Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453250 | G7I3M7 | 96.774 | 93 | 3 | 0 | 1 | 93 | 1 | 93 | 4.51e-60 | 187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007080 | Msa1453250 | 0.833748 | 4.462783e-56 | -8.615850e-47 |
| Msa0007280 | Msa1453250 | 0.805074 | 1.590730e-49 | -8.615850e-47 |
| Msa0011500 | Msa1453250 | 0.809029 | 2.315654e-50 | -8.615850e-47 |
| Msa0012060 | Msa1453250 | 0.813986 | 1.938298e-51 | -8.615850e-47 |
| Msa0017510 | Msa1453250 | 0.808536 | 2.951703e-50 | -8.615850e-47 |
| Msa0026440 | Msa1453250 | 0.866309 | 3.132485e-65 | -8.615850e-47 |
| Msa0026450 | Msa1453250 | 0.836355 | 9.821520e-57 | -8.615850e-47 |
| Msa0029910 | Msa1453250 | 0.802767 | 4.798545e-49 | -8.615850e-47 |
| Msa0036920 | Msa1453250 | 0.803461 | 3.448231e-49 | -8.615850e-47 |
| Msa0048000 | Msa1453250 | 0.813596 | 2.363258e-51 | -8.615850e-47 |
| Msa0054260 | Msa1453250 | 0.816506 | 5.339100e-52 | -8.615850e-47 |
| Msa0054310 | Msa1453250 | 0.820685 | 6.020192e-53 | -8.615850e-47 |
| Msa0055710 | Msa1453250 | 0.822350 | 2.483556e-53 | -8.615850e-47 |
| Msa0055720 | Msa1453250 | 0.806046 | 9.947910e-50 | -8.615850e-47 |
| Msa0055750 | Msa1453250 | 0.810773 | 9.754249e-51 | -8.615850e-47 |
| Msa0060400 | Msa1453250 | 0.803937 | 2.745986e-49 | -8.615850e-47 |
| Msa0075880 | Msa1453250 | 0.823916 | 1.070568e-53 | -8.615850e-47 |
| Msa0091210 | Msa1453250 | -0.804110 | 2.527512e-49 | -8.615850e-47 |
| Msa0100090 | Msa1453250 | 0.827778 | 1.296274e-54 | -8.615850e-47 |
| Msa0112750 | Msa1453250 | 0.819288 | 1.256506e-52 | -8.615850e-47 |
| Msa1357530 | Msa1453250 | 0.803517 | 3.357420e-49 | -8.615850e-47 |
| Msa1372760 | Msa1453250 | 0.804487 | 2.110412e-49 | -8.615850e-47 |
| Msa1376890 | Msa1453250 | 0.831816 | 1.347227e-55 | -8.615850e-47 |
| Msa1381940 | Msa1453250 | 0.803075 | 4.144827e-49 | -8.615850e-47 |
| Msa1384350 | Msa1453250 | 0.803072 | 4.149805e-49 | -8.615850e-47 |
| Msa1385000 | Msa1453250 | 0.801862 | 7.369914e-49 | -8.615850e-47 |
| Msa1390050 | Msa1453250 | 0.818246 | 2.166418e-52 | -8.615850e-47 |
| Msa1393410 | Msa1453250 | 0.814918 | 1.206018e-51 | -8.615850e-47 |
| Msa1401530 | Msa1453250 | 0.817405 | 3.354583e-52 | -8.615850e-47 |
| Msa1404540 | Msa1453250 | 0.803263 | 3.789201e-49 | -8.615850e-47 |
| Msa1410210 | Msa1453250 | 0.821986 | 3.016240e-53 | -8.615850e-47 |
| Msa1414740 | Msa1453250 | 0.800323 | 1.521370e-48 | -8.615850e-47 |
| Msa1424680 | Msa1453250 | 0.833890 | 4.111282e-56 | -8.615850e-47 |
