AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0612960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612960 MtrunA17_Chr4g0047751 92.823 418 3 2 1 418 1 391 0.0 786
Msa0612960 MtrunA17_Chr4g0047751 89.655 203 6 1 515 717 392 579 8.81e-109 342
Msa0612960 MtrunA17_Chr2g0282041 77.381 420 53 4 1 418 1 380 0.0 636
Msa0612960 MtrunA17_Chr2g0282041 77.835 194 25 4 515 705 381 559 8.46e-62 217
Msa0612960 MtrunA17_Chr2g0313531 56.044 182 61 3 1 180 1 165 2.33e-44 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612960 AT4G21660.1 73.031 419 78 6 5 418 8 396 0.0 568
Msa0612960 AT4G21660.1 75.904 166 38 1 515 680 397 560 1.42e-59 211
Msa0612960 AT4G21660.2 70.670 433 78 7 5 418 8 410 0.0 558
Msa0612960 AT4G21660.2 75.904 166 38 1 515 680 411 574 1.76e-59 211
Msa0612960 AT4G21660.3 81.643 207 15 1 212 418 307 490 2.79e-113 357
Msa0612960 AT4G21660.3 63.761 218 69 4 2 214 3 215 1.06e-61 219
Msa0612960 AT4G21660.3 75.904 166 38 1 515 680 491 654 8.29e-59 211
Msa0612960 AT1G11520.1 72.807 114 28 2 554 666 85 196 2.39e-45 160

Find 204 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCGGGCGTCCACTTTA+TGG 0.179680 4_2:+61498364 Msa0612960:CDS
TTCCAGGTTGATTTGCTTAA+AGG 0.222619 4_2:+61501018 Msa0612960:intron
CTGACACGTTCTTCTGTATA+AGG 0.229368 4_2:-61501848 None:intergenic
GAAGATGGATATTGATTATC+AGG 0.250368 4_2:+61497145 Msa0612960:CDS
GCGGCCATCGTTGCGGGATT+TGG 0.258522 4_2:-61494052 None:intergenic
TTGGTTATCATCCTGGTGGC+TGG 0.271971 4_2:+61498168 Msa0612960:CDS
GGCGCGTGTAAGAAAGTTAT+TGG 0.282146 4_2:-61493956 None:intergenic
GTCTGCATCTTGAGCAGTTC+GGG 0.294396 4_2:+61498350 Msa0612960:CDS
ACTTGATAAAGAGGCCTTTC+AGG 0.294843 4_2:-61500613 None:intergenic
GTTTCTGCGGCCATCGTTGC+GGG 0.296608 4_2:-61494058 None:intergenic
AAGACAAGTCAGGGGCAAAA+AGG 0.303775 4_2:+61500907 Msa0612960:CDS
CAAGACATATGCATCCCTTT+TGG 0.313100 4_2:-61501977 None:intergenic
TGTAAACCAACCTCATAATT+AGG 0.313993 4_2:-61498418 None:intergenic
AAATGCAATTACAAAGAAAA+AGG 0.325108 4_2:+61495436 Msa0612960:CDS
AGTCTCAAACAAGAAGAAAA+AGG 0.338769 4_2:+61495511 Msa0612960:CDS
CAGTGTTTCTACAGGTGTTA+TGG 0.344990 4_2:-61499341 None:intergenic
AAGTTCCACTTTGCAATTAG+AGG 0.345577 4_2:+61498444 Msa0612960:CDS
ATGATTTACATCTTATGTTC+TGG 0.352585 4_2:+61501924 Msa0612960:three_prime_UTR
CTTGCTCCTGGAACTTTGCT+TGG 0.355394 4_2:+61500743 Msa0612960:CDS
GAAAATCACCAAAGCCTCTA+AGG 0.355803 4_2:+61494189 Msa0612960:CDS
GTCGTTTCCAACGGAGATCT+TGG 0.362403 4_2:+61494100 Msa0612960:CDS
GTTTGGTTCCTTAGAGGCTT+TGG 0.376860 4_2:-61494197 None:intergenic
TTACACAAGAGGCTGTTTCC+AGG 0.378319 4_2:-61501421 None:intergenic
TGACTTGGAAGAGGAGGAAG+AGG 0.383213 4_2:+61500064 Msa0612960:CDS
TATTCAAACATCAGTGGTAC+TGG 0.383824 4_2:+61499025 Msa0612960:CDS
AGAGGAAGAAGAGGAGGAAG+AGG 0.388573 4_2:+61500097 Msa0612960:CDS
AGCCAAAGCTGTCATCTCTT+GGG 0.389562 4_2:+61497325 Msa0612960:CDS
TGGTTATCATCCTGGTGGCT+GGG 0.397033 4_2:+61498169 Msa0612960:CDS
GTTAGCGTTTGGTTCCTTAG+AGG 0.403156 4_2:-61494203 None:intergenic
CCCGTGCGATGGAGAGTTAT+AGG 0.405080 4_2:-61493992 None:intergenic
ATGACAGCTTTGGCTTTGTC+TGG 0.409816 4_2:-61497317 None:intergenic
AAGAAGTCAATGAAGTGAAA+AGG 0.410026 4_2:-61498322 None:intergenic
TTCAAGAATACCAACAACTT+TGG 0.411732 4_2:-61495845 None:intergenic
TGTCTGCATCTTGAGCAGTT+CGG 0.412182 4_2:+61498349 Msa0612960:CDS
GGTAGATAAAACAAAACATT+GGG 0.413170 4_2:+61500040 Msa0612960:CDS
AAGCCAAAGCTGTCATCTCT+TGG 0.416693 4_2:+61497324 Msa0612960:CDS
CACTTTACTGCCAGAGGAGT+TGG 0.419852 4_2:+61501065 Msa0612960:CDS
TCTTCGGAGGCGTTAGCGTT+TGG 0.427503 4_2:-61494214 None:intergenic
AGAAGTCAATGAAGTGAAAA+GGG 0.428583 4_2:-61498321 None:intergenic
AACTCATGTGATAACATGCC+AGG 0.430534 4_2:-61497931 None:intergenic
TTCAGCAGATCCAAAGTTGT+TGG 0.431447 4_2:+61495835 Msa0612960:CDS
ATCCAAGTATGTCTCATTAA+CGG 0.432808 4_2:-61501903 None:intergenic
CAATGTGTTGCTTGGAGTTA+CGG 0.433164 4_2:+61499303 Msa0612960:CDS
GGAGGAAGAAGAGGAAGAAG+AGG 0.435633 4_2:+61500088 Msa0612960:CDS
CAAGGGAGGAAGAGAAATTA+CGG 0.439241 4_2:+61501216 Msa0612960:CDS
AACAAAACATTGGGGTGACT+TGG 0.439536 4_2:+61500049 Msa0612960:CDS
GCGCGTGTAAGAAAGTTATT+GGG 0.444930 4_2:-61493955 None:intergenic
ACGGGCACCCAAGACAAGTC+AGG 0.445877 4_2:+61500897 Msa0612960:CDS
GGAAGAGGAGGAGGAAGAAG+AGG 0.449096 4_2:+61500079 Msa0612960:CDS
TCCCCAAGAGATGACAGCTT+TGG 0.450747 4_2:-61497327 None:intergenic
AAGGTCACGGGTTCAAGTCC+TGG 0.451424 4_2:+61501403 Msa0612960:intron
GTTATAGGAAGAATTCAGTT+AGG 0.452711 4_2:-61493977 None:intergenic
TTCCATGAGCAGCAGAGGAT+TGG 0.452921 4_2:+61501717 Msa0612960:three_prime_UTR
AGTTCCACTTTGCAATTAGA+GGG 0.453116 4_2:+61498445 Msa0612960:CDS
GGTTATCATCCTGGTGGCTG+GGG 0.453641 4_2:+61498170 Msa0612960:CDS
AGCCAATCCTCTGCTGCTCA+TGG 0.457489 4_2:-61501719 None:intergenic
GGAAGAGGAGGAAGAGGAGG+AGG 0.457668 4_2:+61500070 Msa0612960:CDS
CTCCGACAGTCGACAGTAGC+AGG 0.458381 4_2:-61499226 None:intergenic
TCCATTTCTCTCCAGTTATG+TGG 0.459234 4_2:+61500869 Msa0612960:intron
CTTGGAGTTACGGTCCCTAC+AGG 0.461222 4_2:+61499313 Msa0612960:CDS
ATAAAATCAGGAAGCTGAAA+AGG 0.461748 4_2:-61496456 None:intergenic
ATACCAACCTCGACAACATC+AGG 0.463820 4_2:-61495674 None:intergenic
CAAGTTGCTAAACACAGAAA+TGG 0.464641 4_2:+61493932 Msa0612960:five_prime_UTR
GAATGGGAGCATTCAAGCCG+GGG 0.467719 4_2:-61498130 None:intergenic
AGCAGAGCTATATGAAGGCT+TGG 0.468590 4_2:+61495244 Msa0612960:CDS
GAAAGACTCACTTGATAAAG+AGG 0.469037 4_2:-61500622 None:intergenic
CTCCAGTTATGTGGTTGGCA+CGG 0.469111 4_2:+61500878 Msa0612960:intron
GTAGTTCCAAGCAAAGTTCC+AGG 0.471231 4_2:-61500749 None:intergenic
ATTTGGTCGGATTCACGAAT+GGG 0.472463 4_2:-61494035 None:intergenic
CATTTACCTGCAAAATAAAG+AGG 0.473109 4_2:-61501656 None:intergenic
CCTGTGGCAGCAATAAAATC+AGG 0.473988 4_2:-61496468 None:intergenic
GCAAGATCAGCCTAATTATG+AGG 0.475324 4_2:+61498408 Msa0612960:CDS
TCCAGTTATGTGGTTGGCAC+GGG 0.478302 4_2:+61500879 Msa0612960:intron
TGACACCAGTGCCTGGGTAC+AGG 0.479653 4_2:-61495887 None:intergenic
ACAACAACACCAACAACAAC+AGG 0.480064 4_2:+61494270 Msa0612960:CDS
GGAATGGGAGCATTCAAGCC+GGG 0.481313 4_2:-61498131 None:intergenic
CTGTGATGAGGGTAAAGATC+AGG 0.484562 4_2:+61499260 Msa0612960:CDS
AGAATGAGAAGAAGAGGAAG+AGG 0.486246 4_2:+61501573 Msa0612960:intron
GGGAATGGGAGCATTCAAGC+CGG 0.489352 4_2:-61498132 None:intergenic
CCATCGTTGCGGGATTTGGT+CGG 0.491412 4_2:-61494048 None:intergenic
TGATAACCAAAACTAGCTCC+TGG 0.491641 4_2:-61498155 None:intergenic
GGAAGAAGACATCGAGGAGG+AGG 0.492383 4_2:+61500118 Msa0612960:CDS
TGATGCAGAATGAGAAGAAG+AGG 0.492413 4_2:+61501567 Msa0612960:intron
AAAGTTGAAACAAAAGCAAC+GGG 0.492868 4_2:+61497100 Msa0612960:CDS
TTTCTCTCCAGTTATGTGGT+TGG 0.493505 4_2:+61500873 Msa0612960:intron
GGAAGAAGAGGAAGAAGAGG+AGG 0.494055 4_2:+61500091 Msa0612960:CDS
GCGACCGTCGTCGCCGTCGC+CGG 0.496606 4_2:+61494158 Msa0612960:CDS
ATTCATTCTCCAGTGAAAAG+AGG 0.496758 4_2:+61499078 Msa0612960:CDS
TTTGGAGCCAAGATCTCCGT+TGG 0.497901 4_2:-61494107 None:intergenic
GATCAGCCTAATTATGAGGT+TGG 0.500033 4_2:+61498412 Msa0612960:CDS
TGGGTACAGGTACAGTATTT+CGG 0.500237 4_2:-61495874 None:intergenic
TCCATGACATCCAACTCCTC+TGG 0.503135 4_2:-61501075 None:intergenic
GCCAGAGGAGTTGGATGTCA+TGG 0.505402 4_2:+61501074 Msa0612960:CDS
GGAGGCTTGCCCCAGCCACC+AGG 0.505676 4_2:-61498179 None:intergenic
GTTACTTAGTTTCTGTGATG+AGG 0.507935 4_2:+61499248 Msa0612960:CDS
GTGTTATGGTCTCTCCTGTA+GGG 0.510568 4_2:-61499327 None:intergenic
TATCTAGGATAATGATAAGA+AGG 0.513629 4_2:+61495400 Msa0612960:intron
ATCTTCAGAGAAGGGTATGA+TGG 0.513760 4_2:-61498107 None:intergenic
AGATGAGAACCTGTTGTTGT+TGG 0.518447 4_2:-61494279 None:intergenic
TGGCACTGCAATGTGTTGCT+TGG 0.519023 4_2:+61499295 Msa0612960:CDS
ATCCGTTAATGAGACATACT+TGG 0.521806 4_2:+61501901 Msa0612960:three_prime_UTR
CAGCGAGGTTATTGATTCAG+AGG 0.524730 4_2:+61495304 Msa0612960:CDS
GATTTGGTCGGATTCACGAA+TGG 0.524887 4_2:-61494036 None:intergenic
CTTGGAAGAGGAGGAAGAGG+AGG 0.526037 4_2:+61500067 Msa0612960:CDS
CGTTTCTGCGGCCATCGTTG+CGG 0.527700 4_2:-61494059 None:intergenic
TTACTTAGTTTCTGTGATGA+GGG 0.531389 4_2:+61499249 Msa0612960:CDS
AATTAGGCTGATCTTGCTGA+TGG 0.532430 4_2:-61498402 None:intergenic
CGGGCACCCAAGACAAGTCA+GGG 0.533145 4_2:+61500898 Msa0612960:CDS
TCAAAAGAGAAAATTTCTGC+AGG 0.533803 4_2:+61495907 Msa0612960:CDS
GAGGGTGGGTTCCCGTGCGA+TGG 0.534032 4_2:-61494003 None:intergenic
TCATGAAGGAAAAGAATTTG+AGG 0.534425 4_2:+61497356 Msa0612960:CDS
GGTGTTATGGTCTCTCCTGT+AGG 0.535629 4_2:-61499328 None:intergenic
TCCTATAACTCTCCATCGCA+CGG 0.537639 4_2:+61493991 Msa0612960:five_prime_UTR
GCTTCCGGCGACGGCGACGA+CGG 0.537767 4_2:-61494162 None:intergenic
TTACGAAGGTCAATAACATC+AGG 0.537927 4_2:-61500574 None:intergenic
AAGTTGAGGGAGATGAAACC+TGG 0.539261 4_2:+61497913 Msa0612960:CDS
GCTATATGAAGGCTTGGATG+AGG 0.545895 4_2:+61495250 Msa0612960:CDS
TACCCTTCTCTGAAGATCCC+CGG 0.547560 4_2:+61498113 Msa0612960:CDS
