Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089640 | XP_013470094.1 | 96.354 | 768 | 27 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089640 | sp|Q28C44|C19L2_XENTR | 40.780 | 282 | 154 | 7 | 491 | 763 | 645 | 922 | 3.74e-59 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089640 | A0A072VQQ5 | 96.354 | 768 | 27 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031180 | Msa0089640 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
| Msa0054820 | Msa0089640 | 0.812471 | 4.170459e-51 | -8.615850e-47 |
| Msa0078480 | Msa0089640 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0089640 | Msa0100160 | 0.815497 | 8.968740e-52 | -8.615850e-47 |
| Msa0089640 | Msa0143850 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
| Msa0089640 | Msa0169610 | 0.806267 | 8.939546e-50 | -8.615850e-47 |
| Msa0089640 | Msa0170570 | 0.801965 | 7.018548e-49 | -8.615850e-47 |
| Msa0089640 | Msa0171120 | 0.812437 | 4.242427e-51 | -8.615850e-47 |
| Msa0089640 | Msa0183050 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa0089640 | Msa0218350 | 0.805035 | 1.621338e-49 | -8.615850e-47 |
| Msa0089640 | Msa0237200 | 0.825976 | 3.494521e-54 | -8.615850e-47 |
| Msa0089640 | Msa0237210 | 0.800002 | 1.767794e-48 | -8.615850e-47 |
| Msa0089640 | Msa0249310 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0089640 | Msa0274970 | 0.826582 | 2.507153e-54 | -8.615850e-47 |
| Msa0089640 | Msa0287790 | 0.819418 | 1.173776e-52 | -8.615850e-47 |
| Msa0089640 | Msa0308440 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
| Msa0089640 | Msa0311720 | 0.814172 | 1.763739e-51 | -8.615850e-47 |
| Msa0089640 | Msa0315680 | 0.822773 | 1.979801e-53 | -8.615850e-47 |
| Msa0089640 | Msa0324240 | 0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa0089640 | Msa0339910 | 0.829235 | 5.765312e-55 | -8.615850e-47 |
| Msa0089640 | Msa0376280 | 0.819128 | 1.366364e-52 | -8.615850e-47 |
| Msa0089640 | Msa0377450 | 0.802734 | 4.875553e-49 | -8.615850e-47 |
| Msa0089640 | Msa0378970 | 0.816696 | 4.840621e-52 | -8.615850e-47 |
| Msa0089640 | Msa0474940 | 0.810321 | 1.221812e-50 | -8.615850e-47 |
| Msa0089640 | Msa0480780 | 0.809647 | 1.706431e-50 | -8.615850e-47 |
| Msa0089640 | Msa0483740 | 0.804699 | 1.905269e-49 | -8.615850e-47 |
| Msa0089640 | Msa0516120 | 0.813888 | 2.037826e-51 | -8.615850e-47 |
| Msa0089640 | Msa0517640 | 0.800871 | 1.176124e-48 | -8.615850e-47 |
| Msa0089640 | Msa0557320 | 0.814948 | 1.187798e-51 | -8.615850e-47 |
| Msa0089640 | Msa0558230 | 0.811168 | 8.010703e-51 | -8.615850e-47 |
| Msa0089640 | Msa0612960 | 0.800283 | 1.549934e-48 | -8.615850e-47 |
| Msa0089640 | Msa0620230 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0089640 | Msa0624060 | 0.812612 | 3.884584e-51 | -8.615850e-47 |
| Msa0089640 | Msa0652690 | 0.813830 | 2.098894e-51 | -8.615850e-47 |
| Msa0089640 | Msa0656960 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
| Msa0089640 | Msa0676130 | 0.810241 | 1.270923e-50 | -8.615850e-47 |
| Msa0089640 | Msa0676180 | 0.806699 | 7.247610e-50 | -8.615850e-47 |
| Msa0089640 | Msa0713870 | 0.805249 | 1.462388e-49 | -8.615850e-47 |
| Msa0089640 | Msa0752700 | 0.811905 | 5.540578e-51 | -8.615850e-47 |
| Msa0089640 | Msa0794970 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
| Msa0089640 | Msa0831100 | 0.825833 | 3.777329e-54 | -8.615850e-47 |
| Msa0089640 | Msa0880450 | 0.800015 | 1.757407e-48 | -8.615850e-47 |
| Msa0089640 | Msa0945240 | 0.808958 | 2.398337e-50 | -8.615850e-47 |
| Msa0089640 | Msa1009750 | 0.804929 | 1.706394e-49 | -8.615850e-47 |
| Msa0089640 | Msa1041210 | 0.813825 | 2.104265e-51 | -8.615850e-47 |
| Msa0089640 | Msa1079860 | 0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0089640 | Msa1080270 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
| Msa0089640 | Msa1097820 | 0.808459 | 3.064805e-50 | -8.615850e-47 |
| Msa0089640 | Msa1165740 | 0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0089640 | Msa1199570 | 0.813930 | 1.994271e-51 | -8.615850e-47 |
| Msa0089640 | Msa1328640 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa0089640 | Msa1328710 | 0.803156 | 3.988248e-49 | -8.615850e-47 |
| Msa0089640 | Msa1356610 | 0.819694 | 1.015429e-52 | -8.615850e-47 |
| Msa0089640 | Msa1359560 | 0.823949 | 1.051349e-53 | -8.615850e-47 |
| Msa0089640 | Msa1378410 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
| Msa0089640 | Msa1389880 | 0.805037 | 1.619347e-49 | -8.615850e-47 |
| Msa0089640 | Msa1437330 | 0.801340 | 9.431825e-49 | -8.615850e-47 |
| Msa0089640 | Msa1449520 | 0.804833 | 1.786478e-49 | -8.615850e-47 |
| Msa0089640 | Msa1450720 | 0.828890 | 6.989683e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089640 | MtrunA17_Chr1g0208311 | 96.354 | 768 | 27 | 1 | 1 | 768 | 1 | 767 | 0.0 | 1518 |
| Msa0089640 | MtrunA17_Chr4g0071211 | 24.111 | 253 | 185 | 5 | 508 | 759 | 202 | 448 | 1.04e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089640 | AT1G56290.1 | 58.648 | 636 | 227 | 12 | 151 | 765 | 72 | 692 | 0.0 | 728 |
| Msa0089640 | AT5G56900.3 | 25.472 | 318 | 212 | 11 | 450 | 759 | 200 | 500 | 1.17e-15 | 81.3 |
| Msa0089640 | AT5G56900.1 | 25.472 | 318 | 212 | 11 | 450 | 759 | 101 | 401 | 1.82e-15 | 79.7 |
| Msa0089640 | AT5G56900.2 | 25.472 | 318 | 212 | 11 | 450 | 759 | 293 | 593 | 2.19e-15 | 80.5 |
Find 226 sgRNAs with CRISPR-Local
Find 610 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACCACTTCTTCTTTC+TGG | 0.127155 | 1_2:-71242562 | None:intergenic |
| CATTGGTAATATGCTGATTT+TGG | 0.157883 | 1_2:-71249625 | None:intergenic |
| AATGCAGAACAAGCAGTTTA+AGG | 0.165236 | 1_2:+71246601 | Msa0089640:CDS |
| TAAATCTAGAAAATGCTTTC+TGG | 0.175819 | 1_2:+71242259 | Msa0089640:exon |
| GATAATGAATCTTGCACTTT+AGG | 0.203429 | 1_2:-71245644 | None:intergenic |
| AGATGGCAGTGATGGTTCTT+TGG | 0.217013 | 1_2:+71242731 | Msa0089640:CDS |
| AAAAGAGGCAACGTTCTTTC+TGG | 0.231869 | 1_2:-71246748 | None:intergenic |
| CTATCCAACGGGATTCTAAA+AGG | 0.246272 | 1_2:+71245430 | Msa0089640:CDS |
| TTCTATCGTCCTCCCTTGTT+GGG | 0.271017 | 1_2:+71244839 | Msa0089640:CDS |
| AGCCTCTTTAGCAACATCTT+TGG | 0.273963 | 1_2:-71247544 | None:intergenic |
| TTAACTCCATCCCTTTCTTC+TGG | 0.275995 | 1_2:-71244799 | None:intergenic |
| CCAAATTCTACATGAAAATA+AGG | 0.288504 | 1_2:-71249219 | None:intergenic |
| GTCAAAATGATCCCAGTCTT+TGG | 0.291825 | 1_2:-71249406 | None:intergenic |
| GCCTCTTTAGCAACATCTTT+GGG | 0.302529 | 1_2:-71247543 | None:intergenic |
| ATCAGATATTAGGAGGAAAA+AGG | 0.309597 | 1_2:+71242464 | Msa0089640:CDS |
| TAACTCCGATGGCTCTGTTT+TGG | 0.313770 | 1_2:+71245796 | Msa0089640:CDS |
| CTTCTATCGTCCTCCCTTGT+TGG | 0.323231 | 1_2:+71244838 | Msa0089640:CDS |
| TGAAATAGTTGCTATGTAAT+AGG | 0.326984 | 1_2:+71249646 | Msa0089640:three_prime_UTR |
| ACAAGATGCATAGGCCGATT+TGG | 0.336873 | 1_2:-71246782 | None:intergenic |
| CGATATTGCAAGAAAAGAAA+TGG | 0.349250 | 1_2:+71242827 | Msa0089640:CDS |
| ACTCGTATCAATGAGTCTTT+TGG | 0.351937 | 1_2:-71249160 | None:intergenic |
| CTGACCTTCTTAAAGTATAA+AGG | 0.363032 | 1_2:-71247567 | None:intergenic |
| AAATCTAGAAAATGCTTTCT+GGG | 0.367835 | 1_2:+71242260 | Msa0089640:exon |
| TTAAATAAATTTGCTAATGA+TGG | 0.373787 | 1_2:+71245737 | Msa0089640:CDS |
| GGCGCTACTGCCGGAGAATA+GGG | 0.375127 | 1_2:-71241727 | None:intergenic |
| TGGTCCTTCGTGGTCGTATG+AGG | 0.375612 | 1_2:-71241886 | None:intergenic |
| GATGGCAGTGATGGTTCTTT+GGG | 0.376486 | 1_2:+71242732 | Msa0089640:CDS |
| TTACATAGCAACTATTTCAT+TGG | 0.378411 | 1_2:-71249642 | None:intergenic |
| AAGGAGTTTAAGAGTAGTCT+TGG | 0.378970 | 1_2:+71249279 | Msa0089640:CDS |
| TGATTGATTGATTACCTTAG+TGG | 0.383881 | 1_2:-71241937 | None:intergenic |
| TAACTCCATCCCTTTCTTCT+GGG | 0.389734 | 1_2:-71244798 | None:intergenic |
| CTTCCATCATCCTTTAGATA+AGG | 0.393080 | 1_2:-71244769 | None:intergenic |
| GGTGGTGGTAGCCTGGTAGG+AGG | 0.400738 | 1_2:-71241702 | None:intergenic |
| CATTAGAGGCATGCTGCATT+TGG | 0.401828 | 1_2:+71249311 | Msa0089640:CDS |
| AGAAATTAAACTCACGTGAA+TGG | 0.401995 | 1_2:-71246882 | None:intergenic |
| CTTGGGTTGAATGTCATTAG+AGG | 0.406348 | 1_2:+71249297 | Msa0089640:CDS |
| TAGTGGTAGTTTCAATTTGT+TGG | 0.408991 | 1_2:-71241920 | None:intergenic |
| ACGGAGAGAAAACTAATAGA+AGG | 0.409896 | 1_2:-71241807 | None:intergenic |
| CAGTGGCAGCCCGTGGTGCC+TGG | 0.410325 | 1_2:+71246842 | Msa0089640:CDS |
| CACCCTCAGCTACAGCAAAC+TGG | 0.415469 | 1_2:-71245685 | None:intergenic |
| AGAGAAGGAAGGAGAGGTTG+TGG | 0.416741 | 1_2:-71241751 | None:intergenic |
| GATATTGCCAGAGGAGGTTC+CGG | 0.417230 | 1_2:+71242908 | Msa0089640:CDS |
| AAAGAGGCAACGTTCTTTCT+GGG | 0.420692 | 1_2:-71246747 | None:intergenic |
| AAGTGCAAGATTCATTATCT+TGG | 0.421374 | 1_2:+71245648 | Msa0089640:CDS |
| AGGCGCTACTGCCGGAGAAT+AGG | 0.422443 | 1_2:-71241728 | None:intergenic |
| GGAGAAAGGTGGGGTTCTCT+TGG | 0.424757 | 1_2:+71245291 | Msa0089640:CDS |
| TCCTTTGTTTCTGAAACAGC+TGG | 0.426347 | 1_2:-71242885 | None:intergenic |
| CAAAAGTCACGTACAAAAGA+TGG | 0.426378 | 1_2:+71242771 | Msa0089640:CDS |
| GCCAGAGGAGGTTCCGGTTG+AGG | 0.427345 | 1_2:+71242914 | Msa0089640:CDS |
| CCGGGCTTTATGAGAATCAT+AGG | 0.428496 | 1_2:+71249597 | Msa0089640:three_prime_UTR |
| CTTTAGGTGCTTTCATTTCA+CGG | 0.429416 | 1_2:-71245628 | None:intergenic |
| CTAAGACATACCTCCTCAAC+CGG | 0.430215 | 1_2:-71242927 | None:intergenic |
| ATTTGTTGGAGGCTGCAAAT+TGG | 0.431946 | 1_2:-71241906 | None:intergenic |
| GCATGGCCTTAGCTGCCAAC+TGG | 0.432433 | 1_2:-71245904 | None:intergenic |
| TCCTCAACCGGAACCTCCTC+TGG | 0.432540 | 1_2:-71242915 | None:intergenic |
| TAAAGCAGCTGCACCAGCTC+GGG | 0.436695 | 1_2:+71245338 | Msa0089640:CDS |
| TGGATAGGCTTATCAGAATC+TGG | 0.438375 | 1_2:-71245414 | None:intergenic |
| AACTAGCATCTCTTGGCAAT+TGG | 0.448076 | 1_2:-71249537 | None:intergenic |
| TCTTCTTCAGATGGCAGTGA+TGG | 0.448835 | 1_2:+71242723 | Msa0089640:CDS |
| GAAATTAAACTCACGTGAAT+GGG | 0.449576 | 1_2:-71246881 | None:intergenic |
| GGCTCCTTTATACTTTAAGA+AGG | 0.451038 | 1_2:+71247563 | Msa0089640:CDS |
| TCGTCCTCCCTTGTTGGGGA+TGG | 0.451524 | 1_2:+71244844 | Msa0089640:CDS |
