Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184840 | XP_013444928.1 | 96.659 | 449 | 11 | 1 | 1 | 449 | 1 | 445 | 0.0 | 892 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184840 | sp|P45432|CSN1_ARATH | 74.889 | 450 | 103 | 4 | 1 | 449 | 1 | 441 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184840 | A0A072TQ51 | 96.659 | 449 | 11 | 1 | 1 | 449 | 1 | 445 | 0.0 | 892 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042550 | Msa1184840 | 0.807316 | 5.364129e-50 | -8.615850e-47 |
| Msa0058600 | Msa1184840 | 0.806107 | 9.660415e-50 | -8.615850e-47 |
| Msa0623070 | Msa1184840 | 0.805862 | 1.087386e-49 | -8.615850e-47 |
| Msa0715410 | Msa1184840 | 0.809479 | 1.854508e-50 | -8.615850e-47 |
| Msa0738030 | Msa1184840 | 0.809171 | 2.158882e-50 | -8.615850e-47 |
| Msa0749440 | Msa1184840 | 0.809207 | 2.120415e-50 | -8.615850e-47 |
| Msa0751850 | Msa1184840 | 0.808833 | 2.549794e-50 | -8.615850e-47 |
| Msa0766760 | Msa1184840 | 0.819189 | 1.323345e-52 | -8.615850e-47 |
| Msa0797250 | Msa1184840 | 0.834266 | 3.311281e-56 | -8.615850e-47 |
| Msa0797770 | Msa1184840 | 0.821991 | 3.007858e-53 | -8.615850e-47 |
| Msa0831850 | Msa1184840 | 0.823458 | 1.370160e-53 | -8.615850e-47 |
| Msa0832090 | Msa1184840 | 0.802318 | 5.938777e-49 | -8.615850e-47 |
| Msa0835230 | Msa1184840 | 0.817700 | 2.878482e-52 | -8.615850e-47 |
| Msa0138020 | Msa1184840 | 0.841298 | 5.171429e-58 | -8.615850e-47 |
| Msa0178510 | Msa1184840 | 0.809223 | 2.103801e-50 | -8.615850e-47 |
| Msa0197610 | Msa1184840 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
| Msa0204840 | Msa1184840 | 0.805828 | 1.105427e-49 | -8.615850e-47 |
| Msa0218370 | Msa1184840 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa0218470 | Msa1184840 | 0.811074 | 8.397449e-51 | -8.615850e-47 |
| Msa0218580 | Msa1184840 | 0.804659 | 1.942183e-49 | -8.615850e-47 |
| Msa0417330 | Msa1184840 | 0.821878 | 3.195270e-53 | -8.615850e-47 |
| Msa0455760 | Msa1184840 | 0.812987 | 3.214865e-51 | -8.615850e-47 |
| Msa0468320 | Msa1184840 | 0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0476680 | Msa1184840 | 0.804896 | 1.733162e-49 | -8.615850e-47 |
| Msa1014730 | Msa1184840 | 0.809040 | 2.303060e-50 | -8.615850e-47 |
| Msa1017350 | Msa1184840 | 0.820279 | 7.458672e-53 | -8.615850e-47 |
| Msa1063690 | Msa1184840 | 0.816766 | 4.669545e-52 | -8.615850e-47 |
| Msa1065010 | Msa1184840 | 0.803628 | 3.184254e-49 | -8.615850e-47 |
| Msa1076960 | Msa1184840 | 0.828568 | 8.364953e-55 | -8.615850e-47 |
| Msa1077340 | Msa1184840 | 0.807098 | 5.967283e-50 | -8.615850e-47 |
| Msa1088950 | Msa1184840 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa1103180 | Msa1184840 | 0.808458 | 3.066773e-50 | -8.615850e-47 |
