 82 387 6.59e-60 216
MsG0180004386.01.T01 AT4G30020 35.254 295 163 10 402 681 534 815 4.74e-34 139
MsG0180004386.01.T01 AT4G30020 41.100 309 164 8 36 329 82 387 6.59e-60 216
MsG0180004386.01.T01 AT4G30020 35.254 295 163 10 402 681 534 815 4.74e-34 139
MsG0180004386.01.T01 AT4G30020 41.100 309 164 8 36 329 82 387 6.59e-60 216
MsG0180004386.01.T01 AT4G30020 35.254 295 163 10 402 681 534 815 4.74e-34 139
MsG0180004386.01.T01 AT4G30020 41.100 309 164 8 36 329 82 387 6.59e-60 216
MsG0180004386.01.T01 AT4G30020 35.254 295 163 10 402 681 534 815 4.74e-34 139
MsG0180004386.01.T01 AT2G19170 39.482 309 168 8 36 329 82 386 2.59e-59 214
MsG0180004386.01.T01 AT2G19170 36.426 291 155 11 402 676 533 809 7.15e-35 142
MsG0180004386.01.T01 AT2G19170 39.482 309 168 8 36 329 82 386 2.59e-59 214
MsG0180004386.01.T01 AT2G19170 36.426 291 155 11 402 676 533 809 7.15e-35 142
MsG0180004386.01.T01 AT5G45640 40.379 317 141 7 47 321 38 348 1.01e-57 209
MsG0180004386.01.T01 AT5G45640 35.764 288 157 6 397 678 487 752 6.95e-40 157
MsG0180004386.01.T01 AT1G30600 38.658 313 165 11 40 333 98 402 7.78e-50 187
MsG0180004386.01.T01 AT1G30600 34.185 313 168 13 389 677 528 826 9.90e-32 132
MsG0180004386.01.T01 AT5G44530 36.808 307 179 8 40 333 106 410 2.52e-48 180
MsG0180004386.01.T01 AT2G39850 34.796 319 181 7 32 337 58 362 2.76e-48 182
MsG0180004386.01.T01 AT2G39850 35.593 354 188 15 349 681 435 769 2.36e-44 171
MsG0180004386.01.T01 AT4G20430 34.740 308 185 7 40 333 119 424 1.17e-47 181
MsG0180004386.01.T01 AT4G20430 34.932 292 158 11 404 678 549 825 2.31e-32 134
MsG0180004386.01.T01 AT5G44530 36.808 307 179 8 40 333 106 410 1.38e-47 181
MsG0180004386.01.T01 AT5G44530 32.911 316 155 12 404 677 558 858 5.18e-29 124
MsG0180004386.01.T01 AT5G44530 36.808 307 179 8 40 333 106 410 1.39e-47 181
MsG0180004386.01.T01 AT5G44530 35.052 291 157 11 404 677 558 833 4.21e-32 133
MsG0180004386.01.T01 AT4G20430 34.740 308 185 7 40 333 119 424 1.84e-47 180
MsG0180004386.01.T01 AT4G20430 34.932 292 158 11 404 678 573 849 2.88e-32 134
MsG0180004386.01.T01 AT4G20430 34.740 308 185 7 40 333 119 424 1.84e-47 180
MsG0180004386.01.T01 AT4G20430 34.932 292 158 11 404 678 573 849 2.88e-32 134
MsG0180004386.01.T01 AT1G62340 35.505 307 179 5 40 329 98 402 1.98e-45 174
MsG0180004386.01.T01 AT1G62340 35.314 303 156 14 397 680 551 832 9.99e-33 135
MsG0180004386.01.T01 AT1G32980 47.120 191 90 5 460 646 3 186 1.86e-39 144
MsG0180004386.01.T01 AT5G59110 35.583 163 95 5 521 677 8 166 1.47e-17 81.3

Find 132 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGAAGCTCTCACTTTC+TGG 0.131545 1:+77317088 None:intergenic
TTGACAATTTCACCATTTAT+TGG 0.226730 1:+77316213 None:intergenic
TAAATTAACTTAGAAGAAAT+TGG 0.227288 1:+77317337 None:intergenic
GCTAGCATTGCACCAATTAA+AGG 0.236062 1:-77315484 MsG0180004386.01.T01:CDS
ACCTACACACATGTCATAAA+TGG 0.244639 1:-77317313 MsG0180004386.01.T01:CDS
TCATTAAACACCAACTTGTT+TGG 0.255326 1:+77315442 None:intergenic
TTGAGGGATTCATGTTCTTT+TGG 0.259234 1:+77317271 None:intergenic
ATCATTGTTAATCCAATAAA+TGG 0.259816 1:-77316225 MsG0180004386.01.T01:CDS
GTGACACGAAACCCTTTAAT+TGG 0.274687 1:+77315472 None:intergenic
AATTGGAGAGTTGAGATTAT+TGG 0.274959 1:+77317354 None:intergenic
TCCACTTCAGCAGGAAATAA+TGG 0.288526 1:-77316599 MsG0180004386.01.T01:CDS
GTTGACCATGCATCATTCTT+TGG 0.290954 1:-77316851 MsG0180004386.01.T01:CDS
TGACTAAAATTCCTTCAAAA+TGG 0.291912 1:-77317057 MsG0180004386.01.T01:CDS
