AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170570 MtrunA17_Chr7g0225681 84.836 732 58 6 37 725 8 729 0.0 1106
Msa0170570 MtrunA17_Chr8g0373581 78.761 452 35 6 308 725 2 426 0.0 662
Msa0170570 MtrunA17_Chr8g0373591 85.551 263 27 3 37 289 8 269 2.28e-108 330
Msa0170570 MtrunA17_Chr1g0188151 96.739 92 3 0 634 725 1 92 1.87e-57 189
Msa0170570 MtrunA17_Chr1g0188141 85.714 84 11 1 37 120 8 90 1.30e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170570 AT5G41020.1 55.124 283 126 1 440 722 302 583 1.33e-112 353

Find 139 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAAATTCCAGCTCTTC+AGG 0.282279 1_4:-54739504 None:intergenic
AACAAATGATCCACCATATT+GGG 0.286872 1_4:+54739988 Msa0170570:CDS
GAAGATCAAAGCAGCTGTTT+TGG 0.293853 1_4:+54739299 Msa0170570:CDS
ACATTGCTTTCGGACATATA+TGG 0.300898 1_4:-54738097 None:intergenic
CATTGAGCAGGTGGAAGTTC+TGG 0.301208 1_4:+54740031 Msa0170570:CDS
GTCACTATACTCCTTAAGTT+TGG 0.317240 1_4:-54738887 None:intergenic
TTGATCTTCTCATCTTCTTC+GGG 0.322099 1_4:-54739285 None:intergenic
TTTGATCTTCTCATCTTCTT+CGG 0.324153 1_4:-54739286 None:intergenic
GAACAAATGATCCACCATAT+TGG 0.329038 1_4:+54739987 Msa0170570:CDS
GATAAACGCTTTATATGCTT+TGG 0.342448 1_4:+54739887 Msa0170570:CDS
TATATAGATTCTCATGGTTT+GGG 0.357329 1_4:+54739324 Msa0170570:CDS
GTATATAGATTCTCATGGTT+TGG 0.365976 1_4:+54739323 Msa0170570:CDS
TTATGTGTGCCTTCTTCACT+TGG 0.367399 1_4:-54738577 None:intergenic
TCATCATCTTCACATTCATT+TGG 0.373205 1_4:-54738811 None:intergenic
GGAGGCAATTGGTCACAAAT+TGG 0.375244 1_4:+54739764 Msa0170570:CDS
TCTCTATCTTTCAACAGGTT+AGG 0.380269 1_4:-54740068 None:intergenic
ACTCCTAACTCTGCACATAA+TGG 0.384709 1_4:+54739174 Msa0170570:CDS
GTTCCATTATGTGCAGAGTT+AGG 0.391649 1_4:-54739177 None:intergenic
GAGGGCAGTAGCCGACGCTT+TGG 0.393084 1_4:+54739557 Msa0170570:CDS
TGGCTGCATGCTCCCCAATA+TGG 0.395764 1_4:-54740001 None:intergenic
CAGATCAGCTACATTGCTTT+CGG 0.400572 1_4:-54738107 None:intergenic
CTCTATCTTTCAACAGGTTA+GGG 0.404823 1_4:-54740067 None:intergenic
CATTGGTTGCTAGTGGTGAT+TGG 0.407410 1_4:+54739841 Msa0170570:CDS
GGGAGACGAAGGTCTTGATA+TGG 0.410993 1_4:+54739344 Msa0170570:CDS
AGGCCTCTCTATCTTTCAAC+AGG 0.417278 1_4:-54740073 None:intergenic
AGAAGCAATGAAGGTGATAA+TGG 0.417384 1_4:+54738334 Msa0170570:CDS
TTCCAACAGCCTCTAACCTC+GGG 0.421209 1_4:-54739387 None:intergenic
GTTTCATTATGTGCACAGTT+AGG 0.421260 1_4:-54739153 None:intergenic
TAGCCCTCTCGAGCAGATCT+AGG 0.424550 1_4:-54739689 None:intergenic
AAAGGGAGGGGAGGTGTAAG+TGG 0.424706 1_4:+54739478 Msa0170570:CDS
GTTGCGAGATAATATTTGTT+GGG 0.434220 1_4:+54739743 Msa0170570:CDS
AAATTACACCCCGAGGTTAG+AGG 0.442409 1_4:+54739378 Msa0170570:CDS
GTTTCATTACGTGCACAGTT+AGG 0.446203 1_4:-54739021 None:intergenic
AGGGCAGTAGCCGACGCTTT+GGG 0.446431 1_4:+54739558 Msa0170570:CDS
GCTGCATGGAGGAGGTAGAC+TGG 0.446516 1_4:+54739916 Msa0170570:CDS
CTAAACGCAAACAAGTAACT+TGG 0.447239 1_4:+54739202 Msa0170570:CDS
TGCTCATGCTTTGTTAGAAA+GGG 0.448940 1_4:+54739461 Msa0170570:CDS
GTGCTCATGCTTTGTTAGAA+AGG 0.460254 1_4:+54739460 Msa0170570:CDS
AATATTTGTTGGGAGGCAAT+TGG 0.463198 1_4:+54739753 Msa0170570:CDS
TTTCCAACAGCCTCTAACCT+CGG 0.465967 1_4:-54739388 None:intergenic
ACACTGTAATGAGGCCTCTC+AGG 0.470045 1_4:-54739429 None:intergenic
GTCACTGAAGTTAATGATGA+AGG 0.477306 1_4:+54738949 Msa0170570:CDS
TGCTTTGGATGCTTGCTGCA+TGG 0.479442 1_4:+54739902 Msa0170570:CDS
TAGAAGCAATGGAGGTGAAG+AGG 0.481860 1_4:+54738708 Msa0170570:CDS
ACGGCTTATTGCGTGGGAAA+AGG 0.484774 1_4:+54739256 Msa0170570:CDS
AAGAAGCAGAAATTAATTGA+AGG 0.487991 1_4:+54738658 Msa0170570:CDS
TGTTGCGAGATAATATTTGT+TGG 0.489321 1_4:+54739742 Msa0170570:CDS
GTCAGTGAAGTTAATGATCA+AGG 0.490585 1_4:+54739081 Msa0170570:CDS
GGATGCTTGCTGCATGGAGG+AGG 0.492182 1_4:+54739908 Msa0170570:CDS
AAGAAGAAACCAAGTGAAGA+AGG 0.493411 1_4:+54738568 Msa0170570:CDS
AAGTGAAGAAAGTAAACATA+AGG 0.498172 1_4:+54738771 Msa0170570:CDS
TGAAGGTGATAATGGCGAGC+AGG 0.499793 1_4:+54738342 Msa0170570:CDS
GAGTGAGAAAAGCAAACATA+AGG 0.503511 1_4:+54738393 Msa0170570:CDS
TCAGCATCACCTTCATTGCC+AGG 0.508437 1_4:-54739045 None:intergenic
ATAGGTCTGGTGATGTATGC+AGG 0.510035 1_4:+54739955 Msa0170570:CDS
TGTAATGACTTTAGAAGCAA+TGG 0.511180 1_4:+54738697 Msa0170570:CDS
AACAACTTTAGAAGCAATGA+AGG 0.512264 1_4:+54738325 Msa0170570:CDS
TAAGTGGACACCTGAAGAGC+TGG 0.512398 1_4:+54739494 Msa0170570:CDS
AATTGAGGAAGCCAAACTTA+AGG 0.514474 1_4:+54738876 Msa0170570:CDS
AGTGACATTATAAGCAATGA+AGG 0.517478 1_4:+54738904 Msa0170570:CDS
CGGAAGACATAAGCTACAAA+AGG 0.519685 1_4:+54732810 Msa0170570:CDS
TTTGGGTAAAAGTCGAGATC+AGG 0.519802 1_4:+54739575 Msa0170570:CDS
GAAGAAGAAGAAACTAATTG+AGG 0.520193 1_4:+54738861 Msa0170570:CDS
AGCCAAGTCATTCATTGAGC+AGG 0.521908 1_4:+54740019 Msa0170570:CDS
AATCTACTTGAGCATAGGTC+TGG 0.523977 1_4:+54739942 Msa0170570:CDS
CTGCATGGAGGAGGTAGACT+GGG 0.526890 1_4:+54739917 Msa0170570:CDS
AAAAGCAATAAAAGTGAAGA+TGG 0.528970 1_4:+54738139 Msa0170570:CDS
CGAGCAATTAACATCAGCAT+TGG 0.533412 1_4:+54739824 Msa0170570:CDS
AAGAAGCGGAAGCTAGTTGA+AGG 0.534153 1_4:+54738283 Msa0170570:CDS
TTGGAGTATATAGATTCTCA+TGG 0.535104 1_4:+54739318 Msa0170570:CDS
AAGTGAAGAAGGCACACATA+AGG 0.535379 1_4:+54738579 Msa0170570:CDS
ACCCCGAGGTTAGAGGCTGT+TGG 0.535419 1_4:+54739385 Msa0170570:CDS
AAAAGTGAAGATGGCGAGCA+AGG 0.538269 1_4:+54738148 Msa0170570:CDS
CATATATGGATCACCTCCAT+TGG 0.545409 1_4:-54738083 None:intergenic
CATATAAAGCGTTTATCAAG+CGG 0.546556 1_4:-54739881 None:intergenic
AATCACAGGTTTGTTGTCAA+AGG 0.550299 1_4:-54740093 None:intergenic
ACGAGCAACATGGATCTAGT+TGG 0.551620 1_4:+54739535 Msa0170570:CDS
AACTTGGGCTGATGAGGTGG+AGG 0.553676 1_4:+54739218 Msa0170570:CDS
GTTTATCAAGCGGAAGTCAT+CGG 0.557461 1_4:-54739871 None:intergenic
ACAAGTAACTTGGGCTGATG+AGG 0.559174 1_4:+54739212 Msa0170570:CDS
TGTTGTGACGGCTTATTGCG+TGG 0.561335 1_4:+54739249 Msa0170570:CDS
CTTATGTCTTCCGCGTTCAG+TGG 0.566473 1_4:-54732800 None:intergenic
AATGAAACTCCTGGCAATGA+AGG 0.566619 1_4:+54739036 Msa0170570:CDS
TGTGCACGTAATGAAACTCC+TGG 0.570515 1_4:+54739027 Msa0170570:CDS
CGGTTATACACACTGTAATG+AGG 0.572231 1_4:-54739438 None:intergenic
AGAAGCAATGGAGGTGAAGA+GGG 0.572295 1_4:+54738709 Msa0170570:CDS
CATGCTTTGTTAGAAAGGGA+GGG 0.573971 1_4:+54739465 Msa0170570:CDS