| Msa1430680 | Msa1453250 | 0.803239 | 3.832419e-49 | -8.615850e-47 |
| Msa1435420 | Msa1453250 | 0.812993 | 3.204429e-51 | -8.615850e-47 |
| Msa1438250 | Msa1453250 | 0.800200 | 1.611174e-48 | -8.615850e-47 |
| Msa1438970 | Msa1453250 | 0.815493 | 8.989437e-52 | -8.615850e-47 |
| Msa1440940 | Msa1453250 | 0.803609 | 3.212312e-49 | -8.615850e-47 |
| Msa1451620 | Msa1453250 | -0.804240 | 2.375087e-49 | -8.615850e-47 |
| Msa1453250 | Msa1457430 | 0.814374 | 1.591375e-51 | -8.615850e-47 |
| Msa1453250 | Msa1463670 | 0.819898 | 9.121090e-53 | -8.615850e-47 |
| Msa1453250 | Msa1466540 | 0.813878 | 2.047491e-51 | -8.615850e-47 |
| Msa0607540 | Msa1453250 | 0.808588 | 2.877628e-50 | -8.615850e-47 |
| Msa0608620 | Msa1453250 | 0.823149 | 1.617773e-53 | -8.615850e-47 |
| Msa0620790 | Msa1453250 | 0.814934 | 1.196051e-51 | -8.615850e-47 |
| Msa0626280 | Msa1453250 | 0.842268 | 2.868549e-58 | -8.615850e-47 |
| Msa0648880 | Msa1453250 | 0.803740 | 3.018171e-49 | -8.615850e-47 |
| Msa0654010 | Msa1453250 | 0.803279 | 3.761488e-49 | -8.615850e-47 |
| Msa0657610 | Msa1453250 | 0.827662 | 1.382143e-54 | -8.615850e-47 |
| Msa0657970 | Msa1453250 | 0.813059 | 3.100514e-51 | -8.615850e-47 |
| Msa0658570 | Msa1453250 | 0.834348 | 3.156559e-56 | -8.615850e-47 |
| Msa0662340 | Msa1453250 | 0.801203 | 1.005708e-48 | -8.615850e-47 |
| Msa0664850 | Msa1453250 | 0.813391 | 2.621028e-51 | -8.615850e-47 |
| Msa0669440 | Msa1453250 | 0.819749 | 9.863609e-53 | -8.615850e-47 |
| Msa0672690 | Msa1453250 | 0.806558 | 7.760228e-50 | -8.615850e-47 |
| Msa0682550 | Msa1453250 | 0.830866 | 2.306719e-55 | -8.615850e-47 |
| Msa0688070 | Msa1453250 | 0.802381 | 5.765194e-49 | -8.615850e-47 |
| Msa0690440 | Msa1453250 | 0.800762 | 1.237654e-48 | -8.615850e-47 |
| Msa0693380 | Msa1453250 | 0.837139 | 6.198145e-57 | -8.615850e-47 |
| Msa0696740 | Msa1453250 | 0.810239 | 1.272143e-50 | -8.615850e-47 |
| Msa0696770 | Msa1453250 | 0.801544 | 8.565154e-49 | -8.615850e-47 |
| Msa0703490 | Msa1453250 | 0.819761 | 9.799441e-53 | -8.615850e-47 |
| Msa0704920 | Msa1453250 | 0.804029 | 2.628586e-49 | -8.615850e-47 |
| Msa0722720 | Msa1453250 | 0.802789 | 4.748944e-49 | -8.615850e-47 |
| Msa0723990 | Msa1453250 | 0.814211 | 1.729585e-51 | -8.615850e-47 |
| Msa0724210 | Msa1453250 | 0.806300 | 8.793856e-50 | -8.615850e-47 |
| Msa0727710 | Msa1453250 | 0.826188 | 3.111899e-54 | -8.615850e-47 |
| Msa0732840 | Msa1453250 | 0.825003 | 5.938753e-54 | -8.615850e-47 |
| Msa0764570 | Msa1453250 | 0.814699 | 1.348620e-51 | -8.615850e-47 |