AAATTAAAGAAAGTGGCTTT+TGG 0.323736 1:-77315367 MsG0180004386.01.T01:CDS
TATGCAGCTGGAACAGCTTC+AGG 0.326472 1:-77316827 MsG0180004386.01.T01:CDS
CATTAAACACCAACTTGTTT+GGG 0.335235 1:+77315443 None:intergenic
ACATTTGCAGCTATGGAAAA+AGG 0.339315 1:-77316632 MsG0180004386.01.T01:CDS
AACAGTGGCTGGTGGAACTA+TGG 0.348362 1:-77316534 MsG0180004386.01.T01:CDS
TTTAATCCTAAGGTGATGTT+AGG 0.355948 1:+77316935 None:intergenic
CCAGGGTCAAGTGCTCTATT+AGG 0.357114 1:+77315745 None:intergenic
GATGTTATTTCATTATCATT+TGG 0.366621 1:-77316698 MsG0180004386.01.T01:CDS
TGAAAGGAGTGCATAGTGAT+TGG 0.379645 1:-77315897 MsG0180004386.01.T01:CDS
AAGAGATTTACACATGAAAC+TGG 0.387494 1:-77317221 MsG0180004386.01.T01:CDS
CTTTGCAACAAGAAACTCAT+TGG 0.391717 1:-77316995 MsG0180004386.01.T01:CDS
CATAAATCCATGAAAACAAT+TGG 0.392178 1:+77316419 None:intergenic
CCTGGTCTTGTTTATGATGT+TGG 0.393335 1:-77315727 MsG0180004386.01.T01:CDS
TGTGATAAGTGGAACATCTA+TGG 0.398520 1:-77315953 MsG0180004386.01.T01:CDS
TCGCGATGTATAAAGCTATA+TGG 0.400623 1:-77316784 MsG0180004386.01.T01:CDS
TTGAGGCTGGTGACCACAAT+AGG 0.402287 1:+77315304 None:intergenic
TCATTCTTTGGTTATGCAGC+TGG 0.402392 1:-77316839 MsG0180004386.01.T01:CDS
GGAAATGGTAACAAAATCAT+AGG 0.405557 1:-77316482 MsG0180004386.01.T01:CDS
ATGGCGTGTCCTCATGTTGC+AGG 0.412710 1:-77315934 MsG0180004386.01.T01:CDS
AGCGAATTCAATGTGATAAG+TGG 0.413723 1:-77315964 MsG0180004386.01.T01:CDS
CTAGCATTGCACCAATTAAA+GGG 0.414915 1:-77315483 MsG0180004386.01.T01:CDS
TGATGGGTTGAGAATGCTTT+GGG 0.417924 1:+77317433 None:intergenic
TGATTGCTCTAAACCTTCCT+TGG 0.422318 1:-77315623 MsG0180004386.01.T01:CDS
ATGATGGAAATTCTTCTTCA+AGG 0.429465 1:-77315567 MsG0180004386.01.T01:CDS
GAATCTAGAATTTCAATTTG+AGG 0.433320 1:+77315287 None:intergenic
GTGTGATTGACACAGGAGTT+TGG 0.438744 1:-77317111 MsG0180004386.01.T01:CDS
ATTACATCAGATGTTACTAA+TGG 0.444297 1:+77316755 None:intergenic
GGAAGGTTTAGAGCAATCAT+TGG 0.449304 1:+77315627 None:intergenic
TTCGGTAAAGACGTAATTGT+TGG 0.449645 1:-77317133 MsG0180004386.01.T01:CDS
ATAGGATTGTCTCTTTATGT+AGG 0.450151 1:-77316464 MsG0180004386.01.T01:CDS
ATTGGAGCCCAGCAGCTATT+CGG 0.456616 1:-77315879 MsG0180004386.01.T01:CDS
TCCAACACAGGAACATTTGT+AGG 0.457074 1:+77316009 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 1:-77315529 MsG0180004386.01.T01:CDS
GCTTGGCATGATTCAAAGTT+CGG 0.461343 1:-77317151 MsG0180004386.01.T01:CDS
ACACATTCACCTCAATTCCT+TGG 0.462218 1:-77317193 MsG0180004386.01.T01:CDS
CTAGAATTTCAATTTGAGGC+TGG 0.467619 1:+77315291 None:intergenic
AGTGAGAGCTTCAAAGATGA+TGG 0.471893 1:-77317082 MsG0180004386.01.T01:CDS
TATGACAAAATTAAAGAAAG+TGG 0.475264 1:-77315374 MsG0180004386.01.T01:CDS
TCATGCCAAGCGCCTATGTT+GGG 0.475942 1:+77317163 None:intergenic
TATAGCAACATTTGCAGCTA+TGG 0.476286 1:-77316639 MsG0180004386.01.T01:CDS
ATTACACAATGGAACACCTT+GGG 0.479726 1:-77316561 MsG0180004386.01.T01:CDS
ATTTATTGGATTAACAATGA+TGG 0.481158 1:+77316227 None:intergenic
GGGACTCTTACACTTGGAAA+TGG 0.484521 1:-77316497 MsG0180004386.01.T01:CDS
TTGACAAAAGCAATAAAAGA+AGG 0.485601 1:+77315589 None:intergenic
AAATATCCTAACATCACCTT+AGG 0.487319 1:-77316941 MsG0180004386.01.T01:CDS
GGAGCTAAATTCTTCAACAA+AGG 0.488935 1:-77316974 MsG0180004386.01.T01:CDS
AGAAGCTAAGCTACAAATTG+AGG 0.490516 1:-77315411 MsG0180004386.01.T01:CDS
TCCATTATTTCCTGCTGAAG+TGG 0.490841 1:+77316598 None:intergenic
GTTCTATGAAATTCTTGTAT+CGG 0.496052 1:+77315544 None:intergenic