AGTAACTTGGGCTGATGAGG+TGG 0.573985 1_4:+54739215 Msa0170570:CDS
CAAAAGAACTGAAGAAGACG+AGG 0.576699 1_4:+54738054 Msa0170570:CDS
TCATGCTTTGTTAGAAAGGG+AGG 0.576855 1_4:+54739464 Msa0170570:CDS
TAGAAACCTCAACAAATCAC+AGG 0.579568 1_4:-54740107 None:intergenic
GAAGGTGATAATGGCGAGCA+GGG 0.580967 1_4:+54738343 Msa0170570:CDS
ATGCTTTGTTAGAAAGGGAG+GGG 0.581640 1_4:+54739466 Msa0170570:CDS
CACCTGCTCAATGAATGACT+TGG 0.584077 1_4:-54740021 None:intergenic
AACAAACCTGTGATTTGTTG+AGG 0.586181 1_4:+54740101 Msa0170570:CDS
AGCAACATGGATCTAGTTGG+AGG 0.586815 1_4:+54739538 Msa0170570:CDS
GCGAGATAATATTTGTTGGG+AGG 0.587211 1_4:+54739746 Msa0170570:CDS
GAGGAGAAGTTATGTTGTGA+CGG 0.589001 1_4:+54739237 Msa0170570:CDS
ACATCAGCATTGGTTGCTAG+TGG 0.590714 1_4:+54739834 Msa0170570:CDS
GAAGACGAGGGTGAAACCAA+TGG 0.594577 1_4:+54738067 Msa0170570:CDS
CAAGCAACAACCACTGAACG+CGG 0.596259 1_4:+54732790 Msa0170570:CDS
AGAAGCAATGATGATGAAGA+TGG 0.598793 1_4:+54738520 Msa0170570:CDS
CTGCATGCTCCCCAATATGG+TGG 0.600862 1_4:-54739998 None:intergenic
TAAACGCAAACAAGTAACTT+GGG 0.603412 1_4:+54739203 Msa0170570:CDS
TGAAGGAAACACACTTGAGG+AGG 0.607482 1_4:+54738300 Msa0170570:CDS
AAACCTAGATCTGCTCGAGA+GGG 0.608007 1_4:+54739686 Msa0170570:CDS
TAAACCTAGATCTGCTCGAG+AGG 0.609475 1_4:+54739685 Msa0170570:CDS
TTGATCATTAACTTCACTGA+CGG 0.613157 1_4:-54739079 None:intergenic
AATTGAAGGAAGCACACTGA+AGG 0.616212 1_4:+54738483 Msa0170570:CDS
GTTCTCATGAGAATTTGCCA+AGG 0.617212 1_4:-54732768 None:intergenic
GGGACAATCTACTTGAGCAT+AGG 0.618965 1_4:+54739937 Msa0170570:CDS
TAACCTGTTGAAAGATAGAG+AGG 0.620502 1_4:+54740070 Msa0170570:CDS
ACAAATGATCCACCATATTG+GGG 0.622830 1_4:+54739989 Msa0170570:CDS
TCTCATGGTTTGGGAGACGA+AGG 0.623440 1_4:+54739333 Msa0170570:CDS
CAAGTCATTCATTGAGCAGG+TGG 0.627450 1_4:+54740022 Msa0170570:CDS
GAAAAGACCTACGAGCAACA+TGG 0.630731 1_4:+54739525 Msa0170570:CDS
TTTCTAACAAAGCATGAGCA+CGG 0.633278 1_4:-54739458 None:intergenic
GTGATGTATGCAGGAAACGA+TGG 0.636494 1_4:+54739964 Msa0170570:CDS
GAGATCAGGTAAAAGATGCA+TGG 0.640257 1_4:+54739589 Msa0170570:CDS
ATCTCCTACATATTCATGAG+TGG 0.641856 1_4:+54732255 None:intergenic
GTTGTGACGGCTTATTGCGT+GGG 0.642851 1_4:+54739250 Msa0170570:CDS
GCAACATGGATCTAGTTGGA+GGG 0.643237 1_4:+54739539 Msa0170570:CDS
TTTGGATGCTTGCTGCATGG+AGG 0.643384 1_4:+54739905 Msa0170570:CDS
AATGAATGTGAAGATGATGA+TGG 0.645642 1_4:+54738814 Msa0170570:CDS
ACTAGATCCATGTTGCTCGT+AGG 0.645688 1_4:-54739532 None:intergenic
TGATGTATGCAGGAAACGAT+GGG 0.648956 1_4:+54739965 Msa0170570:CDS
AATGACTTTAGAAGCAATGG+AGG 0.658645 1_4:+54738700 Msa0170570:CDS
CTTTGTTAGAAAGGGAGGGG+AGG 0.659450 1_4:+54739469 Msa0170570:CDS
GAAGGAAACACACTTGAGGA+GGG 0.660891 1_4:+54738301 Msa0170570:CDS
AAAAGGACATTGGTCCCAAG+AGG 0.666914 1_4:+54739638 Msa0170570:CDS
AAATGTCAAATTACACCCCG+AGG 0.668903 1_4:+54739371 Msa0170570:CDS
AAATGTGAAGCTGACAACCA+AGG 0.682713 1_4:+54738439 Msa0170570:CDS
TGTGAAGATGATGATGGCCA+AGG 0.683186 1_4:+54738820 Msa0170570:CDS
TCCAACAGCCTCTAACCTCG+GGG 0.692890 1_4:-54739386 None:intergenic
AATGATTGTGAAGATGACCA+AGG 0.698674 1_4:+54738622 Msa0170570:CDS
AGTTGAAGGAAACACACTTG+AGG 0.699110 1_4:+54738297 Msa0170570:CDS
GACGAGGGTGAAACCAATGG+AGG 0.722389 1_4:+54738070 Msa0170570:CDS
AAAAGAACTGAAGAAGACGA+GGG 0.735201 1_4:+54738055 Msa0170570:CDS
GAATGTGAAGATGATGACCA+CGG 0.736913 1_4:+54738247 Msa0170570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAATATACTATTTTTTTA+TGG + chr1_4:54732366-54732385 Msa0170570:intron 10.0%
!!! TTTTGATTTTGATTTTTTAT+AGG + chr1_4:54732478-54732497 Msa0170570:intron 10.0%
!!! TTATTTTTATTGAAAGTTTT+GGG + chr1_4:54732604-54732623 Msa0170570:intron 10.0%
!! TAAAAACTAAAAATGATATA+GGG - chr1_4:54732976-54732995 None:intergenic 10.0%
!! TTAAAAACTAAAAATGATAT+AGG - chr1_4:54732977-54732996 None:intergenic 10.0%
!!! TATTTTTATTATTTGTTGAT+AGG + chr1_4:54733890-54733909 Msa0170570:intron 10.0%
!!! TAAAGTTTTAAAATTAAAAG+TGG - chr1_4:54734166-54734185 None:intergenic 10.0%
!! TTTAAAAAAAATTTACTGAT+AGG + chr1_4:54736087-54736106 Msa0170570:intron 10.0%
!!! ATTTTTTTATTAAAAAGTGA+AGG + chr1_4:54736195-54736214 Msa0170570:intron 10.0%
!! TATTATTAAGTTTGAAAATT+TGG + chr1_4:54736442-54736461 Msa0170570:intron 10.0%
!! AATGTTATAAAAATTAATTC+TGG + chr1_4:54736764-54736783 Msa0170570:intron 10.0%
!! ATGTTATAAAAATTAATTCT+GGG + chr1_4:54736765-54736784 Msa0170570:intron 10.0%
!! AGTTAAAAATAATTATATAC+AGG - chr1_4:54737693-54737712 None:intergenic 10.0%
!! TATTATTTATTTAATCATTG+TGG - chr1_4:54737841-54737860 None:intergenic 10.0%
!!! TTAATTTTGCAATAAAAATC+TGG + chr1_4:54732318-54732337 Msa0170570:intron 15.0%
!!! TAATTTTGCAATAAAAATCT+GGG + chr1_4:54732319-54732338 Msa0170570:intron 15.0%
!! CAAAACTTTCAATAAAAATA+AGG - chr1_4:54732605-54732624 None:intergenic 15.0%
!!! CTTATTTTTATTGAAAGTTT+TGG + chr1_4:54732603-54732622 Msa0170570:intron 15.0%
!! TATATTAAATATATTTGCCA+AGG - chr1_4:54732724-54732743 None:intergenic 15.0%
!!! TGAAAGTTTTTTTTTTTGTA+AGG + chr1_4:54733757-54733776 Msa0170570:intron 15.0%
!!! TTTTTTTTGTAAGGAATATT+AGG + chr1_4:54733766-54733785 Msa0170570:intron 15.0%
!! TTAGCATATAATAAATTGTT+CGG - chr1_4:54734287-54734306 None:intergenic 15.0%
!! TGATATTAAAATTGACAAAA+TGG - chr1_4:54735225-54735244 None:intergenic 15.0%
!! GAGAATTATAACAATTAAAT+CGG - chr1_4:54735891-54735910 None:intergenic 15.0%
!! AATAGATACTTGAAATATAA+AGG - chr1_4:54736024-54736043 None:intergenic 15.0%
!! AATAAATTTCAATTCGTAAT+AGG + chr1_4:54736569-54736588 Msa0170570:intron 15.0%
!!! TTTTATATAGTATTCATCTT+AGG + chr1_4:54736738-54736757 Msa0170570:intron 15.0%
!! AACTCTAATAATAAAAAAGA+TGG - chr1_4:54737376-54737395 None:intergenic 15.0%
!! ACTTTATACCAATTAATATT+CGG + chr1_4:54737810-54737829 Msa0170570:intron 15.0%
!!! TTGTTTTGGTATATTTTAAT+CGG - chr1_4:54739617-54739636 None:intergenic 15.0%
!! AAATATACCAAAACAAAAAA+AGG + chr1_4:54739621-54739640 Msa0170570:CDS 15.0%
!! TATAGCATTACTATTAATCT+GGG - chr1_4:54732666-54732685 None:intergenic 20.0%
!! TTGAATAAAAAACCAATTAC+AGG - chr1_4:54732921-54732940 None:intergenic 20.0%
!! ACAAAGAAAAAGAAGATATA+GGG - chr1_4:54733029-54733048 None:intergenic 20.0%
!! AACAAAGAAAAAGAAGATAT+AGG - chr1_4:54733030-54733049 None:intergenic 20.0%