| TTAGCAACATCTTTGGGTAC+AGG | 0.452375 | 1_2:-71247537 | None:intergenic |
| AGAAGGGTGTAGAATGGTAG+TGG | 0.454953 | 1_2:-71241790 | None:intergenic |
| TGCAAACCAGTTGGCAGCTA+AGG | 0.457599 | 1_2:+71245898 | Msa0089640:CDS |
| AGATAAGGATTCAATTCCTT+AGG | 0.459784 | 1_2:-71244754 | None:intergenic |
| TTCTGATAAGCCTATCCAAC+GGG | 0.465145 | 1_2:+71245419 | Msa0089640:CDS |
| ACCCAAAGATGTTGCTAAAG+AGG | 0.465690 | 1_2:+71247542 | Msa0089640:CDS |
| TGCAAGAAAAGAAATGGGAT+TGG | 0.466865 | 1_2:+71242833 | Msa0089640:CDS |
| AACTCTACAAACCTGGTCAC+GGG | 0.470379 | 1_2:-71242296 | None:intergenic |
| TGGTAGTTTCAATTTGTTGG+AGG | 0.472309 | 1_2:-71241917 | None:intergenic |
| TGGGATTGGATTGGATGCTT+AGG | 0.475574 | 1_2:+71242847 | Msa0089640:CDS |
| AGGGAAGTTCTAGTTCTAGA+AGG | 0.477096 | 1_2:+71246212 | Msa0089640:CDS |
| TGAAGAAGCTGATAGACTAA+TGG | 0.482397 | 1_2:+71245949 | Msa0089640:CDS |
| GAAAAGAAATGGGATTGGAT+TGG | 0.486728 | 1_2:+71242838 | Msa0089640:CDS |
| GGCTGCAAATTGGTCCTTCG+TGG | 0.490644 | 1_2:-71241896 | None:intergenic |
| TCACCAGGTATGTCTACATC+TGG | 0.490912 | 1_2:-71245845 | None:intergenic |
| AATCCTTATCTAAAGGATGA+TGG | 0.493135 | 1_2:+71244766 | Msa0089640:CDS |
| TGCTTAGGTCTGAAAGTAAG+AGG | 0.494397 | 1_2:+71242862 | Msa0089640:CDS |
| ACAGGTTGTGGGAGAAAGGT+GGG | 0.494592 | 1_2:+71245281 | Msa0089640:intron |
| GGTTGTGGAGGCGCTACTGC+CGG | 0.497188 | 1_2:-71241736 | None:intergenic |
| AGGAGTTTAAGAGTAGTCTT+GGG | 0.500080 | 1_2:+71249280 | Msa0089640:CDS |
| CAATATAACTCGTTTATGCC+CGG | 0.500626 | 1_2:+71249578 | Msa0089640:three_prime_UTR |
| ACGGTCAAGGAGTGGTAAAA+AGG | 0.500765 | 1_2:+71242677 | Msa0089640:CDS |
| TAGCCTGGTAGGAGGGGAAG+AGG | 0.505328 | 1_2:-71241694 | None:intergenic |
| GATATTGCAAGAAAAGAAAT+GGG | 0.506087 | 1_2:+71242828 | Msa0089640:CDS |
| GGAATTGAATCCTTATCTAA+AGG | 0.506348 | 1_2:+71244759 | Msa0089640:CDS |
| TGAAAATAAGGAAAGCCCTT+GGG | 0.506574 | 1_2:-71249207 | None:intergenic |
| CTAGGTACAAGATGAGGACT+TGG | 0.508187 | 1_2:+71242410 | Msa0089640:intron |
| GAAATTCATTCCCCGTGACC+AGG | 0.508309 | 1_2:+71242285 | Msa0089640:CDS |
| TTCCCTCTTCCCCTCCTACC+AGG | 0.509970 | 1_2:+71241691 | Msa0089640:five_prime_UTR |
| TCTTGAAACTGTGATGGGAT+TGG | 0.510705 | 1_2:+71247479 | Msa0089640:CDS |
| ACAAGATGAGGACTTGGATA+AGG | 0.511436 | 1_2:+71242416 | Msa0089640:CDS |
| ACGTACAGGTTGTGGGAGAA+AGG | 0.512724 | 1_2:+71245277 | Msa0089640:intron |
| TCCTTTCAAACGAAGTTGCA+TGG | 0.513085 | 1_2:-71245921 | None:intergenic |
| GTGTAGAATGGTAGTGGAGT+GGG | 0.514840 | 1_2:-71241784 | None:intergenic |
| GCCATGCAACTTCGTTTGAA+AGG | 0.516217 | 1_2:+71245920 | Msa0089640:CDS |
| TCCTCCCTTGTTGGGGATGG+AGG | 0.516820 | 1_2:+71244847 | Msa0089640:CDS |
| CTAAAGCAGCTGCACCAGCT+CGG | 0.518101 | 1_2:+71245337 | Msa0089640:CDS |
| ATGAAAATAAGGAAAGCCCT+TGG | 0.518426 | 1_2:-71249208 | None:intergenic |
| GAAGTGGTTACCCAGAAGAA+AGG | 0.519164 | 1_2:+71244788 | Msa0089640:CDS |
| GCCTTCGTTTCTTATCATCC+CGG | 0.519609 | 1_2:-71242629 | None:intergenic |
| CCATGTTATTGATGATGAAA+AGG | 0.522343 | 1_2:+71249260 | Msa0089640:CDS |
| GTGGAGAAACTAGCATCTCT+TGG | 0.526001 | 1_2:-71249544 | None:intergenic |
| GCCAGCTGTTTCAGAAACAA+AGG | 0.526710 | 1_2:+71242884 | Msa0089640:CDS |
| ATATCTTCTGAGCAGAAGAA+AGG | 0.527325 | 1_2:+71246542 | Msa0089640:CDS |
| TTGGATTCTCTAGACAAAAG+AGG | 0.527728 | 1_2:-71246763 | None:intergenic |
| CCTATGATTCTCATAAAGCC+CGG | 0.528167 | 1_2:-71249597 | None:intergenic |
| GCAGTTTAAGGTTTATACTC+AGG | 0.528525 | 1_2:+71246613 | Msa0089640:CDS |
| TAGGGACGGTGGTGGTAGCC+TGG | 0.529328 | 1_2:-71241709 | None:intergenic |
| ACGTCAAAGGTACGAGAAAG+TGG | 0.530885 | 1_2:+71249353 | Msa0089640:CDS |
| GTGGGCTGCGAAAGGAGAGA+AGG | 0.536204 | 1_2:-71241766 | None:intergenic |
| TATCCAACGGGATTCTAAAA+GGG | 0.536857 | 1_2:+71245431 | Msa0089640:CDS |
| GTGGTGGTAGCCTGGTAGGA+GGG | 0.537963 | 1_2:-71241701 | None:intergenic |
| CAACTGAAAGTGAAAGCGAC+CGG | 0.538228 | 1_2:+71242610 | Msa0089640:CDS |
| TTGGTGGGCAGGAAGAGGCA+AGG | 0.538902 | 1_2:+71246137 | Msa0089640:intron |
| GTCAAAGAAGGCAAATCCTA+AGG | 0.538930 | 1_2:+71244738 | Msa0089640:intron |
| GACGGTGGTGGTAGCCTGGT+AGG | 0.540095 | 1_2:-71241705 | None:intergenic |
| TGGTGGGCAGGAAGAGGCAA+GGG | 0.540113 | 1_2:+71246138 | Msa0089640:intron |
| GTAGAATTTGGTCTAAACAA+AGG | 0.541254 | 1_2:+71249231 | Msa0089640:CDS |
| GAAGACTCTTCTTCTTCAGA+TGG | 0.541678 | 1_2:+71242714 | Msa0089640:CDS |
| GCAGCAACGGAGGCATTGCA+TGG | 0.542294 | 1_2:+71247503 | Msa0089640:CDS |
| CAGCAATGACCAGGCACCAC+GGG | 0.542710 | 1_2:-71246851 | None:intergenic |
| TGATGGGATTGGCGCAGCAA+CGG | 0.543497 | 1_2:+71247490 | Msa0089640:CDS |
| ACAAATTGAAACTACCACTA+AGG | 0.544779 | 1_2:+71241923 | Msa0089640:five_prime_UTR |
| ACTAATAGAAGGGTGTAGAA+TGG | 0.546084 | 1_2:-71241796 | None:intergenic |
| TTTGTCTAGAGAATCCAAAT+CGG | 0.546300 | 1_2:+71246768 | Msa0089640:CDS |
| GGTCCTTCGTGGTCGTATGA+GGG | 0.546367 | 1_2:-71241885 | None:intergenic |
| TTCATTTCACGGTCCCGAGA+AGG | 0.548726 | 1_2:-71245617 | None:intergenic |
| TATGGATACGTACAGGTTGT+GGG | 0.551919 | 1_2:+71245270 | Msa0089640:intron |
| CTCATTGATACGAGTCAGAA+GGG | 0.552831 | 1_2:+71249168 | Msa0089640:CDS |
| AATATAACTCGTTTATGCCC+GGG | 0.554488 | 1_2:+71249579 | Msa0089640:three_prime_UTR |
| AGGCATGCTGCATTTGGCTG+AGG | 0.559862 | 1_2:+71249317 | Msa0089640:CDS |
| TAACTCTACAAACCTGGTCA+CGG | 0.560136 | 1_2:-71242297 | None:intergenic |
| AAGTGGTTACCCAGAAGAAA+GGG | 0.560758 | 1_2:+71244789 | Msa0089640:CDS |
| TATCTAAAGGATGATGGAAG+TGG | 0.562789 | 1_2:+71244772 | Msa0089640:CDS |
| TCTATCGTCCTCCCTTGTTG+GGG | 0.563715 | 1_2:+71244840 | Msa0089640:CDS |
| GAAATTAGATCAAGAACTGA+GGG | 0.565433 | 1_2:+71246193 | Msa0089640:CDS |
| CTTATCAAGCTGATCATCAT+CGG | 0.566051 | 1_2:-71242526 | None:intergenic |
| TGATAAGAAACGAAGGCGGA+AGG | 0.566477 | 1_2:+71242635 | Msa0089640:CDS |
| TATGCGTGAGTTAGTTAGCA+AGG | 0.567223 | 1_2:+71245766 | Msa0089640:CDS |
| GTATGAGGGCGGAGGCGCAA+TGG | 0.569010 | 1_2:-71241871 | None:intergenic |
| GATGAATATGACTTTGAGAC+TGG | 0.570613 | 1_2:+71246641 | Msa0089640:CDS |
| ATGGTTCTTTGGGTCGCCAA+CGG | 0.574425 | 1_2:+71242742 | Msa0089640:CDS |
| AAGATATGTGAAATTTGCAA+TGG | 0.574800 | 1_2:-71246810 | None:intergenic |
| AGCCTGGTAGGAGGGGAAGA+GGG | 0.577166 | 1_2:-71241693 | None:intergenic |
| CCACCACCGTCCCTATTCTC+CGG | 0.577362 | 1_2:+71241717 | Msa0089640:five_prime_UTR |
| CTCTCCGTCTCGAAAACGCA+AGG | 0.577826 | 1_2:+71241822 | Msa0089640:five_prime_UTR |
| TCGTGGTCGTATGAGGGCGG+AGG | 0.578997 | 1_2:-71241879 | None:intergenic |
| TTGCTCCTCCATCCCCAACA+AGG | 0.579676 | 1_2:-71244852 | None:intergenic |
| GCATGTAGATGAGCCCGAGC+TGG | 0.580752 | 1_2:-71245351 | None:intergenic |
| TACAGGTTGTGGGAGAAAGG+TGG | 0.581114 | 1_2:+71245280 | Msa0089640:intron |
| AGTGTTTCTTGAAACTGTGA+TGG | 0.581708 | 1_2:+71247473 | Msa0089640:CDS |
| AACTGAAAGTGAAAGCGACC+GGG | 0.581958 | 1_2:+71242611 | Msa0089640:CDS |
| TTTACGCAACTCAATTCCCA+AGG | 0.582185 | 1_2:+71249191 | Msa0089640:CDS |
| CTATAAGAAGCAGACAAAGA+GGG | 0.582737 | 1_2:+71245373 | Msa0089640:CDS |
| AAGCCAGTTTGCTGTAGCTG+AGG | 0.582994 | 1_2:+71245682 | Msa0089640:CDS |
| TTGGGGATGGAGGAGCAAGT+TGG | 0.583549 | 1_2:+71244857 | Msa0089640:CDS |
| AGAAAAGAGATGGACGGTCA+AGG | 0.584062 | 1_2:+71242664 | Msa0089640:CDS |
| TGGTGGTAGCCTGGTAGGAG+GGG | 0.585144 | 1_2:-71241700 | None:intergenic |
| TGGGATTGGCGCAGCAACGG+AGG | 0.587679 | 1_2:+71247493 | Msa0089640:CDS |
| TTATATTGTTACATTACATG+TGG | 0.592631 | 1_2:-71249563 | None:intergenic |
| TTGATGAAGCAGAAGATGAG+TGG | 0.593008 | 1_2:+71249124 | Msa0089640:CDS |
| ACTCATTGATACGAGTCAGA+AGG | 0.593762 | 1_2:+71249167 | Msa0089640:CDS |
| GGTGTAGAATGGTAGTGGAG+TGG | 0.594123 | 1_2:-71241785 | None:intergenic |
| GTAGTGGAGTGGGCTGCGAA+AGG | 0.596008 | 1_2:-71241774 | None:intergenic |
| CTATGATTCTCATAAAGCCC+GGG | 0.596074 | 1_2:-71249596 | None:intergenic |
| AAAAGTCACGTACAAAAGAT+GGG | 0.596199 | 1_2:+71242772 | Msa0089640:CDS |
| ACTTTCCAAAACAGAGCCAT+CGG | 0.600722 | 1_2:-71245801 | None:intergenic |
| GCTATAAGAAGCAGACAAAG+AGG | 0.602039 | 1_2:+71245372 | Msa0089640:CDS |
| AGCCAGTTTGCTGTAGCTGA+GGG | 0.602459 | 1_2:+71245683 | Msa0089640:CDS |
| AGCGGAGAGAACAAGATCAA+AGG | 0.603131 | 1_2:+71242795 | Msa0089640:CDS |
| AACGGTGGATGATAATGTGT+GGG | 0.603348 | 1_2:+71247389 | Msa0089640:CDS |
| AAGGGTCCAGAAAGAAGAAG+TGG | 0.604306 | 1_2:+71242556 | Msa0089640:CDS |
| GATAAGAAACGAAGGCGGAA+GGG | 0.605462 | 1_2:+71242636 | Msa0089640:CDS |
| TGCTCCTCCATCCCCAACAA+GGG | 0.605665 | 1_2:-71244851 | None:intergenic |
| GAAGGAAGGAGAGGTTGTGG+AGG | 0.608121 | 1_2:-71241748 | None:intergenic |
| CAAGAGCAAGCAGCTCGAGA+AGG | 0.610525 | 1_2:+71244904 | Msa0089640:CDS |
| TGAAATTAGATCAAGAACTG+AGG | 0.611462 | 1_2:+71246192 | Msa0089640:CDS |
| CGGAGAGAAAACTAATAGAA+GGG | 0.611734 | 1_2:-71241806 | None:intergenic |
| ATGGACACAACAAGATGCAT+AGG | 0.612176 | 1_2:-71246791 | None:intergenic |
| CCGGAGAATAGGGACGGTGG+TGG | 0.613702 | 1_2:-71241717 | None:intergenic |
| TAACATGAGTGCAAACCAGT+TGG | 0.614285 | 1_2:+71245889 | Msa0089640:CDS |
| TCTCCAGATGTAGACATACC+TGG | 0.614683 | 1_2:+71245842 | Msa0089640:CDS |
| AATCTAGAAAATGCTTTCTG+GGG | 0.620178 | 1_2:+71242261 | Msa0089640:exon |
| ATTCAAGGTATGCTATGCAG+AGG | 0.622462 | 1_2:+71246519 | Msa0089640:intron |
| TCACGTACAAAAGATGGGAG+CGG | 0.624007 | 1_2:+71242777 | Msa0089640:CDS |
| AGAGGAGGTTCCGGTTGAGG+AGG | 0.624945 | 1_2:+71242917 | Msa0089640:CDS |
| CATATCTTATGTTGCCACAG+TGG | 0.629694 | 1_2:+71246825 | Msa0089640:CDS |
| GGCACCACGGGCTGCCACTG+TGG | 0.630244 | 1_2:-71246839 | None:intergenic |
| GTGTTTCTTGAAACTGTGAT+GGG | 0.635016 | 1_2:+71247474 | Msa0089640:CDS |
| GTTTAAGGTTTATACTCAGG+CGG | 0.637491 | 1_2:+71246616 | Msa0089640:CDS |
| TTACGCAACTCAATTCCCAA+GGG | 0.637688 | 1_2:+71249192 | Msa0089640:CDS |
| TATAAGAAGCAGACAAAGAG+GGG | 0.639918 | 1_2:+71245374 | Msa0089640:CDS |
| GTTGCCACAGTGGCAGCCCG+TGG | 0.646274 | 1_2:+71246835 | Msa0089640:CDS |
| TCCTCCATCCCCAACAAGGG+AGG | 0.647544 | 1_2:-71244848 | None:intergenic |