| Msa0766630 | Msa1453250 | 0.839084 | 1.957479e-57 | -8.615850e-47 |
| Msa0773840 | Msa1453250 | 0.804100 | 2.539988e-49 | -8.615850e-47 |
| Msa0802470 | Msa1453250 | -0.810387 | 1.182467e-50 | -8.615850e-47 |
| Msa0807030 | Msa1453250 | 0.804674 | 1.928985e-49 | -8.615850e-47 |
| Msa0818160 | Msa1453250 | 0.822916 | 1.833994e-53 | -8.615850e-47 |
| Msa0824660 | Msa1453250 | 0.821666 | 3.577164e-53 | -8.615850e-47 |
| Msa0829620 | Msa1453250 | 0.805458 | 1.322092e-49 | -8.615850e-47 |
| Msa0140860 | Msa1453250 | 0.803323 | 3.681898e-49 | -8.615850e-47 |
| Msa0141230 | Msa1453250 | 0.802737 | 4.867878e-49 | -8.615850e-47 |
| Msa0141250 | Msa1453250 | 0.800005 | 1.765197e-48 | -8.615850e-47 |
| Msa0142200 | Msa1453250 | 0.804518 | 2.078863e-49 | -8.615850e-47 |
| Msa0145250 | Msa1453250 | 0.839915 | 1.190863e-57 | -8.615850e-47 |
| Msa0145260 | Msa1453250 | 0.841814 | 3.780917e-58 | -8.615850e-47 |
| Msa0145310 | Msa1453250 | 0.817147 | 3.834223e-52 | -8.615850e-47 |
| Msa0148720 | Msa1453250 | 0.818719 | 1.692971e-52 | -8.615850e-47 |
| Msa0157290 | Msa1453250 | 0.808308 | 3.301244e-50 | -8.615850e-47 |
| Msa0165510 | Msa1453250 | 0.995874 | 7.643338e-221 | -8.615850e-47 |
| Msa0165520 | Msa1453250 | 0.839112 | 1.925291e-57 | -8.615850e-47 |
| Msa0165550 | Msa1453250 | 0.800958 | 1.129057e-48 | -8.615850e-47 |
| Msa0169860 | Msa1453250 | 0.802795 | 4.735332e-49 | -8.615850e-47 |
| Msa0170090 | Msa1453250 | 0.800063 | 1.718120e-48 | -8.615850e-47 |
| Msa0173990 | Msa1453250 | 0.834302 | 3.241551e-56 | -8.615850e-47 |
| Msa0191250 | Msa1453250 | 0.818789 | 1.631748e-52 | -8.615850e-47 |
| Msa0197660 | Msa1453250 | 0.810523 | 1.104776e-50 | -8.615850e-47 |
| Msa0212040 | Msa1453250 | 0.813143 | 2.971788e-51 | -8.615850e-47 |
| Msa0212310 | Msa1453250 | 0.817999 | 2.463619e-52 | -8.615850e-47 |
| Msa0213040 | Msa1453250 | 0.806286 | 8.857393e-50 | -8.615850e-47 |
| Msa0213520 | Msa1453250 | 0.807742 | 4.356679e-50 | -8.615850e-47 |
| Msa0214300 | Msa1453250 | 0.816250 | 6.092852e-52 | -8.615850e-47 |
| Msa0220580 | Msa1453250 | 0.824409 | 8.200951e-54 | -8.615850e-47 |
| Msa0220740 | Msa1453250 | 0.838057 | 3.605836e-57 | -8.615850e-47 |
| Msa0223410 | Msa1453250 | -0.813417 | 2.587525e-51 | -8.615850e-47 |
| Msa0227470 | Msa1453250 | 0.812619 | 3.870858e-51 | -8.615850e-47 |
| Msa1229600 | Msa1453250 | 0.806056 | 9.899831e-50 | -8.615850e-47 |
| Msa1233500 | Msa1453250 | 0.802855 | 4.600930e-49 | -8.615850e-47 |
| Msa1242220 | Msa1453250 | 0.804989 | 1.657607e-49 | -8.615850e-47 |