!!! TTCATTGATATTTTGTACAT+AGG + chr1_4:54733143-54733162 Msa0170570:intron 20.0%
!! TTTGTATGAAGTATAATGTT+TGG + chr1_4:54733169-54733188 Msa0170570:intron 20.0%
!! GAATATATCTTATGAGATAT+TGG + chr1_4:54733287-54733306 Msa0170570:intron 20.0%
!!! TAAGAGAGTATTCTAATATT+AGG + chr1_4:54733732-54733751 Msa0170570:intron 20.0%
!!! TTTATCTATGCTTTTAGTTA+TGG - chr1_4:54733817-54733836 None:intergenic 20.0%
!! AGACATTTGCATAATTAAAA+TGG + chr1_4:54734189-54734208 Msa0170570:intron 20.0%
!!! ATCTTATGATGCAATTTTTA+AGG + chr1_4:54734245-54734264 Msa0170570:intron 20.0%
!! GATTTGATATTTAGTTGTAA+TGG + chr1_4:54734411-54734430 Msa0170570:intron 20.0%
!! TTACAAATTAAGATATGAGA+GGG - chr1_4:54734671-54734690 None:intergenic 20.0%
!! ATTACAAATTAAGATATGAG+AGG - chr1_4:54734672-54734691 None:intergenic 20.0%
!!! AAAAAAAACATTTGTTAGCA+TGG - chr1_4:54734730-54734749 None:intergenic 20.0%
!! GTATATACTTAACCAAATAA+TGG + chr1_4:54735054-54735073 Msa0170570:intron 20.0%
!! ATTCTTATTACATATGAGAT+AGG + chr1_4:54735151-54735170 Msa0170570:intron 20.0%
!!! TCACTCATTTTATCAAATTT+AGG + chr1_4:54735321-54735340 Msa0170570:intron 20.0%
!!! AGATTTTAAGTTATCCTTAA+TGG + chr1_4:54735752-54735771 Msa0170570:intron 20.0%
!! ATAACAATGAAAATGTAGTT+GGG - chr1_4:54735935-54735954 None:intergenic 20.0%
!! TATAACAATGAAAATGTAGT+TGG - chr1_4:54735936-54735955 None:intergenic 20.0%
!! GAACTTAGCAATTAAAAAAA+AGG - chr1_4:54736401-54736420 None:intergenic 20.0%
!!! TTGAAAATTTGGATAAGTTT+TGG + chr1_4:54736453-54736472 Msa0170570:intron 20.0%
!! AAATTAATATCCCAAAATGA+TGG - chr1_4:54736642-54736661 None:intergenic 20.0%
!!! ATCATTTTGGGATATTAATT+TGG + chr1_4:54736641-54736660 Msa0170570:intron 20.0%
!! GAATACTATATAAAAACCAA+AGG - chr1_4:54736733-54736752 None:intergenic 20.0%
!!! AAAGTTTTGTAATATTTTCG+AGG + chr1_4:54736901-54736920 Msa0170570:intron 20.0%
!! ATTGTTACTATATATCCTTA+CGG - chr1_4:54737304-54737323 None:intergenic 20.0%
!! AACTTTAAGTATATGATTCA+TGG + chr1_4:54737709-54737728 Msa0170570:intron 20.0%
!! CTTTATACCAATTAATATTC+GGG + chr1_4:54737811-54737830 Msa0170570:intron 20.0%
!! TTATTATAGATGTCGTAAAA+TGG - chr1_4:54737864-54737883 None:intergenic 20.0%
!! AAAATAAACCCATTCAATAT+AGG - chr1_4:54737982-54738001 None:intergenic 20.0%
!!! GTTCTAGATTTTAACAAATC+CGG + chr1_4:54732423-54732442 Msa0170570:intron 25.0%
!!! TTCTAGATTTTAACAAATCC+GGG + chr1_4:54732424-54732443 Msa0170570:intron 25.0%
! CACAAACAAAAGAAAACTAA+TGG - chr1_4:54732528-54732547 None:intergenic 25.0%
! CTATAGCATTACTATTAATC+TGG - chr1_4:54732667-54732686 None:intergenic 25.0%
! ATAGAGACAATATATCAAAC+AGG - chr1_4:54732889-54732908 None:intergenic 25.0%
!! TATGAATTTTCACCTGTAAT+TGG + chr1_4:54732906-54732925 Msa0170570:intron 25.0%
!!! TTTGTTATTATACTCGAAAG+TGG - chr1_4:54733074-54733093 None:intergenic 25.0%
! TTAACCTTTCTATTCTATGT+TGG + chr1_4:54733111-54733130 Msa0170570:intron 25.0%
! TAAACCAACATAGAATAGAA+AGG - chr1_4:54733118-54733137 None:intergenic 25.0%
! ATATCTAATTTCTTCCAACA+GGG - chr1_4:54733635-54733654 None:intergenic 25.0%
! AGTAATGAGAAATTGTGTAT+AGG - chr1_4:54733686-54733705 None:intergenic 25.0%
!! TTTTATCTTCTAATGAGATC+TGG + chr1_4:54733706-54733725 Msa0170570:intron 25.0%
!!! TAGTCTGCACATTTTTTTTA+TGG - chr1_4:54733865-54733884 None:intergenic 25.0%
! AACTGCCTAATATATCAAAT+GGG + chr1_4:54733918-54733937 Msa0170570:intron 25.0%
! TTACACCCATTTGATATATT+AGG - chr1_4:54733926-54733945 None:intergenic 25.0%
! TTTCTCAAAGTAACTTATCA+TGG - chr1_4:54734356-54734375 None:intergenic 25.0%
!! TGAATTTTATGTAGATTGTG+TGG + chr1_4:54734545-54734564 Msa0170570:intron 25.0%
!! TCAAAATTCATTGACTGATA+TGG + chr1_4:54734772-54734791 Msa0170570:intron 25.0%
! ATCATTAACATGAAATCCAA+CGG - chr1_4:54734836-54734855 None:intergenic 25.0%
! AAAGGATATCATAGAAATCA+CGG - chr1_4:54735088-54735107 None:intergenic 25.0%
!!! TATTACGTGCAATTTTTTAC+CGG - chr1_4:54735116-54735135 None:intergenic 25.0%
! TTTCTAATTCAATACACAAC+AGG + chr1_4:54735388-54735407 Msa0170570:intron 25.0%
!!! TTTTTTTACTGGTGTTTGTT+TGG + chr1_4:54735474-54735493 Msa0170570:intron 25.0%
! TTACAAATAGTTCATAACAC+AGG - chr1_4:54735698-54735717 None:intergenic 25.0%
! TTATAATTCTCATTGTGTCA+TGG + chr1_4:54735900-54735919 Msa0170570:intron 25.0%
! CATTCCAAGTATGTATTAAT+TGG + chr1_4:54735961-54735980 Msa0170570:intron 25.0%
! TTCAAACCTTCAATTTCTTA+TGG - chr1_4:54736360-54736379 None:intergenic 25.0%
! ACATATAAATCCTTATTGTG+TGG + chr1_4:54736478-54736497 Msa0170570:intron 25.0%
! CTAAAATTTCAGTGTTTCTT+CGG - chr1_4:54736504-54736523 None:intergenic 25.0%
!! GAAACACTGAAATTTTAGAT+TGG + chr1_4:54736506-54736525 Msa0170570:intron 25.0%
! TAGTCAATTGTCTGTTATTA+AGG + chr1_4:54736924-54736943 Msa0170570:intron 25.0%
!! TTTTTCTTTCTGTTTCAAAC+TGG + chr1_4:54737350-54737369 Msa0170570:intron 25.0%
! ATTCAGAACATTAACACAAA+CGG - chr1_4:54737435-54737454 None:intergenic 25.0%
!! AAGATAGATTTTATCCTGAA+TGG + chr1_4:54737455-54737474 Msa0170570:intron 25.0%
!! AGATAGATTTTATCCTGAAT+GGG + chr1_4:54737456-54737475 Msa0170570:intron 25.0%
!! ATTCATTTGAAATCACAACT+TGG + chr1_4:54737490-54737509 Msa0170570:intron 25.0%
!!! AGATCCTTTTCACTTTTATT+TGG + chr1_4:54737554-54737573 Msa0170570:intron 25.0%
! CTTACCAAATAAAAGTGAAA+AGG - chr1_4:54737561-54737580 None:intergenic 25.0%
!!! TCACTTTTATTTGGTAAGAT+TGG + chr1_4:54737563-54737582 Msa0170570:intron 25.0%
!!! ATCTTCACTTTTATTGCTTT+TGG - chr1_4:54738140-54738159 None:intergenic 25.0%
! AAAAGCAATAAAAGTGAAGA+TGG + chr1_4:54738139-54738158 Msa0170570:CDS 25.0%
! ATGAAAAAGAAGCTAATTGA+AGG + chr1_4:54738469-54738488 Msa0170570:CDS 25.0%
! AAGAAGCAGAAATTAATTGA+AGG + chr1_4:54738658-54738677 Msa0170570:CDS 25.0%
! AAGTGAAGAAAGTAAACATA+AGG + chr1_4:54738771-54738790 Msa0170570:CDS 25.0%
! TATATAGATTCTCATGGTTT+GGG + chr1_4:54739324-54739343 Msa0170570:CDS 25.0%
!!! CCATGTTGTGATTTTTTATA+AGG - chr1_4:54739720-54739739 None:intergenic 25.0%
! CCTTATAAAAAATCACAACA+TGG + chr1_4:54739717-54739736 Msa0170570:CDS 25.0%
! TTTTGCAATAAAAATCTGGG+TGG + chr1_4:54732322-54732341 Msa0170570:intron 30.0%
!!! TTTTTTATGGGTAGAAGATG+AGG + chr1_4:54732379-54732398 Msa0170570:intron 30.0%
AAATGAAATAGTACAGAACC+CGG - chr1_4:54732445-54732464 None:intergenic 30.0%
TGTATGTATATGCTTGATAG+AGG + chr1_4:54732546-54732565 Msa0170570:intron 30.0%