GAGGAGGAGGCACTTGAAGA+TGG 0.549207 4_2:+61500131 Msa0612960:CDS
CTGTACCTGTACCCAGGCAC+TGG 0.549555 4_2:+61495882 Msa0612960:CDS
TCCGTGGCTTATTAACATGC+AGG 0.549813 4_2:+61497990 Msa0612960:CDS
CATGAGTTGAAAGAAGCTCT+TGG 0.550562 4_2:+61497946 Msa0612960:CDS
TGAAGGACATTGTACACGGC+TGG 0.553486 4_2:+61498999 Msa0612960:intron
ACCCTGCTACTGTCGACTGT+CGG 0.560471 4_2:+61499224 Msa0612960:CDS
CGCACGGGAACCCACCCTCT+CGG 0.561029 4_2:+61494007 Msa0612960:five_prime_UTR
CGCAAGGCCTGATGTTGTCG+AGG 0.562446 4_2:+61495667 Msa0612960:CDS
GGGCAAGCCTCCTGTTGATG+AGG 0.562702 4_2:+61498190 Msa0612960:CDS
AAAGGGATGCATATGTCTTG+TGG 0.563021 4_2:+61501980 Msa0612960:three_prime_UTR
CTTGGGGACTTGTATCATGA+AGG 0.563151 4_2:+61497342 Msa0612960:CDS
CACGGAGGAGGAGAACCCTC+AGG 0.564156 4_2:-61497973 None:intergenic
TCTCACAATGCAGGAAGAGC+CGG 0.564626 4_2:+61500019 Msa0612960:intron
GCAGGCTTATATTGAGAAAG+AGG 0.564885 4_2:+61497070 Msa0612960:intron
AGTTGAAATTGAGTATGTAC+CGG 0.570225 4_2:+61495217 Msa0612960:CDS
CCTTCCTCTGCTCCTTACGA+AGG 0.570728 4_2:-61500588 None:intergenic
ACATTGGGGTGACTTGGAAG+AGG 0.570852 4_2:+61500055 Msa0612960:CDS
GGCAGACTCTGATTCTGAAG+AGG 0.573433 4_2:+61495457 Msa0612960:CDS
TTTGTGTTCAGCTTCAACGC+AGG 0.573485 4_2:+61495615 Msa0612960:intron
TGATGTTATTGACCTTCGTA+AGG 0.573751 4_2:+61500576 Msa0612960:CDS
GATAACCAAAACTAGCTCCT+GGG 0.574197 4_2:-61498154 None:intergenic
ACCTGCATGTTAATAAGCCA+CGG 0.574698 4_2:-61497991 None:intergenic
TGCTGTGCAGGTAAAGTTGA+GGG 0.575661 4_2:+61497900 Msa0612960:intron
GCCAAAGCTGTCATCTCTTG+GGG 0.575826 4_2:+61497326 Msa0612960:CDS
AAAAGTTGAAACAAAAGCAA+CGG 0.576402 4_2:+61497099 Msa0612960:CDS
GCGTGAGGATTTCAGTGACA+TGG 0.578706 4_2:+61501244 Msa0612960:CDS
ATGTTAATAAGCCACGGAGG+AGG 0.579470 4_2:-61497985 None:intergenic
AGAGAAGGGTATGATGGTGG+AGG 0.580603 4_2:-61498101 None:intergenic
AGGTCAAAAGACAGATAGAG+TGG 0.585081 4_2:+61501038 Msa0612960:CDS
GAAACGCTAGTGCATCAAAA+CGG 0.585607 4_2:+61494076 Msa0612960:CDS
AGGAATTGAGAAAATCAGAC+AGG 0.586031 4_2:+61496488 Msa0612960:CDS
ATTCAAACATCAGTGGTACT+GGG 0.587907 4_2:+61499026 Msa0612960:CDS
ATTCCAGGTATAATGAAGCA+AGG 0.588332 4_2:+61501198 Msa0612960:intron
CGGTAGATAAAACAAAACAT+TGG 0.596063 4_2:+61500039 Msa0612960:CDS
AAGCCGGGGATCTTCAGAGA+AGG 0.598863 4_2:-61498116 None:intergenic
TCATGTGACTGAAAGGTCAC+GGG 0.600522 4_2:+61501391 Msa0612960:intron
TTGACCTTCGTAAGGAGCAG+AGG 0.605333 4_2:+61500584 Msa0612960:CDS
TGCTTCAGTATCGTCTTCGG+AGG 0.605349 4_2:-61494227 None:intergenic
AGCTGAAACAGATTAGCGCA+AGG 0.606301 4_2:+61495651 Msa0612960:CDS
TTGTTGAAGGACATTGTACA+CGG 0.606912 4_2:+61498995 Msa0612960:intron
CCGACCAAATCCCGCAACGA+TGG 0.607114 4_2:+61494048 Msa0612960:exon
GAAGTCAATGAAGTGAAAAG+GGG 0.609772 4_2:-61498320 None:intergenic
TTTCAGCACACCGACTGGGG+TGG 0.609891 4_2:+61500546 Msa0612960:intron
TTCCAGGTATAATGAAGCAA+GGG 0.612990 4_2:+61501199 Msa0612960:intron
TAATGATAAGAAGGATGAGT+CGG 0.614751 4_2:+61495409 Msa0612960:CDS
GTTCCACTTTGCAATTAGAG+GGG 0.615223 4_2:+61498446 Msa0612960:CDS
AATGGGATTAACCGAGAGGG+TGG 0.615569 4_2:-61494018 None:intergenic
CAGGTATAATGAAGCAAGGG+AGG 0.616235 4_2:+61501202 Msa0612960:intron
CCTTCGTAAGGAGCAGAGGA+AGG 0.617282 4_2:+61500588 Msa0612960:CDS
TCCGACAGTCGACAGTAGCA+GGG 0.617884 4_2:-61499225 None:intergenic
AGCCGGGGATCTTCAGAGAA+GGG 0.618935 4_2:-61498115 None:intergenic
TTCAGAGAAGGGTATGATGG+TGG 0.620896 4_2:-61498104 None:intergenic
GAAGCTCTTGGTATGCCTGA+GGG 0.621141 4_2:+61497958 Msa0612960:CDS
ATAACCAAAACTAGCTCCTG+GGG 0.621290 4_2:-61498153 None:intergenic
AAGTCAATGAAGTGAAAAGG+GGG 0.621759 4_2:-61498319 None:intergenic
TTGGGGTGACTTGGAAGAGG+AGG 0.622268 4_2:+61500058 Msa0612960:CDS
TTGATGCACTAGCGTTTCTG+CGG 0.622746 4_2:-61494071 None:intergenic
CAAAACGGTGTCGTTTCCAA+CGG 0.624242 4_2:+61494091 Msa0612960:CDS
GGATGTCACTTTACTGCCAG+AGG 0.626847 4_2:+61501059 Msa0612960:CDS
AGAAGCTCTTGGTATGCCTG+AGG 0.628417 4_2:+61497957 Msa0612960:CDS
CCTATAACTCTCCATCGCAC+GGG 0.629423 4_2:+61493992 Msa0612960:five_prime_UTR
AGCAGAGGAAGGAACCTGAA+AGG 0.633570 4_2:+61500599 Msa0612960:CDS
TTGCTGTGCAGGTAAAGTTG+AGG 0.634564 4_2:+61497899 Msa0612960:intron
CTGAGGGTTCTCCTCCTCCG+TGG 0.646863 4_2:+61497974 Msa0612960:CDS
TTTCAGTGACATGGTTGCTG+AGG 0.651024 4_2:+61501253 Msa0612960:CDS
TCAGGTGTCTCCACCCCAGT+CGG 0.652819 4_2:-61500556 None:intergenic
AGATCAGGACAGATCTTCAG+TGG 0.653924 4_2:+61499275 Msa0612960:CDS
TTGCAGGTAAATGGAAGACG+TGG 0.661332 4_2:+61501666 Msa0612960:three_prime_UTR
AATCTGTTGATAGTATGTCA+AGG 0.663316 4_2:+61500159 Msa0612960:CDS
TTACCCCTCTAATTGCAAAG+TGG 0.664208 4_2:-61498449 None:intergenic
CTACTCATGTGATGATACGA+TGG 0.666091 4_2:+61501822 Msa0612960:three_prime_UTR
AAATGTACCTCATCAACAGG+AGG 0.667002 4_2:-61498197 None:intergenic
GGAAGAGGAAGAAGACATCG+AGG 0.667297 4_2:+61500112 Msa0612960:CDS
ACGAATGGGATTAACCGAGA+GGG 0.668178 4_2:-61494021 None:intergenic
GAAATTACGGAGTCAGCGTG+AGG 0.668821 4_2:+61501229 Msa0612960:CDS
TGGTTCTATTCAAACATCAG+TGG 0.676712 4_2:+61499019 Msa0612960:CDS
ATGGGATTAACCGAGAGGGT+GGG 0.684890 4_2:-61494017 None:intergenic
ACTGGAGAATGAATCAAGTG+AGG 0.687111 4_2:-61499069 None:intergenic
CACGAATGGGATTAACCGAG+AGG 0.689518 4_2:-61494022 None:intergenic
GAAATACTGTACCTGTACCC+AGG 0.689923 4_2:+61495876 Msa0612960:CDS
AGAGGAAGAAGACATCGAGG+AGG 0.690665 4_2:+61500115 Msa0612960:CDS
TGAGAAATTTAGTTTCAGCG+AGG 0.695992 4_2:+61495289 Msa0612960:CDS
GGGCACCCAAGACAAGTCAG+GGG 0.712783 4_2:+61500899 Msa0612960:CDS
GTAGATAAAACAAAACATTG+GGG 0.731406 4_2:+61500041 Msa0612960:CDS
TAACCAAAACTAGCTCCTGG+GGG 0.736524 4_2:-61498152 None:intergenic
TGCATGTTAATAAGCCACGG+AGG 0.791690 4_2:-61497988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTTTCATTTTA+AGG + chr4_2:61495799-61495818 Msa0612960:intron 10.0%
!!! ATTTTTTTGTGTAATTTAAT+TGG + chr4_2:61496219-61496238 Msa0612960:intron 10.0%
!!! TTTTTTTGTGTAATTTAATT+GGG + chr4_2:61496220-61496239 Msa0612960:intron 10.0%
!!! TATTTTTCAAATATTTGTAA+AGG + chr4_2:61497554-61497573 Msa0612960:intron 10.0%
!!! AATTTTTTTTTTTTTGTGAA+TGG + chr4_2:61497789-61497808 Msa0612960:intron 10.0%
!! TTTATGTAAAATAATAATCA+TGG + chr4_2:61498249-61498268 Msa0612960:intron 10.0%
!! TTATGTAAAATAATAATCAT+GGG + chr4_2:61498250-61498269 Msa0612960:intron 10.0%
!! CAAAAAATAATTATAAAACT+AGG + chr4_2:61498826-61498845 Msa0612960:intron 10.0%
!! ATAATATAAATGTTGAAATT+TGG + chr4_2:61499732-61499751 Msa0612960:intron 10.0%
!! TAATATAAATGTTGAAATTT+GGG + chr4_2:61499733-61499752 Msa0612960:intron 10.0%
!! TTTAGCAAATATTAAATTTA+AGG - chr4_2:61500424-61500443 None:intergenic 10.0%
!!! CATTATTTTACAAAAATTTT+CGG + chr4_2:61501313-61501332 Msa0612960:intron 10.0%
!! AAATAAGCAAATAAAAAAAA+GGG - chr4_2:61501534-61501553 None:intergenic 10.0%
!! TAAATAAGCAAATAAAAAAA+AGG - chr4_2:61501535-61501554 None:intergenic 10.0%
!! ATTATTGAAAAAAATGCAAT+GGG - chr4_2:61494640-61494659 None:intergenic 15.0%
!! TATTATTGAAAAAAATGCAA+TGG - chr4_2:61494641-61494660 None:intergenic 15.0%
!!! ATATATAGATAAAACACTTT+TGG + chr4_2:61494844-61494863 Msa0612960:intron 15.0%
!!! AAAAAAGAAGAAAATTTTGA+GGG + chr4_2:61494883-61494902 Msa0612960:intron 15.0%
!! TAAAACTTTAAGCATAATTA+TGG - chr4_2:61495594-61495613 None:intergenic 15.0%
!!! ACATTCTAAATTGATAATTA+TGG + chr4_2:61495937-61495956 Msa0612960:intron 15.0%
!! AATAAAAGATAAATGATTCA+AGG - chr4_2:61496139-61496158 None:intergenic 15.0%
!! TTATTAATTATAAAACAGTG+AGG - chr4_2:61496336-61496355 None:intergenic 15.0%
!!! TTTTAATTGAAAGTCAAAAT+AGG + chr4_2:61497667-61497686 Msa0612960:intron 15.0%
!! AAAAAAATTGTATTTGACAA+AGG - chr4_2:61497778-61497797 None:intergenic 15.0%
!! ATTATATCGAAAATCATAAA+GGG - chr4_2:61498504-61498523 None:intergenic 15.0%
!! TATTATATCGAAAATCATAA+AGG - chr4_2:61498505-61498524 None:intergenic 15.0%
!!! ATTCATTTTATTTTTTGTTC+TGG + chr4_2:61498644-61498663 Msa0612960:intron 15.0%
!! AAACGGAAAAAAAATTAAAA+TGG - chr4_2:61498689-61498708 None:intergenic 15.0%
!!! AACGTTATATTTTATAAGAA+GGG - chr4_2:61499700-61499719 None:intergenic 15.0%
!!! AAACGTTATATTTTATAAGA+AGG - chr4_2:61499701-61499720 None:intergenic 15.0%
!! AAAAAATATAAATCCAAGAA+AGG - chr4_2:61500485-61500504 None:intergenic 15.0%
!!! TTTTATCATATTTTCTGTTA+AGG + chr4_2:61500697-61500716 Msa0612960:intron 15.0%
!!! ATTTTTGTAAAATAATGTAC+AGG - chr4_2:61501310-61501329 None:intergenic 15.0%
!! CTAGAAATTAATTGTGAAAT+TGG + chr4_2:61494357-61494376 Msa0612960:intron 20.0%
!!! GATTTTTATGATTCTTAATG+AGG + chr4_2:61494452-61494471 Msa0612960:intron 20.0%
!!! AATAATAATTTTACCTCATG+TGG + chr4_2:61494654-61494673 Msa0612960:intron 20.0%
!!! ATAATAATTTTACCTCATGT+GGG + chr4_2:61494655-61494674 Msa0612960:intron 20.0%
!!! CAAAAAAGAAGAAAATTTTG+AGG + chr4_2:61494882-61494901 Msa0612960:intron 20.0%
!!! AAAAAGAAGAAAATTTTGAG+GGG + chr4_2:61494884-61494903 Msa0612960:intron 20.0%