| ACTCTACAAACCTGGTCACG+GGG | 0.649268 | 1_2:-71242295 | None:intergenic |
| GAAAGGAGAGAAGGAAGGAG+AGG | 0.651468 | 1_2:-71241757 | None:intergenic |
| GGTTACCCAGAAGAAAGGGA+TGG | 0.651690 | 1_2:+71244793 | Msa0089640:CDS |
| GCTGCGAAAGGAGAGAAGGA+AGG | 0.652121 | 1_2:-71241762 | None:intergenic |
| GCATGAATCAGCTACAAGAA+CGG | 0.655856 | 1_2:+71247371 | Msa0089640:intron |
| CCTTCGTGGTCGTATGAGGG+CGG | 0.656420 | 1_2:-71241882 | None:intergenic |
| GAAAGGGATGGAGTTAACGT+TGG | 0.656584 | 1_2:+71244805 | Msa0089640:CDS |
| AAAGGAGATATTGCCAGAGG+AGG | 0.656762 | 1_2:+71242902 | Msa0089640:CDS |
| AGAGATGGACGGTCAAGGAG+TGG | 0.659421 | 1_2:+71242669 | Msa0089640:CDS |
| AAGGAGAGTAGTAACTCCGA+TGG | 0.660069 | 1_2:+71245785 | Msa0089640:CDS |
| GGTAAAATACAGCAATGACC+AGG | 0.660836 | 1_2:-71246860 | None:intergenic |
| ATTCTGATAAGCCTATCCAA+CGG | 0.661452 | 1_2:+71245418 | Msa0089640:CDS |
| CTACTGCCGGAGAATAGGGA+CGG | 0.665267 | 1_2:-71241723 | None:intergenic |
| TTCTGAGCAGAAGAAAGGAG+AGG | 0.665761 | 1_2:+71246547 | Msa0089640:CDS |
| CAGGTTGTGGGAGAAAGGTG+GGG | 0.667439 | 1_2:+71245282 | Msa0089640:intron |
| AAGACATGTATAGACGTCAA+AGG | 0.668527 | 1_2:+71249340 | Msa0089640:CDS |
| TATATACTAGGTACAAGATG+AGG | 0.672250 | 1_2:+71242404 | Msa0089640:intron |
| TGGCAGTTCACGCAACAGAG+TGG | 0.672423 | 1_2:-71241851 | None:intergenic |
| ACAGCAATGACCAGGCACCA+CGG | 0.673584 | 1_2:-71246852 | None:intergenic |
| AACAAAGGAGATATTGCCAG+AGG | 0.685554 | 1_2:+71242899 | Msa0089640:CDS |
| TGAATCAGCTACAAGAACGG+TGG | 0.687115 | 1_2:+71247374 | Msa0089640:CDS |
| CCGCCCTCATACGACCACGA+AGG | 0.691488 | 1_2:+71241882 | Msa0089640:five_prime_UTR |
| ACCGGGATGATAAGAAACGA+AGG | 0.693258 | 1_2:+71242628 | Msa0089640:CDS |
| AGAAGGACGAAGCTGCCAAG+AGG | 0.694798 | 1_2:+71244921 | Msa0089640:CDS |
| CTGCCGGAGAATAGGGACGG+TGG | 0.697098 | 1_2:-71241720 | None:intergenic |
| AAGAGTAGAAAGAAGCAAGG+AGG | 0.698813 | 1_2:+71246674 | Msa0089640:CDS |
| GAACGGTGGATGATAATGTG+TGG | 0.714664 | 1_2:+71247388 | Msa0089640:CDS |
| ACGGTGGATGATAATGTGTG+GGG | 0.723750 | 1_2:+71247390 | Msa0089640:CDS |
| TCAAAGGTACGAGAAAGTGG+AGG | 0.744298 | 1_2:+71249356 | Msa0089640:CDS |
| GGGATGATAAGAAACGAAGG+CGG | 0.769963 | 1_2:+71242631 | Msa0089640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAATAGTTAAAATTT+GGG | + | chr1_2:71241955-71241974 | Msa0089640:intron | 10.0% |
| !! | TTTATTTAAAAAATTGAACA+TGG | - | chr1_2:71242152-71242171 | None:intergenic | 10.0% |
| !!! | TATTTTAAAGATAGATAAAA+AGG | + | chr1_2:71243097-71243116 | Msa0089640:intron | 10.0% |
| !!! | ATTTTAAAGATAGATAAAAA+GGG | + | chr1_2:71243098-71243117 | Msa0089640:intron | 10.0% |
| !!! | TTTTCAAAAAAAAAACAATA+CGG | - | chr1_2:71244232-71244251 | None:intergenic | 10.0% |
| !! | CAATCAAAATAGTTAAAATT+TGG | + | chr1_2:71241954-71241973 | Msa0089640:intron | 15.0% |
| !! | AACACGAATAAATTAATTAA+TGG | - | chr1_2:71242214-71242233 | None:intergenic | 15.0% |
| !! | AAAGAAAAAAATCAGATATT+AGG | + | chr1_2:71242454-71242473 | Msa0089640:CDS | 15.0% |
| !!! | TAACTATTTAAGTTAGATTT+AGG | + | chr1_2:71243249-71243268 | Msa0089640:intron | 15.0% |
| !!! | AACTATTTAAGTTAGATTTA+GGG | + | chr1_2:71243250-71243269 | Msa0089640:intron | 15.0% |
| !! | TGTCTTATATTATTTATGTT+TGG | + | chr1_2:71244437-71244456 | Msa0089640:intron | 15.0% |
| !!! | CAGAATAATAACATTTTTAT+AGG | - | chr1_2:71244992-71245011 | None:intergenic | 15.0% |
| !! | AAAAATGTTATTATTCTGTT+AGG | + | chr1_2:71244994-71245013 | Msa0089640:intron | 15.0% |
| !!! | TTAAATAAATTTGCTAATGA+TGG | + | chr1_2:71245737-71245756 | Msa0089640:CDS | 15.0% |
| !! | ATATAATTGATTAAGTTCTT+TGG | + | chr1_2:71246985-71247004 | Msa0089640:intron | 15.0% |
| !! | TAATTTAACCAATTTCAATA+AGG | - | chr1_2:71247068-71247087 | None:intergenic | 15.0% |
| !!! | TAAGACATTTTTTGAAATTT+CGG | - | chr1_2:71247422-71247441 | None:intergenic | 15.0% |
| !! | ATATATTATTATGAGAAATG+CGG | + | chr1_2:71247826-71247845 | Msa0089640:intron | 15.0% |
| !! | AATGAAGTGATAATACAATT+AGG | - | chr1_2:71242177-71242196 | None:intergenic | 20.0% |
| !!! | TGTTATTCTTTCCTATTTTT+CGG | + | chr1_2:71242347-71242366 | Msa0089640:intron | 20.0% |
| !!! | ATCTGATTTTTTTCTTTCTT+TGG | - | chr1_2:71242451-71242470 | None:intergenic | 20.0% |
| !! | AGCTTGATAAGATAAAAAAA+GGG | + | chr1_2:71242538-71242557 | Msa0089640:CDS | 20.0% |
| !!! | AAGAAATTTTATCTTAGGAA+TGG | - | chr1_2:71243375-71243394 | None:intergenic | 20.0% |
| !!! | AAAGGAAGAAATTTTATCTT+AGG | - | chr1_2:71243380-71243399 | None:intergenic | 20.0% |
| !!! | AATTTTCCTTTAATATTGAG+TGG | - | chr1_2:71243557-71243576 | None:intergenic | 20.0% |
| !! | TATTGGATTATTCTATCATA+TGG | - | chr1_2:71243850-71243869 | None:intergenic | 20.0% |
| !! | CTAAATCTCTCTTAATTATT+TGG | - | chr1_2:71243907-71243926 | None:intergenic | 20.0% |
| !!! | GAGAGATTTAGATATAATTT+TGG | + | chr1_2:71243916-71243935 | Msa0089640:intron | 20.0% |
| !!! | GTTCTTTTAACATGTTATAT+TGG | - | chr1_2:71244643-71244662 | None:intergenic | 20.0% |
| !!! | TTCTTTTGACATGTTATATT+GGG | - | chr1_2:71244693-71244712 | None:intergenic | 20.0% |
| !! | TAGAATGAAATAATATCAAC+AGG | - | chr1_2:71245169-71245188 | None:intergenic | 20.0% |
| !! | ATTGAACGTTAATTAAAGAA+CGG | - | chr1_2:71245230-71245249 | None:intergenic | 20.0% |
| !! | TTCTTAATGTATTCACTATA+TGG | + | chr1_2:71245252-71245271 | Msa0089640:intron | 20.0% |
| !! | ACTTAATAAAAATAATCACG+AGG | - | chr1_2:71246095-71246114 | None:intergenic | 20.0% |
| !! | ATACATGAAACAAATATGTA+GGG | - | chr1_2:71246282-71246301 | None:intergenic | 20.0% |
| !! | AATACATGAAACAAATATGT+AGG | - | chr1_2:71246283-71246302 | None:intergenic | 20.0% |
| !! | CATATTTGTTTCATGTATTT+CGG | + | chr1_2:71246284-71246303 | Msa0089640:intron | 20.0% |
| !!! | ATCTTTTTTTGGATATTCTT+GGG | - | chr1_2:71246707-71246726 | None:intergenic | 20.0% |
| !! | AAAAAAAGATGAATGCAAAT+CGG | + | chr1_2:71246717-71246736 | Msa0089640:CDS | 20.0% |
| !! | ACTTAATCAATTATATTGCA+GGG | - | chr1_2:71246981-71247000 | None:intergenic | 20.0% |
| !! | AACTTAATCAATTATATTGC+AGG | - | chr1_2:71246982-71247001 | None:intergenic | 20.0% |
| !! | ATTTGATACCTTATTGAAAT+TGG | + | chr1_2:71247057-71247076 | Msa0089640:intron | 20.0% |
| !! | TTGAAATTGGTTAAATTACA+TGG | + | chr1_2:71247070-71247089 | Msa0089640:intron | 20.0% |
| !! | AGTAACCTTAAGATATATAA+TGG | + | chr1_2:71247233-71247252 | Msa0089640:intron | 20.0% |
| !! | ATTCACCATTATATATCTTA+AGG | - | chr1_2:71247241-71247260 | None:intergenic | 20.0% |
| !!! | ATGGTGAATTAAATTTTAAG+TGG | + | chr1_2:71247252-71247271 | Msa0089640:intron | 20.0% |
| !! | TATATTATTATGAGAAATGC+GGG | + | chr1_2:71247827-71247846 | Msa0089640:intron | 20.0% |
| !!! | ACACTATAATTACTAACTTT+TGG | + | chr1_2:71247984-71248003 | Msa0089640:intron | 20.0% |
| !!! | CACTATAATTACTAACTTTT+GGG | + | chr1_2:71247985-71248004 | Msa0089640:intron | 20.0% |
| !!! | ACTATAATTACTAACTTTTG+GGG | + | chr1_2:71247986-71248005 | Msa0089640:intron | 20.0% |
| !!! | TAAATGCTTGATAATTTACA+TGG | - | chr1_2:71248141-71248160 | None:intergenic | 20.0% |
| !!! | TGTATGGTTAAAACTTTTTA+AGG | - | chr1_2:71248360-71248379 | None:intergenic | 20.0% |
| !!! | ACATCTAGTTTTTTTTTTTG+GGG | - | chr1_2:71248545-71248564 | None:intergenic | 20.0% |
| !!! | GACATCTAGTTTTTTTTTTT+GGG | - | chr1_2:71248546-71248565 | None:intergenic | 20.0% |
| !!! | TGACATCTAGTTTTTTTTTT+TGG | - | chr1_2:71248547-71248566 | None:intergenic | 20.0% |
| !! | AAAAACTAGATGTCAAATAA+AGG | + | chr1_2:71248552-71248571 | Msa0089640:intron | 20.0% |
| !!! | TTTCATCTTATTTTGTTTTG+CGG | + | chr1_2:71248791-71248810 | Msa0089640:intron | 20.0% |
| !! | TTGAAACACAATTGAAATAA+TGG | - | chr1_2:71249057-71249076 | None:intergenic | 20.0% |
| !! | GATTGAAGCAAATTTAAAAA+CGG | - | chr1_2:71249096-71249115 | None:intergenic | 20.0% |
| !! | TTATATTGTTACATTACATG+TGG | - | chr1_2:71249566-71249585 | None:intergenic | 20.0% |
| !!! | ATTTATTCGTGTTTTTTTGC+AGG | + | chr1_2:71242221-71242240 | Msa0089640:intron | 25.0% |
| ! | TAAATCTAGAAAATGCTTTC+TGG | + | chr1_2:71242259-71242278 | Msa0089640:exon | 25.0% |
| ! | AAATCTAGAAAATGCTTTCT+GGG | + | chr1_2:71242260-71242279 | Msa0089640:exon | 25.0% |
| ! | GAAAAAAATCAGATATTAGG+AGG | + | chr1_2:71242457-71242476 | Msa0089640:CDS | 25.0% |
| ! | CAGCTTGATAAGATAAAAAA+AGG | + | chr1_2:71242537-71242556 | Msa0089640:CDS | 25.0% |
| ! | TAAAAAGGAATATACATCTG+AGG | + | chr1_2:71242692-71242711 | Msa0089640:CDS | 25.0% |
| !! | CATTTCTTTTCTTGCAATAT+CGG | - | chr1_2:71242829-71242848 | None:intergenic | 25.0% |
| ! | GATATTGCAAGAAAAGAAAT+GGG | + | chr1_2:71242828-71242847 | Msa0089640:CDS | 25.0% |
| !!! | AAATTCTAAGATTAATGCCA+TGG | - | chr1_2:71243230-71243249 | None:intergenic | 25.0% |
| !!! | TCCTTTTTTTATTCCACAAA+GGG | - | chr1_2:71243291-71243310 | None:intergenic | 25.0% |
| !!! | TTCCTTTTTTTATTCCACAA+AGG | - | chr1_2:71243292-71243311 | None:intergenic | 25.0% |
| ! | ATGTATCCCTATAACTTAAA+GGG | - | chr1_2:71243443-71243462 | None:intergenic | 25.0% |
| ! | CAAAACAACTGTAAGATAAA+AGG | + | chr1_2:71243467-71243486 | Msa0089640:intron | 25.0% |
| ! | TAAAAGGAGATATAAACCAT+AGG | + | chr1_2:71243483-71243502 | Msa0089640:intron | 25.0% |
| ! | AAGTATAGTTACTCATTTGT+AGG | - | chr1_2:71243679-71243698 | None:intergenic | 25.0% |
| ! | ATACTTATACAAGACAATGT+AGG | + | chr1_2:71243693-71243712 | Msa0089640:intron | 25.0% |
| !! | TTTTGGATTTGATTCAAGAT+CGG | + | chr1_2:71243933-71243952 | Msa0089640:intron | 25.0% |
| ! | AGCAATAACTAATGAGTAAA+TGG | + | chr1_2:71244276-71244295 | Msa0089640:intron | 25.0% |
| ! | TGTTATCCAAAAACTGAAAA+AGG | + | chr1_2:71244316-71244335 | Msa0089640:intron | 25.0% |
| !! | GTTCTTTTGACATGTTATAT+TGG | - | chr1_2:71244694-71244713 | None:intergenic | 25.0% |
| !! | TTCTTTCTTTTAGTCAAAGA+AGG | + | chr1_2:71244726-71244745 | Msa0089640:intron | 25.0% |
| ! | AATGAAATAATATCAACAGG+AGG | - | chr1_2:71245166-71245185 | None:intergenic | 25.0% |
| ! | GTTCTTTAATTAACGTTCAA+TGG | + | chr1_2:71245229-71245248 | Msa0089640:intron | 25.0% |
| ! | ACATAAAAAATACTCCTTCT+CGG | + | chr1_2:71245603-71245622 | Msa0089640:CDS | 25.0% |