GGATTGAGGCCAAGGAATTG+AGG 0.501455 1:+77317184 None:intergenic
ATTGCCGACCGAATAGCTGC+TGG 0.510132 1:+77315871 None:intergenic
AAGCGCCTATGTTGGGATTG+AGG 0.512206 1:+77317170 None:intergenic
TGCCGCTAAGATCGAAGTAC+CGG 0.513591 1:+77316035 None:intergenic
TGACCAGCTCCCAATGCAAA+AGG 0.515149 1:+77315775 None:intergenic
TGCTTGTCCGTCACCAACAT+TGG 0.519518 1:+77315516 None:intergenic
CATACTTCAACAACAGCAGC+TGG 0.523315 1:-77316881 MsG0180004386.01.T01:CDS
GTGATGGGTTGAGAATGCTT+TGG 0.524686 1:+77317432 None:intergenic
TTTAGAGCAATCATTGGAAG+AGG 0.527393 1:+77315633 None:intergenic
CTTATAGATGAAATGTAACC+TGG 0.540476 1:+77317241 None:intergenic
ATCATGCCAAGCGCCTATGT+TGG 0.540483 1:+77317162 None:intergenic
TGCAAATGTTGCTATAGCTA+CGG 0.540567 1:+77316646 None:intergenic
TTATTGGTTGTTGTGAGTTG+AGG 0.542555 1:+77317370 None:intergenic
GTACCGGGTGCAGTAATGTC+AGG 0.544360 1:+77316051 None:intergenic
TACGAATCAACACTAGGTGC+TGG 0.546608 1:+77316117 None:intergenic
CTATGTTGGGATTGAGGCCA+AGG 0.547070 1:+77317176 None:intergenic
ACGTGTGGAGTTTAATCCTA+AGG 0.552261 1:+77316925 None:intergenic
CATTACACAATGGAACACCT+TGG 0.553218 1:-77316562 MsG0180004386.01.T01:CDS
CCTTGGGTTATAACAGTGGC+TGG 0.554099 1:-77316545 MsG0180004386.01.T01:CDS
GGTTGAGAATGCTTTGGGCA+TGG 0.557128 1:+77317438 None:intergenic
CACTGTTATCCCAAACAAGT+TGG 0.557580 1:-77315452 MsG0180004386.01.T01:CDS
TCAATCCCAACATAGGCGCT+TGG 0.558246 1:-77317168 MsG0180004386.01.T01:CDS
CCAACATCATAAACAAGACC+AGG 0.558341 1:+77315727 None:intergenic
GCCTACAAATGTTCCTGTGT+TGG 0.558529 1:-77316010 MsG0180004386.01.T01:CDS
CTTGGCCTCAATCCCAACAT+AGG 0.559393 1:-77317175 MsG0180004386.01.T01:CDS
TTTCAAGGGACTCTTACACT+TGG 0.559775 1:-77316503 MsG0180004386.01.T01:CDS
ACGAATGGACAACTATATGA+TGG 0.560428 1:+77316081 None:intergenic
AGAAGGGTAGTTAAGATCCA+AGG 0.564628 1:+77315606 None:intergenic
AAGGAACACATCAAAGACAT+TGG 0.567669 1:-77315817 MsG0180004386.01.T01:CDS
GTTGATTCGTATAGTTCAAG+AGG 0.572994 1:-77316105 MsG0180004386.01.T01:CDS
ATCGACTCCGTCAGATATTG+CGG 0.573386 1:+77316718 None:intergenic
TCCTCATGTTGCAGGTGTCG+CGG 0.581039 1:-77315926 MsG0180004386.01.T01:CDS
TGAGACTCAAATTCCAACAC+AGG 0.582851 1:+77315997 None:intergenic
CTCTAATGCAGAGGAAAGAG+TGG 0.584103 1:+77317396 None:intergenic
ATGTCAGGTTTCAACACGAA+TGG 0.584244 1:+77316066 None:intergenic
AAAATTCCTTCAAAATGGAA+AGG 0.586012 1:-77317052 MsG0180004386.01.T01:CDS
AGACATATTTGATAATGCTA+AGG 0.587983 1:-77315836 MsG0180004386.01.T01:CDS
TGACAAAAGCAATAAAAGAA+GGG 0.590695 1:+77315590 None:intergenic
TGGATAAATACCATGTGTGA+TGG 0.592303 1:+77317416 None:intergenic
AAACCTGACATTACTGCACC+CGG 0.592592 1:-77316054 MsG0180004386.01.T01:CDS
TTGCCGACCGAATAGCTGCT+GGG 0.596434 1:+77315872 None:intergenic
ACCCGGTACTTCGATCTTAG+CGG 0.602662 1:-77316037 MsG0180004386.01.T01:CDS
GGATAAATACCATGTGTGAT+GGG 0.605523 1:+77317417 None:intergenic
ACACGTGACACAGAAGGTCA+TGG 0.606072 1:-77316908 MsG0180004386.01.T01:CDS
GTACTTCGATCTTAGCGGCA+TGG 0.611328 1:-77316032 MsG0180004386.01.T01:CDS
CATTCTCAACCCATCACACA+TGG 0.612278 1:-77317426 MsG0180004386.01.T01:CDS
GGGTAGTTAAGATCCAAGGA+AGG 0.612984 1:+77315610 None:intergenic
CCAGCCACTGTTATAACCCA+AGG 0.613408 1:+77316545 None:intergenic
TGTTGTTAGAAGTCCTATTG+TGG 0.614388 1:-77315317 MsG0180004386.01.T01:CDS
GCCGCGACACCTGCAACATG+AGG 0.621524 1:+77315925 None:intergenic
CCTAATAGAGCACTTGACCC+TGG 0.625486 1:-77315745 MsG0180004386.01.T01:CDS