TTGGGTTACTAAAAGAATCA+TGG + chr1_4:54732622-54732641 Msa0170570:intron 30.0%
AGGCTGGAACAAAAAAAAAA+TGG - chr1_4:54732751-54732770 None:intergenic 30.0%
!!! TTTTTTTTTTGTTCCAGCCT+TGG + chr1_4:54732751-54732770 Msa0170570:intron 30.0%
ACAAATTCCTCTTTGTGAAT+AGG + chr1_4:54732838-54732857 Msa0170570:intron 30.0%
AGAAAAACCTATTCACAAAG+AGG - chr1_4:54732848-54732867 None:intergenic 30.0%
!! AACAAAGTTTGTTACACAGT+TGG + chr1_4:54733088-54733107 Msa0170570:intron 30.0%
TTGGTCCTATTAGGAATTAA+AGG + chr1_4:54733503-54733522 Msa0170570:intron 30.0%
CCATACCTTTAATTCCTAAT+AGG - chr1_4:54733511-54733530 None:intergenic 30.0%
CCTATTAGGAATTAAAGGTA+TGG + chr1_4:54733508-54733527 Msa0170570:intron 30.0%
CATATCTAATTTCTTCCAAC+AGG - chr1_4:54733636-54733655 None:intergenic 30.0%
GAACTGCCTAATATATCAAA+TGG + chr1_4:54733917-54733936 Msa0170570:intron 30.0%
TGATTATTTCAGCAATGTCA+TGG + chr1_4:54734129-54734148 Msa0170570:intron 30.0%
AATGGAAGAGAATATAAGAG+AGG + chr1_4:54734429-54734448 Msa0170570:intron 30.0%
ATGGAAGAGAATATAAGAGA+GGG + chr1_4:54734430-54734449 Msa0170570:intron 30.0%
AGAATAACAAAACAGCATGT+GGG - chr1_4:54734634-54734653 None:intergenic 30.0%
TTGTTAGCATGGTAGTAAAA+TGG - chr1_4:54734719-54734738 None:intergenic 30.0%
TTCTTCATATATAGCTCCAT+TGG + chr1_4:54734748-54734767 Msa0170570:intron 30.0%
!! GTCAATGAATTTTGATCCAA+TGG - chr1_4:54734767-54734786 None:intergenic 30.0%
ATGGACATGTAAATGAACTA+AGG + chr1_4:54734791-54734810 Msa0170570:intron 30.0%
TGGACATGTAAATGAACTAA+GGG + chr1_4:54734792-54734811 Msa0170570:intron 30.0%
TGACCTTTCACTATCATATA+GGG + chr1_4:54734912-54734931 Msa0170570:intron 30.0%
!!! AATTTTTTACCGGTGCAAAA+AGG - chr1_4:54735106-54735125 None:intergenic 30.0%
TTTCATTCCAAGTGTTTGAT+AGG + chr1_4:54735276-54735295 Msa0170570:intron 30.0%
AAAAAGACCTATCAAACACT+TGG - chr1_4:54735286-54735305 None:intergenic 30.0%
! TGTCATCTGTTTTCTGTTTT+TGG + chr1_4:54735434-54735453 Msa0170570:intron 30.0%
!! GTCATCTGTTTTCTGTTTTT+GGG + chr1_4:54735435-54735454 Msa0170570:intron 30.0%
!!! ATTTTGGTTCTCCAATTGTT+AGG + chr1_4:54735636-54735655 Msa0170570:intron 30.0%
!! CAATTGTTAGGAGTTTTAGT+GGG + chr1_4:54735648-54735667 Msa0170570:intron 30.0%
!! AATTGTTAGGAGTTTTAGTG+GGG + chr1_4:54735649-54735668 Msa0170570:intron 30.0%
!! TTTTCGTTGTTTAAAACCAC+TGG + chr1_4:54735853-54735872 Msa0170570:intron 30.0%
TCAAACTTACAGAGTCATAT+AGG + chr1_4:54736060-54736079 Msa0170570:intron 30.0%
TATAGGTGCGAAATATCATA+AGG - chr1_4:54736176-54736195 None:intergenic 30.0%
TGAAATATATATGATCCGTG+CGG + chr1_4:54736226-54736245 Msa0170570:intron 30.0%
AACCTTCAATTTCTTATGGA+TGG - chr1_4:54736356-54736375 None:intergenic 30.0%
!! GAAATTTTAGATTGGTTGCT+TGG + chr1_4:54736514-54736533 Msa0170570:intron 30.0%
ACACAAAAATGACTCAACAA+CGG - chr1_4:54736600-54736619 None:intergenic 30.0%
!!! TTGTTGAGTCATTTTTGTGT+TGG + chr1_4:54736600-54736619 Msa0170570:intron 30.0%
! ACAATTGAGTCCATCATTTT+GGG + chr1_4:54736629-54736648 Msa0170570:intron 30.0%
!!! TAGTCATTTTTGAGCTTTGT+AGG + chr1_4:54736687-54736706 Msa0170570:intron 30.0%
AAAAACCAAAGGTAGAGAAA+GGG - chr1_4:54736722-54736741 None:intergenic 30.0%
TAAAAACCAAAGGTAGAGAA+AGG - chr1_4:54736723-54736742 None:intergenic 30.0%
AAAATTAATTCTGGGCCATA+TGG + chr1_4:54736773-54736792 Msa0170570:intron 30.0%
!!! TGTGGTACATTTGTTACTTT+TGG + chr1_4:54736800-54736819 Msa0170570:intron 30.0%
TCTTACTAAGTTTCACGATA+AGG - chr1_4:54736830-54736849 None:intergenic 30.0%
CAAAACTTTCAATATTCCGA+TGG - chr1_4:54736890-54736909 None:intergenic 30.0%
CAAGATTGAGATCTTAACTA+AGG + chr1_4:54736951-54736970 Msa0170570:intron 30.0%
!! CTAAATTTTTAAGCGCAGTT+AGG - chr1_4:54737242-54737261 None:intergenic 30.0%
CTAACTGCGCTTAAAAATTT+AGG + chr1_4:54737240-54737259 Msa0170570:intron 30.0%
!! TTTTAACATAGTAGCTTTGC+TGG + chr1_4:54737735-54737754 Msa0170570:intron 30.0%
ATGTGATGTCCTATATTGAA+TGG + chr1_4:54737970-54737989 Msa0170570:intron 30.0%
TGTGATGTCCTATATTGAAT+GGG + chr1_4:54737971-54737990 Msa0170570:intron 30.0%
!! TTATTTTGCAGTCATTGAAG+AGG + chr1_4:54737995-54738014 Msa0170570:intron 30.0%
! TATTTTGCAGTCATTGAAGA+GGG + chr1_4:54737996-54738015 Msa0170570:intron 30.0%
!!! AGTTCTTTTGTTTTCTTGCT+CGG - chr1_4:54738044-54738063 None:intergenic 30.0%
!! CTTTTATTGCTTTTGGTCAA+AGG - chr1_4:54738133-54738152 None:intergenic 30.0%
GAAAGAAGATGAAAAAGAAG+CGG + chr1_4:54738269-54738288 Msa0170570:CDS 30.0%
! AACAACTTTAGAAGCAATGA+AGG + chr1_4:54738325-54738344 Msa0170570:CDS 30.0%
GGGAAAGAAGAAAAAGAAAA+AGG + chr1_4:54738363-54738382 Msa0170570:CDS 30.0%
!! TCTTTTTCATCTTCTTTCCT+TGG - chr1_4:54738459-54738478 None:intergenic 30.0%
!! TCTTTTTCGTCTTTTTTCCT+TGG - chr1_4:54738642-54738661 None:intergenic 30.0%
! TGTAATGACTTTAGAAGCAA+TGG + chr1_4:54738697-54738716 Msa0170570:CDS 30.0%
TCATCATCTTCACATTCATT+TGG - chr1_4:54738244-54738263 None:intergenic 30.0%
AATGAATGTGAAGATGATGA+TGG + chr1_4:54738244-54738263 Msa0170570:CDS 30.0%
! TCTTCTTCATTTTCTTTCCT+TGG - chr1_4:54738840-54738859 None:intergenic 30.0%
GAAGAAGAAGAAACTAATTG+AGG + chr1_4:54738861-54738880 Msa0170570:CDS 30.0%
AGTGACATTATAAGCAATGA+AGG + chr1_4:54738904-54738923 Msa0170570:CDS 30.0%
TTGATCATTAACTTCACTGA+CGG - chr1_4:54739082-54739101 None:intergenic 30.0%
TAAACGCAAACAAGTAACTT+GGG + chr1_4:54739203-54739222 Msa0170570:CDS 30.0%
TTTGATCTTCTCATCTTCTT+CGG - chr1_4:54739289-54739308 None:intergenic 30.0%
TTGGAGTATATAGATTCTCA+TGG + chr1_4:54739318-54739337 Msa0170570:CDS 30.0%
GTATATAGATTCTCATGGTT+TGG + chr1_4:54739323-54739342 Msa0170570:CDS 30.0%
!!! CCAATGTCCTTTTTTTGTTT+TGG - chr1_4:54739631-54739650 None:intergenic 30.0%
CCAAAACAAAAAAAGGACAT+TGG + chr1_4:54739628-54739647 Msa0170570:CDS 30.0%
!! CAAATTTTGATACTCCTCTT+GGG - chr1_4:54739655-54739674 None:intergenic 30.0%
!! ACAAATTTTGATACTCCTCT+TGG - chr1_4:54739656-54739675 None:intergenic 30.0%
TGTTGCGAGATAATATTTGT+TGG + chr1_4:54739742-54739761 Msa0170570:CDS 30.0%
GTTGCGAGATAATATTTGTT+GGG + chr1_4:54739743-54739762 Msa0170570:CDS 30.0%
! CATATAAAGCGTTTATCAAG+CGG - chr1_4:54739884-54739903 None:intergenic 30.0%
GATAAACGCTTTATATGCTT+TGG + chr1_4:54739887-54739906 Msa0170570:CDS 30.0%
AACAAATGATCCACCATATT+GGG + chr1_4:54739988-54740007 Msa0170570:CDS 30.0%