| ! | TGAACAAAAAAATAATCACG+AGG | - | chr1_2:71246061-71246080 | None:intergenic | 25.0% |
| !!! | TTTTCCATTATTGTTTTGGT+GGG | + | chr1_2:71246122-71246141 | Msa0089640:intron | 25.0% |
| ! | TACATGAAACAAATATGTAG+GGG | - | chr1_2:71246281-71246300 | None:intergenic | 25.0% |
| ! | ATGCATAAATTTGTAGAAAC+CGG | - | chr1_2:71246455-71246474 | None:intergenic | 25.0% |
| ! | TACCTTTCTTATGATTTCAA+TGG | + | chr1_2:71246482-71246501 | Msa0089640:intron | 25.0% |
| !! | GTGACATTTTACTTTATTCA+AGG | + | chr1_2:71246504-71246523 | Msa0089640:intron | 25.0% |
| !!! | TCTTTTTTTGGATATTCTTG+GGG | - | chr1_2:71246706-71246725 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTTGGATATTCT+TGG | - | chr1_2:71246708-71246727 | None:intergenic | 25.0% |
| !!! | GATTTGCATTCATCTTTTTT+TGG | - | chr1_2:71246718-71246737 | None:intergenic | 25.0% |
| ! | AAGATATGTGAAATTTGCAA+TGG | - | chr1_2:71246813-71246832 | None:intergenic | 25.0% |
| ! | AATTGATTAAGTTCTTTGGT+CGG | + | chr1_2:71246989-71247008 | Msa0089640:intron | 25.0% |
| ! | TTGTAATATTATTGCGTGTT+CGG | + | chr1_2:71247097-71247116 | Msa0089640:intron | 25.0% |
| !!! | TCAGTTGATTTGTATCATAA+CGG | + | chr1_2:71247291-71247310 | Msa0089640:intron | 25.0% |
| ! | TAGATGAATAGTTCATTTCA+AGG | - | chr1_2:71247672-71247691 | None:intergenic | 25.0% |
| ! | AATTATCTACAGAGTTTCTT+TGG | + | chr1_2:71248041-71248060 | Msa0089640:intron | 25.0% |
| ! | TTTGACATTTCATCAAAGAA+GGG | - | chr1_2:71248070-71248089 | None:intergenic | 25.0% |
| ! | ATTTGACATTTCATCAAAGA+AGG | - | chr1_2:71248071-71248090 | None:intergenic | 25.0% |
| ! | ATAGTATTCAAACTGCAAAT+TGG | + | chr1_2:71248093-71248112 | Msa0089640:intron | 25.0% |
| !!! | ATCTAGTTTTTTTTTTTGGG+GGG | - | chr1_2:71248543-71248562 | None:intergenic | 25.0% |
| !!! | CATCTAGTTTTTTTTTTTGG+GGG | - | chr1_2:71248544-71248563 | None:intergenic | 25.0% |
| ! | ATTTAAATCAAACTCAACGT+GGG | - | chr1_2:71248657-71248676 | None:intergenic | 25.0% |
| ! | AATTTAAATCAAACTCAACG+TGG | - | chr1_2:71248658-71248677 | None:intergenic | 25.0% |
| !! | AAATTCACAAGCTTTTAAAC+TGG | + | chr1_2:71248673-71248692 | Msa0089640:intron | 25.0% |
| ! | TAAGATGAAACCATTTAAAC+TGG | - | chr1_2:71248781-71248800 | None:intergenic | 25.0% |
| ! | ATCATATAATGACATAGTTC+AGG | - | chr1_2:71248838-71248857 | None:intergenic | 25.0% |
| !! | TTTAAATTTGCTTCAATCAC+AGG | + | chr1_2:71249098-71249117 | Msa0089640:intron | 25.0% |
| ! | CCAAATTCTACATGAAAATA+AGG | - | chr1_2:71249222-71249241 | None:intergenic | 25.0% |
| !!! | CCTTATTTTCATGTAGAATT+TGG | + | chr1_2:71249219-71249238 | Msa0089640:CDS | 25.0% |
| ! | TTACATAGCAACTATTTCAT+TGG | - | chr1_2:71249645-71249664 | None:intergenic | 25.0% |
| ! | TGAAATAGTTGCTATGTAAT+AGG | + | chr1_2:71249646-71249665 | Msa0089640:three_prime_UTR | 25.0% |
| TAGTGGTAGTTTCAATTTGT+TGG | - | chr1_2:71241923-71241942 | None:intergenic | 30.0% | |
| ACAAATTGAAACTACCACTA+AGG | + | chr1_2:71241923-71241942 | Msa0089640:five_prime_UTR | 30.0% | |
| TGATTGATTGATTACCTTAG+TGG | - | chr1_2:71241940-71241959 | None:intergenic | 30.0% | |
| CATAAACCTAATATAGAGAG+AGG | - | chr1_2:71242083-71242102 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGCAGGCATTAGTA+AGG | + | chr1_2:71242232-71242251 | Msa0089640:intron | 30.0% |
| AATCTAGAAAATGCTTTCTG+GGG | + | chr1_2:71242261-71242280 | Msa0089640:exon | 30.0% | |
| TATATACTAGGTACAAGATG+AGG | + | chr1_2:71242404-71242423 | Msa0089640:intron | 30.0% | |
| ATCAGATATTAGGAGGAAAA+AGG | + | chr1_2:71242464-71242483 | Msa0089640:CDS | 30.0% | |
| AAGGGAAAAAAGAAAAGAGA+TGG | + | chr1_2:71242654-71242673 | Msa0089640:CDS | 30.0% | |
| GAAAAAAGAAAAGAGATGGA+CGG | + | chr1_2:71242658-71242677 | Msa0089640:CDS | 30.0% | |
| AAAAGTCACGTACAAAAGAT+GGG | + | chr1_2:71242772-71242791 | Msa0089640:CDS | 30.0% | |
| CGATATTGCAAGAAAAGAAA+TGG | + | chr1_2:71242827-71242846 | Msa0089640:CDS | 30.0% | |
| ! | GAGAAACTTTTGTGTCTATA+TGG | + | chr1_2:71243133-71243152 | Msa0089640:intron | 30.0% |
| TACTATCTTTCATTGATGAG+TGG | - | chr1_2:71243166-71243185 | None:intergenic | 30.0% | |
| CTCATCAATGAAAGATAGTA+TGG | + | chr1_2:71243166-71243185 | Msa0089640:intron | 30.0% | |
| TAAGATTAATGCCATGGTAT+TGG | - | chr1_2:71243224-71243243 | None:intergenic | 30.0% | |
| GAATGGTGTATTCAAAACAT+TGG | - | chr1_2:71243358-71243377 | None:intergenic | 30.0% | |
| ! | AGCATTTCCCTTTAAGTTAT+AGG | + | chr1_2:71243433-71243452 | Msa0089640:intron | 30.0% |
| ! | GCATTTCCCTTTAAGTTATA+GGG | + | chr1_2:71243434-71243453 | Msa0089640:intron | 30.0% |
| GATGTATCCCTATAACTTAA+AGG | - | chr1_2:71243444-71243463 | None:intergenic | 30.0% | |
| GGAAAATTGTATCACAGTTT+AGG | + | chr1_2:71243569-71243588 | Msa0089640:intron | 30.0% | |
| ATATAGAGTTTAATGTCACG+CGG | + | chr1_2:71243604-71243623 | Msa0089640:intron | 30.0% | |
| ATACAAGACAATGTAGGATT+TGG | + | chr1_2:71243699-71243718 | Msa0089640:intron | 30.0% | |
| AATTATCGCAGATGAAGTTT+GGG | + | chr1_2:71243727-71243746 | Msa0089640:intron | 30.0% | |
| ! | TGGTAATGTTCTGTCTTAAA+TGG | + | chr1_2:71243771-71243790 | Msa0089640:intron | 30.0% |
| TAGAATAATCCAATAGTCAG+TGG | + | chr1_2:71243855-71243874 | Msa0089640:intron | 30.0% | |
| ATCTACAATACATCTGCATT+GGG | - | chr1_2:71244084-71244103 | None:intergenic | 30.0% | |
| TATCTACAATACATCTGCAT+TGG | - | chr1_2:71244085-71244104 | None:intergenic | 30.0% | |
| CAACTTCAAATATTATGCCA+AGG | + | chr1_2:71244173-71244192 | Msa0089640:intron | 30.0% | |
| ! | CCAAAAACTGAAAAAGGTAT+CGG | + | chr1_2:71244322-71244341 | Msa0089640:intron | 30.0% |
| TGAAGTATGATTTAAGCCTT+TGG | + | chr1_2:71244380-71244399 | Msa0089640:intron | 30.0% | |
| TAAGCTGCAAACAAAATGAA+GGG | - | chr1_2:71244598-71244617 | None:intergenic | 30.0% | |
| ATAAGCTGCAAACAAAATGA+AGG | - | chr1_2:71244599-71244618 | None:intergenic | 30.0% | |
| AGATAAGGATTCAATTCCTT+AGG | - | chr1_2:71244757-71244776 | None:intergenic | 30.0% | |
| GGAATTGAATCCTTATCTAA+AGG | + | chr1_2:71244759-71244778 | Msa0089640:CDS | 30.0% | |
| AATCCTTATCTAAAGGATGA+TGG | + | chr1_2:71244766-71244785 | Msa0089640:CDS | 30.0% | |
| AAAGAATGTGTGAAAAGCAA+GGG | - | chr1_2:71244954-71244973 | None:intergenic | 30.0% | |
| TAAAGAATGTGTGAAAAGCA+AGG | - | chr1_2:71244955-71244974 | None:intergenic | 30.0% | |
| ! | CATTTTTATAGGATAGACAG+AGG | - | chr1_2:71244981-71245000 | None:intergenic | 30.0% |
| TATTATTCTGTTAGGACAGA+AGG | + | chr1_2:71245002-71245021 | Msa0089640:intron | 30.0% | |
| TAGAGGGAAGATAATTAGTT+TGG | + | chr1_2:71245042-71245061 | Msa0089640:intron | 30.0% | |
| ! | AGAGGGAAGATAATTAGTTT+GGG | + | chr1_2:71245043-71245062 | Msa0089640:intron | 30.0% |
| ACGTTAATTAAAGAACGGAA+TGG | - | chr1_2:71245225-71245244 | None:intergenic | 30.0% | |
| GAATTTCGCTTATGAAATAC+TGG | + | chr1_2:71245573-71245592 | Msa0089640:intron | 30.0% | |
| CATAAAAAATACTCCTTCTC+GGG | + | chr1_2:71245604-71245623 | Msa0089640:CDS | 30.0% | |
| GATAATGAATCTTGCACTTT+AGG | - | chr1_2:71245647-71245666 | None:intergenic | 30.0% | |
| AAGTGCAAGATTCATTATCT+TGG | + | chr1_2:71245648-71245667 | Msa0089640:CDS | 30.0% | |
| !!! | TGTTTTGGAAAGTTTTGAAG+CGG | + | chr1_2:71245811-71245830 | Msa0089640:CDS | 30.0% |
| ! | GTGCTTTTCCATTATTGTTT+TGG | + | chr1_2:71246118-71246137 | Msa0089640:intron | 30.0% |
| !!! | CTTTTCCATTATTGTTTTGG+TGG | + | chr1_2:71246121-71246140 | Msa0089640:intron | 30.0% |
| TGAAATTAGATCAAGAACTG+AGG | + | chr1_2:71246192-71246211 | Msa0089640:CDS | 30.0% | |
| GAAATTAGATCAAGAACTGA+GGG | + | chr1_2:71246193-71246212 | Msa0089640:CDS | 30.0% | |
| CACCATTGAAATCATAAGAA+AGG | - | chr1_2:71246487-71246506 | None:intergenic | 30.0% | |
| ! | TTCTTTCTACTCTTTTTGCT+TGG | - | chr1_2:71246668-71246687 | None:intergenic | 30.0% |
| AAAAAGAGTAGAAAGAAGCA+AGG | + | chr1_2:71246671-71246690 | Msa0089640:CDS | 30.0% | |
| TTTGTCTAGAGAATCCAAAT+CGG | + | chr1_2:71246768-71246787 | Msa0089640:CDS | 30.0% | |
| GAAATTAAACTCACGTGAAT+GGG | - | chr1_2:71246884-71246903 | None:intergenic | 30.0% | |
| AGAAATTAAACTCACGTGAA+TGG | - | chr1_2:71246885-71246904 | None:intergenic | 30.0% | |
| !!! | AAGCTTATGGTTTTTTCAAC+TGG | - | chr1_2:71246939-71246958 | None:intergenic | 30.0% |
| ATAAACCATATTTGGATCCA+AGG | - | chr1_2:71247129-71247148 | None:intergenic | 30.0% | |
| GCTCTATCATAAACCATATT+TGG | - | chr1_2:71247137-71247156 | None:intergenic | 30.0% | |
| ! | TGGTTTATGATAGAGCATTA+TGG | + | chr1_2:71247141-71247160 | Msa0089640:intron | 30.0% |
| TGATTCATGCTGTCATATTA+AGG | - | chr1_2:71247361-71247380 | None:intergenic | 30.0% | |
| CTGACCTTCTTAAAGTATAA+AGG | - | chr1_2:71247570-71247589 | None:intergenic | 30.0% | |
| !! | TATAAGAAAAGCACTGATTC+TGG | - | chr1_2:71247644-71247663 | None:intergenic | 30.0% |
| ! | GAATGTATTCAGAGCATTTA+AGG | + | chr1_2:71247849-71247868 | Msa0089640:intron | 30.0% |
| CCTTATTATAGAAACGCTAT+GGG | - | chr1_2:71247910-71247929 | None:intergenic | 30.0% | |
| ACCTTATTATAGAAACGCTA+TGG | - | chr1_2:71247911-71247930 | None:intergenic | 30.0% | |
| AAAAAGTTGACAAACACACA+AGG | - | chr1_2:71248173-71248192 | None:intergenic | 30.0% | |
| ! | TTGTGTGTTTGTCAACTTTT+TGG | + | chr1_2:71248172-71248191 | Msa0089640:intron | 30.0% |
| ! | TGTGTGTTTGTCAACTTTTT+GGG | + | chr1_2:71248173-71248192 | Msa0089640:intron | 30.0% |
| ACTTAGAGAAAGATGACATT+AGG | + | chr1_2:71248232-71248251 | Msa0089640:intron | 30.0% | |
| ! | ACCTTTTGGTATCAAATTTG+TGG | - | chr1_2:71248305-71248324 | None:intergenic | 30.0% |
| TCAATATAGAGTAATGAAGC+AGG | - | chr1_2:71248336-71248355 | None:intergenic | 30.0% | |
| TAGATGTCAAATAAAGGACA+GGG | + | chr1_2:71248558-71248577 | Msa0089640:intron | 30.0% | |
| AACCACATCATGTATAAAAC+TGG | + | chr1_2:71248744-71248763 | Msa0089640:intron | 30.0% | |
| !! | ATCCAGTTTTATACATGATG+TGG | - | chr1_2:71248749-71248768 | None:intergenic | 30.0% |
| TCAGTTTCTACCAGTTTAAA+TGG | + | chr1_2:71248768-71248787 | Msa0089640:intron | 30.0% | |
| !! | TAAGTTTTAATGACCACATG+TGG | - | chr1_2:71248879-71248898 | None:intergenic | 30.0% |
| TGATATTCCAGTATAGCATT+TGG | + | chr1_2:71248986-71249005 | Msa0089640:intron | 30.0% | |