ATTGGAAGAGGATCTTGTGA+TGG 0.630373 1:+77315645 None:intergenic
ATGACCTTCTGTGTCACGTG+TGG 0.632513 1:+77316910 None:intergenic
AACTCCACACGTGACACAGA+AGG 0.636065 1:-77316914 MsG0180004386.01.T01:CDS
ATGTATAAAGCTATATGGCA+AGG 0.636361 1:-77316779 MsG0180004386.01.T01:CDS
GCCCTTAAAACATTACACAA+TGG 0.638156 1:-77316572 MsG0180004386.01.T01:CDS
GAACTATACGAATCAACACT+AGG 0.641343 1:+77316111 None:intergenic
TTGAGGATTCTCTAATGCAG+AGG 0.644462 1:+77317387 None:intergenic
GCCGCTAAGATCGAAGTACC+GGG 0.646643 1:+77316036 None:intergenic
GAGCCCAGCAGCTATTCGGT+CGG 0.647472 1:-77315875 MsG0180004386.01.T01:CDS
TTGATTCGTATAGTTCAAGA+GGG 0.648596 1:-77316104 MsG0180004386.01.T01:CDS
ACAGTTACCAATGTTGGTGA+CGG 0.649485 1:-77315523 MsG0180004386.01.T01:CDS
ATTGTTGGTGTGATTGACAC+AGG 0.656291 1:-77317118 MsG0180004386.01.T01:CDS
GCTACGGCATCTTCATACAA+AGG 0.658914 1:+77316662 None:intergenic
CATAACCAAAGAATGATGCA+TGG 0.668132 1:+77316846 None:intergenic
TGGGTTATAACAGTGGCTGG+TGG 0.669106 1:-77316542 MsG0180004386.01.T01:CDS
ATTGACGCCGCAATATCTGA+CGG 0.680274 1:-77316725 MsG0180004386.01.T01:CDS
AACACCTTGGGTTATAACAG+TGG 0.699640 1:-77316549 MsG0180004386.01.T01:CDS
ACCATTTATGACATGTGTGT+AGG 0.713030 1:+77317312 None:intergenic
CAACATCATAAACAAGACCA+GGG 0.726316 1:+77315728 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAACTTAGAAGAAAT+TGG + Chr1:77315393-77315412 None:intergenic 15.0%
!! ATCATTGTTAATCCAATAAA+TGG - Chr1:77316502-77316521 MsG0180004386.01.T01:CDS 20.0%
!! ATTTATTGGATTAACAATGA+TGG + Chr1:77316503-77316522 None:intergenic 20.0%
!! TATGACAAAATTAAAGAAAG+TGG - Chr1:77317353-77317372 MsG0180004386.01.T01:CDS 20.0%
!!! AATTATTGATTTGGTCAAAT+AGG + Chr1:77316403-77316422 None:intergenic 20.0%
!!! GATGTTATTTCATTATCATT+TGG - Chr1:77316029-77316048 MsG0180004386.01.T01:CDS 20.0%
! AAAATTCCTTCAAAATGGAA+AGG - Chr1:77315675-77315694 MsG0180004386.01.T01:CDS 25.0%
! ATTACATCAGATGTTACTAA+TGG + Chr1:77315975-77315994 None:intergenic 25.0%
! CATAAATCCATGAAAACAAT+TGG + Chr1:77316311-77316330 None:intergenic 25.0%
! GTTCTATGAAATTCTTGTAT+CGG + Chr1:77317186-77317205 None:intergenic 25.0%
! TGACAAAAGCAATAAAAGAA+GGG + Chr1:77317140-77317159 None:intergenic 25.0%
! TGACTAAAATTCCTTCAAAA+TGG - Chr1:77315670-77315689 MsG0180004386.01.T01:CDS 25.0%
! TTGACAAAAGCAATAAAAGA+AGG + Chr1:77317141-77317160 None:intergenic 25.0%
! TTGACAATTTCACCATTTAT+TGG + Chr1:77316517-77316536 None:intergenic 25.0%
!! AAATTAAAGAAAGTGGCTTT+TGG - Chr1:77317360-77317379 MsG0180004386.01.T01:CDS 25.0%
!! CTGCATTCAAATTATTGATT+TGG + Chr1:77316412-77316431 None:intergenic 25.0%
!! TCTTTCATGAAAACAGTTTT+TGG - Chr1:77316580-77316599 MsG0180004386.01.T01:CDS 25.0%
!! TTCCATTGTGTAATGTTTTA+AGG + Chr1:77316160-77316179 None:intergenic 25.0%
!!! AGACATATTTGATAATGCTA+AGG - Chr1:77316891-77316910 MsG0180004386.01.T01:CDS 25.0%
!!! TCCATTGTGTAATGTTTTAA+GGG + Chr1:77316159-77316178 None:intergenic 25.0%
!!! TTTATTGCTTTTGTCAATGA+TGG - Chr1:77317144-77317163 MsG0180004386.01.T01:CDS 25.0%
AAATATCCTAACATCACCTT+AGG - Chr1:77315786-77315805 MsG0180004386.01.T01:CDS 30.0%
AAGAGATTTACACATGAAAC+TGG - Chr1:77315506-77315525 MsG0180004386.01.T01:CDS 30.0%
AATTGGAGAGTTGAGATTAT+TGG + Chr1:77315376-77315395 None:intergenic 30.0%
ATAGGATTGTCTCTTTATGT+AGG - Chr1:77316263-77316282 MsG0180004386.01.T01:intron 30.0%
ATGTATAAAGCTATATGGCA+AGG - Chr1:77315948-77315967 MsG0180004386.01.T01:CDS 30.0%