!! AGTGTTAATTATATAGCATT+TGG - chr4_2:61495136-61495155 None:intergenic 20.0%
!! AAATGCAATTACAAAGAAAA+AGG + chr4_2:61495436-61495455 Msa0612960:CDS 20.0%
!! TTGGTATATGTGTTATATAT+TGG + chr4_2:61495690-61495709 Msa0612960:intron 20.0%
!! AAAAAACTGTTGCATAAAAT+TGG - chr4_2:61495785-61495804 None:intergenic 20.0%
!! TATTTCTTTATTAGATTGCA+TGG + chr4_2:61496155-61496174 Msa0612960:intron 20.0%
!! ATTTCTTTATTAGATTGCAT+GGG + chr4_2:61496156-61496175 Msa0612960:intron 20.0%
!!! AAACAATTTATTGATTTTGC+AGG + chr4_2:61496410-61496429 Msa0612960:intron 20.0%
!!! AACAATTTATTGATTTTGCA+GGG + chr4_2:61496411-61496430 Msa0612960:intron 20.0%
!!! TACACACTTTTTGTTTATAT+TGG + chr4_2:61496864-61496883 Msa0612960:intron 20.0%
!! AAATTAGAAAAAGGTAAAGA+GGG - chr4_2:61497177-61497196 None:intergenic 20.0%
!! AAAATTAGAAAAAGGTAAAG+AGG - chr4_2:61497178-61497197 None:intergenic 20.0%
!!! TTTTTTAAACCCGTAATTTA+AGG + chr4_2:61497445-61497464 Msa0612960:intron 20.0%
!! ACTAAATAGACCTTAAATTA+CGG - chr4_2:61497458-61497477 None:intergenic 20.0%
!!! TTTTTTTTTTTGTGAATGGT+TGG + chr4_2:61497793-61497812 Msa0612960:intron 20.0%
!! TTTCAAACATCAATTGTAAA+GGG - chr4_2:61498536-61498555 None:intergenic 20.0%
!! GATAATGCATTTGAAAATTT+AGG + chr4_2:61498577-61498596 Msa0612960:intron 20.0%
!!! TTAGTTTTATAATAGAGCAA+GGG - chr4_2:61498794-61498813 None:intergenic 20.0%
!! TTGTTCCTATAATTCAATAA+TGG + chr4_2:61498861-61498880 Msa0612960:intron 20.0%
!!! ACGTTATATTTTATAAGAAG+GGG - chr4_2:61499699-61499718 None:intergenic 20.0%
!!! ATTATTTTTGTCAATAGTCT+AGG + chr4_2:61500230-61500249 Msa0612960:intron 20.0%
!!! TAGGTTCTTTTTATTTGTTT+TGG + chr4_2:61500249-61500268 Msa0612960:intron 20.0%
!! TCTATTTGCTTATTTAATGA+GGG + chr4_2:61501338-61501357 Msa0612960:intron 20.0%
!!! AAAAAAGACTTCAAGTTTTA+AGG + chr4_2:61501623-61501642 Msa0612960:CDS 20.0%
!! ATCTTGAGTGAAATTTTAGA+GGG + chr4_2:61494505-61494524 Msa0612960:intron 25.0%
! TATTGAAAAATACGATGTGA+AGG - chr4_2:61494691-61494710 None:intergenic 25.0%
! AAACAAAAAATGACAACTCT+CGG + chr4_2:61494735-61494754 Msa0612960:intron 25.0%
! ATAATGTCAGTTGTATCTAA+TGG - chr4_2:61494809-61494828 None:intergenic 25.0%
! TAGATACAACTGACATTATT+TGG + chr4_2:61494810-61494829 Msa0612960:intron 25.0%
! AGATACAACTGACATTATTT+GGG + chr4_2:61494811-61494830 Msa0612960:intron 25.0%
! TTCCCAAACTAATAAATTCA+GGG - chr4_2:61494945-61494964 None:intergenic 25.0%
!! TAACCATTCCATTCAAATTT+TGG + chr4_2:61495028-61495047 Msa0612960:intron 25.0%
! AAATACGCATAACTATCAAT+TGG - chr4_2:61495159-61495178 None:intergenic 25.0%
!! TGTCATCTGTCTTAAATTTT+AGG + chr4_2:61495184-61495203 Msa0612960:intron 25.0%
! TGTTTGATAAATTGTTTGCT+TGG + chr4_2:61495374-61495393 Msa0612960:intron 25.0%
!! TATCTAGGATAATGATAAGA+AGG + chr4_2:61495400-61495419 Msa0612960:intron 25.0%
! GACTCAAAAAAATCTACAAT+TGG - chr4_2:61495721-61495740 None:intergenic 25.0%
!!! TTCTTTTTCATTTTAAGGTG+TGG + chr4_2:61495804-61495823 Msa0612960:intron 25.0%
!!! TCTTTTTCATTTTAAGGTGT+GGG + chr4_2:61495805-61495824 Msa0612960:intron 25.0%
! TTCTCTTATATGTATGTATG+TGG + chr4_2:61496048-61496067 Msa0612960:intron 25.0%
! TGGGCATTTATTTATAACTA+AGG + chr4_2:61496239-61496258 Msa0612960:intron 25.0%
!!! ACAATTTATTGATTTTGCAG+GGG + chr4_2:61496412-61496431 Msa0612960:intron 25.0%
! TAATTTGATGTGTGTCTATT+TGG + chr4_2:61496620-61496639 Msa0612960:intron 25.0%
! TTGCTAATTAATTCAACAAC+TGG + chr4_2:61496690-61496709 Msa0612960:intron 25.0%
!!! TTACTGTTGTTTCAAAATCA+TGG + chr4_2:61496716-61496735 Msa0612960:intron 25.0%
! GTGTCATAAGACAAATTATT+GGG + chr4_2:61496738-61496757 Msa0612960:intron 25.0%
! TGTCATAAGACAAATTATTG+GGG + chr4_2:61496739-61496758 Msa0612960:intron 25.0%
!!! TGATTTTTAATTGTTAGCTG+TGG + chr4_2:61496767-61496786 Msa0612960:intron 25.0%
! TGAGAAAATGTAAGATAACT+TGG - chr4_2:61497049-61497068 None:intergenic 25.0%
! AAAAGTTGAAACAAAAGCAA+CGG + chr4_2:61497099-61497118 Msa0612960:CDS 25.0%
! AATGGTGCAAAATTAGAAAA+AGG - chr4_2:61497186-61497205 None:intergenic 25.0%
! CTAAATAGACCTTAAATTAC+GGG - chr4_2:61497457-61497476 None:intergenic 25.0%
! TGCAAATTAAAAGTGAATAC+AGG - chr4_2:61497506-61497525 None:intergenic 25.0%
!! TCCACTTCGTTTTATATTTT+CGG - chr4_2:61497634-61497653 None:intergenic 25.0%
! CATAGTTTCTCAAACTAAAT+AGG + chr4_2:61497700-61497719 Msa0612960:intron 25.0%
!! TGAATTTTCGTTTTCATGAA+GGG + chr4_2:61498277-61498296 Msa0612960:intron 25.0%
!! AAACTTTGGAGGATTATATA+GGG - chr4_2:61498481-61498500 None:intergenic 25.0%
! AAAATCATAAAGGGAAACTT+TGG - chr4_2:61498495-61498514 None:intergenic 25.0%
! GTTTCAAACATCAATTGTAA+AGG - chr4_2:61498537-61498556 None:intergenic 25.0%
!! TACAATTGATGTTTGAAACT+AGG + chr4_2:61498538-61498557 Msa0612960:intron 25.0%
!! TTTTCAAATGCATTATCCAA+AGG - chr4_2:61498574-61498593 None:intergenic 25.0%
!!! CTTAGTTTTATAATAGAGCA+AGG - chr4_2:61498795-61498814 None:intergenic 25.0%
! ATTATGAAACTACATTTCCT+GGG - chr4_2:61499464-61499483 None:intergenic 25.0%
! AATTAAAATTCCACCAAAAC+AGG - chr4_2:61499491-61499510 None:intergenic 25.0%
! AAACAGTGTTTGAATTAGAT+CGG - chr4_2:61499541-61499560 None:intergenic 25.0%
!! TATTTTATAAGAAGGGGATT+CGG - chr4_2:61499693-61499712 None:intergenic 25.0%
! TCTTTGTTAATACACAACAT+AGG + chr4_2:61499949-61499968 Msa0612960:intron 25.0%
! CATGTATGTAAAATGTAACT+AGG - chr4_2:61499998-61500017 None:intergenic 25.0%
!!! CAATGTTTTGTTTTATCTAC+CGG - chr4_2:61500041-61500060 None:intergenic 25.0%
! GGTAGATAAAACAAAACATT+GGG + chr4_2:61500040-61500059 Msa0612960:CDS 25.0%
! GTAGATAAAACAAAACATTG+GGG + chr4_2:61500041-61500060 Msa0612960:CDS 25.0%
! TACAGAGAGAATTATAAACA+TGG - chr4_2:61500452-61500471 None:intergenic 25.0%
! GTATTGTATCTTGATAAACT+CGG + chr4_2:61500843-61500862 Msa0612960:intron 25.0%
! CTCTATTTGCTTATTTAATG+AGG + chr4_2:61501337-61501356 Msa0612960:intron 25.0%
!!! AAACTTGAAGTCTTTTTTCT+TGG - chr4_2:61501621-61501640 None:intergenic 25.0%
!!! GCATGTTGTTTTTATTGTTT+TGG + chr4_2:61501788-61501807 Msa0612960:three_prime_UTR 25.0%
! ATGATTTACATCTTATGTTC+TGG + chr4_2:61501924-61501943 Msa0612960:three_prime_UTR 25.0%
GTTATAGGAAGAATTCAGTT+AGG - chr4_2:61493980-61493999 None:intergenic 30.0%
!! CTTATTCTTTGAGATCACTT+TGG + chr4_2:61494304-61494323 Msa0612960:intron 30.0%
GTTAGGTTTACAATCGAAAT+TGG + chr4_2:61494326-61494345 Msa0612960:intron 30.0%
!! TAATTTGCTACAGTGAAGTT+AGG + chr4_2:61494397-61494416 Msa0612960:intron 30.0%
!! AATTTGCTACAGTGAAGTTA+GGG + chr4_2:61494398-61494417 Msa0612960:intron 30.0%
GAAGCTTGATTAATCATTAG+TGG + chr4_2:61494476-61494495 Msa0612960:intron 30.0%
! GATCTTGAGTGAAATTTTAG+AGG + chr4_2:61494504-61494523 Msa0612960:intron 30.0%
TTGAAAAAAATGCAATGGGA+AGG - chr4_2:61494636-61494655 None:intergenic 30.0%
AACAAAAAATGACAACTCTC+GGG + chr4_2:61494736-61494755 Msa0612960:intron 30.0%
!!! GAGTTTATTTTGCAAGTGAA+TGG - chr4_2:61494775-61494794 None:intergenic 30.0%
GATACAACTGACATTATTTG+GGG + chr4_2:61494812-61494831 Msa0612960:intron 30.0%
TCCCAAACTAATAAATTCAG+GGG - chr4_2:61494944-61494963 None:intergenic 30.0%
CTTCCCAAACTAATAAATTC+AGG - chr4_2:61494946-61494965 None:intergenic 30.0%
GAATGGAATGGTTACAAAAA+TGG - chr4_2:61495022-61495041 None:intergenic 30.0%
TAGCCAAAATTTGAATGGAA+TGG - chr4_2:61495034-61495053 None:intergenic 30.0%
ACTAGTAGCCAAAATTTGAA+TGG - chr4_2:61495039-61495058 None:intergenic 30.0%
! CTCTTTTATCAAAGGAAATG+TGG - chr4_2:61495090-61495109 None:intergenic 30.0%
CATTTCCTTTGATAAAAGAG+TGG + chr4_2:61495090-61495109 Msa0612960:intron 30.0%
AGTTGAAATTGAGTATGTAC+CGG + chr4_2:61495217-61495236 Msa0612960:CDS 30.0%
TAATGATAAGAAGGATGAGT+CGG + chr4_2:61495409-61495428 Msa0612960:CDS 30.0%
AGTCTCAAACAAGAAGAAAA+AGG + chr4_2:61495511-61495530 Msa0612960:CDS 30.0%
CAGACTAAAAAGTAAGAATG+AGG - chr4_2:61495743-61495762 None:intergenic 30.0%
!!! CTCATTCTTACTTTTTAGTC+TGG + chr4_2:61495741-61495760 Msa0612960:intron 30.0%
TTGCATAAAATTGGCACAAT+GGG - chr4_2:61495776-61495795 None:intergenic 30.0%
TTCAAGAATACCAACAACTT+TGG - chr4_2:61495848-61495867 None:intergenic 30.0%
TCAAAAGAGAAAATTTCTGC+AGG + chr4_2:61495907-61495926 Msa0612960:CDS 30.0%
TTATGGTCAACTAATGTATG+TGG + chr4_2:61495986-61496005 Msa0612960:intron 30.0%
TATGGTCAACTAATGTATGT+GGG + chr4_2:61495987-61496006 Msa0612960:intron 30.0%
TTAGGAAGATAACATCGATA+TGG + chr4_2:61496024-61496043 Msa0612960:intron 30.0%
TATTAGATTGCATGGGAATA+TGG + chr4_2:61496163-61496182 Msa0612960:intron 30.0%
ATTAGATTGCATGGGAATAT+GGG + chr4_2:61496164-61496183 Msa0612960:intron 30.0%
! AATATGGGTGTTGTATAACA+TGG + chr4_2:61496179-61496198 Msa0612960:intron 30.0%
! ATATGGGTGTTGTATAACAT+GGG + chr4_2:61496180-61496199 Msa0612960:intron 30.0%
ATAAAATCAGGAAGCTGAAA+AGG - chr4_2:61496459-61496478 None:intergenic 30.0%
GAATATTACTTTCCTCTAGT+GGG - chr4_2:61496564-61496583 None:intergenic 30.0%
! GGTGTCATAAGACAAATTAT+TGG + chr4_2:61496737-61496756 Msa0612960:intron 30.0%
! AATATTGATTGTCTTCTGAC+TGG + chr4_2:61496888-61496907 Msa0612960:intron 30.0%