| ! | TTTTTCACCAAATGCTATAC+TGG | - | chr1_2:71248996-71249015 | None:intergenic | 30.0% |
| GAAGCAAATTTAAAAACGGA+CGG | - | chr1_2:71249092-71249111 | None:intergenic | 30.0% | |
| GTAGAATTTGGTCTAAACAA+AGG | + | chr1_2:71249231-71249250 | Msa0089640:CDS | 30.0% | |
| ! | CCTTTTCATCATCAATAACA+TGG | - | chr1_2:71249263-71249282 | None:intergenic | 30.0% |
| !! | CCATGTTATTGATGATGAAA+AGG | + | chr1_2:71249260-71249279 | Msa0089640:CDS | 30.0% |
| !!! | CATTGGTAATATGCTGATTT+TGG | - | chr1_2:71249628-71249647 | None:intergenic | 30.0% |
| ! | ACTAATAGAAGGGTGTAGAA+TGG | - | chr1_2:71241799-71241818 | None:intergenic | 35.0% |
| CGGAGAGAAAACTAATAGAA+GGG | - | chr1_2:71241809-71241828 | None:intergenic | 35.0% | |
| ACGGAGAGAAAACTAATAGA+AGG | - | chr1_2:71241810-71241829 | None:intergenic | 35.0% | |
| !! | TGGTAGTTTCAATTTGTTGG+AGG | - | chr1_2:71241920-71241939 | None:intergenic | 35.0% |
| TGATTGATTGATCCTGCAAT+TGG | + | chr1_2:71242004-71242023 | Msa0089640:intron | 35.0% | |
| GATTGATTGATCCTGCAATT+GGG | + | chr1_2:71242005-71242024 | Msa0089640:intron | 35.0% | |
| ATTGATTGATCCTGCAATTG+GGG | + | chr1_2:71242006-71242025 | Msa0089640:intron | 35.0% | |
| AATCGACCTCTCTCTATATT+AGG | + | chr1_2:71242074-71242093 | Msa0089640:intron | 35.0% | |
| GCAAAATCAGACCGAAAAAT+AGG | - | chr1_2:71242361-71242380 | None:intergenic | 35.0% | |
| GTTACTGCGTTGTATATACT+AGG | + | chr1_2:71242392-71242411 | Msa0089640:intron | 35.0% | |
| TTAGGAGGAAAAAGGATAAG+AGG | + | chr1_2:71242472-71242491 | Msa0089640:CDS | 35.0% | |
| AGGAAAAAGGATAAGAGGAA+AGG | + | chr1_2:71242477-71242496 | Msa0089640:CDS | 35.0% | |
| GGAAAAAGGATAAGAGGAAA+GGG | + | chr1_2:71242478-71242497 | Msa0089640:CDS | 35.0% | |
| CTTATCAAGCTGATCATCAT+CGG | - | chr1_2:71242529-71242548 | None:intergenic | 35.0% | |
| TGAATACCACTTCTTCTTTC+TGG | - | chr1_2:71242565-71242584 | None:intergenic | 35.0% | |
| ! | CATCTTTTGTACGTGACTTT+TGG | - | chr1_2:71242773-71242792 | None:intergenic | 35.0% |
| CAAAAGTCACGTACAAAAGA+TGG | + | chr1_2:71242771-71242790 | Msa0089640:CDS | 35.0% | |
| TGCAAGAAAAGAAATGGGAT+TGG | + | chr1_2:71242833-71242852 | Msa0089640:CDS | 35.0% | |
| GAAAAGAAATGGGATTGGAT+TGG | + | chr1_2:71242838-71242857 | Msa0089640:CDS | 35.0% | |
| GCCCTTTGTGGAATAAAAAA+AGG | + | chr1_2:71243287-71243306 | Msa0089640:intron | 35.0% | |
| ACTTAAAGGGAAATGCTAAC+AGG | - | chr1_2:71243430-71243449 | None:intergenic | 35.0% | |
| ! | TGTTTGGATTTTGGATCCTA+TGG | - | chr1_2:71243502-71243521 | None:intergenic | 35.0% |
| AAAATCCAAACAGTGTGGAT+GGG | + | chr1_2:71243510-71243529 | Msa0089640:intron | 35.0% | |
| !! | AAGGTGCCACTCAATATTAA+AGG | + | chr1_2:71243548-71243567 | Msa0089640:intron | 35.0% |
| TAAACTCTATATAGTGCTGC+AGG | - | chr1_2:71243596-71243615 | None:intergenic | 35.0% | |
| AAAGAGACGACAAGAAAGTA+AGG | + | chr1_2:71243628-71243647 | Msa0089640:intron | 35.0% | |
| GAATTATCGCAGATGAAGTT+TGG | + | chr1_2:71243726-71243745 | Msa0089640:intron | 35.0% | |
| TACCATCTTTGCTACGATAA+GGG | - | chr1_2:71243756-71243775 | None:intergenic | 35.0% | |
| TTACCATCTTTGCTACGATA+AGG | - | chr1_2:71243757-71243776 | None:intergenic | 35.0% | |
| ATAATCCAATAGTCAGTGGA+AGG | + | chr1_2:71243859-71243878 | Msa0089640:intron | 35.0% | |
| ! | CTTTTGTCATGTTATAGTGC+AGG | + | chr1_2:71244047-71244066 | Msa0089640:intron | 35.0% |
| TCTTACGTTCTATCTTCTAG+AGG | + | chr1_2:71244106-71244125 | Msa0089640:intron | 35.0% | |
| GAAATTACAAGTTTGAGCTG+TGG | - | chr1_2:71244138-71244157 | None:intergenic | 35.0% | |
| !!! | CCGATACCTTTTTCAGTTTT+TGG | - | chr1_2:71244325-71244344 | None:intergenic | 35.0% |
| TTCCATATTGATGTTCCAAC+AGG | + | chr1_2:71244537-71244556 | Msa0089640:intron | 35.0% | |
| GTGAAGTGTATGTTCAGTTA+TGG | + | chr1_2:71244559-71244578 | Msa0089640:intron | 35.0% | |
| AAGCTGCAAACAAAATGAAG+GGG | - | chr1_2:71244597-71244616 | None:intergenic | 35.0% | |
| CTTCCATCATCCTTTAGATA+AGG | - | chr1_2:71244772-71244791 | None:intergenic | 35.0% | |
| !! | TATCTAAAGGATGATGGAAG+TGG | + | chr1_2:71244772-71244791 | Msa0089640:CDS | 35.0% |
| ATCTTTGCTTGGAAGAATAG+AGG | + | chr1_2:71245025-71245044 | Msa0089640:intron | 35.0% | |
| TCTTTGCTTGGAAGAATAGA+GGG | + | chr1_2:71245026-71245045 | Msa0089640:intron | 35.0% | |
| AAATGTGTAAGTGTAGTGAG+AGG | + | chr1_2:71245066-71245085 | Msa0089640:intron | 35.0% | |
| AGAATGATGAAACCCTTGTA+AGG | + | chr1_2:71245130-71245149 | Msa0089640:intron | 35.0% | |
| TTCACTATATGGATACGTAC+AGG | + | chr1_2:71245263-71245282 | Msa0089640:intron | 35.0% | |
| CTATAAGAAGCAGACAAAGA+GGG | + | chr1_2:71245373-71245392 | Msa0089640:CDS | 35.0% | |
| TATAAGAAGCAGACAAAGAG+GGG | + | chr1_2:71245374-71245393 | Msa0089640:CDS | 35.0% | |
| ATTCTGATAAGCCTATCCAA+CGG | + | chr1_2:71245418-71245437 | Msa0089640:CDS | 35.0% | |
| ! | TATCCAACGGGATTCTAAAA+GGG | + | chr1_2:71245431-71245450 | Msa0089640:CDS | 35.0% |
| CTTTAGGTGCTTTCATTTCA+CGG | - | chr1_2:71245631-71245650 | None:intergenic | 35.0% | |
| TGAAGAAGCTGATAGACTAA+TGG | + | chr1_2:71245949-71245968 | Msa0089640:CDS | 35.0% | |
| AAAATAATCACGAGGCTAGA+AGG | - | chr1_2:71246053-71246072 | None:intergenic | 35.0% | |
| TTTCGGATGTGAAAACATTG+TGG | + | chr1_2:71246301-71246320 | Msa0089640:intron | 35.0% | |
| TGAAAACATTGTGGCTAAGA+TGG | + | chr1_2:71246310-71246329 | Msa0089640:intron | 35.0% | |
| ! | ACGTTTTGCATCAATAGTAC+CGG | + | chr1_2:71246433-71246452 | Msa0089640:intron | 35.0% |
| ATATCTTCTGAGCAGAAGAA+AGG | + | chr1_2:71246542-71246561 | Msa0089640:CDS | 35.0% | |
| AATGCAGAACAAGCAGTTTA+AGG | + | chr1_2:71246601-71246620 | Msa0089640:CDS | 35.0% | |
| !! | GATGAATATGACTTTGAGAC+TGG | + | chr1_2:71246641-71246660 | Msa0089640:CDS | 35.0% |
| TTGGATTCTCTAGACAAAAG+AGG | - | chr1_2:71246766-71246785 | None:intergenic | 35.0% | |
| TTCAACGAACAACAAGCTTA+TGG | - | chr1_2:71246952-71246971 | None:intergenic | 35.0% | |
| AGTAACCTTGGATCCAAATA+TGG | + | chr1_2:71247121-71247140 | Msa0089640:intron | 35.0% | |
| AGTGTTTCTTGAAACTGTGA+TGG | + | chr1_2:71247473-71247492 | Msa0089640:CDS | 35.0% | |
| GTGTTTCTTGAAACTGTGAT+GGG | + | chr1_2:71247474-71247493 | Msa0089640:CDS | 35.0% | |
| ! | GGCTCCTTTATACTTTAAGA+AGG | + | chr1_2:71247563-71247582 | Msa0089640:CDS | 35.0% |
| AAAACATCATCAGTGTTCCA+TGG | + | chr1_2:71247736-71247755 | Msa0089640:intron | 35.0% | |
| AAACATCATCAGTGTTCCAT+GGG | + | chr1_2:71247737-71247756 | Msa0089640:intron | 35.0% | |
| CCCATAGCGTTTCTATAATA+AGG | + | chr1_2:71247907-71247926 | Msa0089640:intron | 35.0% | |
| !! | TTGGGGAGTAACTTGTTAAA+TGG | + | chr1_2:71248003-71248022 | Msa0089640:intron | 35.0% |
| !! | CTTGTTAAATGGTTCTAGCA+TGG | + | chr1_2:71248014-71248033 | Msa0089640:intron | 35.0% |
| ! | GGTTTTCTCATTCAACTTCA+TGG | - | chr1_2:71248120-71248139 | None:intergenic | 35.0% |
| ! | GTGTGTTTGTCAACTTTTTG+GGG | + | chr1_2:71248174-71248193 | Msa0089640:intron | 35.0% |
| TCTAAGTACGATACATGACT+AGG | - | chr1_2:71248219-71248238 | None:intergenic | 35.0% | |
| ATCCAAATGTCCTCGTATAA+GGG | - | chr1_2:71248260-71248279 | None:intergenic | 35.0% | |
| GCCACAAATTTGATACCAAA+AGG | + | chr1_2:71248301-71248320 | Msa0089640:intron | 35.0% | |
| !! | CTGCTTCATTTTTGTTTCCA+TGG | + | chr1_2:71248394-71248413 | Msa0089640:intron | 35.0% |
| !! | TTTTGTTTCCATGGAGTACT+CGG | + | chr1_2:71248403-71248422 | Msa0089640:intron | 35.0% |
| !!! | ACATCTGCAGTTTTAAGATC+CGG | - | chr1_2:71248463-71248482 | None:intergenic | 35.0% |
| GCAGATGTCATGTTTAGATA+TGG | + | chr1_2:71248475-71248494 | Msa0089640:intron | 35.0% | |
| CATGTTTAGATATGGTCATG+TGG | + | chr1_2:71248483-71248502 | Msa0089640:intron | 35.0% | |
| !!! | AGTTTTTTTTTTTGGGGGGT+GGG | - | chr1_2:71248539-71248558 | None:intergenic | 35.0% |
| !!! | TAGTTTTTTTTTTTGGGGGG+TGG | - | chr1_2:71248540-71248559 | None:intergenic | 35.0% |
| CTAGATGTCAAATAAAGGAC+AGG | + | chr1_2:71248557-71248576 | Msa0089640:intron | 35.0% | |
| ! | CACAAGCTTTTAAACTGGTT+CGG | + | chr1_2:71248678-71248697 | Msa0089640:intron | 35.0% |
| AATGATCCCAAAGGAAAACA+AGG | - | chr1_2:71248967-71248986 | None:intergenic | 35.0% | |
| TGGAATATCAATGATCCCAA+AGG | - | chr1_2:71248976-71248995 | None:intergenic | 35.0% | |
| ! | ACTCGTATCAATGAGTCTTT+TGG | - | chr1_2:71249163-71249182 | None:intergenic | 35.0% |
| TGAAAATAAGGAAAGCCCTT+GGG | - | chr1_2:71249210-71249229 | None:intergenic | 35.0% | |
| ATGAAAATAAGGAAAGCCCT+TGG | - | chr1_2:71249211-71249230 | None:intergenic | 35.0% | |
| AAGGAGTTTAAGAGTAGTCT+TGG | + | chr1_2:71249279-71249298 | Msa0089640:CDS | 35.0% | |
| AGGAGTTTAAGAGTAGTCTT+GGG | + | chr1_2:71249280-71249299 | Msa0089640:CDS | 35.0% | |
| AAGACATGTATAGACGTCAA+AGG | + | chr1_2:71249340-71249359 | Msa0089640:CDS | 35.0% | |
| CAATATAACTCGTTTATGCC+CGG | + | chr1_2:71249578-71249597 | Msa0089640:three_prime_UTR | 35.0% | |
| AATATAACTCGTTTATGCCC+GGG | + | chr1_2:71249579-71249598 | Msa0089640:three_prime_UTR | 35.0% | |
| ! | ATTTGTTGGAGGCTGCAAAT+TGG | - | chr1_2:71241909-71241928 | None:intergenic | 40.0% |
| GCATAAACCTCAATCAGCAA+GGG | - | chr1_2:71242121-71242140 | None:intergenic | 40.0% | |
| TGCATAAACCTCAATCAGCA+AGG | - | chr1_2:71242122-71242141 | None:intergenic | 40.0% | |
| TAACTCTACAAACCTGGTCA+CGG | - | chr1_2:71242300-71242319 | None:intergenic | 40.0% | |
| ! | TGAGACTGATAGAAGTATGG+TGG | - | chr1_2:71242323-71242342 | None:intergenic | 40.0% |
| CAGTGAGACTGATAGAAGTA+TGG | - | chr1_2:71242326-71242345 | None:intergenic | 40.0% | |
| ACAAGATGAGGACTTGGATA+AGG | + | chr1_2:71242416-71242435 | Msa0089640:CDS | 40.0% | |
| GAAGACTCTTCTTCTTCAGA+TGG | + | chr1_2:71242714-71242733 | Msa0089640:CDS | 40.0% | |
| TGCTTAGGTCTGAAAGTAAG+AGG | + | chr1_2:71242862-71242881 | Msa0089640:CDS | 40.0% | |
| !! | TCCTTTGTTTCTGAAACAGC+TGG | - | chr1_2:71242888-71242907 | None:intergenic | 40.0% |
| AACAAAGGAGATATTGCCAG+AGG | + | chr1_2:71242899-71242918 | Msa0089640:CDS | 40.0% | |
| TAGACATTTGAACAGCTGAG+GGG | - | chr1_2:71242968-71242987 | None:intergenic | 40.0% | |
| CTAGACATTTGAACAGCTGA+GGG | - | chr1_2:71242969-71242988 | None:intergenic | 40.0% | |
| TTATGCCCGTCATAATCTGT+TGG | + | chr1_2:71243046-71243065 | Msa0089640:intron | 40.0% | |