CTTATAGATGAAATGTAACC+TGG + Chr1:77315489-77315508 None:intergenic 30.0%
GGAAATGGTAACAAAATCAT+AGG - Chr1:77316245-77316264 MsG0180004386.01.T01:intron 30.0%
TTTAATCCTAAGGTGATGTT+AGG + Chr1:77315795-77315814 None:intergenic 30.0%
! ACATGTTCCAATTGTTTTCA+TGG - Chr1:77316301-77316320 MsG0180004386.01.T01:intron 30.0%
! ACTATGGATAGAGATTTTCA+AGG - Chr1:77316209-77316228 MsG0180004386.01.T01:CDS 30.0%
! ATGATGGAAATTCTTCTTCA+AGG - Chr1:77317160-77317179 MsG0180004386.01.T01:CDS 30.0%
! CATTAAACACCAACTTGTTT+GGG + Chr1:77317287-77317306 None:intergenic 30.0%
! CTATGGATAGAGATTTTCAA+GGG - Chr1:77316210-77316229 MsG0180004386.01.T01:CDS 30.0%
! TCATTAAACACCAACTTGTT+TGG + Chr1:77317288-77317307 None:intergenic 30.0%
! TTGATTCGTATAGTTCAAGA+GGG - Chr1:77316623-77316642 MsG0180004386.01.T01:CDS 30.0%
! TTTTGGATATCTAACATGGA+TGG - Chr1:77317377-77317396 MsG0180004386.01.T01:CDS 30.0%
AAGGAACACATCAAAGACAT+TGG - Chr1:77316910-77316929 MsG0180004386.01.T01:CDS 35.0%
ACATTTGCAGCTATGGAAAA+AGG - Chr1:77316095-77316114 MsG0180004386.01.T01:CDS 35.0%
ACCATTTATGACATGTGTGT+AGG + Chr1:77315418-77315437 None:intergenic 35.0%
ACCTACACACATGTCATAAA+TGG - Chr1:77315414-77315433 MsG0180004386.01.T01:CDS 35.0%
ACGAATGGACAACTATATGA+TGG + Chr1:77316649-77316668 None:intergenic 35.0%
AGAAGCTAAGCTACAAATTG+AGG - Chr1:77317316-77317335 MsG0180004386.01.T01:CDS 35.0%
AGCGAATTCAATGTGATAAG+TGG - Chr1:77316763-77316782 MsG0180004386.01.T01:CDS 35.0%
ATAGTGTGTGAAGACAAGAA+TGG - Chr1:77316371-77316390 MsG0180004386.01.T01:intron 35.0%
ATTACACAATGGAACACCTT+GGG - Chr1:77316166-77316185 MsG0180004386.01.T01:CDS 35.0%
CAACATCATAAACAAGACCA+GGG + Chr1:77317002-77317021 None:intergenic 35.0%
CATAACCAAAGAATGATGCA+TGG + Chr1:77315884-77315903 None:intergenic 35.0%
CATAGAACAGTTACCAATGT+TGG - Chr1:77317198-77317217 MsG0180004386.01.T01:CDS 35.0%
CTAGCATTGCACCAATTAAA+GGG - Chr1:77317244-77317263 MsG0180004386.01.T01:CDS 35.0%
CTTTGCAACAAGAAACTCAT+TGG - Chr1:77315732-77315751 MsG0180004386.01.T01:CDS 35.0%
GAACTATACGAATCAACACT+AGG + Chr1:77316619-77316638 None:intergenic 35.0%
GCCCTTAAAACATTACACAA+TGG - Chr1:77316155-77316174 MsG0180004386.01.T01:CDS 35.0%
GGAGCTAAATTCTTCAACAA+AGG - Chr1:77315753-77315772 MsG0180004386.01.T01:CDS 35.0%
GGATAAATACCATGTGTGAT+GGG + Chr1:77315313-77315332 None:intergenic 35.0%
TATAGCAACATTTGCAGCTA+TGG - Chr1:77316088-77316107 MsG0180004386.01.T01:CDS 35.0%
TCGCGATGTATAAAGCTATA+TGG - Chr1:77315943-77315962 MsG0180004386.01.T01:CDS 35.0%
TGCAAATGTTGCTATAGCTA+CGG + Chr1:77316084-77316103 None:intergenic 35.0%
TGGATAAATACCATGTGTGA+TGG + Chr1:77315314-77315333 None:intergenic 35.0%
TGTGATAAGTGGAACATCTA+TGG - Chr1:77316774-77316793 MsG0180004386.01.T01:CDS 35.0%
TGTTGTTAGAAGTCCTATTG+TGG - Chr1:77317410-77317429 MsG0180004386.01.T01:CDS 35.0%
TTCGGTAAAGACGTAATTGT+TGG - Chr1:77315594-77315613 MsG0180004386.01.T01:CDS 35.0%
TTTGAATGCAGCAAAAGCTT+TGG - Chr1:77316421-77316440 MsG0180004386.01.T01:CDS 35.0%
! CATTGTCCTTTCCATTTTGA+AGG + Chr1:77315684-77315703 None:intergenic 35.0%
! CTAGAATTTCAATTTGAGGC+TGG + Chr1:77317439-77317458 None:intergenic 35.0%
! TGGCTTTTGGATATCTAACA+TGG - Chr1:77317373-77317392 MsG0180004386.01.T01:CDS 35.0%
! TTATTGGTTGTTGTGAGTTG+AGG + Chr1:77315360-77315379 None:intergenic 35.0%
! TTGAGGGATTCATGTTCTTT+TGG + Chr1:77315459-77315478 None:intergenic 35.0%
! TTTAGAGCAATCATTGGAAG+AGG + Chr1:77317097-77317116 None:intergenic 35.0%