| Msa1104560 | Msa1184840 | 0.807651 | 4.555575e-50 | -8.615850e-47 |
| Msa0241140 | Msa1184840 | 0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0290760 | Msa1184840 | 0.804216 | 2.402688e-49 | -8.615850e-47 |
| Msa0308460 | Msa1184840 | 0.830419 | 2.968035e-55 | -8.615850e-47 |
| Msa0358890 | Msa1184840 | 0.800373 | 1.485879e-48 | -8.615850e-47 |
| Msa0363790 | Msa1184840 | 0.805966 | 1.034361e-49 | -8.615850e-47 |
| Msa1122860 | Msa1184840 | 0.827972 | 1.164544e-54 | -8.615850e-47 |
| Msa1158390 | Msa1184840 | 0.801441 | 8.990195e-49 | -8.615850e-47 |
| Msa1184840 | Msa1184850 | 0.806758 | 7.041919e-50 | -8.615850e-47 |
| Msa1184840 | Msa1188180 | 0.805583 | 1.244799e-49 | -8.615850e-47 |
| Msa1184840 | Msa1207310 | 0.802565 | 5.281894e-49 | -8.615850e-47 |
| Msa1184840 | Msa1283740 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa1184840 | Msa1305350 | 0.817837 | 2.680297e-52 | -8.615850e-47 |
| Msa1184840 | Msa1355180 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa1184840 | Msa1355890 | 0.802759 | 4.817530e-49 | -8.615850e-47 |
| Msa1184840 | Msa1371940 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa1184840 | Msa1372150 | 0.804362 | 2.240479e-49 | -8.615850e-47 |
| Msa1184840 | Msa1407060 | 0.814269 | 1.678869e-51 | -8.615850e-47 |
| Msa0485490 | Msa1184840 | 0.811996 | 5.294194e-51 | -8.615850e-47 |
| Msa0518380 | Msa1184840 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0518440 | Msa1184840 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0521010 | Msa1184840 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0521670 | Msa1184840 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0532990 | Msa1184840 | 0.800484 | 1.410183e-48 | -8.615850e-47 |
| Msa0549910 | Msa1184840 | 0.806324 | 8.694857e-50 | -8.615850e-47 |
| Msa0559500 | Msa1184840 | 0.805864 | 1.086590e-49 | -8.615850e-47 |
| Msa0894710 | Msa1184840 | 0.807250 | 5.541109e-50 | -8.615850e-47 |
| Msa0936390 | Msa1184840 | 0.802634 | 5.110968e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184840 | MtrunA17_Chr8g0350361 | 96.659 | 449 | 11 | 1 | 1 | 449 | 1 | 445 | 0.0 | 892 |
| Msa1184840 | MtrunA17_Chr7g0246691 | 71.175 | 451 | 120 | 5 | 1 | 449 | 1 | 443 | 0.0 | 631 |
| Msa1184840 | MtrunA17_Chr6g0460061 | 38.363 | 391 | 161 | 9 | 41 | 357 | 159 | 543 | 1.58e-67 | 228 |
| Msa1184840 | MtrunA17_Chr6g0459841 | 38.442 | 385 | 159 | 9 | 41 | 357 | 211 | 585 | 2.20e-66 | 226 |
| Msa1184840 | MtrunA17_Chr4g0057951 | 23.053 | 321 | 230 | 8 | 106 | 420 | 62 | 371 | 1.74e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1184840 | AT3G61140.1 | 74.889 | 450 | 103 | 4 | 1 | 449 | 1 | 441 | 0.0 | 700 |