AATGAACAACAGATGTAGAT+CGG - chr4_2:61496929-61496948 None:intergenic 30.0%
AAAGTTGAAACAAAAGCAAC+GGG + chr4_2:61497100-61497119 Msa0612960:CDS 30.0%
! GAAGATGGATATTGATTATC+AGG + chr4_2:61497145-61497164 Msa0612960:CDS 30.0%
AAGTATGCAAGCTAAGAAAA+TGG - chr4_2:61497204-61497223 None:intergenic 30.0%
AAACAAAGTCACTTGAGAAA+GGG - chr4_2:61497259-61497278 None:intergenic 30.0%
TCATGAAGGAAAAGAATTTG+AGG + chr4_2:61497356-61497375 Msa0612960:CDS 30.0%
TCCGAAAATATAAAACGAAG+TGG + chr4_2:61497630-61497649 Msa0612960:intron 30.0%
GTGAGAAAAAAAACAGCAAA+TGG - chr4_2:61497726-61497745 None:intergenic 30.0%
!! TTTGTGAATGGTTGGTTTAA+AGG + chr4_2:61497801-61497820 Msa0612960:intron 30.0%
AATACACTTAAACAGACCAA+TGG - chr4_2:61497859-61497878 None:intergenic 30.0%
GGAAAACAGATGAAATTGTA+AGG - chr4_2:61498064-61498083 None:intergenic 30.0%
!!! GTTTTCCTTTTTCAGAGATA+CGG + chr4_2:61498077-61498096 Msa0612960:intron 30.0%
AAAAAATGTACCTCATCAAC+AGG - chr4_2:61498203-61498222 None:intergenic 30.0%
! CTGAATTTTCGTTTTCATGA+AGG + chr4_2:61498276-61498295 Msa0612960:intron 30.0%
! GAATTTTCGTTTTCATGAAG+GGG + chr4_2:61498278-61498297 Msa0612960:intron 30.0%
AGAAGTCAATGAAGTGAAAA+GGG - chr4_2:61498324-61498343 None:intergenic 30.0%
AAGAAGTCAATGAAGTGAAA+AGG - chr4_2:61498325-61498344 None:intergenic 30.0%
TGTAAACCAACCTCATAATT+AGG - chr4_2:61498421-61498440 None:intergenic 30.0%
! GAAACTTTGGAGGATTATAT+AGG - chr4_2:61498482-61498501 None:intergenic 30.0%
! GTTTGAAACTAGGTTATGTT+TGG + chr4_2:61498548-61498567 Msa0612960:intron 30.0%
TGGCTCCATTATTGAATTAT+AGG - chr4_2:61498869-61498888 None:intergenic 30.0%
! TCAAATTTACCTCTTTTCAC+TGG - chr4_2:61499090-61499109 None:intergenic 30.0%
TTACTTAGTTTCTGTGATGA+GGG + chr4_2:61499249-61499268 Msa0612960:CDS 30.0%
GATTATGAAACTACATTTCC+TGG - chr4_2:61499465-61499484 None:intergenic 30.0%
! TTTCATAATCTCACCTGTTT+TGG + chr4_2:61499475-61499494 Msa0612960:intron 30.0%
!!! ATTTTAATTTCCTTGTGCCT+TGG + chr4_2:61499502-61499521 Msa0612960:intron 30.0%
!!! TTTTAATTTCCTTGTGCCTT+GGG + chr4_2:61499503-61499522 Msa0612960:intron 30.0%
AACAGTGTTTGAATTAGATC+GGG - chr4_2:61499540-61499559 None:intergenic 30.0%
ATATCAAGTGAATGTCAGTT+TGG - chr4_2:61499588-61499607 None:intergenic 30.0%
! ATTTTGTCGAGAAACTGTTA+TGG + chr4_2:61499608-61499627 Msa0612960:intron 30.0%
ATCTCTCTTTCTTTCTGATA+TGG + chr4_2:61499640-61499659 Msa0612960:intron 30.0%
TCTCTCTTTCTTTCTGATAT+GGG + chr4_2:61499641-61499660 Msa0612960:intron 30.0%
TAACAAAGAAACCTAGAACT+CGG - chr4_2:61499938-61499957 None:intergenic 30.0%
GTAAAATGTAACTAGGAATC+TGG - chr4_2:61499991-61500010 None:intergenic 30.0%
CGGTAGATAAAACAAAACAT+TGG + chr4_2:61500039-61500058 Msa0612960:CDS 30.0%
!! AATCTGTTGATAGTATGTCA+AGG + chr4_2:61500159-61500178 Msa0612960:CDS 30.0%
GCATAGTAAATGACTAATTG+AGG + chr4_2:61500276-61500295 Msa0612960:intron 30.0%
! GTATTGATAATAGCCTTTCT+TGG + chr4_2:61500469-61500488 Msa0612960:intron 30.0%
! GTTTTTCCTCTTTTTCTTCA+AGG - chr4_2:61500724-61500743 None:intergenic 30.0%
AATACTTGTGAGGGAAAAAA+AGG - chr4_2:61500828-61500847 None:intergenic 30.0%
TCAAGATACAATACTTGTGA+GGG - chr4_2:61500837-61500856 None:intergenic 30.0%
ATCAAGATACAATACTTGTG+AGG - chr4_2:61500838-61500857 None:intergenic 30.0%
! AGTTTCTTGCTCCTTTTTAT+GGG + chr4_2:61500942-61500961 Msa0612960:intron 30.0%
!! TAACGTGTTTTATTGTTTCC+AGG + chr4_2:61501002-61501021 Msa0612960:intron 30.0%
TATAAAACAGAAGTCATACC+TGG - chr4_2:61501115-61501134 None:intergenic 30.0%
ACGATGTTAACATCATTAAC+GGG - chr4_2:61501149-61501168 None:intergenic 30.0%
CACGATGTTAACATCATTAA+CGG - chr4_2:61501150-61501169 None:intergenic 30.0%
TATTTAATGAGGGATAACCT+TGG + chr4_2:61501348-61501367 Msa0612960:intron 30.0%
AAATAAAAAAAAGGGCAACC+CGG - chr4_2:61501526-61501545 None:intergenic 30.0%
!!! CTTCAAGTTTTAAGGTTGTT+CGG + chr4_2:61501631-61501650 Msa0612960:exon 30.0%
CATTTACCTGCAAAATAAAG+AGG - chr4_2:61501659-61501678 None:intergenic 30.0%
!!! CTCTTTATTTTGCAGGTAAA+TGG + chr4_2:61501657-61501676 Msa0612960:three_prime_UTR 30.0%
ATCCAAGTATGTCTCATTAA+CGG - chr4_2:61501906-61501925 None:intergenic 30.0%
TTTGGGCAAAAACTTCTAAA+TGG - chr4_2:61501962-61501981 None:intergenic 30.0%
! TTTAGAAGTTTTTGCCCAAA+AGG + chr4_2:61501962-61501981 Msa0612960:three_prime_UTR 30.0%
! TTAGAAGTTTTTGCCCAAAA+GGG + chr4_2:61501963-61501982 Msa0612960:three_prime_UTR 30.0%
CAAGTTGCTAAACACAGAAA+TGG + chr4_2:61493932-61493951 Msa0612960:five_prime_UTR 35.0%
!!! TTTTTTTACAGTGGCGGTTT+TGG - chr4_2:61494128-61494147 None:intergenic 35.0%
! TGGTGATTTTCTTTTGCTTC+CGG - chr4_2:61494180-61494199 None:intergenic 35.0%
! TTTTGCTTCAGTATCGTCTT+CGG - chr4_2:61494233-61494252 None:intergenic 35.0%
!! TCTTTGAGATCACTTTGGTT+AGG + chr4_2:61494309-61494328 Msa0612960:intron 35.0%
GCTTGATTAATCATTAGTGG+TGG + chr4_2:61494479-61494498 Msa0612960:intron 35.0%
TGATTAATCATTAGTGGTGG+TGG + chr4_2:61494482-61494501 Msa0612960:intron 35.0%
! AAGAACGAGTTTGTGCATTT+TGG + chr4_2:61494563-61494582 Msa0612960:intron 35.0%
!! AAGAAGAAAATTTTGAGGGG+TGG + chr4_2:61494887-61494906 Msa0612960:intron 35.0%
AGCCCCTGAATTTATTAGTT+TGG + chr4_2:61494939-61494958 Msa0612960:intron 35.0%
! GCCCCTGAATTTATTAGTTT+GGG + chr4_2:61494940-61494959 Msa0612960:intron 35.0%
AGCCTTTGATCTATTAACCT+TGG + chr4_2:61494964-61494983 Msa0612960:intron 35.0%
! CATTGCCACTCTTTTATCAA+AGG - chr4_2:61495098-61495117 None:intergenic 35.0%
! TAGCATTTGGTAACTTAAGC+TGG - chr4_2:61495123-61495142 None:intergenic 35.0%
!!! TCATATAGCTCTGCTTTTTC+CGG - chr4_2:61495239-61495258 None:intergenic 35.0%
GAAAAAGCAGAGCTATATGA+AGG + chr4_2:61495239-61495258 Msa0612960:CDS 35.0%
! TGAGAAATTTAGTTTCAGCG+AGG + chr4_2:61495289-61495308 Msa0612960:CDS 35.0%
TTGTTTGCTTGGATGTATCT+AGG + chr4_2:61495385-61495404 Msa0612960:intron 35.0%
GATAACGAGCAAAAAGAGAA+AGG + chr4_2:61495488-61495507 Msa0612960:CDS 35.0%
GTTGCATAAAATTGGCACAA+TGG - chr4_2:61495777-61495796 None:intergenic 35.0%
AGAGAAAATTTCTGCAGGTT+AGG + chr4_2:61495912-61495931 Msa0612960:intron 35.0%
TAGAGATGTAAACATGTTCG+AGG + chr4_2:61495962-61495981 Msa0612960:intron 35.0%
AGAGATGTAAACATGTTCGA+GGG + chr4_2:61495963-61495982 Msa0612960:intron 35.0%
ACTAATGTATGTGGGATGTA+TGG + chr4_2:61495995-61496014 Msa0612960:intron 35.0%
TATAAAACAGTGAGGCCAAT+TGG - chr4_2:61496328-61496347 None:intergenic 35.0%
! TCTGATTTTCTCAATTCCTG+TGG - chr4_2:61496487-61496506 None:intergenic 35.0%
AGGAATTGAGAAAATCAGAC+AGG + chr4_2:61496488-61496507 Msa0612960:CDS 35.0%
ATGTTATCATTCTGTCTGTG+TGG + chr4_2:61496535-61496554 Msa0612960:intron 35.0%
GGAATATTACTTTCCTCTAG+TGG - chr4_2:61496565-61496584 None:intergenic 35.0%
! ACTTCTACACTCTTCTGAAA+TGG + chr4_2:61496651-61496670 Msa0612960:intron 35.0%
! TATCTTACATTTTCTCACGC+AGG + chr4_2:61497052-61497071 Msa0612960:intron 35.0%
! ATATCCATCTTCCCCATTTT+TGG - chr4_2:61497137-61497156 None:intergenic 35.0%
GAAACAAAGTCACTTGAGAA+AGG - chr4_2:61497260-61497279 None:intergenic 35.0%
! TCTCAAGTGACTTTGTTTCT+TGG + chr4_2:61497261-61497280 Msa0612960:intron 35.0%
TGTATTTGACAAAGGAGACA+TGG - chr4_2:61497770-61497789 None:intergenic 35.0%
ACATTGTTCTAACACCTTCA+TGG + chr4_2:61497826-61497845 Msa0612960:intron 35.0%
CATTGTTCTAACACCTTCAT+GGG + chr4_2:61497827-61497846 Msa0612960:intron 35.0%
CACAGCAAGCAATATAACAA+TGG - chr4_2:61497887-61497906 None:intergenic 35.0%
AAGTCAATGAAGTGAAAAGG+GGG - chr4_2:61498322-61498341 None:intergenic 35.0%
GAAGTCAATGAAGTGAAAAG+GGG - chr4_2:61498323-61498342 None:intergenic 35.0%
CCAAAAACATCTCCATAAAG+TGG - chr4_2:61498379-61498398 None:intergenic 35.0%
! CCACTTTATGGAGATGTTTT+TGG + chr4_2:61498376-61498395 Msa0612960:CDS 35.0%
AAGTTCCACTTTGCAATTAG+AGG + chr4_2:61498444-61498463 Msa0612960:CDS 35.0%
AGTTCCACTTTGCAATTAGA+GGG + chr4_2:61498445-61498464 Msa0612960:CDS 35.0%
ATCATAAAGGGAAACTTTGG+AGG - chr4_2:61498492-61498511 None:intergenic 35.0%
ATCTATTCACTCTGAGCAAA+CGG - chr4_2:61498706-61498725 None:intergenic 35.0%
!!! ACGATTGTTGCTTTTGTTGA+AGG + chr4_2:61498982-61499001 Msa0612960:intron 35.0%
TTGTTGAAGGACATTGTACA+CGG + chr4_2:61498995-61499014 Msa0612960:intron 35.0%
! TGGTTCTATTCAAACATCAG+TGG + chr4_2:61499019-61499038 Msa0612960:CDS 35.0%
TATTCAAACATCAGTGGTAC+TGG + chr4_2:61499025-61499044 Msa0612960:CDS 35.0%
ATTCAAACATCAGTGGTACT+GGG + chr4_2:61499026-61499045 Msa0612960:CDS 35.0%
ATTCATTCTCCAGTGAAAAG+AGG + chr4_2:61499078-61499097 Msa0612960:CDS 35.0%
GACATTAATGCCATCATAAC+AGG - chr4_2:61499126-61499145 None:intergenic 35.0%
GTTACTTAGTTTCTGTGATG+AGG + chr4_2:61499248-61499267 Msa0612960:CDS 35.0%
!!! TGTAGAAACACTGTTTTGGT+GGG + chr4_2:61499351-61499370 Msa0612960:intron 35.0%
GTATCATACGTGCAAATGAT+GGG + chr4_2:61499430-61499449 Msa0612960:intron 35.0%
TATTACTCCTCTTCAAGTCT+AGG + chr4_2:61500190-61500209 Msa0612960:intron 35.0%
AAGTTTAAGAACCCATCATG+TGG + chr4_2:61500301-61500320 Msa0612960:intron 35.0%