ATGAGGCTGTCGAAAAAATT+GGG + chr1_4:54732396-54732415 Msa0170570:intron 35.0%
TAGAAGTAGTTGACATCTAG+AGG + chr1_4:54732684-54732703 Msa0170570:intron 35.0%
! AGGAAGTATATTAACAGCCT+TGG + chr1_4:54732704-54732723 Msa0170570:intron 35.0%
ACAATATATCAAACAGGTGG+TGG - chr1_4:54732883-54732902 None:intergenic 35.0%
GAGACAATATATCAAACAGG+TGG - chr1_4:54732886-54732905 None:intergenic 35.0%
GCAGAACTAAAGTTGACATT+GGG + chr1_4:54733476-54733495 Msa0170570:intron 35.0%
! AAAGTTGACATTGGGTTGTT+TGG + chr1_4:54733484-54733503 Msa0170570:intron 35.0%
GGATTTAATTGAGTCATCAG+AGG + chr1_4:54734027-54734046 Msa0170570:intron 35.0%
TGGAAGAGAATATAAGAGAG+GGG + chr1_4:54734431-54734450 Msa0170570:intron 35.0%
AGTTTGCATGGTATATTGTG+AGG + chr1_4:54734457-54734476 Msa0170570:intron 35.0%
CAGAATAACAAAACAGCATG+TGG - chr1_4:54734635-54734654 None:intergenic 35.0%
CTGACCTTTCACTATCATAT+AGG + chr1_4:54734911-54734930 Msa0170570:intron 35.0%
AATTGAATCGATGTTGTAGC+TGG + chr1_4:54735017-54735036 Msa0170570:intron 35.0%
GTTGTAGCTGGAAAAGTAAA+TGG + chr1_4:54735029-54735048 Msa0170570:intron 35.0%
! CTATGATATCCTTTTTGCAC+CGG + chr1_4:54735094-54735113 Msa0170570:intron 35.0%
CAAACACTTGGAATGAAAAG+TGG - chr1_4:54735274-54735293 None:intergenic 35.0%
!!! TTTTCTGTTTTTGGGAGCTT+CGG + chr1_4:54735443-54735462 Msa0170570:intron 35.0%
!! TGTTTTCGCAGTCTGTTTTT+TGG + chr1_4:54735505-54735524 Msa0170570:intron 35.0%
!!! GTTTTCGCAGTCTGTTTTTT+GGG + chr1_4:54735506-54735525 Msa0170570:intron 35.0%
TCTAACAACTTAGCAAAGCT+AGG - chr1_4:54735610-54735629 None:intergenic 35.0%
! AGTTGTTAGAGCAGCAATTT+TGG + chr1_4:54735620-54735639 Msa0170570:intron 35.0%
CCACTAAAACTCCTAACAAT+TGG - chr1_4:54735650-54735669 None:intergenic 35.0%
!! CCAATTGTTAGGAGTTTTAG+TGG + chr1_4:54735647-54735666 Msa0170570:intron 35.0%
TTTACAGTTCAGCACCATTA+AGG - chr1_4:54735769-54735788 None:intergenic 35.0%
TGAAATACCCTGCAAAAACA+CGG - chr1_4:54735810-54735829 None:intergenic 35.0%
GCTGCCAATTAATACATACT+TGG - chr1_4:54735968-54735987 None:intergenic 35.0%
AATTTCTTATGGATGGACGA+TGG - chr1_4:54736349-54736368 None:intergenic 35.0%
GTCCATCCATAAGAAATTGA+AGG + chr1_4:54736351-54736370 Msa0170570:intron 35.0%
ATTGAAATTTATTGCGCTGC+AGG - chr1_4:54736562-54736581 None:intergenic 35.0%
!!! AGTCATTTTTGTGTTGGCTA+GGG + chr1_4:54736606-54736625 Msa0170570:intron 35.0%
! GACAATTGAGTCCATCATTT+TGG + chr1_4:54736628-54736647 Msa0170570:intron 35.0%
AAAACCAAAGGTAGAGAAAG+GGG - chr1_4:54736721-54736740 None:intergenic 35.0%
AATGTACCACAACAACCATA+TGG - chr1_4:54736791-54736810 None:intergenic 35.0%
ATATCTAGTGTCTAGTCCAT+CGG + chr1_4:54736871-54736890 Msa0170570:intron 35.0%
AGATCTTAACTAAGGTTGAG+AGG + chr1_4:54736959-54736978 Msa0170570:intron 35.0%
GATCTTAACTAAGGTTGAGA+GGG + chr1_4:54736960-54736979 Msa0170570:intron 35.0%
CAGACTGCACTTCAAAATTT+AGG + chr1_4:54737175-54737194 Msa0170570:intron 35.0%
!! TTCTGCACTTTTTATCCAAC+CGG + chr1_4:54737201-54737220 Msa0170570:intron 35.0%
!!! TATCCTGAATGGGCTTTTTT+TGG + chr1_4:54737466-54737485 Msa0170570:intron 35.0%
ATACCAAAAAAAGCCCATTC+AGG - chr1_4:54737472-54737491 None:intergenic 35.0%
TTCAAAGCTTGATATCAGAC+TGG + chr1_4:54737629-54737648 Msa0170570:intron 35.0%
TCAAAGCTTGATATCAGACT+GGG + chr1_4:54737630-54737649 Msa0170570:intron 35.0%
TGGCATTCCCGAATATTAAT+TGG - chr1_4:54737821-54737840 None:intergenic 35.0%
! ATTTTGCAGTCATTGAAGAG+GGG + chr1_4:54737997-54738016 Msa0170570:intron 35.0%
AAAAGAACTGAAGAAGACGA+GGG + chr1_4:54738055-54738074 Msa0170570:CDS 35.0%
ACATTGCTTTCGGACATATA+TGG - chr1_4:54738100-54738119 None:intergenic 35.0%
!! TCTTTTTCATCTTCTTTCCG+TGG - chr1_4:54738267-54738286 None:intergenic 35.0%
AGAAGCAATGAAGGTGATAA+TGG + chr1_4:54738334-54738353 Msa0170570:CDS 35.0%
GAGTGAGAAAAGCAAACATA+AGG + chr1_4:54738393-54738412 Msa0170570:CDS 35.0%
! AGAAGCAATGATGATGAAGA+TGG + chr1_4:54738520-54738539 Msa0170570:CDS 35.0%
AAGAAGAAACCAAGTGAAGA+AGG + chr1_4:54738568-54738587 Msa0170570:CDS 35.0%
AATGATTGTGAAGATGACCA+AGG + chr1_4:54738622-54738641 Msa0170570:CDS 35.0%
! AATGACTTTAGAAGCAATGG+AGG + chr1_4:54738700-54738719 Msa0170570:CDS 35.0%
AATTGAGGAAGCCAAACTTA+AGG + chr1_4:54738876-54738895 Msa0170570:CDS 35.0%
GTCACTATACTCCTTAAGTT+TGG - chr1_4:54738890-54738909 None:intergenic 35.0%
GTCACTGAAGTTAATGATGA+AGG + chr1_4:54738949-54738968 Msa0170570:CDS 35.0%
GTCAGTGAAGTTAATGATCA+AGG + chr1_4:54739081-54739100 Msa0170570:CDS 35.0%
GTTTCATTATGTGCACAGTT+AGG - chr1_4:54739156-54739175 None:intergenic 35.0%
CTAAACGCAAACAAGTAACT+TGG + chr1_4:54739202-54739221 Msa0170570:CDS 35.0%
TTGATCTTCTCATCTTCTTC+GGG - chr1_4:54739288-54739307 None:intergenic 35.0%
TTTCTAACAAAGCATGAGCA+CGG - chr1_4:54739461-54739480 None:intergenic 35.0%
! TGCTCATGCTTTGTTAGAAA+GGG + chr1_4:54739461-54739480 Msa0170570:CDS 35.0%
TCAATAAATTCCAGCTCTTC+AGG - chr1_4:54739507-54739526 None:intergenic 35.0%
! AATATTTGTTGGGAGGCAAT+TGG + chr1_4:54739753-54739772 Msa0170570:CDS 35.0%
GAACAAATGATCCACCATAT+TGG + chr1_4:54739987-54740006 Msa0170570:CDS 35.0%
ACAAATGATCCACCATATTG+GGG + chr1_4:54739989-54740008 Msa0170570:CDS 35.0%
CTCTATCTTTCAACAGGTTA+GGG - chr1_4:54740070-54740089 None:intergenic 35.0%
TCTCTATCTTTCAACAGGTT+AGG - chr1_4:54740071-54740090 None:intergenic 35.0%
TAACCTGTTGAAAGATAGAG+AGG + chr1_4:54740070-54740089 Msa0170570:CDS 35.0%
!! AATCACAGGTTTGTTGTCAA+AGG - chr1_4:54740096-54740115 None:intergenic 35.0%
GATGAGGCTGTCGAAAAAAT+TGG + chr1_4:54732395-54732414 Msa0170570:intron 40.0%
AATGGATGCTCAAGAGTGAA+GGG - chr1_4:54732510-54732529 None:intergenic 40.0%
! TAATGGATGCTCAAGAGTGA+AGG - chr1_4:54732511-54732530 None:intergenic 40.0%
TATGCTTGATAGAGGATCCA+AGG + chr1_4:54732554-54732573 Msa0170570:intron 40.0%
ATGCTTGATAGAGGATCCAA+GGG + chr1_4:54732555-54732574 Msa0170570:intron 40.0%
GTTCTCATGAGAATTTGCCA+AGG - chr1_4:54732771-54732790 None:intergenic 40.0%
CGGAAGACATAAGCTACAAA+AGG + chr1_4:54732810-54732829 Msa0170570:CDS 40.0%
!! GTCAACTTTAGTTCTGCGTA+AGG - chr1_4:54733473-54733492 None:intergenic 40.0%
CGCAGAACTAAAGTTGACAT+TGG + chr1_4:54733475-54733494 Msa0170570:intron 40.0%
! TTGGGTTGTTTGGTCCTATT+AGG + chr1_4:54733494-54733513 Msa0170570:intron 40.0%
CACTTTGTCTATTTCCCTGT+TGG + chr1_4:54733618-54733637 Msa0170570:intron 40.0%