| Msa1184840 | AT4G24820.1 | 25.373 | 201 | 144 | 3 | 220 | 420 | 177 | 371 | 3.29e-14 | 74.3 |
| Msa1184840 | AT4G24820.2 | 25.373 | 201 | 144 | 3 | 220 | 420 | 177 | 371 | 3.29e-14 | 74.3 |
Find 137 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATGGGATACAATGATTT+TGG | 0.173359 | 8_1:-21005719 | Msa1184840:CDS |
| TTAAACATGACTTCAATATT+AGG | 0.175164 | 8_1:-21003670 | Msa1184840:CDS |
| GAGAGAATACGCAGTTGTTT+AGG | 0.234580 | 8_1:-21007535 | Msa1184840:CDS |
| CATCAAGGAAACTTTGATTA+TGG | 0.235732 | 8_1:-21003646 | Msa1184840:exon |
| AGCTGCAATTACTTCATTAT+AGG | 0.247402 | 8_1:+21005170 | None:intergenic |
| ATTTGATAGGGCAGAGTTAA+AGG | 0.247989 | 8_1:-21005106 | Msa1184840:CDS |
| CGTCTTCTGCGTCCATGAAT+TGG | 0.249373 | 8_1:+21007792 | None:intergenic |
| GAGGGGTATGAGATGGATTT+GGG | 0.259340 | 8_1:-21007479 | Msa1184840:CDS |
| CATGTGTTTGAGTACAATTC+TGG | 0.260439 | 8_1:-21005603 | Msa1184840:CDS |
| AAGAATATTTCCCTACCTTA+TGG | 0.265146 | 8_1:-21003560 | Msa1184840:three_prime_UTR |
| TGAGGGGTATGAGATGGATT+TGG | 0.292623 | 8_1:-21007480 | Msa1184840:CDS |
| TGGATTTGGGTTGGTGTGAT+GGG | 0.299034 | 8_1:-21007466 | Msa1184840:CDS |
| TAAACATGACTTCAATATTA+GGG | 0.299578 | 8_1:-21003669 | Msa1184840:CDS |
| GTGCACTTGCAACATTTGAT+AGG | 0.300346 | 8_1:-21005119 | Msa1184840:CDS |
| AGAGAATACGCAGTTGTTTA+GGG | 0.301080 | 8_1:-21007534 | Msa1184840:CDS |
| TTTCAAAGGGTTCTAGAAAC+TGG | 0.314327 | 8_1:-21003743 | Msa1184840:CDS |
| TGCGTCCATGAATTGGGATT+AGG | 0.316635 | 8_1:+21007799 | None:intergenic |
| TTATAGGTACTACCCAGTTC+TGG | 0.318469 | 8_1:+21005186 | None:intergenic |
| CATGAATTGGGATTAGGGTT+AGG | 0.323344 | 8_1:+21007805 | None:intergenic |
| TACTATTCTCATGGTCTACT+AGG | 0.328740 | 8_1:-21005689 | Msa1184840:CDS |
| GCGTCCATGAATTGGGATTA+GGG | 0.334554 | 8_1:+21007800 | None:intergenic |
| AGAATGAGCTTAATGCTTAT+AGG | 0.336138 | 8_1:-21007406 | Msa1184840:CDS |
| ATGGATTTGGGTTGGTGTGA+TGG | 0.340791 | 8_1:-21007467 | Msa1184840:CDS |
| GTGTAGATTTCGTCGATCAT+TGG | 0.344094 | 8_1:+21007758 | None:intergenic |
| CGTAGCTTGGAAATTATTAT+CGG | 0.348012 | 8_1:+21005503 | None:intergenic |
| TTTATCAGTTCCCTTACTTC+GGG | 0.364996 | 8_1:+21004941 | None:intergenic |
| TTTGAAAGGTGGCATTCCTT+TGG | 0.365954 | 8_1:+21003759 | None:intergenic |
| CCAGCGACAGATTTGATTTG+AGG | 0.367542 | 8_1:+21004242 | None:intergenic |
| GAATGAGCTTAATGCTTATA+GGG | 0.369021 | 8_1:-21007405 | Msa1184840:intron |
| GTCTTCTGCGTCCATGAATT+GGG | 0.375131 | 8_1:+21007793 | None:intergenic |
| CAGCCACTATGCTTCCTGTC+TGG | 0.383868 | 8_1:-21004278 | Msa1184840:CDS |
| TCTAGAAGCAGGCCCAGAAC+TGG | 0.386575 | 8_1:-21005199 | Msa1184840:CDS |