GACTAAATTAGCCACATGAT+GGG - chr4_2:61500315-61500334 None:intergenic 35.0%
TGACTAAATTAGCCACATGA+TGG - chr4_2:61500316-61500335 None:intergenic 35.0%
AGAAATGAGCGCACAAATAA+AGG - chr4_2:61500513-61500532 None:intergenic 35.0%
TTACGAAGGTCAATAACATC+AGG - chr4_2:61500577-61500596 None:intergenic 35.0%
TGATGTTATTGACCTTCGTA+AGG + chr4_2:61500576-61500595 Msa0612960:CDS 35.0%
GAAAGACTCACTTGATAAAG+AGG - chr4_2:61500625-61500644 None:intergenic 35.0%
TAAGGTCCTTGAAGAAAAAG+AGG + chr4_2:61500715-61500734 Msa0612960:intron 35.0%
! GAGTTTCTTGCTCCTTTTTA+TGG + chr4_2:61500941-61500960 Msa0612960:intron 35.0%
! GTTTCTTGCTCCTTTTTATG+GGG + chr4_2:61500943-61500962 Msa0612960:intron 35.0%
! TTTCTTGCTCCTTTTTATGG+GGG + chr4_2:61500944-61500963 Msa0612960:intron 35.0%
CGTTATCCCACAAGAAAATA+CGG - chr4_2:61500987-61501006 None:intergenic 35.0%
!! TTCCAGGTTGATTTGCTTAA+AGG + chr4_2:61501018-61501037 Msa0612960:intron 35.0%
ACATCTGCTAAAACTATTCC+AGG + chr4_2:61501183-61501202 Msa0612960:intron 35.0%
ATTCCAGGTATAATGAAGCA+AGG + chr4_2:61501198-61501217 Msa0612960:intron 35.0%
TTCCAGGTATAATGAAGCAA+GGG + chr4_2:61501199-61501218 Msa0612960:intron 35.0%
GTACAGGTCTATATGATTTG+AGG - chr4_2:61501294-61501313 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr4_2:61501435-61501454 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr4_2:61501434-61501453 Msa0612960:intron 35.0%
AAGAGGAAGCAAGAAAAAGA+TGG + chr4_2:61501590-61501609 Msa0612960:CDS 35.0%
ATCCGTTAATGAGACATACT+TGG + chr4_2:61501901-61501920 Msa0612960:three_prime_UTR 35.0%
! AAGACATATGCATCCCTTTT+GGG - chr4_2:61501979-61501998 None:intergenic 35.0%
GCGCGTGTAAGAAAGTTATT+GGG - chr4_2:61493958-61493977 None:intergenic 40.0%
ATTTGGTCGGATTCACGAAT+GGG - chr4_2:61494038-61494057 None:intergenic 40.0%
GAAACGCTAGTGCATCAAAA+CGG + chr4_2:61494076-61494095 Msa0612960:CDS 40.0%
!!! CCGAGATTTTTTTACAGTGG+CGG - chr4_2:61494134-61494153 None:intergenic 40.0%
CCGCCACTGTAAAAAAATCT+CGG + chr4_2:61494131-61494150 Msa0612960:CDS 40.0%
CGCCACTGTAAAAAAATCTC+GGG + chr4_2:61494132-61494151 Msa0612960:CDS 40.0%
!!! CTCCCGAGATTTTTTTACAG+TGG - chr4_2:61494137-61494156 None:intergenic 40.0%
GAAAATCACCAAAGCCTCTA+AGG + chr4_2:61494189-61494208 Msa0612960:CDS 40.0%
ACAACAACACCAACAACAAC+AGG + chr4_2:61494270-61494289 Msa0612960:CDS 40.0%
AGATGAGAACCTGTTGTTGT+TGG - chr4_2:61494282-61494301 None:intergenic 40.0%
AGTTGTATCTAATGGCGTAG+TGG - chr4_2:61494801-61494820 None:intergenic 40.0%
GGCCAAGGTTAATAGATCAA+AGG - chr4_2:61494969-61494988 None:intergenic 40.0%
GAAATCAAAGAGAATGGCCA+AGG - chr4_2:61494984-61495003 None:intergenic 40.0%
GTCGCAGAAATCAAAGAGAA+TGG - chr4_2:61494990-61495009 None:intergenic 40.0%
TTCAGCAGATCCAAAGTTGT+TGG + chr4_2:61495835-61495854 Msa0612960:CDS 40.0%
TGGGTACAGGTACAGTATTT+CGG - chr4_2:61495877-61495896 None:intergenic 40.0%
GTAAACATGTTCGAGGGTTA+TGG + chr4_2:61495969-61495988 Msa0612960:intron 40.0%
TGGGATGTATGGATAGAGTT+AGG + chr4_2:61496006-61496025 Msa0612960:intron 40.0%
TGTATGTATGTGGTACTTGC+AGG + chr4_2:61496058-61496077 Msa0612960:intron 40.0%
GTATGTATGTGGTACTTGCA+GGG + chr4_2:61496059-61496078 Msa0612960:intron 40.0%
TATGTATGTGGTACTTGCAG+GGG + chr4_2:61496060-61496079 Msa0612960:intron 40.0%
AATGATTCAAGGCTACTCAG+TGG - chr4_2:61496128-61496147 None:intergenic 40.0%
! TTGATTTTGCAGGGGAAAAG+AGG + chr4_2:61496420-61496439 Msa0612960:intron 40.0%
TATTACTTTCCTCTAGTGGG+TGG - chr4_2:61496561-61496580 None:intergenic 40.0%
AGTAATATTCCAAGAGAGCG+TGG + chr4_2:61496574-61496593 Msa0612960:intron 40.0%
!! CTCTTCTGAAATGGCTTTCA+TGG + chr4_2:61496660-61496679 Msa0612960:intron 40.0%
GCAGGCTTATATTGAGAAAG+AGG + chr4_2:61497070-61497089 Msa0612960:intron 40.0%
GAACGCATGCAACCAAAAAT+GGG + chr4_2:61497122-61497141 Msa0612960:CDS 40.0%
AACGCATGCAACCAAAAATG+GGG + chr4_2:61497123-61497142 Msa0612960:CDS 40.0%
! GACTTTGTTTCTTGGTTGTC+AGG + chr4_2:61497269-61497288 Msa0612960:intron 40.0%
CATACATACATGCAGCATAG+TGG + chr4_2:61497421-61497440 Msa0612960:intron 40.0%
!! ATGGAAGTATCCACTACTCA+AGG - chr4_2:61497751-61497770 None:intergenic 40.0%
!! TGTTATATTGCTTGCTGTGC+AGG + chr4_2:61497888-61497907 Msa0612960:intron 40.0%
AACTCATGTGATAACATGCC+AGG - chr4_2:61497934-61497953 None:intergenic 40.0%
! CATGAGTTGAAAGAAGCTCT+TGG + chr4_2:61497946-61497965 Msa0612960:CDS 40.0%
ACCTGCATGTTAATAAGCCA+CGG - chr4_2:61497994-61498013 None:intergenic 40.0%
TGCAGGTAAAATCAGTGTCT+TGG + chr4_2:61498007-61498026 Msa0612960:intron 40.0%
! ATCTTCAGAGAAGGGTATGA+TGG - chr4_2:61498110-61498129 None:intergenic 40.0%
ATAACCAAAACTAGCTCCTG+GGG - chr4_2:61498156-61498175 None:intergenic 40.0%
GATAACCAAAACTAGCTCCT+GGG - chr4_2:61498157-61498176 None:intergenic 40.0%
TGATAACCAAAACTAGCTCC+TGG - chr4_2:61498158-61498177 None:intergenic 40.0%
!!! GCTAGTTTTGGTTATCATCC+TGG + chr4_2:61498161-61498180 Msa0612960:CDS 40.0%
!!! AGTTTTGGTTATCATCCTGG+TGG + chr4_2:61498164-61498183 Msa0612960:CDS 40.0%
AAATGTACCTCATCAACAGG+AGG - chr4_2:61498200-61498219 None:intergenic 40.0%
AATTAGGCTGATCTTGCTGA+TGG - chr4_2:61498405-61498424 None:intergenic 40.0%
GCAAGATCAGCCTAATTATG+AGG + chr4_2:61498408-61498427 Msa0612960:CDS 40.0%
GATCAGCCTAATTATGAGGT+TGG + chr4_2:61498412-61498431 Msa0612960:CDS 40.0%
GTTCCACTTTGCAATTAGAG+GGG + chr4_2:61498446-61498465 Msa0612960:CDS 40.0%
TTACCCCTCTAATTGCAAAG+TGG - chr4_2:61498452-61498471 None:intergenic 40.0%
! ACTAGGTTATGTTTGGCCTT+TGG + chr4_2:61498555-61498574 Msa0612960:intron 40.0%
GAGCCATCACAATTGTGATT+CGG + chr4_2:61498883-61498902 Msa0612960:intron 40.0%
ACACCGAATCACAATTGTGA+TGG - chr4_2:61498889-61498908 None:intergenic 40.0%
ACTGGAGAATGAATCAAGTG+AGG - chr4_2:61499072-61499091 None:intergenic 40.0%
TGCCATCATAACAGGCTTTA+GGG - chr4_2:61499118-61499137 None:intergenic 40.0%
ATGCCATCATAACAGGCTTT+AGG - chr4_2:61499119-61499138 None:intergenic 40.0%
GATTTCCAGCAATATCCCAA+TGG - chr4_2:61499176-61499195 None:intergenic 40.0%
!! CAATGTGTTGCTTGGAGTTA+CGG + chr4_2:61499303-61499322 Msa0612960:CDS 40.0%
! CAGTGTTTCTACAGGTGTTA+TGG - chr4_2:61499344-61499363 None:intergenic 40.0%
! CACCTGTAGAAACACTGTTT+TGG + chr4_2:61499347-61499366 Msa0612960:intron 40.0%
! CACCAAAACAGTGTTTCTAC+AGG - chr4_2:61499352-61499371 None:intergenic 40.0%
!! CTGTAGAAACACTGTTTTGG+TGG + chr4_2:61499350-61499369 Msa0612960:intron 40.0%
! CAGTGTTTCTACAGGAGTTA+TGG - chr4_2:61499393-61499412 None:intergenic 40.0%
! CTCCTGTAGAAACACTGTTT+TGG + chr4_2:61499396-61499415 Msa0612960:intron 40.0%
!! CTGTAGAAACACTGTTTTGG+CGG + chr4_2:61499350-61499369 Msa0612960:intron 40.0%
!!! TGTAGAAACACTGTTTTGGC+GGG + chr4_2:61499400-61499419 Msa0612960:intron 40.0%
GGTATCATACGTGCAAATGA+TGG + chr4_2:61499429-61499448 Msa0612960:intron 40.0%
!! CATAATCTCACCTGTTTTGG+TGG + chr4_2:61499478-61499497 Msa0612960:intron 40.0%
TCAAGTGAATGTCAGTTTGG+AGG - chr4_2:61499585-61499604 None:intergenic 40.0%
CAGCAGTTTCAAAACAGAAG+AGG - chr4_2:61499668-61499687 None:intergenic 40.0%
!! TGGCACTGAATGGGTATTTT+TGG + chr4_2:61499816-61499835 Msa0612960:intron 40.0%
!! GGCACTGAATGGGTATTTTT+GGG + chr4_2:61499817-61499836 Msa0612960:intron 40.0%
!! GCACTGAATGGGTATTTTTG+GGG + chr4_2:61499818-61499837 Msa0612960:intron 40.0%
!!! ATGGGTATTTTTGGGGAGTT+TGG + chr4_2:61499825-61499844 Msa0612960:intron 40.0%
!!! TGGGTATTTTTGGGGAGTTT+GGG + chr4_2:61499826-61499845 Msa0612960:intron 40.0%
! AGTCTGGTAACGAGAGTTAT+TGG - chr4_2:61499908-61499927 None:intergenic 40.0%
CATACATGTTCTCACAATGC+AGG + chr4_2:61500010-61500029 Msa0612960:intron 40.0%
AACAAAACATTGGGGTGACT+TGG + chr4_2:61500049-61500068 Msa0612960:CDS 40.0%
AAAGGAACCTAGACTTGAAG+AGG - chr4_2:61500200-61500219 None:intergenic 40.0%
TAACCACGTGAATGTTTCAC+TGG + chr4_2:61500397-61500416 Msa0612960:intron 40.0%
ACTTGATAAAGAGGCCTTTC+AGG - chr4_2:61500616-61500635 None:intergenic 40.0%
! AAAGAGGAAAAACTTGCTCC+TGG + chr4_2:61500731-61500750 Msa0612960:CDS 40.0%
TCCATTTCTCTCCAGTTATG+TGG + chr4_2:61500869-61500888 Msa0612960:intron 40.0%
ACCACATAACTGGAGAGAAA+TGG - chr4_2:61500873-61500892 None:intergenic 40.0%
TTTCTCTCCAGTTATGTGGT+TGG + chr4_2:61500873-61500892 Msa0612960:intron 40.0%
! TTCTTGCTCCTTTTTATGGG+GGG + chr4_2:61500945-61500964 Msa0612960:intron 40.0%
! CTTTTTATGGGGGGTAAAGA+GGG + chr4_2:61500954-61500973 Msa0612960:intron 40.0%
! TTTTTATGGGGGGTAAAGAG+GGG + chr4_2:61500955-61500974 Msa0612960:intron 40.0%
! CATGTGCCGTATTTTCTTGT+GGG + chr4_2:61500978-61500997 Msa0612960:intron 40.0%
GACCTTTAAGCAAATCAACC+TGG - chr4_2:61501023-61501042 None:intergenic 40.0%
AGGTCAAAAGACAGATAGAG+TGG + chr4_2:61501038-61501057 Msa0612960:CDS 40.0%
! TGGAGAACGTTTTACATACC+AGG + chr4_2:61501094-61501113 Msa0612960:CDS 40.0%