! TGTAAAGCATCTGACAAGGA+GGG + chr1_4:54733941-54733960 Msa0170570:intron 40.0%
CGTATTTCGACATTGAAGGA+TGG + chr1_4:54733997-54734016 Msa0170570:intron 40.0%
!! TAAAATGGAGTTGATGACCG+TGG + chr1_4:54734204-54734223 Msa0170570:intron 40.0%
CTGAATGTGTAAGCATCAAC+TGG - chr1_4:54734495-54734514 None:intergenic 40.0%
TAACAAAACAGCATGTGGGA+AGG - chr1_4:54734630-54734649 None:intergenic 40.0%
! GCACCCTATATGATAGTGAA+AGG - chr1_4:54734918-54734937 None:intergenic 40.0%
AAATCAGCAACAAACATGGG+AGG - chr1_4:54734951-54734970 None:intergenic 40.0%
CCGAAATCAGCAACAAACAT+GGG - chr1_4:54734954-54734973 None:intergenic 40.0%
!! CCCATGTTTGTTGCTGATTT+CGG + chr1_4:54734951-54734970 Msa0170570:intron 40.0%
ACCGAAATCAGCAACAAACA+TGG - chr1_4:54734955-54734974 None:intergenic 40.0%
ACGGAGAGCAAACCATTATT+TGG - chr1_4:54735069-54735088 None:intergenic 40.0%
!!! GAGTCATTTTTGTGTTGGCT+AGG + chr1_4:54736605-54736624 Msa0170570:intron 40.0%
AAACCAAAGGTAGAGAAAGG+GGG - chr1_4:54736720-54736739 None:intergenic 40.0%
CAAGTTCGTAACACGTAAGA+TGG + chr1_4:54736988-54737007 Msa0170570:intron 40.0%
TTTCTCTCTCAATCCAATGC+AGG - chr1_4:54737021-54737040 None:intergenic 40.0%
ATTGAGAGAGAAAGAGTGAG+AGG + chr1_4:54737028-54737047 Msa0170570:intron 40.0%
! TTGATGATCTGTGTGAGAGA+GGG + chr1_4:54737079-54737098 Msa0170570:intron 40.0%
!! TCTGCACTTTTTATCCAACC+GGG + chr1_4:54737202-54737221 Msa0170570:intron 40.0%
!! AAATCACAACTTGGTGCTCT+TGG + chr1_4:54737499-54737518 Msa0170570:intron 40.0%
CAAAAGAACTGAAGAAGACG+AGG + chr1_4:54738054-54738073 Msa0170570:CDS 40.0%
CATATATGGATCACCTCCAT+TGG - chr1_4:54738086-54738105 None:intergenic 40.0%
CAGATCAGCTACATTGCTTT+CGG - chr1_4:54738110-54738129 None:intergenic 40.0%
GAATGTGAAGATGATGACCA+CGG + chr1_4:54738247-54738266 Msa0170570:CDS 40.0%
AGTTGAAGGAAACACACTTG+AGG + chr1_4:54738297-54738316 Msa0170570:CDS 40.0%
AAATGTGAAGCTGACAACCA+AGG + chr1_4:54738439-54738458 Msa0170570:CDS 40.0%
! AATTGAAGGAAGCACACTGA+AGG + chr1_4:54738483-54738502 Msa0170570:CDS 40.0%
TTATGTGTGCCTTCTTCACT+TGG - chr1_4:54738580-54738599 None:intergenic 40.0%
! AAGTGAAGAAGGCACACATA+AGG + chr1_4:54738579-54738598 Msa0170570:CDS 40.0%
GTTTCATTACGTGCACAGTT+AGG - chr1_4:54739024-54739043 None:intergenic 40.0%
AATGAAACTCCTGGCAATGA+AGG + chr1_4:54739036-54739055 Msa0170570:CDS 40.0%
ACTCCTAACTCTGCACATAA+TGG + chr1_4:54739174-54739193 Msa0170570:CDS 40.0%
GTTCCATTATGTGCAGAGTT+AGG - chr1_4:54739180-54739199 None:intergenic 40.0%
GAGGAGAAGTTATGTTGTGA+CGG + chr1_4:54739237-54739256 Msa0170570:CDS 40.0%
! GAAGATCAAAGCAGCTGTTT+TGG + chr1_4:54739299-54739318 Msa0170570:CDS 40.0%
AAATGTCAAATTACACCCCG+AGG + chr1_4:54739371-54739390 Msa0170570:CDS 40.0%
CGGTTATACACACTGTAATG+AGG - chr1_4:54739441-54739460 None:intergenic 40.0%
! GTGCTCATGCTTTGTTAGAA+AGG + chr1_4:54739460-54739479 Msa0170570:CDS 40.0%
! TCATGCTTTGTTAGAAAGGG+AGG + chr1_4:54739464-54739483 Msa0170570:CDS 40.0%
! CATGCTTTGTTAGAAAGGGA+GGG + chr1_4:54739465-54739484 Msa0170570:CDS 40.0%
! ATGCTTTGTTAGAAAGGGAG+GGG + chr1_4:54739466-54739485 Msa0170570:CDS 40.0%
TTTGGGTAAAAGTCGAGATC+AGG + chr1_4:54739575-54739594 Msa0170570:CDS 40.0%
GAGATCAGGTAAAAGATGCA+TGG + chr1_4:54739589-54739608 Msa0170570:CDS 40.0%
! GCGAGATAATATTTGTTGGG+AGG + chr1_4:54739746-54739765 Msa0170570:CDS 40.0%
CGAGCAATTAACATCAGCAT+TGG + chr1_4:54739824-54739843 Msa0170570:CDS 40.0%
GTTTATCAAGCGGAAGTCAT+CGG - chr1_4:54739874-54739893 None:intergenic 40.0%
AATCTACTTGAGCATAGGTC+TGG + chr1_4:54739942-54739961 Msa0170570:CDS 40.0%
TGATGTATGCAGGAAACGAT+GGG + chr1_4:54739965-54739984 Msa0170570:CDS 40.0%
CTTATATCCCTCACTACCCT+TGG - chr1_4:54732574-54732593 None:intergenic 45.0%
TCATGAGAATTTGCCAAGGC+TGG - chr1_4:54732767-54732786 None:intergenic 45.0%
!! TCAAACAGGTGGTGGACAAA+AGG - chr1_4:54732875-54732894 None:intergenic 45.0%
CTCGAAAGTGGAAATAGTCG+TGG - chr1_4:54733062-54733081 None:intergenic 45.0%
! TGGGTGTAAAGCATCTGACA+AGG + chr1_4:54733937-54733956 Msa0170570:intron 45.0%
! GTGTAAAGCATCTGACAAGG+AGG + chr1_4:54733940-54733959 Msa0170570:intron 45.0%
! GTAAAGCATCTGACAAGGAG+GGG + chr1_4:54733942-54733961 Msa0170570:intron 45.0%
AAGGAGGGGATTAACTGACA+TGG + chr1_4:54733956-54733975 Msa0170570:intron 45.0%
GCAGCGTATTTCGACATTGA+AGG + chr1_4:54733993-54734012 Msa0170570:intron 45.0%
ACATTGAAGGATGGCGATCA+AGG + chr1_4:54734006-54734025 Msa0170570:intron 45.0%
GCAATGTCATGGAGTTGTGA+TGG + chr1_4:54734140-54734159 Msa0170570:intron 45.0%
AACTATCGAACACATGCCGT+TGG + chr1_4:54734817-54734836 Msa0170570:intron 45.0%
! ACTGGTGTTTGTTTGGAGCT+TGG + chr1_4:54735481-54735500 Msa0170570:intron 45.0%
! ACCACTTTGTAGCCTCCTTT+TGG + chr1_4:54735547-54735566 Msa0170570:intron 45.0%
ACCAAAAGGAGGCTACAAAG+TGG - chr1_4:54735551-54735570 None:intergenic 45.0%
CGCTAAACTACACCAAAAGG+AGG - chr1_4:54735562-54735581 None:intergenic 45.0%
!! CCTTTTGGTGTAGTTTAGCG+CGG + chr1_4:54735562-54735581 Msa0170570:intron 45.0%
ACACAGGTTCTGCACAGAAA+CGG - chr1_4:54735682-54735701 None:intergenic 45.0%
!! AGTTGCTACCGTGTTTTTGC+AGG + chr1_4:54735799-54735818 Msa0170570:intron 45.0%
!! GTTGCTACCGTGTTTTTGCA+GGG + chr1_4:54735800-54735819 Msa0170570:intron 45.0%
TTCTTATGGATGGACGATGG+TGG - chr1_4:54736346-54736365 None:intergenic 45.0%
GTTTCTTCGGCCACACAATA+AGG - chr1_4:54736491-54736510 None:intergenic 45.0%
!!! AGGTTTTCAGGTCAGATCAC+TGG - chr1_4:54736542-54736561 None:intergenic 45.0%
! TTATTGCGCTGCAGGTTTTC+AGG - chr1_4:54736554-54736573 None:intergenic 45.0%
ATACCCCCTTTCTCTACCTT+TGG + chr1_4:54736714-54736733 Msa0170570:intron 45.0%
TCTCTCAATCCAATGCAGGA+AGG - chr1_4:54737017-54737036 None:intergenic 45.0%
!! GTTGATGATCTGTGTGAGAG+AGG + chr1_4:54737078-54737097 Msa0170570:intron 45.0%
TAGAATGTGAGACTCCAGAG+AGG + chr1_4:54737109-54737128 Msa0170570:intron 45.0%
CTTTCCTTCCTCGAATGGTA+GGG - chr1_4:54737151-54737170 None:intergenic 45.0%
GAATCCTTTCCTTCCTCGAA+TGG - chr1_4:54737156-54737175 None:intergenic 45.0%
TAGGTCAGATTTGCAAGACC+CGG - chr1_4:54737223-54737242 None:intergenic 45.0%
!! ACTTGGTGCTCTTGGTTTAG+TGG + chr1_4:54737507-54737526 Msa0170570:intron 45.0%
AAAAGTGAAGATGGCGAGCA+AGG + chr1_4:54738148-54738167 Msa0170570:CDS 45.0%