| ACGACACCAACAGATTATGA+CGG | - | chr1_2:71243055-71243074 | None:intergenic | 40.0% | |
| GAAAGATAGTATGGAACGCA+AGG | + | chr1_2:71243175-71243194 | Msa0089640:intron | 40.0% | |
| GCTTGAATTGTCCAATACCA+TGG | + | chr1_2:71243210-71243229 | Msa0089640:intron | 40.0% | |
| GATCCAAAATCCAAACAGTG+TGG | + | chr1_2:71243505-71243524 | Msa0089640:intron | 40.0% | |
| ! | CATCCACACTGTTTGGATTT+TGG | - | chr1_2:71243511-71243530 | None:intergenic | 40.0% |
| CAAAATCCAAACAGTGTGGA+TGG | + | chr1_2:71243509-71243528 | Msa0089640:intron | 40.0% | |
| ! | TGGGTGTGATTTGTGATAGA+AGG | + | chr1_2:71243529-71243548 | Msa0089640:intron | 40.0% |
| AAGGTCTTTGTCGCAAATGT+TGG | + | chr1_2:71243647-71243666 | Msa0089640:intron | 40.0% | |
| CTTTGTCGCAAATGTTGGAA+TGG | + | chr1_2:71243652-71243671 | Msa0089640:intron | 40.0% | |
| ! | CTTTTCTCAATAGGTGGGAT+TGG | - | chr1_2:71243987-71244006 | None:intergenic | 40.0% |
| CAATCCCACCTATTGAGAAA+AGG | + | chr1_2:71243985-71244004 | Msa0089640:intron | 40.0% | |
| ! | AAAAGTTTTACAGCACCAGG+AGG | - | chr1_2:71244032-71244051 | None:intergenic | 40.0% |
| ! | GACAAAAGTTTTACAGCACC+AGG | - | chr1_2:71244035-71244054 | None:intergenic | 40.0% |
| CAACAACAGAAATAGAGCCT+TGG | - | chr1_2:71244193-71244212 | None:intergenic | 40.0% | |
| ! | CGGATTCAGATAGTTAGCTT+TGG | + | chr1_2:71244342-71244361 | Msa0089640:intron | 40.0% |
| CACCTGTTGGAACATCAATA+TGG | - | chr1_2:71244542-71244561 | None:intergenic | 40.0% | |
| TGAACATACACTTCACCTGT+TGG | - | chr1_2:71244555-71244574 | None:intergenic | 40.0% | |
| GTCAAAGAAGGCAAATCCTA+AGG | + | chr1_2:71244738-71244757 | Msa0089640:intron | 40.0% | |
| AAGTGGTTACCCAGAAGAAA+GGG | + | chr1_2:71244789-71244808 | Msa0089640:CDS | 40.0% | |
| TAACTCCATCCCTTTCTTCT+GGG | - | chr1_2:71244801-71244820 | None:intergenic | 40.0% | |
| TTAACTCCATCCCTTTCTTC+TGG | - | chr1_2:71244802-71244821 | None:intergenic | 40.0% | |
| AGCAAGGGAATAAAACCTCT+TGG | - | chr1_2:71244939-71244958 | None:intergenic | 40.0% | |
| TGAGAGGACCATTAGCATTT+GGG | + | chr1_2:71245082-71245101 | Msa0089640:intron | 40.0% | |
| GTTCAGTTCCCAAATGCTAA+TGG | - | chr1_2:71245093-71245112 | None:intergenic | 40.0% | |
| GGAGACAATTCTCCTTACAA+GGG | - | chr1_2:71245145-71245164 | None:intergenic | 40.0% | |
| AGGAGACAATTCTCCTTACA+AGG | - | chr1_2:71245146-71245165 | None:intergenic | 40.0% | |
| ATATGGATACGTACAGGTTG+TGG | + | chr1_2:71245269-71245288 | Msa0089640:intron | 40.0% | |
| TATGGATACGTACAGGTTGT+GGG | + | chr1_2:71245270-71245289 | Msa0089640:intron | 40.0% | |
| GCTATAAGAAGCAGACAAAG+AGG | + | chr1_2:71245372-71245391 | Msa0089640:CDS | 40.0% | |
| TGGATAGGCTTATCAGAATC+TGG | - | chr1_2:71245417-71245436 | None:intergenic | 40.0% | |
| TTCTGATAAGCCTATCCAAC+GGG | + | chr1_2:71245419-71245438 | Msa0089640:CDS | 40.0% | |
| !!! | CTTTTAGAATCCCGTTGGAT+AGG | - | chr1_2:71245432-71245451 | None:intergenic | 40.0% |
| CTATCCAACGGGATTCTAAA+AGG | + | chr1_2:71245430-71245449 | Msa0089640:CDS | 40.0% | |
| !!! | TTACCCTTTTAGAATCCCGT+TGG | - | chr1_2:71245437-71245456 | None:intergenic | 40.0% |
| CGAAATTCAGTGAAGTGCAA+TGG | - | chr1_2:71245561-71245580 | None:intergenic | 40.0% | |
| TTCGCTTATGAAATACTGGC+AGG | + | chr1_2:71245577-71245596 | Msa0089640:intron | 40.0% | |
| TATGCGTGAGTTAGTTAGCA+AGG | + | chr1_2:71245766-71245785 | Msa0089640:CDS | 40.0% | |
| ACTTTCCAAAACAGAGCCAT+CGG | - | chr1_2:71245804-71245823 | None:intergenic | 40.0% | |
| !!! | GGAAAGTTTTGAAGCGGAAA+AGG | + | chr1_2:71245817-71245836 | Msa0089640:CDS | 40.0% |
| !! | ACTACTGCTTTTCTTTCACC+AGG | - | chr1_2:71245863-71245882 | None:intergenic | 40.0% |
| TAACATGAGTGCAAACCAGT+TGG | + | chr1_2:71245889-71245908 | Msa0089640:CDS | 40.0% | |
| TCCTTTCAAACGAAGTTGCA+TGG | - | chr1_2:71245924-71245943 | None:intergenic | 40.0% | |
| CTAATGGTAAGCCCATAAGA+CGG | + | chr1_2:71245965-71245984 | Msa0089640:intron | 40.0% | |
| TAATGGTAAGCCCATAAGAC+GGG | + | chr1_2:71245966-71245985 | Msa0089640:intron | 40.0% | |
| !!! | AAGGGTTTTGAACACAAAGC+AGG | + | chr1_2:71246156-71246175 | Msa0089640:CDS | 40.0% |
| !!! | AGGGTTTTGAACACAAAGCA+GGG | + | chr1_2:71246157-71246176 | Msa0089640:CDS | 40.0% |
| !! | AGGGAAGTTCTAGTTCTAGA+AGG | + | chr1_2:71246212-71246231 | Msa0089640:CDS | 40.0% |
| ATTCAAGGTATGCTATGCAG+AGG | + | chr1_2:71246519-71246538 | Msa0089640:intron | 40.0% | |
| AAGAGTAGAAAGAAGCAAGG+AGG | + | chr1_2:71246674-71246693 | Msa0089640:CDS | 40.0% | |
| AAAGAGGCAACGTTCTTTCT+GGG | - | chr1_2:71246750-71246769 | None:intergenic | 40.0% | |
| AAAAGAGGCAACGTTCTTTC+TGG | - | chr1_2:71246751-71246770 | None:intergenic | 40.0% | |
| ATGGACACAACAAGATGCAT+AGG | - | chr1_2:71246794-71246813 | None:intergenic | 40.0% | |
| CATATCTTATGTTGCCACAG+TGG | + | chr1_2:71246825-71246844 | Msa0089640:CDS | 40.0% | |
| GGTAAAATACAGCAATGACC+AGG | - | chr1_2:71246863-71246882 | None:intergenic | 40.0% | |
| ! | TGGTGGTTGTTGTTGTTGTT+TGG | + | chr1_2:71247209-71247228 | Msa0089640:intron | 40.0% |
| GCATGAATCAGCTACAAGAA+CGG | + | chr1_2:71247371-71247390 | Msa0089640:intron | 40.0% | |
| ! | AACGGTGGATGATAATGTGT+GGG | + | chr1_2:71247389-71247408 | Msa0089640:CDS | 40.0% |
| ! | TCTTGAAACTGTGATGGGAT+TGG | + | chr1_2:71247479-71247498 | Msa0089640:CDS | 40.0% |
| TTAGCAACATCTTTGGGTAC+AGG | - | chr1_2:71247540-71247559 | None:intergenic | 40.0% | |
| ACCCAAAGATGTTGCTAAAG+AGG | + | chr1_2:71247542-71247561 | Msa0089640:CDS | 40.0% | |
| GCCTCTTTAGCAACATCTTT+GGG | - | chr1_2:71247546-71247565 | None:intergenic | 40.0% | |
| AGCCTCTTTAGCAACATCTT+TGG | - | chr1_2:71247547-71247566 | None:intergenic | 40.0% | |
| AACATCATCAGTGTTCCATG+GGG | + | chr1_2:71247738-71247757 | Msa0089640:intron | 40.0% | |
| !!! | TCAACTTTTTGGGGTGTCTT+GGG | + | chr1_2:71248183-71248202 | Msa0089640:intron | 40.0% |
| ACATTAGGTTCCCTTATACG+AGG | + | chr1_2:71248247-71248266 | Msa0089640:intron | 40.0% | |
| TTCCCTTATACGAGGACATT+TGG | + | chr1_2:71248255-71248274 | Msa0089640:intron | 40.0% | |
| CATCCAAATGTCCTCGTATA+AGG | - | chr1_2:71248261-71248280 | None:intergenic | 40.0% | |
| GACATTTGGATGACCTAACT+AGG | + | chr1_2:71248269-71248288 | Msa0089640:intron | 40.0% | |
| AGCAATCAGTGTAGACTGTA+TGG | - | chr1_2:71248376-71248395 | None:intergenic | 40.0% | |
| TGGTTTAGTGTGAGATTTGC+CGG | + | chr1_2:71248441-71248460 | Msa0089640:intron | 40.0% | |
| ! | GGATGGATGTCTCAGATTTT+AGG | - | chr1_2:71248518-71248537 | None:intergenic | 40.0% |
| ATAAAGGACAGGGATGATAG+TGG | + | chr1_2:71248568-71248587 | Msa0089640:intron | 40.0% | |
| !!! | TACCCACCTTGTTTTCCTTT+GGG | + | chr1_2:71248958-71248977 | Msa0089640:intron | 40.0% |
| ATCCCAAAGGAAAACAAGGT+GGG | - | chr1_2:71248963-71248982 | None:intergenic | 40.0% | |
| AAAAACGGACGGTGAGTTTA+TGG | - | chr1_2:71249081-71249100 | None:intergenic | 40.0% | |
| TTGATGAAGCAGAAGATGAG+TGG | + | chr1_2:71249124-71249143 | Msa0089640:CDS | 40.0% | |
| ACTCATTGATACGAGTCAGA+AGG | + | chr1_2:71249167-71249186 | Msa0089640:CDS | 40.0% | |
| CTCATTGATACGAGTCAGAA+GGG | + | chr1_2:71249168-71249187 | Msa0089640:CDS | 40.0% | |
| TTTACGCAACTCAATTCCCA+AGG | + | chr1_2:71249191-71249210 | Msa0089640:CDS | 40.0% | |
| TTACGCAACTCAATTCCCAA+GGG | + | chr1_2:71249192-71249211 | Msa0089640:CDS | 40.0% | |
| !! | CTTGGGTTGAATGTCATTAG+AGG | + | chr1_2:71249297-71249316 | Msa0089640:CDS | 40.0% |
| !!! | TTGCTAGCTTTTCCAAAGAC+TGG | + | chr1_2:71249394-71249413 | Msa0089640:CDS | 40.0% |
| !!! | TGCTAGCTTTTCCAAAGACT+GGG | + | chr1_2:71249395-71249414 | Msa0089640:CDS | 40.0% |
| GTCAAAATGATCCCAGTCTT+TGG | - | chr1_2:71249409-71249428 | None:intergenic | 40.0% | |
| !! | AAGACTGGGATCATTTTGAC+TGG | + | chr1_2:71249409-71249428 | Msa0089640:CDS | 40.0% |
| AACTAGCATCTCTTGGCAAT+TGG | - | chr1_2:71249540-71249559 | None:intergenic | 40.0% | |
| CTATGATTCTCATAAAGCCC+GGG | - | chr1_2:71249599-71249618 | None:intergenic | 40.0% | |
| CCTATGATTCTCATAAAGCC+CGG | - | chr1_2:71249600-71249619 | None:intergenic | 40.0% | |
| !! | AAGTTTTGTGGTGAATCCGG+GGG | - | chr1_2:71241673-71241692 | None:intergenic | 45.0% |
| !! | GAAGTTTTGTGGTGAATCCG+GGG | - | chr1_2:71241674-71241693 | None:intergenic | 45.0% |
| !! | GGAAGTTTTGTGGTGAATCC+GGG | - | chr1_2:71241675-71241694 | None:intergenic | 45.0% |
| !! | GGGAAGTTTTGTGGTGAATC+CGG | - | chr1_2:71241676-71241695 | None:intergenic | 45.0% |
| !! | GTGTAGAATGGTAGTGGAGT+GGG | - | chr1_2:71241787-71241806 | None:intergenic | 45.0% |
| ! | AGAAGGGTGTAGAATGGTAG+TGG | - | chr1_2:71241793-71241812 | None:intergenic | 45.0% |
| TCCCTGCTGCGAAATTGATT+AGG | + | chr1_2:71242042-71242061 | Msa0089640:intron | 45.0% | |
| CCCTAATCAATTTCGCAGCA+GGG | - | chr1_2:71242046-71242065 | None:intergenic | 45.0% | |
| CCCTGCTGCGAAATTGATTA+GGG | + | chr1_2:71242043-71242062 | Msa0089640:intron | 45.0% | |
| ACCCTAATCAATTTCGCAGC+AGG | - | chr1_2:71242047-71242066 | None:intergenic | 45.0% | |
| ! | TTCTCAACCCTTGCTGATTG+AGG | + | chr1_2:71242111-71242130 | Msa0089640:intron | 45.0% |
| AACTCTACAAACCTGGTCAC+GGG | - | chr1_2:71242299-71242318 | None:intergenic | 45.0% | |
| TGGTGGTAACTCTACAAACC+TGG | - | chr1_2:71242306-71242325 | None:intergenic | 45.0% | |
| CTAGGTACAAGATGAGGACT+TGG | + | chr1_2:71242410-71242429 | Msa0089640:intron | 45.0% | |
| AAGGGTCCAGAAAGAAGAAG+TGG | + | chr1_2:71242556-71242575 | Msa0089640:CDS | 45.0% | |
| CAACTGAAAGTGAAAGCGAC+CGG | + | chr1_2:71242610-71242629 | Msa0089640:CDS | 45.0% | |
| AACTGAAAGTGAAAGCGACC+GGG | + | chr1_2:71242611-71242630 | Msa0089640:CDS | 45.0% | |
| ACCGGGATGATAAGAAACGA+AGG | + | chr1_2:71242628-71242647 | Msa0089640:CDS | 45.0% | |
| GCCTTCGTTTCTTATCATCC+CGG | - | chr1_2:71242632-71242651 | None:intergenic | 45.0% | |
| GGGATGATAAGAAACGAAGG+CGG | + | chr1_2:71242631-71242650 | Msa0089640:CDS | 45.0% | |
| TGATAAGAAACGAAGGCGGA+AGG | + | chr1_2:71242635-71242654 | Msa0089640:CDS | 45.0% | |
| GATAAGAAACGAAGGCGGAA+GGG | + | chr1_2:71242636-71242655 | Msa0089640:CDS | 45.0% | |
| AGAAAAGAGATGGACGGTCA+AGG | + | chr1_2:71242664-71242683 | Msa0089640:CDS | 45.0% | |