| ATGGGAGTGTATACTGGATA+AGG | 0.390701 | 8_1:+21004164 | None:intergenic |
| GCTCAAGATGTTGCAACATA+TGG | 0.403151 | 8_1:-21005150 | Msa1184840:CDS |
| AGTTATTGTATCACCATGAT+AGG | 0.404606 | 8_1:-21003367 | Msa1184840:three_prime_UTR |
| ACACAAATGGGAGTGTATAC+TGG | 0.406626 | 8_1:+21004158 | None:intergenic |
| ATGAATTGGGATTAGGGTTA+GGG | 0.411344 | 8_1:+21007806 | None:intergenic |
| GGGAGCTTTGACATAATTGT+TGG | 0.414061 | 8_1:-21003390 | Msa1184840:three_prime_UTR |
| GTCTGTTGATTTGACTATGA+TGG | 0.417545 | 8_1:-21004137 | Msa1184840:CDS |
| TAGAGTTGGTACCCGAAGTA+AGG | 0.420745 | 8_1:-21004952 | Msa1184840:CDS |
| GATTATGGATTGAAGACAAC+AGG | 0.421249 | 8_1:-21003631 | Msa1184840:three_prime_UTR |
| GTCAAATCAACAGACACAAA+TGG | 0.422839 | 8_1:+21004145 | None:intergenic |
| CTCTAAGAAATTGCGGAAGT+TGG | 0.423840 | 8_1:+21004970 | None:intergenic |
| GCATTCAAGACAACTGTTGT+TGG | 0.425392 | 8_1:-21004109 | Msa1184840:CDS |
| GATTGTGTTGAATCTGTTGA+TGG | 0.441744 | 8_1:+21007860 | None:intergenic |
| CTAACCCTAATCCCAATTCA+TGG | 0.444537 | 8_1:-21007804 | Msa1184840:exon |
| TTAATGCAGTTTCTAGAAGC+AGG | 0.445350 | 8_1:-21005210 | Msa1184840:intron |
| ATTTATCAGTTCCCTTACTT+CGG | 0.447966 | 8_1:+21004940 | None:intergenic |
| TGTAGATTTCGTCGATCATT+GGG | 0.450278 | 8_1:+21007759 | None:intergenic |
| ACATAAAACAGAAAAGGAAA+TGG | 0.452514 | 8_1:+21003431 | None:intergenic |
| GATGAAGATTGATGGGAGAT+TGG | 0.458011 | 8_1:-21007504 | Msa1184840:CDS |
| TTCGTCGATCATTGGGTTTG+AGG | 0.465364 | 8_1:+21007766 | None:intergenic |
| TATAGGTACTACCCAGTTCT+GGG | 0.466137 | 8_1:+21005187 | None:intergenic |
| ACTATTCTCATGGTCTACTA+GGG | 0.470008 | 8_1:-21005688 | Msa1184840:CDS |
| CTATGTTAACAAGGCAGAGC+AGG | 0.472146 | 8_1:-21005543 | Msa1184840:CDS |
| GGATTTGGGTTGGTGTGATG+GGG | 0.475054 | 8_1:-21007465 | Msa1184840:CDS |
| ATATTTCCCTACCTTATGGC+TGG | 0.477373 | 8_1:-21003556 | Msa1184840:three_prime_UTR |
| TCAAATCAACAGACACAAAT+GGG | 0.478924 | 8_1:+21004146 | None:intergenic |
| CTTCCGCAATTTCTTAGAGT+TGG | 0.479444 | 8_1:-21004966 | Msa1184840:CDS |
| GAAGCTCGACGCGCTTCGAT+TGG | 0.480351 | 8_1:-21007579 | Msa1184840:CDS |
| AACAATACATAAAACAGAAA+AGG | 0.481308 | 8_1:+21003425 | None:intergenic |
| GAAGTTGTGATGAAGATTGA+TGG | 0.481600 | 8_1:-21007512 | Msa1184840:CDS |
| ATTAATTTGTACTGTTCTGT+GGG | 0.482963 | 8_1:-21003319 | Msa1184840:three_prime_UTR |
| ACGGTTGCTACGGTTGTTGT+CGG | 0.484260 | 8_1:+21007718 | None:intergenic |
| CTTCCTGTCTGGAATACCTT+GGG | 0.489655 | 8_1:-21004267 | Msa1184840:CDS |
| GTTGGTGTGATGGGGTTGAG+AGG | 0.492699 | 8_1:-21007457 | Msa1184840:CDS |
| CCTTGATTCAACCAGCCATA+AGG | 0.500700 | 8_1:+21003545 | None:intergenic |