AAGAAGCGGAAGCTAGTTGA+AGG + chr1_4:54738283-54738302 Msa0170570:CDS 45.0%
TGAAGGAAACACACTTGAGG+AGG + chr1_4:54738300-54738319 Msa0170570:CDS 45.0%
GAAGGAAACACACTTGAGGA+GGG + chr1_4:54738301-54738320 Msa0170570:CDS 45.0%
TAGAAGCAATGGAGGTGAAG+AGG + chr1_4:54738708-54738727 Msa0170570:CDS 45.0%
AGAAGCAATGGAGGTGAAGA+GGG + chr1_4:54738709-54738728 Msa0170570:CDS 45.0%
!! TGTGAAGATGATGATGGCCA+AGG + chr1_4:54738820-54738839 Msa0170570:CDS 45.0%
TGTGCACGTAATGAAACTCC+TGG + chr1_4:54739027-54739046 Msa0170570:CDS 45.0%
ACAAGTAACTTGGGCTGATG+AGG + chr1_4:54739212-54739231 Msa0170570:CDS 45.0%
AAATTACACCCCGAGGTTAG+AGG + chr1_4:54739378-54739397 Msa0170570:CDS 45.0%
TTTCCAACAGCCTCTAACCT+CGG - chr1_4:54739391-54739410 None:intergenic 45.0%
! TCGCAAAAAGCATACCTGAG+AGG + chr1_4:54739415-54739434 Msa0170570:CDS 45.0%
GAAAAGACCTACGAGCAACA+TGG + chr1_4:54739525-54739544 Msa0170570:CDS 45.0%
ACTAGATCCATGTTGCTCGT+AGG - chr1_4:54739535-54739554 None:intergenic 45.0%
ACGAGCAACATGGATCTAGT+TGG + chr1_4:54739535-54739554 Msa0170570:CDS 45.0%
AGCAACATGGATCTAGTTGG+AGG + chr1_4:54739538-54739557 Msa0170570:CDS 45.0%
GCAACATGGATCTAGTTGGA+GGG + chr1_4:54739539-54739558 Msa0170570:CDS 45.0%
! TCGACTTTTACCCAAAGCGT+CGG - chr1_4:54739571-54739590 None:intergenic 45.0%
AAAAGGACATTGGTCCCAAG+AGG + chr1_4:54739638-54739657 Msa0170570:CDS 45.0%
TAAACCTAGATCTGCTCGAG+AGG + chr1_4:54739685-54739704 Msa0170570:CDS 45.0%
AAACCTAGATCTGCTCGAGA+GGG + chr1_4:54739686-54739705 Msa0170570:CDS 45.0%
GGAGGCAATTGGTCACAAAT+TGG + chr1_4:54739764-54739783 Msa0170570:CDS 45.0%
! GTGCATTTTGCTGCAAGAAG+TGG + chr1_4:54739799-54739818 Msa0170570:CDS 45.0%
!! ACATCAGCATTGGTTGCTAG+TGG + chr1_4:54739834-54739853 Msa0170570:CDS 45.0%
! CATTGGTTGCTAGTGGTGAT+TGG + chr1_4:54739841-54739860 Msa0170570:CDS 45.0%
GGGACAATCTACTTGAGCAT+AGG + chr1_4:54739937-54739956 Msa0170570:CDS 45.0%
! ATAGGTCTGGTGATGTATGC+AGG + chr1_4:54739955-54739974 Msa0170570:CDS 45.0%
GTGATGTATGCAGGAAACGA+TGG + chr1_4:54739964-54739983 Msa0170570:CDS 45.0%
AGCCAAGTCATTCATTGAGC+AGG + chr1_4:54740019-54740038 Msa0170570:CDS 45.0%
CACCTGCTCAATGAATGACT+TGG - chr1_4:54740024-54740043 None:intergenic 45.0%
CAAGTCATTCATTGAGCAGG+TGG + chr1_4:54740022-54740041 Msa0170570:CDS 45.0%
AGGCCTCTCTATCTTTCAAC+AGG - chr1_4:54740076-54740095 None:intergenic 45.0%
!!! TTAATATACTATTTTTTTAT+GGG + chr1_4:54732367-54732386 Msa0170570:intron 5.0%
!!! ACTTTTTAATAAAAAAATAT+AGG - chr1_4:54736193-54736212 None:intergenic 5.0%
TAGAGGATCCAAGGGTAGTG+AGG + chr1_4:54732563-54732582 Msa0170570:intron 50.0%
AGAGGATCCAAGGGTAGTGA+GGG + chr1_4:54732564-54732583 Msa0170570:intron 50.0%
CAAGCAACAACCACTGAACG+CGG + chr1_4:54732790-54732809 Msa0170570:CDS 50.0%
CTTATGTCTTCCGCGTTCAG+TGG - chr1_4:54732803-54732822 None:intergenic 50.0%
!! AGTTGATGACCGTGGTGCAA+AGG + chr1_4:54734212-54734231 Msa0170570:intron 50.0%
AGAGAGGGGATGAGTTTGCA+TGG + chr1_4:54734445-54734464 Msa0170570:intron 50.0%
! CAACAGGAACTTTGCTGTGC+TGG + chr1_4:54735404-54735423 Msa0170570:intron 50.0%
!!! CGGCTGGCAGGTTTTTTTAC+TGG + chr1_4:54735463-54735482 Msa0170570:intron 50.0%
CCGCGCTAAACTACACCAAA+AGG - chr1_4:54735565-54735584 None:intergenic 50.0%
TAGTTTAGCGCGGCTGTGTT+AGG + chr1_4:54735572-54735591 Msa0170570:intron 50.0%
AGTTTAGCGCGGCTGTGTTA+GGG + chr1_4:54735573-54735592 Msa0170570:intron 50.0%
CACAGGTTCTGCACAGAAAC+GGG - chr1_4:54735681-54735700 None:intergenic 50.0%
GGTTGTGCTCGTGTGTGTTA+GGG - chr1_4:54736294-54736313 None:intergenic 50.0%
! TTATGGATGGACGATGGTGG+TGG - chr1_4:54736343-54736362 None:intergenic 50.0%
TCTGGGCCATATGGTTGTTG+TGG + chr1_4:54736782-54736801 Msa0170570:intron 50.0%
CTCAATCCAATGCAGGAAGG+TGG - chr1_4:54737014-54737033 None:intergenic 50.0%
TGTGATTGAGCTGGTGGTTG+TGG + chr1_4:54737056-54737075 Msa0170570:intron 50.0%
TGAGACTCCAGAGAGGTTGA+AGG + chr1_4:54737116-54737135 Msa0170570:intron 50.0%
CCTTTCCTTCCTCGAATGGT+AGG - chr1_4:54737152-54737171 None:intergenic 50.0%
CCTACCATTCGAGGAAGGAA+AGG + chr1_4:54737149-54737168 Msa0170570:intron 50.0%
TCAGATTTGCAAGACCCGGT+TGG - chr1_4:54737219-54737238 None:intergenic 50.0%
TACGGTTTGCACGACCTGAT+TGG - chr1_4:54737286-54737305 None:intergenic 50.0%
ATCAGGTCGTGCAAACCGTA+AGG + chr1_4:54737286-54737305 Msa0170570:intron 50.0%
GAAGACGAGGGTGAAACCAA+TGG + chr1_4:54738067-54738086 Msa0170570:CDS 50.0%
!! TGAAGGTGATAATGGCGAGC+AGG + chr1_4:54738342-54738361 Msa0170570:CDS 50.0%
!! GAAGGTGATAATGGCGAGCA+GGG + chr1_4:54738343-54738362 Msa0170570:CDS 50.0%
TCAGCATCACCTTCATTGCC+AGG - chr1_4:54739048-54739067 None:intergenic 50.0%
AGTAACTTGGGCTGATGAGG+TGG + chr1_4:54739215-54739234 Msa0170570:CDS 50.0%
TGTTGTGACGGCTTATTGCG+TGG + chr1_4:54739249-54739268 Msa0170570:CDS 50.0%
GTTGTGACGGCTTATTGCGT+GGG + chr1_4:54739250-54739269 Msa0170570:CDS 50.0%
ACGGCTTATTGCGTGGGAAA+AGG + chr1_4:54739256-54739275 Msa0170570:CDS 50.0%
! TCTCATGGTTTGGGAGACGA+AGG + chr1_4:54739333-54739352 Msa0170570:CDS 50.0%
GGGAGACGAAGGTCTTGATA+TGG + chr1_4:54739344-54739363 Msa0170570:CDS 50.0%
TTCCAACAGCCTCTAACCTC+GGG - chr1_4:54739390-54739409 None:intergenic 50.0%
ACACTGTAATGAGGCCTCTC+AGG - chr1_4:54739432-54739451 None:intergenic 50.0%
CTTTGTTAGAAAGGGAGGGG+AGG + chr1_4:54739469-54739488 Msa0170570:CDS 50.0%
TAAGTGGACACCTGAAGAGC+TGG + chr1_4:54739494-54739513 Msa0170570:CDS 50.0%
! TGCTTTGGATGCTTGCTGCA+TGG + chr1_4:54739902-54739921 Msa0170570:CDS 50.0%
! TTTGGATGCTTGCTGCATGG+AGG + chr1_4:54739905-54739924 Msa0170570:CDS 50.0%
CATTGAGCAGGTGGAAGTTC+TGG + chr1_4:54740031-54740050 Msa0170570:CDS 50.0%
TGATGACCGTGGTGCAAAGG+AGG + chr1_4:54734215-54734234 Msa0170570:intron 55.0%
GACTCTCCTCCTTTGCACCA+CGG - chr1_4:54734224-54734243 None:intergenic 55.0%
!!! CTGTTTTTGGGAGCTTCGGC+TGG + chr1_4:54735447-54735466 Msa0170570:intron 55.0%
ATATGATCCGTGCGGCAGCA+CGG + chr1_4:54736234-54736253 Msa0170570:intron 55.0%
CGGTTGTGCTCGTGTGTGTT+AGG - chr1_4:54736295-54736314 None:intergenic 55.0%
AGATGGCCACCTTCCTGCAT+TGG + chr1_4:54737005-54737024 Msa0170570:intron 55.0%
GAGGCTGCTTGTGATTGAGC+TGG + chr1_4:54737047-54737066 Msa0170570:intron 55.0%
GCTGCTTGTGATTGAGCTGG+TGG + chr1_4:54737050-54737069 Msa0170570:intron 55.0%
CCTTCGACCTTCAACCTCTC+TGG - chr1_4:54737126-54737145 None:intergenic 55.0%