!! GTTGATTCGTATAGTTCAAG+AGG - Chr1:77316622-77316641 MsG0180004386.01.T01:CDS 35.0%
!!! TTGTGTAATGTTTTAAGGGC+TGG + Chr1:77316155-77316174 None:intergenic 35.0%
AACACCTTGGGTTATAACAG+TGG - Chr1:77316178-77316197 MsG0180004386.01.T01:CDS 40.0%
ACACATTCACCTCAATTCCT+TGG - Chr1:77315534-77315553 MsG0180004386.01.T01:CDS 40.0%
ACGTGTGGAGTTTAATCCTA+AGG + Chr1:77315805-77315824 None:intergenic 40.0%
AGAAGGGTAGTTAAGATCCA+AGG + Chr1:77317124-77317143 None:intergenic 40.0%
AGTGAGAGCTTCAAAGATGA+TGG - Chr1:77315645-77315664 MsG0180004386.01.T01:CDS 40.0%
ATGTCAGGTTTCAACACGAA+TGG + Chr1:77316664-77316683 None:intergenic 40.0%
ATTGGAAGAGGATCTTGTGA+TGG + Chr1:77317085-77317104 None:intergenic 40.0%
ATTGTTGGTGTGATTGACAC+AGG - Chr1:77315609-77315628 MsG0180004386.01.T01:CDS 40.0%
CACTGTTATCCCAAACAAGT+TGG - Chr1:77317275-77317294 MsG0180004386.01.T01:CDS 40.0%
CATTACACAATGGAACACCT+TGG - Chr1:77316165-77316184 MsG0180004386.01.T01:CDS 40.0%
CCAACATCATAAACAAGACC+AGG + Chr1:77317003-77317022 None:intergenic 40.0%
GCTAGCATTGCACCAATTAA+AGG - Chr1:77317243-77317262 MsG0180004386.01.T01:CDS 40.0%
GCTTGGCATGATTCAAAGTT+CGG - Chr1:77315576-77315595 MsG0180004386.01.T01:CDS 40.0%
GTGACACGAAACCCTTTAAT+TGG + Chr1:77317258-77317277 None:intergenic 40.0%
GTTGACCATGCATCATTCTT+TGG - Chr1:77315876-77315895 MsG0180004386.01.T01:CDS 40.0%
TCATTCTTTGGTTATGCAGC+TGG - Chr1:77315888-77315907 MsG0180004386.01.T01:CDS 40.0%
TCCAACACAGGAACATTTGT+AGG + Chr1:77316721-77316740 None:intergenic 40.0%
TCCACTTCAGCAGGAAATAA+TGG - Chr1:77316128-77316147 MsG0180004386.01.T01:CDS 40.0%
TCCATTATTTCCTGCTGAAG+TGG + Chr1:77316132-77316151 None:intergenic 40.0%
TGAGACTCAAATTCCAACAC+AGG + Chr1:77316733-77316752 None:intergenic 40.0%
TGTGAAGACAAGAATGGAAC+TGG - Chr1:77316377-77316396 MsG0180004386.01.T01:CDS 40.0%
TTGAGGATTCTCTAATGCAG+AGG + Chr1:77315343-77315362 None:intergenic 40.0%
TTTCAAGGGACTCTTACACT+TGG - Chr1:77316224-77316243 MsG0180004386.01.T01:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+CGG - Chr1:77317204-77317223 MsG0180004386.01.T01:CDS 40.0%
! GGAAGGTTTAGAGCAATCAT+TGG + Chr1:77317103-77317122 None:intergenic 40.0%
! GTAACCTGGTGCATTTTTGA+GGG + Chr1:77315475-77315494 None:intergenic 40.0%
! TGAAAGGAGTGCATAGTGAT+TGG - Chr1:77316830-77316849 MsG0180004386.01.T01:CDS 40.0%
! TGATTGCTCTAAACCTTCCT+TGG - Chr1:77317104-77317123 MsG0180004386.01.T01:CDS 40.0%
! TGTAACCTGGTGCATTTTTG+AGG + Chr1:77315476-77315495 None:intergenic 40.0%
!! CCTGGTCTTGTTTATGATGT+TGG - Chr1:77317000-77317019 MsG0180004386.01.T01:CDS 40.0%
!! GTTTTTGTTTCCACTTCAGC+AGG - Chr1:77316119-77316138 MsG0180004386.01.T01:CDS 40.0%
!! TCTTTGAAGCTCTCACTTTC+TGG + Chr1:77315642-77315661 None:intergenic 40.0%
!! TGATGGGTTGAGAATGCTTT+GGG + Chr1:77315297-77315316 None:intergenic 40.0%
AAACCTGACATTACTGCACC+CGG - Chr1:77316673-77316692 MsG0180004386.01.T01:CDS 45.0%
ATTGACGCCGCAATATCTGA+CGG - Chr1:77316002-77316021 MsG0180004386.01.T01:CDS 45.0%
CATACTTCAACAACAGCAGC+TGG - Chr1:77315846-77315865 MsG0180004386.01.T01:CDS 45.0%
CATTCTCAACCCATCACACA+TGG - Chr1:77315301-77315320 MsG0180004386.01.T01:CDS 45.0%
CTCTAATGCAGAGGAAAGAG+TGG + Chr1:77315334-77315353 None:intergenic 45.0%
GAATCCCTCAAAAATGCACC+AGG - Chr1:77315468-77315487 MsG0180004386.01.T01:CDS 45.0%
GCCTACAAATGTTCCTGTGT+TGG - Chr1:77316717-77316736 MsG0180004386.01.T01:CDS 45.0%
GCTACGGCATCTTCATACAA+AGG + Chr1:77316068-77316087 None:intergenic 45.0%