| GATTACTGATAATCAAATAC+AGG | 0.501737 | 8_1:-21004062 | Msa1184840:intron |
| GATTGATGGGAGATTGGGTG+AGG | 0.506720 | 8_1:-21007498 | Msa1184840:CDS |
| CCTTATGGCTGGTTGAATCA+AGG | 0.509913 | 8_1:-21003545 | Msa1184840:three_prime_UTR |
| TGGGAGTGTATACTGGATAA+GGG | 0.513868 | 8_1:+21004165 | None:intergenic |
| ATTGGGTGAGGGGTATGAGA+TGG | 0.514233 | 8_1:-21007486 | Msa1184840:CDS |
| GATTAATTTGTACTGTTCTG+TGG | 0.515029 | 8_1:-21003320 | Msa1184840:three_prime_UTR |
| AAGGAATGCCACCTTTCAAA+GGG | 0.515449 | 8_1:-21003756 | Msa1184840:CDS |
| TGCACTTGCAACATTTGATA+GGG | 0.517580 | 8_1:-21005118 | Msa1184840:CDS |
| TGGAAATTATTATCGGGTCA+AGG | 0.518981 | 8_1:+21005510 | None:intergenic |
| AAAGGAATGCCACCTTTCAA+AGG | 0.519857 | 8_1:-21003757 | Msa1184840:CDS |
| ATTAAAGAAAGCATACGAAT+GGG | 0.521524 | 8_1:-21005734 | Msa1184840:CDS |
| TTGATGGGAGATTGGGTGAG+GGG | 0.525641 | 8_1:-21007496 | Msa1184840:CDS |
| TGTATTGTTACTCTGTCAGA+AGG | 0.526537 | 8_1:-21003411 | Msa1184840:three_prime_UTR |
| CCTCAAATCAAATCTGTCGC+TGG | 0.526883 | 8_1:-21004242 | Msa1184840:CDS |
| TGATGGGGTTGAGAGGAAGA+TGG | 0.528170 | 8_1:-21007450 | Msa1184840:CDS |
| TCCAAGCTACGATGTGCCGC+AGG | 0.532976 | 8_1:-21005491 | Msa1184840:CDS |
| GCGTATGATGAGATTAAGAA+AGG | 0.534614 | 8_1:-21007557 | Msa1184840:CDS |
| ATGAAGATTGATGGGAGATT+GGG | 0.535119 | 8_1:-21007503 | Msa1184840:CDS |
| AATTCTGGTCAGCATTGAGA+TGG | 0.539415 | 8_1:-21005588 | Msa1184840:CDS |
| TTCTAGAACCCTTTGAAAGG+TGG | 0.540033 | 8_1:+21003748 | None:intergenic |
| TTGATGTAGTGCAATAATCC+CGG | 0.540797 | 8_1:+21005639 | None:intergenic |
| GTATAAGCTTGCTGCTCGAA+AGG | 0.540877 | 8_1:-21005444 | Msa1184840:intron |
| GGAAATGGAGATGTAGTGAC+GGG | 0.541265 | 8_1:+21003446 | None:intergenic |
| GTCGGCGTCGTCACCGCCGT+TGG | 0.541524 | 8_1:+21007736 | None:intergenic |
| GATTAAAGAAAGCATACGAA+TGG | 0.542641 | 8_1:-21005735 | Msa1184840:CDS |
| CTAGAAGCAGGCCCAGAACT+GGG | 0.542861 | 8_1:-21005198 | Msa1184840:CDS |
| ATTGATGGGAGATTGGGTGA+GGG | 0.543300 | 8_1:-21007497 | Msa1184840:CDS |
| GGTATGAGATGGATTTGGGT+TGG | 0.544573 | 8_1:-21007475 | Msa1184840:CDS |
| AAAGGGTTCTAGAAACTGGA+AGG | 0.545587 | 8_1:-21003739 | Msa1184840:CDS |
| GTAGCTTGGAAATTATTATC+GGG | 0.552194 | 8_1:+21005504 | None:intergenic |
| GCTTCCTGTCTGGAATACCT+TGG | 0.554474 | 8_1:-21004268 | Msa1184840:CDS |
| GGAAATTATTATCGGGTCAA+GGG | 0.556947 | 8_1:+21005511 | None:intergenic |
| TTAAAAGTTATGTTCGTACC+CGG | 0.559675 | 8_1:-21005658 | Msa1184840:CDS |
| GTTCCCAAGGTATTCCAGAC+AGG | 0.563223 | 8_1:+21004264 | None:intergenic |
| ACTTCAATATTAGGGCATCA+AGG | 0.566142 | 8_1:-21003661 | Msa1184840:CDS |
| GATTTGATTTGAGGTTCCCA+AGG | 0.575211 | 8_1:+21004251 | None:intergenic |