| Msa1249490 | Msa1453250 | 0.810634 | 1.045805e-50 | -8.615850e-47 |
| Msa1267060 | Msa1453250 | 0.814023 | 1.902700e-51 | -8.615850e-47 |
| Msa1278840 | Msa1453250 | 0.834531 | 2.839572e-56 | -8.615850e-47 |
| Msa1283860 | Msa1453250 | 0.804563 | 2.034384e-49 | -8.615850e-47 |
| Msa1284680 | Msa1453250 | 0.803025 | 4.245279e-49 | -8.615850e-47 |
| Msa1289280 | Msa1453250 | 0.800480 | 1.412967e-48 | -8.615850e-47 |
| Msa1297290 | Msa1453250 | 0.801145 | 1.033686e-48 | -8.615850e-47 |
| Msa1298260 | Msa1453250 | 0.821297 | 4.352592e-53 | -8.615850e-47 |
| Msa1299070 | Msa1453250 | 0.805581 | 1.246033e-49 | -8.615850e-47 |
| Msa1305190 | Msa1453250 | 0.811587 | 6.496670e-51 | -8.615850e-47 |
| Msa1305340 | Msa1453250 | 0.806106 | 9.665349e-50 | -8.615850e-47 |
| Msa1306850 | Msa1453250 | 0.823040 | 1.716004e-53 | -8.615850e-47 |
| Msa1316980 | Msa1453250 | 0.811755 | 5.972519e-51 | -8.615850e-47 |
| Msa1320620 | Msa1453250 | 0.800326 | 1.518637e-48 | -8.615850e-47 |
| Msa1322890 | Msa1453250 | 0.820254 | 7.559673e-53 | -8.615850e-47 |
| Msa1331000 | Msa1453250 | 0.801755 | 7.750468e-49 | -8.615850e-47 |
| Msa1333410 | Msa1453250 | 0.808405 | 3.147398e-50 | -8.615850e-47 |
| Msa1336490 | Msa1453250 | 0.804031 | 2.625599e-49 | -8.615850e-47 |
| Msa1340270 | Msa1453250 | 0.823679 | 1.216574e-53 | -8.615850e-47 |
| Msa1344130 | Msa1453250 | 0.805907 | 1.064252e-49 | -8.615850e-47 |
| Msa0365780 | Msa1453250 | 0.802940 | 4.419973e-49 | -8.615850e-47 |
| Msa0373930 | Msa1453250 | 0.805040 | 1.617541e-49 | -8.615850e-47 |
| Msa0388960 | Msa1453250 | 0.802967 | 4.363334e-49 | -8.615850e-47 |
| Msa0392040 | Msa1453250 | -0.807333 | 5.321158e-50 | -8.615850e-47 |
| Msa0399300 | Msa1453250 | 0.823948 | 1.052313e-53 | -8.615850e-47 |
| Msa0407780 | Msa1453250 | 0.801259 | 9.796329e-49 | -8.615850e-47 |
| Msa0414230 | Msa1453250 | 0.812286 | 4.575202e-51 | -8.615850e-47 |
| Msa0433410 | Msa1453250 | -0.829124 | 6.135252e-55 | -8.615850e-47 |
| Msa0437560 | Msa1453250 | 0.820040 | 8.462572e-53 | -8.615850e-47 |
| Msa0443290 | Msa1453250 | 0.803469 | 3.434020e-49 | -8.615850e-47 |
| Msa0445280 | Msa1453250 | 0.825363 | 4.883797e-54 | -8.615850e-47 |
| Msa0452920 | Msa1453250 | 0.811300 | 7.501232e-51 | -8.615850e-47 |
| Msa0458440 | Msa1453250 | 0.821448 | 4.016272e-53 | -8.615850e-47 |
| Msa0469940 | Msa1453250 | -0.814426 | 1.550359e-51 | -8.615850e-47 |
| Msa1007030 | Msa1453250 | 0.804674 | 1.928956e-49 | -8.615850e-47 |
| Msa1014540 | Msa1453250 | 0.815386 | 9.493285e-52 | -8.615850e-47 |