GGGACTCTTACACTTGGAAA+TGG - Chr1:77316230-77316249 MsG0180004386.01.T01:CDS 45.0%
GGGTAGTTAAGATCCAAGGA+AGG + Chr1:77317120-77317139 None:intergenic 45.0%
GTGTGATTGACACAGGAGTT+TGG - Chr1:77315616-77315635 MsG0180004386.01.T01:CDS 45.0%
TACGAATCAACACTAGGTGC+TGG + Chr1:77316613-77316632 None:intergenic 45.0%
! AGCAGCAACACCTTTTGCAT+TGG - Chr1:77316942-77316961 MsG0180004386.01.T01:CDS 45.0%
! ATCGACTCCGTCAGATATTG+CGG + Chr1:77316012-77316031 None:intergenic 45.0%
! GCAGCAACACCTTTTGCATT+GGG - Chr1:77316943-77316962 MsG0180004386.01.T01:CDS 45.0%
!! GTGATGGGTTGAGAATGCTT+TGG + Chr1:77315298-77315317 None:intergenic 45.0%
AACAGTGGCTGGTGGAACTA+TGG - Chr1:77316193-77316212 MsG0180004386.01.T01:CDS 50.0%
AACTCCACACGTGACACAGA+AGG - Chr1:77315813-77315832 MsG0180004386.01.T01:CDS 50.0%
AAGCGCCTATGTTGGGATTG+AGG + Chr1:77315560-77315579 None:intergenic 50.0%
ACACGTGACACAGAAGGTCA+TGG - Chr1:77315819-77315838 MsG0180004386.01.T01:CDS 50.0%
ACCCGGTACTTCGATCTTAG+CGG - Chr1:77316690-77316709 MsG0180004386.01.T01:CDS 50.0%
ATCATGCCAAGCGCCTATGT+TGG + Chr1:77315568-77315587 None:intergenic 50.0%
ATGACCTTCTGTGTCACGTG+TGG + Chr1:77315820-77315839 None:intergenic 50.0%
ATTGGAGCCCAGCAGCTATT+CGG - Chr1:77316848-77316867 MsG0180004386.01.T01:CDS 50.0%
CCAGCCACTGTTATAACCCA+AGG + Chr1:77316185-77316204 None:intergenic 50.0%
CCAGGGTCAAGTGCTCTATT+AGG + Chr1:77316985-77317004 None:intergenic 50.0%
CCTTGGGTTATAACAGTGGC+TGG - Chr1:77316182-77316201 MsG0180004386.01.T01:CDS 50.0%
CTATGTTGGGATTGAGGCCA+AGG + Chr1:77315554-77315573 None:intergenic 50.0%
CTTGGCCTCAATCCCAACAT+AGG - Chr1:77315552-77315571 MsG0180004386.01.T01:CDS 50.0%
GGATTGAGGCCAAGGAATTG+AGG + Chr1:77315546-77315565 None:intergenic 50.0%
GTACTTCGATCTTAGCGGCA+TGG - Chr1:77316695-77316714 MsG0180004386.01.T01:CDS 50.0%
TATGCAGCTGGAACAGCTTC+AGG - Chr1:77315900-77315919 MsG0180004386.01.T01:CDS 50.0%
TCAATCCCAACATAGGCGCT+TGG - Chr1:77315559-77315578 MsG0180004386.01.T01:CDS 50.0%
TCATGCCAAGCGCCTATGTT+GGG + Chr1:77315567-77315586 None:intergenic 50.0%
TGACCAGCTCCCAATGCAAA+AGG + Chr1:77316955-77316974 None:intergenic 50.0%
TGCCGCTAAGATCGAAGTAC+CGG + Chr1:77316695-77316714 None:intergenic 50.0%
TGCTTGTCCGTCACCAACAT+TGG + Chr1:77317214-77317233 None:intergenic 50.0%
TGGGTTATAACAGTGGCTGG+TGG - Chr1:77316185-77316204 MsG0180004386.01.T01:CDS 50.0%
TTGAGGCTGGTGACCACAAT+AGG + Chr1:77317426-77317445 None:intergenic 50.0%
! ACACCTTTTGCATTGGGAGC+TGG - Chr1:77316949-77316968 MsG0180004386.01.T01:CDS 50.0%
! CCTAATAGAGCACTTGACCC+TGG - Chr1:77316982-77317001 MsG0180004386.01.T01:CDS 50.0%
ATGGCGTGTCCTCATGTTGC+AGG - Chr1:77316793-77316812 MsG0180004386.01.T01:CDS 55.0%
ATTGCCGACCGAATAGCTGC+TGG + Chr1:77316859-77316878 None:intergenic 55.0%
GTACCGGGTGCAGTAATGTC+AGG + Chr1:77316679-77316698 None:intergenic 55.0%
TTGCCGACCGAATAGCTGCT+GGG + Chr1:77316858-77316877 None:intergenic 55.0%
! GCCGCTAAGATCGAAGTACC+GGG + Chr1:77316694-77316713 None:intergenic 55.0%
! TCCTCATGTTGCAGGTGTCG+CGG - Chr1:77316801-77316820 MsG0180004386.01.T01:CDS 55.0%
GAGCCCAGCAGCTATTCGGT+CGG - Chr1:77316852-77316871 MsG0180004386.01.T01:CDS 60.0%
!! GGTGTCGCGGCGCTTTTGAA+AGG - Chr1:77316814-77316833 MsG0180004386.01.T01:CDS 60.0%
GCCGCGACACCTGCAACATG+AGG + Chr1:77316805-77316824 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77315291 77317458 77315291 ID=MsG0180004386.01;Name=MsG0180004386.01