CAAGGGAGGAAGAGAAATTA+CGG + chr4_2:61501216-61501235 Msa0612960:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr4_2:61501384-61501403 Msa0612960:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr4_2:61501428-61501447 Msa0612960:CDS 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr4_2:61501429-61501448 Msa0612960:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + chr4_2:61501460-61501479 Msa0612960:intron 40.0%
TCTTCTCATTCTGCATCAGA+TGG - chr4_2:61501565-61501584 None:intergenic 40.0%
TGATGCAGAATGAGAAGAAG+AGG + chr4_2:61501567-61501586 Msa0612960:intron 40.0%
AGAATGAGAAGAAGAGGAAG+AGG + chr4_2:61501573-61501592 Msa0612960:intron 40.0%
!!! TCGGTTCCTCTTTATTTTGC+AGG + chr4_2:61501650-61501669 Msa0612960:three_prime_UTR 40.0%
CTACTCATGTGATGATACGA+TGG + chr4_2:61501822-61501841 Msa0612960:three_prime_UTR 40.0%
CTGACACGTTCTTCTGTATA+AGG - chr4_2:61501851-61501870 None:intergenic 40.0%
! CAAGACATATGCATCCCTTT+TGG - chr4_2:61501980-61501999 None:intergenic 40.0%
AAAGGGATGCATATGTCTTG+TGG + chr4_2:61501980-61501999 Msa0612960:three_prime_UTR 40.0%
GGCGCGTGTAAGAAAGTTAT+TGG - chr4_2:61493959-61493978 None:intergenic 45.0%
TCCTATAACTCTCCATCGCA+CGG + chr4_2:61493991-61494010 Msa0612960:five_prime_UTR 45.0%
ACGAATGGGATTAACCGAGA+GGG - chr4_2:61494024-61494043 None:intergenic 45.0%
! GATTTGGTCGGATTCACGAA+TGG - chr4_2:61494039-61494058 None:intergenic 45.0%
TTGATGCACTAGCGTTTCTG+CGG - chr4_2:61494074-61494093 None:intergenic 45.0%
!! CAAAACGGTGTCGTTTCCAA+CGG + chr4_2:61494091-61494110 Msa0612960:CDS 45.0%
! TTTTCTTTTGCTTCCGGCGA+CGG - chr4_2:61494174-61494193 None:intergenic 45.0%
! GTTTGGTTCCTTAGAGGCTT+TGG - chr4_2:61494200-61494219 None:intergenic 45.0%
! GTTAGCGTTTGGTTCCTTAG+AGG - chr4_2:61494206-61494225 None:intergenic 45.0%
!! GTTTGTGCATTTTGGCGTAG+TGG + chr4_2:61494571-61494590 Msa0612960:intron 45.0%
!! GAAAATTTTGAGGGGTGGCA+TGG + chr4_2:61494892-61494911 Msa0612960:intron 45.0%
TCAGGGGCTAACATTCTCTA+AGG - chr4_2:61494928-61494947 None:intergenic 45.0%
AGCAGAGCTATATGAAGGCT+TGG + chr4_2:61495244-61495263 Msa0612960:CDS 45.0%
GCTATATGAAGGCTTGGATG+AGG + chr4_2:61495250-61495269 Msa0612960:CDS 45.0%
!! CAGCGAGGTTATTGATTCAG+AGG + chr4_2:61495304-61495323 Msa0612960:CDS 45.0%
TTTGTGTTCAGCTTCAACGC+AGG + chr4_2:61495615-61495634 Msa0612960:intron 45.0%
AGCTGAAACAGATTAGCGCA+AGG + chr4_2:61495651-61495670 Msa0612960:CDS 45.0%
ATACCAACCTCGACAACATC+AGG - chr4_2:61495677-61495696 None:intergenic 45.0%
GAAATACTGTACCTGTACCC+AGG + chr4_2:61495876-61495895 Msa0612960:CDS 45.0%
ATCACCAAGCCTGGAATTGT+AGG + chr4_2:61496096-61496115 Msa0612960:intron 45.0%
AACACCTACAATTCCAGGCT+TGG - chr4_2:61496103-61496122 None:intergenic 45.0%
TGGCAAACACCTACAATTCC+AGG - chr4_2:61496108-61496127 None:intergenic 45.0%
CTTTCACTGTGCTTAATGCC+CGG + chr4_2:61496294-61496313 Msa0612960:intron 45.0%
TTTCACTGTGCTTAATGCCC+GGG + chr4_2:61496295-61496314 Msa0612960:intron 45.0%
GACTATGAGGTTATGTGGTC+AGG - chr4_2:61496360-61496379 None:intergenic 45.0%
CGCATGACTATGAGGTTATG+TGG - chr4_2:61496365-61496384 None:intergenic 45.0%
TTTGTGTGCGCATGACTATG+AGG - chr4_2:61496373-61496392 None:intergenic 45.0%
CCTGTGGCAGCAATAAAATC+AGG - chr4_2:61496471-61496490 None:intergenic 45.0%
! CCTGATTTTATTGCTGCCAC+AGG + chr4_2:61496468-61496487 Msa0612960:CDS 45.0%
TTACACAAACCACGCTCTCT+TGG - chr4_2:61496586-61496605 None:intergenic 45.0%
GGAACGCATGCAACCAAAAA+TGG + chr4_2:61497121-61497140 Msa0612960:CDS 45.0%
GCAACCAAAAATGGGGAAGA+TGG + chr4_2:61497130-61497149 Msa0612960:CDS 45.0%
!! ATGACAGCTTTGGCTTTGTC+TGG - chr4_2:61497320-61497339 None:intergenic 45.0%
AAGCCAAAGCTGTCATCTCT+TGG + chr4_2:61497324-61497343 Msa0612960:CDS 45.0%
AGCCAAAGCTGTCATCTCTT+GGG + chr4_2:61497325-61497344 Msa0612960:CDS 45.0%
CTTGGGGACTTGTATCATGA+AGG + chr4_2:61497342-61497361 Msa0612960:CDS 45.0%
TTTCTCACCTCCTTGAGTAG+TGG + chr4_2:61497738-61497757 Msa0612960:intron 45.0%
! GAAGTATCCACTACTCAAGG+AGG - chr4_2:61497748-61497767 None:intergenic 45.0%
CCAATGGACAAATCCCATGA+AGG - chr4_2:61497843-61497862 None:intergenic 45.0%
CCTTCATGGGATTTGTCCAT+TGG + chr4_2:61497840-61497859 Msa0612960:intron 45.0%
TTGCTGTGCAGGTAAAGTTG+AGG + chr4_2:61497899-61497918 Msa0612960:intron 45.0%
TGCTGTGCAGGTAAAGTTGA+GGG + chr4_2:61497900-61497919 Msa0612960:intron 45.0%
AAGTTGAGGGAGATGAAACC+TGG + chr4_2:61497913-61497932 Msa0612960:CDS 45.0%
ATGTTAATAAGCCACGGAGG+AGG - chr4_2:61497988-61498007 None:intergenic 45.0%
TGCATGTTAATAAGCCACGG+AGG - chr4_2:61497991-61498010 None:intergenic 45.0%
TCCGTGGCTTATTAACATGC+AGG + chr4_2:61497990-61498009 Msa0612960:CDS 45.0%
! GAGGACCGTATCTCTGAAAA+AGG - chr4_2:61498085-61498104 None:intergenic 45.0%
! TTCAGAGAAGGGTATGATGG+TGG - chr4_2:61498107-61498126 None:intergenic 45.0%
TAACCAAAACTAGCTCCTGG+GGG - chr4_2:61498155-61498174 None:intergenic 45.0%
TGAAGTGAAAAGGGGGATGA+GGG - chr4_2:61498315-61498334 None:intergenic 45.0%
ATGAAGTGAAAAGGGGGATG+AGG - chr4_2:61498316-61498335 None:intergenic 45.0%
TGTCTGCATCTTGAGCAGTT+CGG + chr4_2:61498349-61498368 Msa0612960:CDS 45.0%
! GGTCGACTCTCAGATATTCT+TGG + chr4_2:61498929-61498948 Msa0612960:intron 45.0%
GTCCCTAAAGCCTGTTATGA+TGG + chr4_2:61499113-61499132 Msa0612960:intron 45.0%
ATTAATGTCCCTCCCGAAGT+TGG + chr4_2:61499137-61499156 Msa0612960:intron 45.0%
ATCCCAATGGACAGAAGTGA+CGG - chr4_2:61499163-61499182 None:intergenic 45.0%
TCTGTCCATTGGGATATTGC+TGG + chr4_2:61499168-61499187 Msa0612960:intron 45.0%
CTGTGATGAGGGTAAAGATC+AGG + chr4_2:61499260-61499279 Msa0612960:CDS 45.0%
AGATCAGGACAGATCTTCAG+TGG + chr4_2:61499275-61499294 Msa0612960:CDS 45.0%
GTGTTATGGTCTCTCCTGTA+GGG - chr4_2:61499330-61499349 None:intergenic 45.0%
!!! TGTTTTGGTGGGAAGATAGC+AGG + chr4_2:61499362-61499381 Msa0612960:intron 45.0%
! CGCCAAAACAGTGTTTCTAC+AGG - chr4_2:61499401-61499420 None:intergenic 45.0%
! CTTTTAACACCCAAGGCACA+AGG - chr4_2:61499515-61499534 None:intergenic 45.0%
! TCGGGTACTTTTAACACCCA+AGG - chr4_2:61499522-61499541 None:intergenic 45.0%
TTCGTATTCACGACAGAGAG+CGG - chr4_2:61499787-61499806 None:intergenic 45.0%
TCTCTGTCGTGAATACGAAG+AGG + chr4_2:61499788-61499807 Msa0612960:intron 45.0%
TGTCGTGAATACGAAGAGGA+TGG + chr4_2:61499792-61499811 Msa0612960:intron 45.0%
GTCGTGAATACGAAGAGGAT+GGG + chr4_2:61499793-61499812 Msa0612960:intron 45.0%
!! ATTTTTGGGGAGTTTGGGTG+TGG + chr4_2:61499831-61499850 Msa0612960:intron 45.0%
AGAACTCGGAAAACAGAGTC+TGG - chr4_2:61499924-61499943 None:intergenic 45.0%
! GACTCTGTTTTCCGAGTTCT+AGG + chr4_2:61499924-61499943 Msa0612960:intron 45.0%
!! TTTGTTTTCAGCACACCGAC+TGG + chr4_2:61500541-61500560 Msa0612960:intron 45.0%
!! TTGTTTTCAGCACACCGACT+GGG + chr4_2:61500542-61500561 Msa0612960:intron 45.0%
GTAGTTCCAAGCAAAGTTCC+AGG - chr4_2:61500752-61500771 None:intergenic 45.0%
!! TTTTGCCCCTGACTTGTCTT+GGG - chr4_2:61500907-61500926 None:intergenic 45.0%
!! TTTTTGCCCCTGACTTGTCT+TGG - chr4_2:61500908-61500927 None:intergenic 45.0%
AAGACAAGTCAGGGGCAAAA+AGG + chr4_2:61500907-61500926 Msa0612960:CDS 45.0%
AGACAAGTCAGGGGCAAAAA+GGG + chr4_2:61500908-61500927 Msa0612960:CDS 45.0%
CCTCTTTACCCCCCATAAAA+AGG - chr4_2:61500956-61500975 None:intergenic 45.0%
! CCTTTTTATGGGGGGTAAAG+AGG + chr4_2:61500953-61500972 Msa0612960:intron 45.0%
! GCATGTGCCGTATTTTCTTG+TGG + chr4_2:61500977-61500996 Msa0612960:intron 45.0%
CTCCCTTGCTTCATTATACC+TGG - chr4_2:61501204-61501223 None:intergenic 45.0%
CAGGTATAATGAAGCAAGGG+AGG + chr4_2:61501202-61501221 Msa0612960:intron 45.0%
TTTCAGTGACATGGTTGCTG+AGG + chr4_2:61501253-61501272 Msa0612960:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr4_2:61501390-61501409 Msa0612960:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr4_2:61501391-61501410 Msa0612960:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr4_2:61501424-61501443 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr4_2:61501456-61501475 Msa0612960:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr4_2:61501459-61501478 Msa0612960:intron 45.0%
TTGCAGGTAAATGGAAGACG+TGG + chr4_2:61501666-61501685 Msa0612960:three_prime_UTR 45.0%
! TCATTTTCCATGAGCAGCAG+AGG + chr4_2:61501712-61501731 Msa0612960:three_prime_UTR 45.0%
!! ATAATAAATTGAAAATAAAA+TGG - chr4_2:61497535-61497554 None:intergenic 5.0%
!!! TATTTGATTTTTATTTATTT+TGG - chr4_2:61498771-61498790 None:intergenic 5.0%
!! AAAATAATTAAGAAAAAAAA+AGG - chr4_2:61500218-61500237 None:intergenic 5.0%
!!! TATAATTTTTTTATAGTATT+TGG + chr4_2:61500792-61500811 Msa0612960:intron 5.0%
CCTATAACTCTCCATCGCAC+GGG + chr4_2:61493992-61494011 Msa0612960:five_prime_UTR 50.0%
ATGGGATTAACCGAGAGGGT+GGG - chr4_2:61494020-61494039 None:intergenic 50.0%
AATGGGATTAACCGAGAGGG+TGG - chr4_2:61494021-61494040 None:intergenic 50.0%
CACGAATGGGATTAACCGAG+AGG - chr4_2:61494025-61494044 None:intergenic 50.0%
GTCGTTTCCAACGGAGATCT+TGG + chr4_2:61494100-61494119 Msa0612960:CDS 50.0%
! TTTGGAGCCAAGATCTCCGT+TGG - chr4_2:61494110-61494129 None:intergenic 50.0%
TGCTTCAGTATCGTCTTCGG+AGG - chr4_2:61494230-61494249 None:intergenic 50.0%