| Msa1027290 | Msa1453250 | 0.810665 | 1.029402e-50 | -8.615850e-47 |
| Msa1030970 | Msa1453250 | 0.808877 | 2.495402e-50 | -8.615850e-47 |
| Msa1031930 | Msa1453250 | 0.814696 | 1.350531e-51 | -8.615850e-47 |
| Msa1041730 | Msa1453250 | 0.820346 | 7.199237e-53 | -8.615850e-47 |
| Msa1043830 | Msa1453250 | 0.871708 | 5.563119e-67 | -8.615850e-47 |
| Msa1043920 | Msa1453250 | 0.809850 | 1.543062e-50 | -8.615850e-47 |
| Msa1068200 | Msa1453250 | -0.802452 | 5.571899e-49 | -8.615850e-47 |
| Msa1073070 | Msa1453250 | -0.810096 | 1.366205e-50 | -8.615850e-47 |
| Msa1075220 | Msa1453250 | -0.808329 | 3.267091e-50 | -8.615850e-47 |
| Msa1080160 | Msa1453250 | 0.820995 | 5.107107e-53 | -8.615850e-47 |
| Msa1082500 | Msa1453250 | 0.855152 | 7.643418e-62 | -8.615850e-47 |
| Msa1089040 | Msa1453250 | 0.815779 | 7.762065e-52 | -8.615850e-47 |
| Msa1090260 | Msa1453250 | 0.801495 | 8.765780e-49 | -8.615850e-47 |
| Msa0239800 | Msa1453250 | 0.811332 | 7.380483e-51 | -8.615850e-47 |
| Msa0245880 | Msa1453250 | 0.802144 | 6.448869e-49 | -8.615850e-47 |
| Msa0260810 | Msa1453250 | 0.814826 | 1.264351e-51 | -8.615850e-47 |
| Msa0265380 | Msa1453250 | 0.810222 | 1.283089e-50 | -8.615850e-47 |
| Msa0276920 | Msa1453250 | 0.801354 | 9.366850e-49 | -8.615850e-47 |
| Msa0282590 | Msa1453250 | 0.801697 | 7.968342e-49 | -8.615850e-47 |
| Msa0285450 | Msa1453250 | 0.823245 | 1.536539e-53 | -8.615850e-47 |
| Msa0288100 | Msa1453250 | 0.800720 | 1.262744e-48 | -8.615850e-47 |
| Msa0297960 | Msa1453250 | 0.823527 | 1.320007e-53 | -8.615850e-47 |
| Msa0306210 | Msa1453250 | -0.833769 | 4.408073e-56 | -8.615850e-47 |
| Msa0317510 | Msa1453250 | 0.814670 | 1.368874e-51 | -8.615850e-47 |
| Msa0317730 | Msa1453250 | 0.803037 | 4.220566e-49 | -8.615850e-47 |
| Msa0326520 | Msa1453250 | 0.808646 | 2.796247e-50 | -8.615850e-47 |
| Msa0331000 | Msa1453250 | 0.801771 | 7.694444e-49 | -8.615850e-47 |
| Msa0338110 | Msa1453250 | 0.806283 | 8.869537e-50 | -8.615850e-47 |
| Msa0340450 | Msa1453250 | 0.827546 | 1.473691e-54 | -8.615850e-47 |
| Msa0344690 | Msa1453250 | -0.814915 | 1.208069e-51 | -8.615850e-47 |
| Msa0345970 | Msa1453250 | 0.800109 | 1.681659e-48 | -8.615850e-47 |
| Msa1122520 | Msa1453250 | 0.818028 | 2.426513e-52 | -8.615850e-47 |
| Msa1124540 | Msa1453250 | -0.810317 | 1.223846e-50 | -8.615850e-47 |
| Msa1125080 | Msa1453250 | 0.817051 | 4.029838e-52 | -8.615850e-47 |
| Msa1130270 | Msa1453250 | -0.800189 | 1.619414e-48 | -8.615850e-47 |
| Msa1131220 | Msa1453250 | 0.807701 | 4.444538e-50 | -8.615850e-47 |