Chr1 mRNA 77315291 77317458 77315291 ID=MsG0180004386.01.T01;Parent=MsG0180004386.01;Name=MsG0180004386.01.T01;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|1|2|0|684
Chr1 exon 77316376 77317458 77316376 ID=MsG0180004386.01.T01:exon:12813;Parent=MsG0180004386.01.T01
Chr1 exon 77315291 77316262 77315291 ID=MsG0180004386.01.T01:exon:12812;Parent=MsG0180004386.01.T01
Chr1 CDS 77316376 77317458 77316376 ID=MsG0180004386.01.T01:cds;Parent=MsG0180004386.01.T01
Chr1 CDS 77315291 77316262 77315291 ID=MsG0180004386.01.T01:cds;Parent=MsG0180004386.01.T01
Gene Sequence

>MsG0180004386.01.T01

ATGCCCAAAGCATTCTCAACCCATCACACATGGTATTTATCCACTCTTTCCTCTGCATTAGAGAATCCTCAACTCACAACAACCAATAATCTCAACTCTCCAATTTCTTCTAAGTTAATTTACACCTACACACATGTCATAAATGGTTTTAGTGCTAACTTATCACCAAAAGAACATGAATCCCTCAAAAATGCACCAGGTTACATTTCATCTATAAGAGATTTACACATGAAACTGGACACAACACATTCACCTCAATTCCTTGGCCTCAATCCCAACATAGGCGCTTGGCATGATTCAAAGTTCGGTAAAGACGTAATTGTTGGTGTGATTGACACAGGAGTTTGGCCAGAAAGTGAGAGCTTCAAAGATGATGGAATGACTAAAATTCCTTCAAAATGGAAAGGACAATGTGAAAATAGCATTCATTTCAATTCATCTCTTTGCAACAAGAAACTCATTGGAGCTAAATTCTTCAACAAAGGATTATTAGCAAAATATCCTAACATCACCTTAGGATTAAACTCCACACGTGACACAGAAGGTCATGGAACTCATACTTCAACAACAGCAGCTGGAAGCAGAGTTGACCATGCATCATTCTTTGGTTATGCAGCTGGAACAGCTTCAGGAATAGCTTCAAAATCGCGTGTCGCGATGTATAAAGCTATATGGCAAGGTCCATTAGTAACATCTGATGTAATAGCTGCAATTGACGCCGCAATATCTGACGGAGTCGATGTTATTTCATTATCATTTGGAATTAATGACGTGCCTTTGTATGAAGATGCCGTAGCTATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCAGGAAATAATGGACCAGCCCTTAAAACATTACACAATGGAACACCTTGGGTTATAACAGTGGCTGGTGGAACTATGGATAGAGATTTTCAAGGGACTCTTACACTTGGAAATGGTAACAAAATCATAGGATTGTCTCTTTATGTAGGAACATTTTCTACACAACATGTTCCAATTGTTTTCATGGATTTATGTGACAATTTTAATGAATTGAAAAAAGTGAAAAGCAAGATTATAAATAGCTTTGCAACCATCATTGTTAATCCAATAAATGGTGAAATTGTCAAAGCTTACATCAAAAGTAGTAACTCTACTTCAATTGCAAGCATGTCTTTCATGAAAACAGTTTTTGGAACTAAACCAGCACCTAGTGTTGATTCGTATAGTTCAAGAGGGCCATCATATAGTTGTCCATTCGTGTTGAAACCTGACATTACTGCACCCGGTACTTCGATCTTAGCGGCATGGCCTACAAATGTTCCTGTGTTGGAATTTGAGTCTCAAAAACATTTCAGCGAATTCAATGTGATAAGTGGAACATCTATGGCGTGTCCTCATGTTGCAGGTGTCGCGGCGCTTTTGAAAGGAGTGCATAGTGATTGGAGCCCAGCAGCTATTCGGTCGGCAATAATGACAACATCAGACATATTTGATAATGCTAAGGAACACATCAAAGACATTGGAACAGACAAAGCAGCAACACCTTTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTGAATCTTCTTTGTGCACTTAAATACTCACAAAAAAACATCACTACCATCACAAGATCCTCTTCCAATGATTGCTCTAAACCTTCCTTGGATCTTAACTACCCTTCTTTTATTGCTTTTGTCAATGATGGAAATTCTTCTTCAAGGCCGATACAAGAATTTCATAGAACAGTTACCAATGTTGGTGACGGACAAGCAATTTATGTTGCTAGCATTGCACCAATTAAAGGGTTTCGTGTCACTGTTATCCCAAACAAGTTGGTGTTTAATGAGAAGAATGAGAAGCTAAGCTACAAATTGAGGATTGAAGTTGCAAGTATGACAAAATTAAAGAAAGTGGCTTTTGGATATCTAACATGGATGGATGTGAAGCATGTTGTTAGAAGTCCTATTGTGGTCACCAGCCTCAAATTGAAATTCTAG

Protein sequence

>MsG0180004386.01.T01

MPKAFSTHHTWYLSTLSSALENPQLTTTNNLNSPISSKLIYTYTHVINGFSANLSPKEHESLKNAPGYISSIRDLHMKLDTTHSPQFLGLNPNIGAWHDSKFGKDVIVGVIDTGVWPESESFKDDGMTKIPSKWKGQCENSIHFNSSLCNKKLIGAKFFNKGLLAKYPNITLGLNSTRDTEGHGTHTSTTAAGSRVDHASFFGYAAGTASGIASKSRVAMYKAIWQGPLVTSDVIAAIDAAISDGVDVISLSFGINDVPLYEDAVAIATFAAMEKGVFVSTSAGNNGPALKTLHNGTPWVITVAGGTMDRDFQGTLTLGNGNKIIGLSLYVGTFSTQHVPIVFMDLCDNFNELKKVKSKIINSFATIIVNPINGEIVKAYIKSSNSTSIASMSFMKTVFGTKPAPSVDSYSSRGPSYSCPFVLKPDITAPGTSILAAWPTNVPVLEFESQKHFSEFNVISGTSMACPHVAGVAALLKGVHSDWSPAAIRSAIMTTSDIFDNAKEHIKDIGTDKAATPFALGAGHVNPNRALDPGLVYDVGVQDYVNLLCALKYSQKNITTITRSSSNDCSKPSLDLNYPSFIAFVNDGNSSSRPIQEFHRTVTNVGDGQAIYVASIAPIKGFRVTVIPNKLVFNEKNEKLSYKLRIEVASMTKLKKVAFGYLTWMDVKHVVRSPIVVTSLKLKF*