CCAGAGAGGTTGAAGGTCGA+AGG + chr1_4:54737123-54737142 Msa0170570:intron 55.0%
GACGAGGGTGAAACCAATGG+AGG + chr1_4:54738070-54738089 Msa0170570:CDS 55.0%
AACTTGGGCTGATGAGGTGG+AGG + chr1_4:54739218-54739237 Msa0170570:CDS 55.0%
TCCAACAGCCTCTAACCTCG+GGG - chr1_4:54739389-54739408 None:intergenic 55.0%
! AAAGGGAGGGGAGGTGTAAG+TGG + chr1_4:54739478-54739497 Msa0170570:CDS 55.0%
TAGCCCTCTCGAGCAGATCT+AGG - chr1_4:54739692-54739711 None:intergenic 55.0%
CTGCATGGAGGAGGTAGACT+GGG + chr1_4:54739917-54739936 Msa0170570:CDS 55.0%
CTGCATGCTCCCCAATATGG+TGG - chr1_4:54740001-54740020 None:intergenic 55.0%
TGGCTGCATGCTCCCCAATA+TGG - chr1_4:54740004-54740023 None:intergenic 55.0%
!! TTTTGGGAGCTTCGGCTGGC+AGG + chr1_4:54735451-54735470 Msa0170570:intron 60.0%
TCGGTTCTGTGCAGCACCAG+TGG - chr1_4:54735872-54735891 None:intergenic 60.0%
TATGATCCGTGCGGCAGCAC+GGG + chr1_4:54736235-54736254 Msa0170570:intron 60.0%
! TTTTCACCCGTGCTGCCGCA+CGG - chr1_4:54736244-54736263 None:intergenic 60.0%
!! GATGGACGATGGTGGTGGCT+CGG - chr1_4:54736338-54736357 None:intergenic 60.0%
!! CGAAGGTGCCCTACCATTCG+AGG + chr1_4:54737140-54737159 Msa0170570:intron 60.0%
GGTGCCCTACCATTCGAGGA+AGG + chr1_4:54737144-54737163 Msa0170570:intron 60.0%
ACCCCGAGGTTAGAGGCTGT+TGG + chr1_4:54739385-54739404 Msa0170570:CDS 60.0%
AGGGCAGTAGCCGACGCTTT+GGG + chr1_4:54739558-54739577 Msa0170570:CDS 60.0%
! GGATGCTTGCTGCATGGAGG+AGG + chr1_4:54739908-54739927 Msa0170570:CDS 60.0%
GCTGCATGGAGGAGGTAGAC+TGG + chr1_4:54739916-54739935 Msa0170570:CDS 60.0%
!! CGATGGTGGTGGCTCGGAAG+CGG - chr1_4:54736332-54736351 None:intergenic 65.0%
GAGGGCAGTAGCCGACGCTT+TGG + chr1_4:54739557-54739576 Msa0170570:CDS 65.0%
!! TCGGAAGCGGTGGTGGGGGT+GGG - chr1_4:54736319-54736338 None:intergenic 70.0%
! TGGCTCGGAAGCGGTGGTGG+GGG - chr1_4:54736323-54736342 None:intergenic 70.0%
! GTGGCTCGGAAGCGGTGGTG+GGG - chr1_4:54736324-54736343 None:intergenic 70.0%
! GGTGGCTCGGAAGCGGTGGT+GGG - chr1_4:54736325-54736344 None:intergenic 70.0%
! TGGTGGCTCGGAAGCGGTGG+TGG - chr1_4:54736326-54736345 None:intergenic 70.0%
!! TGGTGGTGGCTCGGAAGCGG+TGG - chr1_4:54736329-54736348 None:intergenic 70.0%
!! AAGCGGTGGTGGGGGTGGGG+CGG - chr1_4:54736315-54736334 None:intergenic 75.0%
!! CGGAAGCGGTGGTGGGGGTG+GGG - chr1_4:54736318-54736337 None:intergenic 75.0%
!! CTCGGAAGCGGTGGTGGGGG+TGG - chr1_4:54736320-54736339 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 54732270 54740121 54732270 ID=Msa0170570;Name=Msa0170570
chr1_4 mRNA 54732270 54740121 54732270 ID=Msa0170570-mRNA-1;Parent=Msa0170570;Name=Msa0170570-mRNA-1;_AED=0.12;_eAED=0.16;_QI=0|0|0|0.66|1|1|3|0|725
chr1_4 exon 54732270 54732276 54732270 ID=Msa0170570-mRNA-1:exon:16363;Parent=Msa0170570-mRNA-1
chr1_4 exon 54732768 54732831 54732768 ID=Msa0170570-mRNA-1:exon:16364;Parent=Msa0170570-mRNA-1
chr1_4 exon 54738015 54740121 54738015 ID=Msa0170570-mRNA-1:exon:16365;Parent=Msa0170570-mRNA-1
chr1_4 CDS 54732270 54732276 54732270 ID=Msa0170570-mRNA-1:cds;Parent=Msa0170570-mRNA-1
chr1_4 CDS 54732768 54732831 54732768 ID=Msa0170570-mRNA-1:cds;Parent=Msa0170570-mRNA-1
chr1_4 CDS 54738015 54740121 54738015 ID=Msa0170570-mRNA-1:cds;Parent=Msa0170570-mRNA-1
Gene Sequence

>Msa0170570

ATGAGTGCCTTGGCAAATTCTCATGAGAACAAGCAACAACCACTGAACGCGGAAGACATAAGCTACAAAAGAGGGGCACAGAACGAAGATGAAGACTCCGAGCAAGAAAACAAAAGAACTGAAGAAGACGAGGGTGAAACCAATGGAGGTGATCCATATATGTCCGAAAGCAATGTAGCTGATCTGCCTTTGACCAAAAGCAATAAAAGTGAAGATGGCGAGCAAGGCAAAAAGAAAAAGAAAAAGAAGAAGAAACTGAGTGAAGAAAGCAATCATAAGAAGTATAATGAGTTCAAAAGCAATGAATGTGAAGATGATGACCACGGAAAGAAGATGAAAAAGAAGCGGAAGCTAGTTGAAGGAAACACACTTGAGGAGGGTAACAACTTTAGAAGCAATGAAGGTGATAATGGCGAGCAGGGAAAGAAGAAAAAGAAAAAGGAAAAATTGAGTGAGAAAAGCAAACATAAGGAGTATAACGAGTTCAAAAGTAACAAATGTGAAGCTGACAACCAAGGAAAGAAGATGAAAAAGAAGCTAATTGAAGGAAGCACACTGAAGGAATGTAACGACTTTAGAAGCAATGATGATGAAGATGGTGAGCGAGAGAAAAAGATGAAGAAAAAGAAGAAACCAAGTGAAGAAGGCACACATAAGGAGTATAGTGAGTTCAAAAGCAATGATTGTGAAGATGACCAAGGAAAAAAGACGAAAAAGAAGCAGAAATTAATTGAAGGAAACACACTTAATGAGTGTAATGACTTTAGAAGCAATGGAGGTGAAGAGGGTGAGCAAGACAAGAAGATGAAGAAAAAGAAGAAGAAACTAAGTGAAGAAAGTAAACATAAGGAGTATAGCAAGTTTGAACCAAATGAATGTGAAGATGATGATGGCCAAGGAAAGAAAATGAAGAAGAAGAAGAAGAAGAAACTAATTGAGGAAGCCAAACTTAAGGAGTATAGTGACATTATAAGCAATGAAGGTGATGCTGATACTTGTTTCTCTGTCACTGAAGTTAATGATGAAGGCAAAAAGATGAAGAAAAAAAAGAAAGCAAAGATAGTTACAAGCGAGTCTCCTAACTGTGCACGTAATGAAACTCCTGGCAATGAAGGTGATGCTGATGCTTGTTTCTCCGTCAGTGAAGTTAATGATCAAGGCAAAAAGATGAAGAAAAAAAAGAAAGCAAAGACAGTAACAAGCGAGTCTCCTAACTGTGCACATAATGAAACTCCTAACTCTGCACATAATGGAACATCTAAACGCAAACAAGTAACTTGGGCTGATGAGGTGGAGGAGAAGTTATGTTGTGACGGCTTATTGCGTGGGAAAAGGTATACACCCGAAGAAGATGAGAAGATCAAAGCAGCTGTTTTGGAGTATATAGATTCTCATGGTTTGGGAGACGAAGGTCTTGATATGGTTCTAAATGTCAAATTACACCCCGAGGTTAGAGGCTGTTGGAAAGAAATCGCAAAAAGCATACCTGAGAGGCCTCATTACAGTGTGTATAACCGTGCTCATGCTTTGTTAGAAAGGGAGGGGAGGTGTAAGTGGACACCTGAAGAGCTGGAATTTATTGAAAAGACCTACGAGCAACATGGATCTAGTTGGAGGGCAGTAGCCGACGCTTTGGGTAAAAGTCGAGATCAGGTAAAAGATGCATGGCGCCGATTAAAATATACCAAAACAAAAAAAGGACATTGGTCCCAAGAGGAGTATCAAAATTTGTTTAACTTAGTAAACCTAGATCTGCTCGAGAGGGCTAAAGAGCCTTATAAAAAATCACAACATGGTATGTTGCGAGATAATATTTGTTGGGAGGCAATTGGTCACAAATTGGAGACTCGAAACAGTGCATTTTGCTGCAAGAAGTGGTACGAGCAATTAACATCAGCATTGGTTGCTAGTGGTGATTGGTGTGATACCGATGACTTCCGCTTGATAAACGCTTTATATGCTTTGGATGCTTGCTGCATGGAGGAGGTAGACTGGGACAATCTACTTGAGCATAGGTCTGGTGATGTATGCAGGAAACGATGGGAACAAATGATCCACCATATTGGGGAGCATGCAGCCAAGTCATTCATTGAGCAGGTGGAAGTTCTGGCAAAGAGATTCTGCCCTAACCTGTTGAAAGATAGAGAGGCCTTTGACAACAAACCTGTGATTTGTTGA

Protein sequence

>Msa0170570

MSALANSHENKQQPLNAEDISYKRGAQNEDEDSEQENKRTEEDEGETNGGDPYMSESNVADLPLTKSNKSEDGEQGKKKKKKKKKLSEESNHKKYNEFKSNECEDDDHGKKMKKKRKLVEGNTLEEGNNFRSNEGDNGEQGKKKKKKEKLSEKSKHKEYNEFKSNKCEADNQGKKMKKKLIEGSTLKECNDFRSNDDEDGEREKKMKKKKKPSEEGTHKEYSEFKSNDCEDDQGKKTKKKQKLIEGNTLNECNDFRSNGGEEGEQDKKMKKKKKKLSEESKHKEYSKFEPNECEDDDGQGKKMKKKKKKKLIEEAKLKEYSDIISNEGDADTCFSVTEVNDEGKKMKKKKKAKIVTSESPNCARNETPGNEGDADACFSVSEVNDQGKKMKKKKKAKTVTSESPNCAHNETPNSAHNGTSKRKQVTWADEVEEKLCCDGLLRGKRYTPEEDEKIKAAVLEYIDSHGLGDEGLDMVLNVKLHPEVRGCWKEIAKSIPERPHYSVYNRAHALLEREGRCKWTPEELEFIEKTYEQHGSSWRAVADALGKSRDQVKDAWRRLKYTKTKKGHWSQEEYQNLFNLVNLDLLERAKEPYKKSQHGMLRDNICWEAIGHKLETRNSAFCCKKWYEQLTSALVASGDWCDTDDFRLINALYALDACCMEEVDWDNLLEHRSGDVCRKRWEQMIHHIGEHAAKSFIEQVEVLAKRFCPNLLKDREAFDNKPVIC*