| Msa1144720 | Msa1453250 | -0.806956 | 6.394116e-50 | -8.615850e-47 |
| Msa1158310 | Msa1453250 | 0.801659 | 8.110147e-49 | -8.615850e-47 |
| Msa1162550 | Msa1453250 | -0.814237 | 1.706902e-51 | -8.615850e-47 |
| Msa1167220 | Msa1453250 | 0.821420 | 4.076386e-53 | -8.615850e-47 |
| Msa1179120 | Msa1453250 | 0.814203 | 1.736348e-51 | -8.615850e-47 |
| Msa1185980 | Msa1453250 | 0.808824 | 2.561860e-50 | -8.615850e-47 |
| Msa1216890 | Msa1453250 | 0.800235 | 1.584944e-48 | -8.615850e-47 |
| Msa1224480 | Msa1453250 | 0.801852 | 7.404792e-49 | -8.615850e-47 |
| Msa0483650 | Msa1453250 | 0.800692 | 1.279341e-48 | -8.615850e-47 |
| Msa0484780 | Msa1453250 | 0.861300 | 1.130199e-63 | -8.615850e-47 |
| Msa0490870 | Msa1453250 | 0.808508 | 2.992007e-50 | -8.615850e-47 |
| Msa0512870 | Msa1453250 | 0.803712 | 3.058233e-49 | -8.615850e-47 |
| Msa0512900 | Msa1453250 | 0.832997 | 6.868501e-56 | -8.615850e-47 |
| Msa0520700 | Msa1453250 | 0.833296 | 5.787502e-56 | -8.615850e-47 |
| Msa0532350 | Msa1453250 | 0.807165 | 5.774426e-50 | -8.615850e-47 |
| Msa0553460 | Msa1453250 | 0.804327 | 2.278460e-49 | -8.615850e-47 |
| Msa0555020 | Msa1453250 | 0.824794 | 6.653310e-54 | -8.615850e-47 |
| Msa0558690 | Msa1453250 | 0.831316 | 1.788378e-55 | -8.615850e-47 |
| Msa0559190 | Msa1453250 | 0.804104 | 2.535050e-49 | -8.615850e-47 |
| Msa0567020 | Msa1453250 | 0.821859 | 3.226458e-53 | -8.615850e-47 |
| Msa0585230 | Msa1453250 | 0.802993 | 4.309758e-49 | -8.615850e-47 |
| Msa0586910 | Msa1453250 | 0.806710 | 7.208104e-50 | -8.615850e-47 |
| Msa0842650 | Msa1453250 | 0.800181 | 1.625346e-48 | -8.615850e-47 |
| Msa0844240 | Msa1453250 | 0.800572 | 1.353444e-48 | -8.615850e-47 |
| Msa0844900 | Msa1453250 | 0.820861 | 5.483500e-53 | -8.615850e-47 |
| Msa0863930 | Msa1453250 | 0.823916 | 1.070690e-53 | -8.615850e-47 |
| Msa0867890 | Msa1453250 | 0.819385 | 1.193888e-52 | -8.615850e-47 |
| Msa0868020 | Msa1453250 | 0.808446 | 3.085211e-50 | -8.615850e-47 |
| Msa0870530 | Msa1453250 | 0.821171 | 4.653061e-53 | -8.615850e-47 |
| Msa0880140 | Msa1453250 | 0.808911 | 2.454401e-50 | -8.615850e-47 |
| Msa0886330 | Msa1453250 | -0.811962 | 5.384392e-51 | -8.615850e-47 |
| Msa0907070 | Msa1453250 | 0.810040 | 1.404442e-50 | -8.615850e-47 |
| Msa0909120 | Msa1453250 | 0.812325 | 4.487852e-51 | -8.615850e-47 |
| Msa0913480 | Msa1453250 | -0.819452 | 1.153048e-52 | -8.615850e-47 |
| Msa0922410 | Msa1453250 | 0.815834 | 7.545502e-52 | -8.615850e-47 |
| Msa0924310 | Msa1453250 | 0.801146 | 1.033038e-48 | -8.615850e-47 |