| TGATTGCGCGACGGTTGCTA+CGG | 0.575568 | 8_1:+21007708 | None:intergenic |
| AATTTGTACTGTTCTGTGGG+TGG | 0.581516 | 8_1:-21003316 | Msa1184840:three_prime_UTR |
| TGATGTAGTGCAATAATCCC+GGG | 0.582207 | 8_1:+21005640 | None:intergenic |
| CGCCGCTCATGATTGCGCGA+CGG | 0.583779 | 8_1:+21007699 | None:intergenic |
| GCTTACTCCTCTCTCTACTC+AGG | 0.588216 | 8_1:-21007659 | Msa1184840:CDS |
| AGTTTCTAGAACCCTTTGAA+AGG | 0.589137 | 8_1:+21003745 | None:intergenic |
| CAAGATGTTGCAACATATGG+AGG | 0.589980 | 8_1:-21005147 | Msa1184840:CDS |
| CGCAGGATTGGCAAATCTAG+AGG | 0.590488 | 8_1:-21005474 | Msa1184840:CDS |
| AGATGGAGCAGAAGAAAGAG+AGG | 0.591119 | 8_1:-21007433 | Msa1184840:CDS |
| AGAGTTGGTACCCGAAGTAA+GGG | 0.593120 | 8_1:-21004951 | Msa1184840:CDS |
| AGGAAATGGAGATGTAGTGA+CGG | 0.596198 | 8_1:+21003445 | None:intergenic |
| TAAAAGTTATGTTCGTACCC+GGG | 0.599599 | 8_1:-21005657 | Msa1184840:CDS |
| GATTCAACCAGCCATAAGGT+AGG | 0.602462 | 8_1:+21003549 | None:intergenic |
| AGTAAGCTTCGATGTCGAGT+TGG | 0.604462 | 8_1:+21007675 | None:intergenic |
| AAGATTTGATCTCAGCAACA+TGG | 0.606774 | 8_1:+21003694 | None:intergenic |
| ATTCAACCAGCCATAAGGTA+GGG | 0.607564 | 8_1:+21003550 | None:intergenic |
| AACCGTCGCGCAATCATGAG+CGG | 0.608111 | 8_1:-21007701 | Msa1184840:CDS |
| TGTTCGACCTGAGTAGAGAG+AGG | 0.615845 | 8_1:+21007652 | None:intergenic |
| ATTCTGGTCAGCATTGAGAT+GGG | 0.616057 | 8_1:-21005587 | Msa1184840:CDS |
| AAGTTGTGATGAAGATTGAT+GGG | 0.618821 | 8_1:-21007511 | Msa1184840:CDS |
| TGTCTCAAGCTATGTTAACA+AGG | 0.619773 | 8_1:-21005552 | Msa1184840:CDS |
| CTATTCTCATGGTCTACTAG+GGG | 0.620012 | 8_1:-21005687 | Msa1184840:CDS |
| GTACCAACTCTAAGAAATTG+CGG | 0.634001 | 8_1:+21004963 | None:intergenic |
| ATTCCAGACAGGAAGCATAG+TGG | 0.635504 | 8_1:+21004275 | None:intergenic |
| GTATTGTTACTCTGTCAGAA+GGG | 0.646346 | 8_1:-21003410 | Msa1184840:three_prime_UTR |
| CTCTAGATTTGCCAATCCTG+CGG | 0.651687 | 8_1:+21005475 | None:intergenic |
| ATCGACGAAATCTACACCAA+CGG | 0.654684 | 8_1:-21007752 | Msa1184840:CDS |
| GAACAAGAGCAAGAACGCTA+CGG | 0.656521 | 8_1:-21007603 | Msa1184840:CDS |
| AAGGGTTCTAGAAACTGGAA+GGG | 0.656638 | 8_1:-21003738 | Msa1184840:CDS |
| ATGCACGACATGCAGACCAA+AGG | 0.665248 | 8_1:-21003775 | Msa1184840:CDS |
| GATCGTAAAGTGTCTCAACA+TGG | 0.668297 | 8_1:+21004203 | None:intergenic |
| CAGGTCGAACAAAGATCATG+CGG | 0.684498 | 8_1:-21007640 | Msa1184840:CDS |
| GATTGAAGACAACAGGACTG+AGG | 0.712170 | 8_1:-21003624 | Msa1184840:three_prime_UTR |
| GACGAAATCTACACCAACGG+CGG | 0.740767 | 8_1:-21007749 | Msa1184840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTTTGTTATTATTATTT+AGG | - | chr8_1:21004176-21004195 | Msa1184840:CDS | 10.0% |