| ACGGTCAAGGAGTGGTAAAA+AGG | + | chr1_2:71242677-71242696 | Msa0089640:CDS | 45.0% | |
| TCTTCTTCAGATGGCAGTGA+TGG | + | chr1_2:71242723-71242742 | Msa0089640:CDS | 45.0% | |
| AGATGGCAGTGATGGTTCTT+TGG | + | chr1_2:71242731-71242750 | Msa0089640:CDS | 45.0% | |
| GATGGCAGTGATGGTTCTTT+GGG | + | chr1_2:71242732-71242751 | Msa0089640:CDS | 45.0% | |
| !!! | GTGACTTTTGGTGTTTCCGT+TGG | - | chr1_2:71242761-71242780 | None:intergenic | 45.0% |
| TCACGTACAAAAGATGGGAG+CGG | + | chr1_2:71242777-71242796 | Msa0089640:CDS | 45.0% | |
| AGCGGAGAGAACAAGATCAA+AGG | + | chr1_2:71242795-71242814 | Msa0089640:CDS | 45.0% | |
| ! | TGGGATTGGATTGGATGCTT+AGG | + | chr1_2:71242847-71242866 | Msa0089640:CDS | 45.0% |
| ! | GCCAGCTGTTTCAGAAACAA+AGG | + | chr1_2:71242884-71242903 | Msa0089640:CDS | 45.0% |
| AAAGGAGATATTGCCAGAGG+AGG | + | chr1_2:71242902-71242921 | Msa0089640:CDS | 45.0% | |
| CTAAGACATACCTCCTCAAC+CGG | - | chr1_2:71242930-71242949 | None:intergenic | 45.0% | |
| TTTGAACAGCTGAGGGGAAA+TGG | - | chr1_2:71242962-71242981 | None:intergenic | 45.0% | |
| GCTAGACATTTGAACAGCTG+AGG | - | chr1_2:71242970-71242989 | None:intergenic | 45.0% | |
| CGACACCAACAGATTATGAC+GGG | - | chr1_2:71243054-71243073 | None:intergenic | 45.0% | |
| ATGCTAACAAGTGCCCTTTG+TGG | + | chr1_2:71243275-71243294 | Msa0089640:intron | 45.0% | |
| ! | GGCACTTGCTAAGAAGTCAA+AGG | - | chr1_2:71243398-71243417 | None:intergenic | 45.0% |
| ACTTCTTAGCAAGTGCCCTT+AGG | + | chr1_2:71243401-71243420 | Msa0089640:intron | 45.0% | |
| CTTCTTAGCAAGTGCCCTTA+GGG | + | chr1_2:71243402-71243421 | Msa0089640:intron | 45.0% | |
| AATGCTAACAGGTGCCCTAA+GGG | - | chr1_2:71243419-71243438 | None:intergenic | 45.0% | |
| AAATGCTAACAGGTGCCCTA+AGG | - | chr1_2:71243420-71243439 | None:intergenic | 45.0% | |
| AGCCCTTATCGTAGCAAAGA+TGG | + | chr1_2:71243751-71243770 | Msa0089640:intron | 45.0% | |
| TGGAGGAGCTCTATTTAGGA+GGG | + | chr1_2:71243820-71243839 | Msa0089640:intron | 45.0% | |
| ! | GACGCCTTTTCTCAATAGGT+GGG | - | chr1_2:71243992-71244011 | None:intergenic | 45.0% |
| ! | CACCTATTGAGAAAAGGCGT+CGG | + | chr1_2:71243991-71244010 | Msa0089640:intron | 45.0% |
| ! | AACCGACGCCTTTTCTCAAT+AGG | - | chr1_2:71243996-71244015 | None:intergenic | 45.0% |
| ! | TTGTTGTTGCATTGTCCTCC+TGG | + | chr1_2:71244014-71244033 | Msa0089640:intron | 45.0% |
| GAAGTTGTTGTCGAGTGACT+AGG | - | chr1_2:71244160-71244179 | None:intergenic | 45.0% | |
| CTCATGCAGAAGAAAGCCAA+AGG | - | chr1_2:71244399-71244418 | None:intergenic | 45.0% | |
| GAAGTGGTTACCCAGAAGAA+AGG | + | chr1_2:71244788-71244807 | Msa0089640:CDS | 45.0% | |
| GAAAGGGATGGAGTTAACGT+TGG | + | chr1_2:71244805-71244824 | Msa0089640:CDS | 45.0% | |
| TTCTATCGTCCTCCCTTGTT+GGG | + | chr1_2:71244839-71244858 | Msa0089640:CDS | 45.0% | |
| AGGACAGAAGGATCTTTGCT+TGG | + | chr1_2:71245014-71245033 | Msa0089640:intron | 45.0% | |
| GTGAGAGGACCATTAGCATT+TGG | + | chr1_2:71245081-71245100 | Msa0089640:intron | 45.0% | |
| AAGGAGAGTAGTAACTCCGA+TGG | + | chr1_2:71245785-71245804 | Msa0089640:CDS | 45.0% | |
| !! | TAACTCCGATGGCTCTGTTT+TGG | + | chr1_2:71245796-71245815 | Msa0089640:CDS | 45.0% |
| TCTCCAGATGTAGACATACC+TGG | + | chr1_2:71245842-71245861 | Msa0089640:CDS | 45.0% | |
| TCACCAGGTATGTCTACATC+TGG | - | chr1_2:71245848-71245867 | None:intergenic | 45.0% | |
| GCCATGCAACTTCGTTTGAA+AGG | + | chr1_2:71245920-71245939 | Msa0089640:CDS | 45.0% | |
| TGCATACTCTCCCGTCTTAT+GGG | - | chr1_2:71245979-71245998 | None:intergenic | 45.0% | |
| ATGCATACTCTCCCGTCTTA+TGG | - | chr1_2:71245980-71245999 | None:intergenic | 45.0% | |
| CCTGCCCACCAAAACAATAA+TGG | - | chr1_2:71246129-71246148 | None:intergenic | 45.0% | |
| !!! | CCATTATTGTTTTGGTGGGC+AGG | + | chr1_2:71246126-71246145 | Msa0089640:intron | 45.0% |
| TTCTGAGCAGAAGAAAGGAG+AGG | + | chr1_2:71246547-71246566 | Msa0089640:CDS | 45.0% | |
| ACAAGATGCATAGGCCGATT+TGG | - | chr1_2:71246785-71246804 | None:intergenic | 45.0% | |
| TGAATCAGCTACAAGAACGG+TGG | + | chr1_2:71247374-71247393 | Msa0089640:CDS | 45.0% | |
| ! | GAACGGTGGATGATAATGTG+TGG | + | chr1_2:71247388-71247407 | Msa0089640:CDS | 45.0% |
| ! | ACGGTGGATGATAATGTGTG+GGG | + | chr1_2:71247390-71247409 | Msa0089640:CDS | 45.0% |
| ATGGGGAGTAAGGGATTTGA+GGG | + | chr1_2:71247755-71247774 | Msa0089640:intron | 45.0% | |
| GTAAGGGATTTGAGGGATGT+TGG | + | chr1_2:71247762-71247781 | Msa0089640:intron | 45.0% | |
| ATTTGAGGGATGTTGGATCG+TGG | + | chr1_2:71247769-71247788 | Msa0089640:intron | 45.0% | |
| !!! | GTCAACTTTTTGGGGTGTCT+TGG | + | chr1_2:71248182-71248201 | Msa0089640:intron | 45.0% |
| ATGACCTAACTAGGAGACGA+TGG | + | chr1_2:71248278-71248297 | Msa0089640:intron | 45.0% | |
| TGACCTAACTAGGAGACGAT+GGG | + | chr1_2:71248279-71248298 | Msa0089640:intron | 45.0% | |
| ! | AGCAGGTATGCTTCACCTTT+TGG | - | chr1_2:71248319-71248338 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGGGGGTGGGA+TGG | - | chr1_2:71248535-71248554 | None:intergenic | 45.0% |
| TCATGATTCACGACTTCACG+TGG | + | chr1_2:71248608-71248627 | Msa0089640:intron | 45.0% | |
| GAACCTGCAGAATCTGAACA+GGG | + | chr1_2:71248904-71248923 | Msa0089640:intron | 45.0% | |
| AGGAAAACAAGGTGGGTAGA+TGG | - | chr1_2:71248956-71248975 | None:intergenic | 45.0% | |
| !!! | CTACCCACCTTGTTTTCCTT+TGG | + | chr1_2:71248957-71248976 | Msa0089640:intron | 45.0% |
| GATCCCAAAGGAAAACAAGG+TGG | - | chr1_2:71248964-71248983 | None:intergenic | 45.0% | |
| ! | TGAGTCTTTTGGCATTGTGC+TGG | - | chr1_2:71249152-71249171 | None:intergenic | 45.0% |
| ! | CATTAGAGGCATGCTGCATT+TGG | + | chr1_2:71249311-71249330 | Msa0089640:CDS | 45.0% |
| ! | ACGTCAAAGGTACGAGAAAG+TGG | + | chr1_2:71249353-71249372 | Msa0089640:CDS | 45.0% |
| ! | TCAAAGGTACGAGAAAGTGG+AGG | + | chr1_2:71249356-71249375 | Msa0089640:CDS | 45.0% |
| GTGGAGAAACTAGCATCTCT+TGG | - | chr1_2:71249547-71249566 | None:intergenic | 45.0% | |
| ! | CCGGGCTTTATGAGAATCAT+AGG | + | chr1_2:71249597-71249616 | Msa0089640:three_prime_UTR | 45.0% |
| !! | AAACAAAATAAATAAATAAA+TGG | - | chr1_2:71247934-71247953 | None:intergenic | 5.0% |
| TGTAGTTCACTATTCCCCCC+CGG | + | chr1_2:71241654-71241673 | Msa0089640:five_prime_UTR | 50.0% | |
| !! | AGTTTTGTGGTGAATCCGGG+GGG | - | chr1_2:71241672-71241691 | None:intergenic | 50.0% |
| ! | AGGGGAAGAGGGAAGTTTTG+TGG | - | chr1_2:71241685-71241704 | None:intergenic | 50.0% |
| AGAGAAGGAAGGAGAGGTTG+TGG | - | chr1_2:71241754-71241773 | None:intergenic | 50.0% | |
| GAAAGGAGAGAAGGAAGGAG+AGG | - | chr1_2:71241760-71241779 | None:intergenic | 50.0% | |
| !! | GGTGTAGAATGGTAGTGGAG+TGG | - | chr1_2:71241788-71241807 | None:intergenic | 50.0% |
| !! | GAGACCTTGCGTTTTCGAGA+CGG | - | chr1_2:71241829-71241848 | None:intergenic | 50.0% |
| ACGATTAGGACCCCAATTGC+AGG | - | chr1_2:71242019-71242038 | None:intergenic | 50.0% | |
| CGCAGCAGGGATATACGATT+AGG | - | chr1_2:71242033-71242052 | None:intergenic | 50.0% | |
| GAAATTCATTCCCCGTGACC+AGG | + | chr1_2:71242285-71242304 | Msa0089640:CDS | 50.0% | |
| ACTCTACAAACCTGGTCACG+GGG | - | chr1_2:71242298-71242317 | None:intergenic | 50.0% | |
| ATGGTTCTTTGGGTCGCCAA+CGG | + | chr1_2:71242742-71242761 | Msa0089640:CDS | 50.0% | |
| GATATTGCCAGAGGAGGTTC+CGG | + | chr1_2:71242908-71242927 | Msa0089640:CDS | 50.0% | |
| TCACACCCATCCACACTGTT+TGG | - | chr1_2:71243518-71243537 | None:intergenic | 50.0% | |
| AACATGTGTGCCGAAAGACG+TGG | + | chr1_2:71243800-71243819 | Msa0089640:intron | 50.0% | |
| TAGAGCTCCTCCACGTCTTT+CGG | - | chr1_2:71243813-71243832 | None:intergenic | 50.0% | |
| GACGTGGAGGAGCTCTATTT+AGG | + | chr1_2:71243816-71243835 | Msa0089640:intron | 50.0% | |
| GTGGAGGAGCTCTATTTAGG+AGG | + | chr1_2:71243819-71243838 | Msa0089640:intron | 50.0% | |
| ! | CGACGCCTTTTCTCAATAGG+TGG | - | chr1_2:71243993-71244012 | None:intergenic | 50.0% |
| GGTTACCCAGAAGAAAGGGA+TGG | + | chr1_2:71244793-71244812 | Msa0089640:CDS | 50.0% | |
| CTTCTATCGTCCTCCCTTGT+TGG | + | chr1_2:71244838-71244857 | Msa0089640:CDS | 50.0% | |
| TCTATCGTCCTCCCTTGTTG+GGG | + | chr1_2:71244840-71244859 | Msa0089640:CDS | 50.0% | |
| ACGTACAGGTTGTGGGAGAA+AGG | + | chr1_2:71245277-71245296 | Msa0089640:intron | 50.0% | |
| TACAGGTTGTGGGAGAAAGG+TGG | + | chr1_2:71245280-71245299 | Msa0089640:intron | 50.0% | |
| ACAGGTTGTGGGAGAAAGGT+GGG | + | chr1_2:71245281-71245300 | Msa0089640:intron | 50.0% | |
| TTCATTTCACGGTCCCGAGA+AGG | - | chr1_2:71245620-71245639 | None:intergenic | 50.0% | |
| !! | AAGCCAGTTTGCTGTAGCTG+AGG | + | chr1_2:71245682-71245701 | Msa0089640:CDS | 50.0% |
| !! | AGCCAGTTTGCTGTAGCTGA+GGG | + | chr1_2:71245683-71245702 | Msa0089640:CDS | 50.0% |
| TGCAAACCAGTTGGCAGCTA+AGG | + | chr1_2:71245898-71245917 | Msa0089640:CDS | 50.0% | |
| !!! | TTGTTTTGGTGGGCAGGAAG+AGG | + | chr1_2:71246132-71246151 | Msa0089640:intron | 50.0% |
| TGCGTGTTCGGAAGTAACCT+TGG | + | chr1_2:71247109-71247128 | Msa0089640:intron | 50.0% | |
| TCAGTGTTCCATGGGGAGTA+AGG | + | chr1_2:71247745-71247764 | Msa0089640:intron | 50.0% | |
| CAGTGTTCCATGGGGAGTAA+GGG | + | chr1_2:71247746-71247765 | Msa0089640:intron | 50.0% | |
| CTCAAATCCCTTACTCCCCA+TGG | - | chr1_2:71247756-71247775 | None:intergenic | 50.0% | |
| CATGGGGAGTAAGGGATTTG+AGG | + | chr1_2:71247754-71247773 | Msa0089640:intron | 50.0% | |
| CATTGAGTCCGAGTACTCCA+TGG | - | chr1_2:71248414-71248433 | None:intergenic | 50.0% | |
| GTACTCGGACTCAATGCATG+AGG | + | chr1_2:71248418-71248437 | Msa0089640:intron | 50.0% | |
| !! | GGATGATAGTGGCACGTGTT+GGG | + | chr1_2:71248579-71248598 | Msa0089640:intron | 50.0% |
| TCTGATGATTGCGCCACATG+TGG | + | chr1_2:71248863-71248882 | Msa0089640:intron | 50.0% | |
| CGAACCTGCAGAATCTGAAC+AGG | + | chr1_2:71248903-71248922 | Msa0089640:intron | 50.0% | |
| CAACCCTGTTCAGATTCTGC+AGG | - | chr1_2:71248910-71248929 | None:intergenic | 50.0% | |
| ! | GTTTTGTGGTGAATCCGGGG+GGG | - | chr1_2:71241671-71241690 | None:intergenic | 55.0% |
| CTACTGCCGGAGAATAGGGA+CGG | - | chr1_2:71241726-71241745 | None:intergenic | 55.0% | |
| GAAGGAAGGAGAGGTTGTGG+AGG | - | chr1_2:71241751-71241770 | None:intergenic | 55.0% | |
| GCTGCGAAAGGAGAGAAGGA+AGG | - | chr1_2:71241765-71241784 | None:intergenic | 55.0% | |