| Msa0926890 | Msa1453250 | 0.811342 | 7.346901e-51 | -8.615850e-47 |
| Msa0935910 | Msa1453250 | 0.822140 | 2.777601e-53 | -8.615850e-47 |
| Msa0936210 | Msa1453250 | 0.815450 | 9.188359e-52 | -8.615850e-47 |
| Msa0949790 | Msa1453250 | 0.814011 | 1.914180e-51 | -8.615850e-47 |
| Msa0968420 | Msa1453250 | 0.801616 | 8.277441e-49 | -8.615850e-47 |
| Msa0969450 | Msa1453250 | 0.809732 | 1.635957e-50 | -8.615850e-47 |
| Msa0969520 | Msa1453250 | 0.802148 | 6.437954e-49 | -8.615850e-47 |
| Msa0975220 | Msa1453250 | 0.807693 | 4.461430e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453250 | MtrunA17_Chr1g0153611 | 96.774 | 93 | 3 | 0 | 1 | 93 | 1 | 93 | 8.68e-64 | 187 |
| Msa1453250 | MtrunA17_Chr1g0153581 | 68.085 | 94 | 29 | 1 | 1 | 93 | 1 | 94 | 3.99e-40 | 127 |
| Msa1453250 | MtrunA17_Chr1g0153561 | 67.021 | 94 | 30 | 1 | 1 | 93 | 1 | 94 | 1.27e-39 | 126 |
| Msa1453250 | MtrunA17_Chr1g0153601 | 65.957 | 94 | 31 | 1 | 1 | 93 | 1 | 94 | 1.02e-38 | 124 |
| Msa1453250 | MtrunA17_Chr1g0153551 | 46.667 | 90 | 46 | 2 | 1 | 88 | 5 | 94 | 1.14e-20 | 79.0 |
| Msa1453250 | MtrunA17_Chr1g0153541 | 42.391 | 92 | 48 | 2 | 1 | 87 | 5 | 96 | 1.57e-17 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTGTCTTCTTTCTATC+AGG | 0.222096 | tig0034550:-1344 | None:intergenic |
| TATCTTCTTGTCAAAGGGTT+TGG | 0.309945 | tig0034550:+1581 | Msa1453250:CDS |
| GATTTACGTTCCTATGTTCC+TGG | 0.332407 | tig0034550:+1473 | Msa1453250:CDS |
| CAAAGCAGAAAGGAAAATAA+TGG | 0.385640 | tig0034550:+1379 | Msa1453250:CDS |
| ACTAATTTGTCCATCATTGT+TGG | 0.414841 | tig0034550:-1531 | None:intergenic |
| TTTCTATCAGGGCGTAGTAT+AGG | 0.421580 | tig0034550:-1332 | None:intergenic |
| AAGGAAAATAATGGAAGTAT+TGG | 0.434553 | tig0034550:+1388 | Msa1453250:CDS |
| TTGATTATCTTCTTGTCAAA+GGG | 0.453582 | tig0034550:+1576 | Msa1453250:CDS |
| GTTGATTATCTTCTTGTCAA+AGG | 0.460253 | tig0034550:+1575 | Msa1453250:CDS |
| AATATTGATGCCAACAATGA+TGG | 0.465249 | tig0034550:+1521 | Msa1453250:CDS |
| CAACGCATGGCTCTCCATCC+AGG | 0.488249 | tig0034550:-1491 | None:intergenic |
| TACGTTCCTATGTTCCTGGA+TGG | 0.524072 | tig0034550:+1477 | Msa1453250:CDS |
| AAATTGTCTTCTTTCTATCA+GGG | 0.524225 | tig0034550:-1343 | None:intergenic |
| ATGGAGAGCCATGCGTTGTA+TGG | 0.529428 | tig0034550:+1496 | Msa1453250:CDS |
| AACAATGATGGACAAATTAG+TGG | 0.554056 | tig0034550:+1533 | Msa1453250:CDS |
| AAGATCAAATCAAAGCAGAA+AGG | 0.570009 | tig0034550:+1369 | Msa1453250:CDS |
| GGCTCTCCATCCAGGAACAT+AGG | 0.575847 | tig0034550:-1483 | None:intergenic |