! GGGGCTAACATTCTCTAAGG+AGG - chr4_2:61494925-61494944 None:intergenic 50.0%
! GGCAGACTCTGATTCTGAAG+AGG + chr4_2:61495457-61495476 Msa0612960:CDS 50.0%
! CTCTTTTGACACCAGTGCCT+GGG - chr4_2:61495896-61495915 None:intergenic 50.0%
! TCTCTTTTGACACCAGTGCC+TGG - chr4_2:61495897-61495916 None:intergenic 50.0%
CGGGCATTAAGCACAGTGAA+AGG - chr4_2:61496296-61496315 None:intergenic 50.0%
AGGCCAATTGGAATTCAGCC+CGG - chr4_2:61496316-61496335 None:intergenic 50.0%
GCCAAAGCTGTCATCTCTTG+GGG + chr4_2:61497326-61497345 Msa0612960:CDS 50.0%
TCCCCAAGAGATGACAGCTT+TGG - chr4_2:61497330-61497349 None:intergenic 50.0%
AGAAGCTCTTGGTATGCCTG+AGG + chr4_2:61497957-61497976 Msa0612960:CDS 50.0%
GAAGCTCTTGGTATGCCTGA+GGG + chr4_2:61497958-61497977 Msa0612960:CDS 50.0%
!! AGAGAAGGGTATGATGGTGG+AGG - chr4_2:61498104-61498123 None:intergenic 50.0%
! TACCCTTCTCTGAAGATCCC+CGG + chr4_2:61498113-61498132 Msa0612960:CDS 50.0%
AAACTAGCTCCTGGGGGAAT+GGG - chr4_2:61498149-61498168 None:intergenic 50.0%
AAAACTAGCTCCTGGGGGAA+TGG - chr4_2:61498150-61498169 None:intergenic 50.0%
!! ATTCCCCCAGGAGCTAGTTT+TGG + chr4_2:61498149-61498168 Msa0612960:CDS 50.0%
TTGGTTATCATCCTGGTGGC+TGG + chr4_2:61498168-61498187 Msa0612960:CDS 50.0%
TGGTTATCATCCTGGTGGCT+GGG + chr4_2:61498169-61498188 Msa0612960:CDS 50.0%
AAGTGAAAAGGGGGATGAGG+GGG - chr4_2:61498313-61498332 None:intergenic 50.0%
GAAGTGAAAAGGGGGATGAG+GGG - chr4_2:61498314-61498333 None:intergenic 50.0%
GTCTGCATCTTGAGCAGTTC+GGG + chr4_2:61498350-61498369 Msa0612960:CDS 50.0%
TATCTGAGAGTCGACCGCAT+CGG - chr4_2:61498925-61498944 None:intergenic 50.0%
TGAAGGACATTGTACACGGC+TGG + chr4_2:61498999-61499018 Msa0612960:intron 50.0%
ACAGAAGTGACGGCCAACTT+CGG - chr4_2:61499153-61499172 None:intergenic 50.0%
! TGGCACTGCAATGTGTTGCT+TGG + chr4_2:61499295-61499314 Msa0612960:CDS 50.0%
! GGTGTTATGGTCTCTCCTGT+AGG - chr4_2:61499331-61499350 None:intergenic 50.0%
!!! CACTGTTTTGGCGGGAAGAT+AGG + chr4_2:61499408-61499427 Msa0612960:intron 50.0%
! AATGATGGGAAGTGAGACCC+AGG + chr4_2:61499444-61499463 Msa0612960:intron 50.0%
!! CAGAGAGCGGGGTATTGTTT+CGG - chr4_2:61499774-61499793 None:intergenic 50.0%
TCGTATTCACGACAGAGAGC+GGG - chr4_2:61499786-61499805 None:intergenic 50.0%
GTGAATACGAAGAGGATGGG+TGG + chr4_2:61499796-61499815 Msa0612960:intron 50.0%
AAGCAGACTCCTTTGCCAAG+TGG - chr4_2:61499863-61499882 None:intergenic 50.0%
TCTCACAATGCAGGAAGAGC+CGG + chr4_2:61500019-61500038 Msa0612960:intron 50.0%
! ACATTGGGGTGACTTGGAAG+AGG + chr4_2:61500055-61500074 Msa0612960:CDS 50.0%
! TGACTTGGAAGAGGAGGAAG+AGG + chr4_2:61500064-61500083 Msa0612960:CDS 50.0%
GGAGGAAGAAGAGGAAGAAG+AGG + chr4_2:61500088-61500107 Msa0612960:CDS 50.0%
GGAAGAAGAGGAAGAAGAGG+AGG + chr4_2:61500091-61500110 Msa0612960:CDS 50.0%
AGAGGAAGAAGAGGAGGAAG+AGG + chr4_2:61500097-61500116 Msa0612960:CDS 50.0%
GGAAGAGGAAGAAGACATCG+AGG + chr4_2:61500112-61500131 Msa0612960:CDS 50.0%
AGAGGAAGAAGACATCGAGG+AGG + chr4_2:61500115-61500134 Msa0612960:CDS 50.0%
GGACCAGTGAAACATTCACG+TGG - chr4_2:61500403-61500422 None:intergenic 50.0%
!! TGTTTTCAGCACACCGACTG+GGG + chr4_2:61500543-61500562 Msa0612960:intron 50.0%
TTGACCTTCGTAAGGAGCAG+AGG + chr4_2:61500584-61500603 Msa0612960:CDS 50.0%
AGCAGAGGAAGGAACCTGAA+AGG + chr4_2:61500599-61500618 Msa0612960:CDS 50.0%
CTTGCTCCTGGAACTTTGCT+TGG + chr4_2:61500743-61500762 Msa0612960:CDS 50.0%
CTCCAGTTATGTGGTTGGCA+CGG + chr4_2:61500878-61500897 Msa0612960:intron 50.0%
TCCAGTTATGTGGTTGGCAC+GGG + chr4_2:61500879-61500898 Msa0612960:intron 50.0%
!! GGATGTCACTTTACTGCCAG+AGG + chr4_2:61501059-61501078 Msa0612960:CDS 50.0%
CACTTTACTGCCAGAGGAGT+TGG + chr4_2:61501065-61501084 Msa0612960:CDS 50.0%
TCCATGACATCCAACTCCTC+TGG - chr4_2:61501078-61501097 None:intergenic 50.0%
GAAATTACGGAGTCAGCGTG+AGG + chr4_2:61501229-61501248 Msa0612960:CDS 50.0%
GCGTGAGGATTTCAGTGACA+TGG + chr4_2:61501244-61501263 Msa0612960:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_2:61501368-61501387 None:intergenic 50.0%
TTCCATGAGCAGCAGAGGAT+TGG + chr4_2:61501717-61501736 Msa0612960:three_prime_UTR 50.0%
CCCGTGCGATGGAGAGTTAT+AGG - chr4_2:61493995-61494014 None:intergenic 55.0%
! CCATCGTTGCGGGATTTGGT+CGG - chr4_2:61494051-61494070 None:intergenic 55.0%
!! TCTTCGGAGGCGTTAGCGTT+TGG - chr4_2:61494217-61494236 None:intergenic 55.0%
TCGCTACCGTTTACCTCACG+TGG + chr4_2:61494599-61494618 Msa0612960:intron 55.0%
CGCTACCGTTTACCTCACGT+GGG + chr4_2:61494600-61494619 Msa0612960:intron 55.0%
TACCGTTTACCTCACGTGGG+CGG + chr4_2:61494603-61494622 Msa0612960:intron 55.0%
GGATCAAACTCGCCCACATG+AGG - chr4_2:61494670-61494689 None:intergenic 55.0%
AGGCCTGATGTTGTCGAGGT+TGG + chr4_2:61495671-61495690 Msa0612960:intron 55.0%
TACTTGCAGGGGAGCAGTTG+TGG + chr4_2:61496071-61496090 Msa0612960:intron 55.0%
GTTGTGGCAATCACCAAGCC+TGG + chr4_2:61496087-61496106 Msa0612960:intron 55.0%
TGCCCGGGCTGAATTCCAAT+TGG + chr4_2:61496310-61496329 Msa0612960:intron 55.0%
GGCCAATTGGAATTCAGCCC+GGG - chr4_2:61496315-61496334 None:intergenic 55.0%
AGCCGGGGATCTTCAGAGAA+GGG - chr4_2:61498118-61498137 None:intergenic 55.0%
AAGCCGGGGATCTTCAGAGA+AGG - chr4_2:61498119-61498138 None:intergenic 55.0%
!! GAATGGGAGCATTCAAGCCG+GGG - chr4_2:61498133-61498152 None:intergenic 55.0%
!! GGAATGGGAGCATTCAAGCC+GGG - chr4_2:61498134-61498153 None:intergenic 55.0%
!! GGGAATGGGAGCATTCAAGC+CGG - chr4_2:61498135-61498154 None:intergenic 55.0%
TTGAATGCTCCCATTCCCCC+AGG + chr4_2:61498137-61498156 Msa0612960:CDS 55.0%
GGTTATCATCCTGGTGGCTG+GGG + chr4_2:61498170-61498189 Msa0612960:CDS 55.0%
CAGTTCGGGCGTCCACTTTA+TGG + chr4_2:61498364-61498383 Msa0612960:CDS 55.0%
CAGAAGTGACGGCCAACTTC+GGG - chr4_2:61499152-61499171 None:intergenic 55.0%
TGGCCGTCACTTCTGTCCAT+TGG + chr4_2:61499157-61499176 Msa0612960:intron 55.0%
GGCCGTCACTTCTGTCCATT+GGG + chr4_2:61499158-61499177 Msa0612960:intron 55.0%
! ACCCTGCTACTGTCGACTGT+CGG + chr4_2:61499224-61499243 Msa0612960:CDS 55.0%
TCCGACAGTCGACAGTAGCA+GGG - chr4_2:61499228-61499247 None:intergenic 55.0%
CTTGGAGTTACGGTCCCTAC+AGG + chr4_2:61499313-61499332 Msa0612960:CDS 55.0%
CGTATTCACGACAGAGAGCG+GGG - chr4_2:61499785-61499804 None:intergenic 55.0%
! AGAGGATGGGTGGCACTGAA+TGG + chr4_2:61499806-61499825 Msa0612960:intron 55.0%
! GAGGATGGGTGGCACTGAAT+GGG + chr4_2:61499807-61499826 Msa0612960:intron 55.0%
! TGGCTGTTGCCACTTGGCAA+AGG + chr4_2:61499851-61499870 Msa0612960:intron 55.0%
! TTGGGGTGACTTGGAAGAGG+AGG + chr4_2:61500058-61500077 Msa0612960:CDS 55.0%
CTTGGAAGAGGAGGAAGAGG+AGG + chr4_2:61500067-61500086 Msa0612960:CDS 55.0%
GGAAGAGGAGGAGGAAGAAG+AGG + chr4_2:61500079-61500098 Msa0612960:CDS 55.0%
GGAAGAAGACATCGAGGAGG+AGG + chr4_2:61500118-61500137 Msa0612960:CDS 55.0%
!! GAGGAGGAGGCACTTGAAGA+TGG + chr4_2:61500131-61500150 Msa0612960:CDS 55.0%
CCTTCCTCTGCTCCTTACGA+AGG - chr4_2:61500591-61500610 None:intergenic 55.0%
CCTTCGTAAGGAGCAGAGGA+AGG + chr4_2:61500588-61500607 Msa0612960:CDS 55.0%
GCCAGAGGAGTTGGATGTCA+TGG + chr4_2:61501074-61501093 Msa0612960:CDS 55.0%
AGGGATAACCTTGGCGCAAC+TGG + chr4_2:61501357-61501376 Msa0612960:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_2:61501403-61501422 Msa0612960:intron 55.0%
CTAAAGCTCCCGCATACGCA+AGG - chr4_2:61501499-61501518 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_2:61501504-61501523 Msa0612960:intron 55.0%
AGCCAATCCTCTGCTGCTCA+TGG - chr4_2:61501722-61501741 None:intergenic 55.0%
CCGACCAAATCCCGCAACGA+TGG + chr4_2:61494048-61494067 Msa0612960:exon 60.0%
GTTTCTGCGGCCATCGTTGC+GGG - chr4_2:61494061-61494080 None:intergenic 60.0%
CGTTTCTGCGGCCATCGTTG+CGG - chr4_2:61494062-61494081 None:intergenic 60.0%
ACCGTTTACCTCACGTGGGC+GGG + chr4_2:61494604-61494623 Msa0612960:intron 60.0%
ACCCGCCCACGTGAGGTAAA+CGG - chr4_2:61494608-61494627 None:intergenic 60.0%
CGCAAGGCCTGATGTTGTCG+AGG + chr4_2:61495667-61495686 Msa0612960:CDS 60.0%
CTGTACCTGTACCCAGGCAC+TGG + chr4_2:61495882-61495901 Msa0612960:CDS 60.0%
TGACACCAGTGCCTGGGTAC+AGG - chr4_2:61495890-61495909 None:intergenic 60.0%
TCTGTGTGGCCACCCACTAG+AGG + chr4_2:61496549-61496568 Msa0612960:intron 60.0%
GGGCAAGCCTCCTGTTGATG+AGG + chr4_2:61498190-61498209 Msa0612960:CDS 60.0%
AGTGACGGCCAACTTCGGGA+GGG - chr4_2:61499148-61499167 None:intergenic 60.0%
AAGTGACGGCCAACTTCGGG+AGG - chr4_2:61499149-61499168 None:intergenic 60.0%
CTCCGACAGTCGACAGTAGC+AGG - chr4_2:61499229-61499248 None:intergenic 60.0%
TGGGTGTGGCTGTTGCCACT+TGG + chr4_2:61499845-61499864 Msa0612960:intron 60.0%
GGAAGAGGAGGAAGAGGAGG+AGG + chr4_2:61500070-61500089 Msa0612960:CDS 60.0%
! TTTCAGCACACCGACTGGGG+TGG + chr4_2:61500546-61500565 Msa0612960:intron 60.0%
TCAGGTGTCTCCACCCCAGT+CGG - chr4_2:61500559-61500578 None:intergenic 60.0%
GCCCGTGCCAACCACATAAC+TGG - chr4_2:61500883-61500902 None:intergenic 60.0%
ACGGGCACCCAAGACAAGTC+AGG + chr4_2:61500897-61500916 Msa0612960:CDS 60.0%
CGGGCACCCAAGACAAGTCA+GGG + chr4_2:61500898-61500917 Msa0612960:CDS 60.0%