| CTCTCCGTCTCGAAAACGCA+AGG | + | chr1_2:71241822-71241841 | Msa0089640:five_prime_UTR | 55.0% | |
| TGGCAGTTCACGCAACAGAG+TGG | - | chr1_2:71241854-71241873 | None:intergenic | 55.0% | |
| GGTCCTTCGTGGTCGTATGA+GGG | - | chr1_2:71241888-71241907 | None:intergenic | 55.0% | |
| TGGTCCTTCGTGGTCGTATG+AGG | - | chr1_2:71241889-71241908 | None:intergenic | 55.0% | |
| GGCTGCAAATTGGTCCTTCG+TGG | - | chr1_2:71241899-71241918 | None:intergenic | 55.0% | |
| AGAGATGGACGGTCAAGGAG+TGG | + | chr1_2:71242669-71242688 | Msa0089640:CDS | 55.0% | |
| ATGTGTGCCGAAAGACGTGG+AGG | + | chr1_2:71243803-71243822 | Msa0089640:intron | 55.0% | |
| ! | CCTCGCCTTCCACTGACTAT+TGG | - | chr1_2:71243867-71243886 | None:intergenic | 55.0% |
| CCAATAGTCAGTGGAAGGCG+AGG | + | chr1_2:71243864-71243883 | Msa0089640:intron | 55.0% | |
| ! | GTCAGTGGAAGGCGAGGTTT+TGG | + | chr1_2:71243870-71243889 | Msa0089640:intron | 55.0% |
| TGCTCCTCCATCCCCAACAA+GGG | - | chr1_2:71244854-71244873 | None:intergenic | 55.0% | |
| TTGCTCCTCCATCCCCAACA+AGG | - | chr1_2:71244855-71244874 | None:intergenic | 55.0% | |
| TTGGGGATGGAGGAGCAAGT+TGG | + | chr1_2:71244857-71244876 | Msa0089640:CDS | 55.0% | |
| CAAGAGCAAGCAGCTCGAGA+AGG | + | chr1_2:71244904-71244923 | Msa0089640:CDS | 55.0% | |
| AGAAGGACGAAGCTGCCAAG+AGG | + | chr1_2:71244921-71244940 | Msa0089640:CDS | 55.0% | |
| CAGGTTGTGGGAGAAAGGTG+GGG | + | chr1_2:71245282-71245301 | Msa0089640:intron | 55.0% | |
| GGAGAAAGGTGGGGTTCTCT+TGG | + | chr1_2:71245291-71245310 | Msa0089640:CDS | 55.0% | |
| CTAAAGCAGCTGCACCAGCT+CGG | + | chr1_2:71245337-71245356 | Msa0089640:CDS | 55.0% | |
| TAAAGCAGCTGCACCAGCTC+GGG | + | chr1_2:71245338-71245357 | Msa0089640:CDS | 55.0% | |
| CACCCTCAGCTACAGCAAAC+TGG | - | chr1_2:71245688-71245707 | None:intergenic | 55.0% | |
| ACAGCAATGACCAGGCACCA+CGG | - | chr1_2:71246855-71246874 | None:intergenic | 55.0% | |
| AAGCCTTACCCCACCAAGTG+GGG | - | chr1_2:71247190-71247209 | None:intergenic | 55.0% | |
| CAAGCCTTACCCCACCAAGT+GGG | - | chr1_2:71247191-71247210 | None:intergenic | 55.0% | |
| ! | TGATGGGATTGGCGCAGCAA+CGG | + | chr1_2:71247490-71247509 | Msa0089640:CDS | 55.0% |
| TGAGGGATGTTGGATCGTGG+TGG | + | chr1_2:71247772-71247791 | Msa0089640:intron | 55.0% | |
| ! | GGATGTTGGATCGTGGTGGA+GGG | + | chr1_2:71247776-71247795 | Msa0089640:intron | 55.0% |
| ! | TTGGATCGTGGTGGAGGGTT+TGG | + | chr1_2:71247781-71247800 | Msa0089640:intron | 55.0% |
| ! | TGGATCGTGGTGGAGGGTTT+GGG | + | chr1_2:71247782-71247801 | Msa0089640:intron | 55.0% |
| TGGTGGAGGGTTTGGGGAAA+TGG | + | chr1_2:71247789-71247808 | Msa0089640:intron | 55.0% | |
| TGGCCCATCGTCTCCTAGTT+AGG | - | chr1_2:71248285-71248304 | None:intergenic | 55.0% | |
| CTCGGACTCAATGCATGAGG+TGG | + | chr1_2:71248421-71248440 | Msa0089640:intron | 55.0% | |
| !! | GGGATGATAGTGGCACGTGT+TGG | + | chr1_2:71248578-71248597 | Msa0089640:intron | 55.0% |
| AGGCATGCTGCATTTGGCTG+AGG | + | chr1_2:71249317-71249336 | Msa0089640:CDS | 55.0% | |
| TTCCCTCTTCCCCTCCTACC+AGG | + | chr1_2:71241691-71241710 | Msa0089640:five_prime_UTR | 60.0% | |
| AGCCTGGTAGGAGGGGAAGA+GGG | - | chr1_2:71241696-71241715 | None:intergenic | 60.0% | |
| TAGCCTGGTAGGAGGGGAAG+AGG | - | chr1_2:71241697-71241716 | None:intergenic | 60.0% | |
| TGGTGGTAGCCTGGTAGGAG+GGG | - | chr1_2:71241703-71241722 | None:intergenic | 60.0% | |
| GTGGTGGTAGCCTGGTAGGA+GGG | - | chr1_2:71241704-71241723 | None:intergenic | 60.0% | |
| CCACCACCGTCCCTATTCTC+CGG | + | chr1_2:71241717-71241736 | Msa0089640:five_prime_UTR | 60.0% | |
| GGCGCTACTGCCGGAGAATA+GGG | - | chr1_2:71241730-71241749 | None:intergenic | 60.0% | |
| AGGCGCTACTGCCGGAGAAT+AGG | - | chr1_2:71241731-71241750 | None:intergenic | 60.0% | |
| ! | GTGGGCTGCGAAAGGAGAGA+AGG | - | chr1_2:71241769-71241788 | None:intergenic | 60.0% |
| !! | GTAGTGGAGTGGGCTGCGAA+AGG | - | chr1_2:71241777-71241796 | None:intergenic | 60.0% |
| CCTTCGTGGTCGTATGAGGG+CGG | - | chr1_2:71241885-71241904 | None:intergenic | 60.0% | |
| TCCTCAACCGGAACCTCCTC+TGG | - | chr1_2:71242918-71242937 | None:intergenic | 60.0% | |
| AGAGGAGGTTCCGGTTGAGG+AGG | + | chr1_2:71242917-71242936 | Msa0089640:CDS | 60.0% | |
| TCGTCCTCCCTTGTTGGGGA+TGG | + | chr1_2:71244844-71244863 | Msa0089640:CDS | 60.0% | |
| TCCTCCCTTGTTGGGGATGG+AGG | + | chr1_2:71244847-71244866 | Msa0089640:CDS | 60.0% | |
| TCCTCCATCCCCAACAAGGG+AGG | - | chr1_2:71244851-71244870 | None:intergenic | 60.0% | |
| GCATGTAGATGAGCCCGAGC+TGG | - | chr1_2:71245354-71245373 | None:intergenic | 60.0% | |
| ! | GCATGGCCTTAGCTGCCAAC+TGG | - | chr1_2:71245907-71245926 | None:intergenic | 60.0% |
| ! | TTGGTGGGCAGGAAGAGGCA+AGG | + | chr1_2:71246137-71246156 | Msa0089640:intron | 60.0% |
| ! | TGGTGGGCAGGAAGAGGCAA+GGG | + | chr1_2:71246138-71246157 | Msa0089640:intron | 60.0% |
| CAGCAATGACCAGGCACCAC+GGG | - | chr1_2:71246854-71246873 | None:intergenic | 60.0% | |
| TCCATGTAGCCGACCCCACT+TGG | + | chr1_2:71247174-71247193 | Msa0089640:intron | 60.0% | |
| ACCAAGTGGGGTCGGCTACA+TGG | - | chr1_2:71247178-71247197 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | + | chr1_2:71247177-71247196 | Msa0089640:intron | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | + | chr1_2:71247178-71247197 | Msa0089640:intron | 60.0% | |
| CTTACCCCACCAAGTGGGGT+CGG | - | chr1_2:71247186-71247205 | None:intergenic | 60.0% | |
| CCAAGCCTTACCCCACCAAG+TGG | - | chr1_2:71247192-71247211 | None:intergenic | 60.0% | |
| ! | CCACTTGGTGGGGTAAGGCT+TGG | + | chr1_2:71247189-71247208 | Msa0089640:intron | 60.0% |
| CTTGGTGGGGTAAGGCTTGG+TGG | + | chr1_2:71247192-71247211 | Msa0089640:intron | 60.0% | |
| !! | GCAGCAACGGAGGCATTGCA+TGG | + | chr1_2:71247503-71247522 | Msa0089640:CDS | 60.0% |
| GGGATGTTGGATCGTGGTGG+AGG | + | chr1_2:71247775-71247794 | Msa0089640:intron | 60.0% | |
| ! | GGATCGTGGTGGAGGGTTTG+GGG | + | chr1_2:71247783-71247802 | Msa0089640:intron | 60.0% |
| ! | GGTGGTGGTAGCCTGGTAGG+AGG | - | chr1_2:71241705-71241724 | None:intergenic | 65.0% |
| ! | GACGGTGGTGGTAGCCTGGT+AGG | - | chr1_2:71241708-71241727 | None:intergenic | 65.0% |
| ! | TAGGGACGGTGGTGGTAGCC+TGG | - | chr1_2:71241712-71241731 | None:intergenic | 65.0% |
| CCGGAGAATAGGGACGGTGG+TGG | - | chr1_2:71241720-71241739 | None:intergenic | 65.0% | |
| CTGCCGGAGAATAGGGACGG+TGG | - | chr1_2:71241723-71241742 | None:intergenic | 65.0% | |
| !! | GGTTGTGGAGGCGCTACTGC+CGG | - | chr1_2:71241739-71241758 | None:intergenic | 65.0% |
| ! | GTATGAGGGCGGAGGCGCAA+TGG | - | chr1_2:71241874-71241893 | None:intergenic | 65.0% |
| TCGTGGTCGTATGAGGGCGG+AGG | - | chr1_2:71241882-71241901 | None:intergenic | 65.0% | |
| CCGCCCTCATACGACCACGA+AGG | + | chr1_2:71241882-71241901 | Msa0089640:five_prime_UTR | 65.0% | |
| GCCAGAGGAGGTTCCGGTTG+AGG | + | chr1_2:71242914-71242933 | Msa0089640:CDS | 65.0% | |
| ! | GTAGCCGACCCCACTTGGTG+GGG | + | chr1_2:71247179-71247198 | Msa0089640:intron | 65.0% |
| ! | CGACCCCACTTGGTGGGGTA+AGG | + | chr1_2:71247184-71247203 | Msa0089640:intron | 65.0% |
| ! | TGGGATTGGCGCAGCAACGG+AGG | + | chr1_2:71247493-71247512 | Msa0089640:CDS | 65.0% |
| GTTGCCACAGTGGCAGCCCG+TGG | + | chr1_2:71246835-71246854 | Msa0089640:CDS | 70.0% | |
| ! | GGCACCACGGGCTGCCACTG+TGG | - | chr1_2:71246842-71246861 | None:intergenic | 75.0% |
| CAGTGGCAGCCCGTGGTGCC+TGG | + | chr1_2:71246842-71246861 | Msa0089640:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 71241632 | 71249739 | 71241632 | ID=Msa0089640;Name=Msa0089640 |
| chr1_2 | mRNA | 71241632 | 71249739 | 71241632 | ID=Msa0089640-mRNA-1;Parent=Msa0089640;Name=Msa0089640-mRNA-1;_AED=0.02;_eAED=0.02;_QI=341|1|1|1|0.88|0.8|10|281|768 |
| chr1_2 | exon | 71241632 | 71241944 | 71241632 | ID=Msa0089640-mRNA-1:exon:24531;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71242243 | 71242306 | 71242243 | ID=Msa0089640-mRNA-1:exon:24532;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71242414 | 71242938 | 71242414 | ID=Msa0089640-mRNA-1:exon:24533;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71244739 | 71244942 | 71244739 | ID=Msa0089640-mRNA-1:exon:24534;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71245285 | 71245452 | 71245285 | ID=Msa0089640-mRNA-1:exon:24535;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71245599 | 71245970 | 71245599 | ID=Msa0089640-mRNA-1:exon:24536;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71246148 | 71246233 | 71246148 | ID=Msa0089640-mRNA-1:exon:24537;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71246526 | 71246889 | 71246526 | ID=Msa0089640-mRNA-1:exon:24538;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71247372 | 71247584 | 71247372 | ID=Msa0089640-mRNA-1:exon:24539;Parent=Msa0089640-mRNA-1 |
| chr1_2 | exon | 71249120 | 71249739 | 71249120 | ID=Msa0089640-mRNA-1:exon:24540;Parent=Msa0089640-mRNA-1 |
| chr1_2 | five_prime_UTR | 71241632 | 71241944 | 71241632 | ID=Msa0089640-mRNA-1:five_prime_utr;Parent=Msa0089640-mRNA-1 |
| chr1_2 | five_prime_UTR | 71242243 | 71242270 | 71242243 | ID=Msa0089640-mRNA-1:five_prime_utr;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71242271 | 71242306 | 71242271 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71242414 | 71242938 | 71242414 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71244739 | 71244942 | 71244739 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71245285 | 71245452 | 71245285 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71245599 | 71245970 | 71245599 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71246148 | 71246233 | 71246148 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71246526 | 71246889 | 71246526 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71247372 | 71247584 | 71247372 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | CDS | 71249120 | 71249458 | 71249120 | ID=Msa0089640-mRNA-1:cds;Parent=Msa0089640-mRNA-1 |
| chr1_2 | three_prime_UTR | 71249459 | 71249739 | 71249459 | ID=Msa0089640-mRNA-1:three_prime_utr;Parent=Msa0089640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