| AATATTGACCATACAACGCA+TGG | 0.602870 | tig0034550:-1504 | None:intergenic |
| TGATGGACAAATTAGTGGTG+AGG | 0.626914 | tig0034550:+1538 | Msa1453250:CDS |
| AAAGCAGATAGCAATAAGGA+CGG | 0.681326 | tig0034550:+1413 | Msa1453250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATTGTCTTCTTTCTATCA+GGG | - | tig0034550:1346-1365 | None:intergenic | 25.0% |
| !! | AAGGAAAATAATGGAAGTAT+TGG | + | tig0034550:1388-1407 | Msa1453250:CDS | 25.0% |
| ! | TTGATTATCTTCTTGTCAAA+GGG | + | tig0034550:1576-1595 | Msa1453250:CDS | 25.0% |
| GAAATTGTCTTCTTTCTATC+AGG | - | tig0034550:1347-1366 | None:intergenic | 30.0% | |
| AAGATCAAATCAAAGCAGAA+AGG | + | tig0034550:1369-1388 | Msa1453250:CDS | 30.0% | |
| CAAAGCAGAAAGGAAAATAA+TGG | + | tig0034550:1379-1398 | Msa1453250:CDS | 30.0% | |
| AATATTGATGCCAACAATGA+TGG | + | tig0034550:1521-1540 | Msa1453250:CDS | 30.0% | |
| ! | ACTAATTTGTCCATCATTGT+TGG | - | tig0034550:1534-1553 | None:intergenic | 30.0% |
| !! | AACAATGATGGACAAATTAG+TGG | + | tig0034550:1533-1552 | Msa1453250:CDS | 30.0% |
| GTTGATTATCTTCTTGTCAA+AGG | + | tig0034550:1575-1594 | Msa1453250:CDS | 30.0% | |
| GGAAAAAGCAGATAGCAATA+AGG | + | tig0034550:1409-1428 | Msa1453250:CDS | 35.0% | |
| AAAGCAGATAGCAATAAGGA+CGG | + | tig0034550:1413-1432 | Msa1453250:CDS | 35.0% | |
| AATATTGACCATACAACGCA+TGG | - | tig0034550:1507-1526 | None:intergenic | 35.0% | |
| TATCTTCTTGTCAAAGGGTT+TGG | + | tig0034550:1581-1600 | Msa1453250:CDS | 35.0% | |
| TTTCTATCAGGGCGTAGTAT+AGG | - | tig0034550:1335-1354 | None:intergenic | 40.0% | |
| GATTTACGTTCCTATGTTCC+TGG | + | tig0034550:1473-1492 | Msa1453250:CDS | 40.0% | |
| ! | TGATGGACAAATTAGTGGTG+AGG | + | tig0034550:1538-1557 | Msa1453250:CDS | 40.0% |
| TACGTTCCTATGTTCCTGGA+TGG | + | tig0034550:1477-1496 | Msa1453250:CDS | 45.0% | |
| ATGGAGAGCCATGCGTTGTA+TGG | + | tig0034550:1496-1515 | Msa1453250:CDS | 50.0% | |
| GGCTCTCCATCCAGGAACAT+AGG | - | tig0034550:1486-1505 | None:intergenic | 55.0% | |
| CAACGCATGGCTCTCCATCC+AGG | - | tig0034550:1494-1513 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034550 | gene | 1329 | 1610 | 1329 | ID=Msa1453250;Name=Msa1453250 |
| tig0034550 | mRNA | 1329 | 1610 | 1329 | ID=Msa1453250-mRNA-1;Parent=Msa1453250;Name=Msa1453250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|93 |
| tig0034550 | exon | 1329 | 1610 | 1329 | ID=Msa1453250-mRNA-1:exon:19062;Parent=Msa1453250-mRNA-1 |
| tig0034550 | CDS | 1329 | 1610 | 1329 | ID=Msa1453250-mRNA-1:cds;Parent=Msa1453250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