GGGCACCCAAGACAAGTCAG+GGG + chr4_2:61500899-61500918 Msa0612960:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_2:61501472-61501491 Msa0612960:intron 60.0%
CATACGCAAGGTCCGGGAAG+GGG - chr4_2:61501487-61501506 None:intergenic 60.0%
GCATACGCAAGGTCCGGGAA+GGG - chr4_2:61501488-61501507 None:intergenic 60.0%
CTTCCCGGACCTTGCGTATG+CGG + chr4_2:61501487-61501506 Msa0612960:intron 60.0%
TTCCCGGACCTTGCGTATGC+GGG + chr4_2:61501488-61501507 Msa0612960:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_2:61501505-61501524 Msa0612960:intron 60.0%
GCGGCCATCGTTGCGGGATT+TGG - chr4_2:61494055-61494074 None:intergenic 65.0%
GGATTGAACCCGCCCACGTG+AGG - chr4_2:61494615-61494634 None:intergenic 65.0%
CACGGAGGAGGAGAACCCTC+AGG - chr4_2:61497976-61497995 None:intergenic 65.0%
CTGAGGGTTCTCCTCCTCCG+TGG + chr4_2:61497974-61497993 Msa0612960:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_2:61501474-61501493 None:intergenic 65.0%
CGCATACGCAAGGTCCGGGA+AGG - chr4_2:61501489-61501508 None:intergenic 65.0%
CTCCCGCATACGCAAGGTCC+GGG - chr4_2:61501493-61501512 None:intergenic 65.0%
GCTCCCGCATACGCAAGGTC+CGG - chr4_2:61501494-61501513 None:intergenic 65.0%
! GAGGGTGGGTTCCCGTGCGA+TGG - chr4_2:61494006-61494025 None:intergenic 70.0%
CGCACGGGAACCCACCCTCT+CGG + chr4_2:61494007-61494026 Msa0612960:five_prime_UTR 70.0%
GCTTCCGGCGACGGCGACGA+CGG - chr4_2:61494165-61494184 None:intergenic 75.0%
GGAGGCTTGCCCCAGCCACC+AGG - chr4_2:61498182-61498201 None:intergenic 75.0%
! GCGACCGTCGTCGCCGTCGC+CGG + chr4_2:61494158-61494177 Msa0612960:CDS 80.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 61493909 61502021 61493909 ID=Msa0612960;Name=Msa0612960
chr4_2 mRNA 61493909 61502021 61493909 ID=Msa0612960-mRNA-1;Parent=Msa0612960;Name=Msa0612960-mRNA-1;_AED=0.21;_eAED=0.21;_QI=158|0.7|0.80|0.85|1|1|21|378|717
chr4_2 exon 61493909 61494291 61493909 ID=Msa0612960-mRNA-1:exon:16771;Parent=Msa0612960-mRNA-1
chr4_2 exon 61495206 61495325 61495206 ID=Msa0612960-mRNA-1:exon:16772;Parent=Msa0612960-mRNA-1
chr4_2 exon 61495407 61495532 61495407 ID=Msa0612960-mRNA-1:exon:16773;Parent=Msa0612960-mRNA-1
chr4_2 exon 61495626 61495688 61495626 ID=Msa0612960-mRNA-1:exon:16774;Parent=Msa0612960-mRNA-1
chr4_2 exon 61495821 61495928 61495821 ID=Msa0612960-mRNA-1:exon:16775;Parent=Msa0612960-mRNA-1
chr4_2 exon 61496432 61496509 61496432 ID=Msa0612960-mRNA-1:exon:16776;Parent=Msa0612960-mRNA-1
chr4_2 exon 61497074 61497166 61497074 ID=Msa0612960-mRNA-1:exon:16777;Parent=Msa0612960-mRNA-1
chr4_2 exon 61497291 61497377 61497291 ID=Msa0612960-mRNA-1:exon:16778;Parent=Msa0612960-mRNA-1
chr4_2 exon 61497910 61498011 61497910 ID=Msa0612960-mRNA-1:exon:16779;Parent=Msa0612960-mRNA-1
chr4_2 exon 61498092 61498211 61498092 ID=Msa0612960-mRNA-1:exon:16780;Parent=Msa0612960-mRNA-1
chr4_2 exon 61498298 61498467 61498298 ID=Msa0612960-mRNA-1:exon:16781;Parent=Msa0612960-mRNA-1
chr4_2 exon 61499004 61499099 61499004 ID=Msa0612960-mRNA-1:exon:16782;Parent=Msa0612960-mRNA-1
chr4_2 exon 61499198 61499351 61499198 ID=Msa0612960-mRNA-1:exon:16783;Parent=Msa0612960-mRNA-1
chr4_2 exon 61500032 61500180 61500032 ID=Msa0612960-mRNA-1:exon:16784;Parent=Msa0612960-mRNA-1
chr4_2 exon 61500552 61500633 61500552 ID=Msa0612960-mRNA-1:exon:16785;Parent=Msa0612960-mRNA-1
chr4_2 exon 61500719 61500777 61500719 ID=Msa0612960-mRNA-1:exon:16786;Parent=Msa0612960-mRNA-1
chr4_2 exon 61500884 61500929 61500884 ID=Msa0612960-mRNA-1:exon:16787;Parent=Msa0612960-mRNA-1
chr4_2 exon 61501024 61501115 61501024 ID=Msa0612960-mRNA-1:exon:16788;Parent=Msa0612960-mRNA-1
chr4_2 exon 61501205 61501274 61501205 ID=Msa0612960-mRNA-1:exon:16789;Parent=Msa0612960-mRNA-1
chr4_2 exon 61501406 61501450 61501406 ID=Msa0612960-mRNA-1:exon:16790;Parent=Msa0612960-mRNA-1
chr4_2 exon 61501575 61502021 61501575 ID=Msa0612960-mRNA-1:exon:16791;Parent=Msa0612960-mRNA-1
chr4_2 five_prime_UTR 61493909 61494066 61493909 ID=Msa0612960-mRNA-1:five_prime_utr;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61494067 61494291 61494067 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61495206 61495325 61495206 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61495407 61495532 61495407 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61495626 61495688 61495626 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61495821 61495928 61495821 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61496432 61496509 61496432 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61497074 61497166 61497074 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61497291 61497377 61497291 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61497910 61498011 61497910 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61498092 61498211 61498092 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61498298 61498467 61498298 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61499004 61499099 61499004 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61499198 61499351 61499198 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61500032 61500180 61500032 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61500552 61500633 61500552 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61500719 61500777 61500719 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61500884 61500929 61500884 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61501024 61501115 61501024 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61501205 61501274 61501205 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61501406 61501450 61501406 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 CDS 61501575 61501643 61501575 ID=Msa0612960-mRNA-1:cds;Parent=Msa0612960-mRNA-1
chr4_2 three_prime_UTR 61501644 61502021 61501644 ID=Msa0612960-mRNA-1:three_prime_utr;Parent=Msa0612960-mRNA-1
Gene Sequence

>Msa0612960

ATGGCCGCAGAAACGCTAGTGCATCAAAACGGTGTCGTTTCCAACGGAGATCTTGGCTCCAAAACCGCCACTGTAAAAAAATCTCGGGAGAGCGACCGTCGTCGCCGTCGCCGGAAGCAAAAGAAAATCACCAAAGCCTCTAAGGAACCAAACGCTAACGCCTCCGAAGACGATACTGAAGCAAAAGAGAATACTGAACAACAACAACAACACCAACAACAACAGGTTGTTGAACAAGTTGAAATTGAGTATGTACCGGAAAAAGCAGAGCTATATGAAGGCTTGGATGAGGAATTTAAGAAAATCTTTGAGAAATTTAGTTTCAGCGAGGTTATTGATTCAGAGGATAATGATAAGAAGGATGAGTCGGCAGAAAATGCAATTACAAAGAAAAAGGCAGACTCTGATTCTGAAGAGGAAGAAGATGATAACGAGCAAAAAGAGAAAGGAGTCTCAAACAAGAAGAAAAAGCTTCAACGCAGGATGAAGATCGCTGAGCTGAAACAGATTAGCGCAAGGCCTGATGTTGTCGAGGTGTGGGATGCTACTTCAGCAGATCCAAAGTTGTTGGTATTCTTGAAGTCTTACCGAAATACTGTACCTGTACCCAGGCACTGGTGTCAAAAGAGAAAATTTCTGCAGGGGAAAAGAGGTATAGAAAAACAACCTTTTCAGCTTCCTGATTTTATTGCTGCCACAGGAATTGAGAAAATCAGACAGGCTTATATTGAGAAAGAGGACAGCAAAAAGTTGAAACAAAAGCAACGGGAACGCATGCAACCAAAAATGGGGAAGATGGATATTGATTATCAGGTTCTTCATGATGCATTCTTTAAATACCAGACAAAGCCAAAGCTGTCATCTCTTGGGGACTTGTATCATGAAGGAAAAGAATTTGAGGTAAAGTTGAGGGAGATGAAACCTGGCATGTTATCACATGAGTTGAAAGAAGCTCTTGGTATGCCTGAGGGTTCTCCTCCTCCGTGGCTTATTAACATGCAGAGATACGGTCCTCCACCATCATACCCTTCTCTGAAGATCCCCGGCTTGAATGCTCCCATTCCCCCAGGAGCTAGTTTTGGTTATCATCCTGGTGGCTGGGGCAAGCCTCCTGTTGATGAGGGGCTTTCAACACCCCCTCATCCCCCTTTTCACTTCATTGACTTCTTTACTTGTCTGCATCTTGAGCAGTTCGGGCGTCCACTTTATGGAGATGTTTTTGGTGTCCATCAGCAAGATCAGCCTAATTATGAGGTTGGTTTACATAAAAGTTCCACTTTGCAATTAGAGGGGACATTGTACACGGCTGGTTCTATTCAAACATCAGTGGTACTGGGATCAAATAAGATTTTTTTTGCCTCACTTGATTCATTCTCCAGTGAAAAGAGCTTTGACAACTATCGTAGTGAATCTCACCCTGCTACTGTCGACTGTCGGAGTTACTTAGTTTCTGTGATGAGGGTAAAGATCAGGACAGATCTTCAGTGGCACTGCAATGTGTTGCTTGGAGTTACGGTCCCTACAGGAGAGACCATAACACCTGAAGAGCCGGTAGATAAAACAAAACATTGGGGTGACTTGGAAGAGGAGGAAGAGGAGGAGGAAGAAGAGGAAGAAGAGGAGGAAGAGGAAGAAGACATCGAGGAGGAGGCACTTGAAGATGGTATTCAATCTGTTGATAGTATGTCAAGCACACCGACTGGGGTGGAGACACCTGATGTTATTGACCTTCGTAAGGAGCAGAGGAAGGAACCTGAAAGGCCTCTTTATCAAGTCCTTGAAGAAAAAGAGGAAAAACTTGCTCCTGGAACTTTGCTTGGAACTACACACACTTATGTGGTTGGCACGGGCACCCAAGACAAGTCAGGGGCAAAAAGGGTTGATTTGCTTAAAGGTCAAAAGACAGATAGAGTGGATGTCACTTTACTGCCAGAGGAGTTGGATGTCATGGAGAACGTTTTACATACCAGGTATAATGAAGCAAGGGAGGAAGAGAAATTACGGAGTCAGCGTGAGGATTTCAGTGACATGGTTGCTGAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAACAGGAATGAGAAGAAGAGGAAGAGGAAGCAAGAAAAAGATGGCAAGTCCAAGAAAAAAGACTTCAAGTTTTAA
Protein sequence

>Msa0612960

MAAETLVHQNGVVSNGDLGSKTATVKKSRESDRRRRRRKQKKITKASKEPNANASEDDTEAKENTEQQQQHQQQQVVEQVEIEYVPEKAELYEGLDEEFKKIFEKFSFSEVIDSEDNDKKDESAENAITKKKADSDSEEEEDDNEQKEKGVSNKKKKLQRRMKIAELKQISARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSSLGDLYHEGKEFEVKLREMKPGMLSHELKEALGMPEGSPPPWLINMQRYGPPPSYPSLKIPGLNAPIPPGASFGYHPGGWGKPPVDEGLSTPPHPPFHFIDFFTCLHLEQFGRPLYGDVFGVHQQDQPNYEVGLHKSSTLQLEGTLYTAGSIQTSVVLGSNKIFFASLDSFSSEKSFDNYRSESHPATVDCRSYLVSVMRVKIRTDLQWHCNVLLGVTVPTGETITPEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEDIEEEALEDGIQSVDSMSSTPTGVETPDVIDLRKEQRKEPERPLYQVLEEKEEKLAPGTLLGTTHTYVVGTGTQDKSGAKRVDLLKGQKTDRVDVTLLPEELDVMENVLHTRYNEAREEEKLRSQREDFSDMVAEVTGSSPGNSLLCKNRNEKKRKRKQEKDGKSKKKDFKF*