| !!! | TAGTTTGTTATTATTATTTA+GGG | - | chr8_1:21004177-21004196 | Msa1184840:CDS | 10.0% |
| !!! | TAATTAAGTTGTATTAAAAT+TGG | - | chr8_1:21004509-21004528 | Msa1184840:intron | 10.0% |
| !!! | AATTAAGTTGTATTAAAATT+GGG | - | chr8_1:21004510-21004529 | Msa1184840:intron | 10.0% |
| !! | TTAGAAAAAATATATATTTG+GGG | - | chr8_1:21006378-21006397 | Msa1184840:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004640-21004659 | Msa1184840:intron | 100.0% |
| !!! | TTTTCATTATGAAATGAATT+AGG | - | chr8_1:21003951-21003970 | Msa1184840:intron | 15.0% |
| !! | TTTCATTATGAAATGAATTA+GGG | - | chr8_1:21003952-21003971 | Msa1184840:intron | 15.0% |
| !!! | TTTATTCAAACTATTTTGTA+AGG | - | chr8_1:21004870-21004889 | Msa1184840:intron | 15.0% |
| !! | AAAAATAAAAGAAATCTTGA+AGG | + | chr8_1:21005460-21005479 | None:intergenic | 15.0% |
| !!! | TGTATATAATAAACTAGTTT+AGG | - | chr8_1:21006458-21006477 | Msa1184840:intron | 15.0% |
| !! | TTAGACTTAATTGATATTTA+TGG | - | chr8_1:21006716-21006735 | Msa1184840:intron | 15.0% |
| !! | TAGACTTAATTGATATTTAT+GGG | - | chr8_1:21006717-21006736 | Msa1184840:intron | 15.0% |
| !!! | ATGTACAACATTTAATTTTA+TGG | - | chr8_1:21007723-21007742 | Msa1184840:CDS | 15.0% |
| !!! | ATTTCTCTTTTCAACATTTT+TGG | - | chr8_1:21003848-21003867 | Msa1184840:intron | 20.0% |
| !! | TGAAAATAGTTTATAACCTA+TGG | - | chr8_1:21004019-21004038 | Msa1184840:intron | 20.0% |
| !! | GAAAATAGTTTATAACCTAT+GGG | - | chr8_1:21004020-21004039 | Msa1184840:intron | 20.0% |
| !! | TGTTATTATTATTTAGGGAT+AGG | - | chr8_1:21004182-21004201 | Msa1184840:CDS | 20.0% |
| !! | GTTATTATTATTTAGGGATA+GGG | - | chr8_1:21004183-21004202 | Msa1184840:CDS | 20.0% |
| !!! | ATAAACACTTGAAATTGTTT+TGG | - | chr8_1:21004316-21004335 | Msa1184840:intron | 20.0% |
| !! | AAAACAGGTTATAGTTTATA+TGG | - | chr8_1:21004427-21004446 | Msa1184840:intron | 20.0% |
| !! | AAACAGGTTATAGTTTATAT+GGG | - | chr8_1:21004428-21004447 | Msa1184840:intron | 20.0% |
| !!! | AACAGTCAAGTTTTATTTTT+CGG | - | chr8_1:21004578-21004597 | Msa1184840:intron | 20.0% |
| !!! | TATAAATTGTTAATTTGCTG+AGG | - | chr8_1:21004724-21004743 | Msa1184840:intron | 20.0% |
| !! | ATAGTTTGAATAAACAAATC+AGG | + | chr8_1:21004864-21004883 | None:intergenic | 20.0% |
| !!! | TACTTTCAATTTTTGTGTAT+TGG | - | chr8_1:21004898-21004917 | Msa1184840:intron | 20.0% |
| !!! | AATTTGGAATCATCTTATAT+TGG | - | chr8_1:21005267-21005286 | Msa1184840:intron | 20.0% |
| !! | GATCTATGAAATATTCTATT+TGG | - | chr8_1:21005909-21005928 | Msa1184840:intron | 20.0% |
| !! | AGACTTAATTGATATTTATG+GGG | - | chr8_1:21006718-21006737 | Msa1184840:intron | 20.0% |
| !! | AAATTAAAACATTTCAAACC+TGG | - | chr8_1:21006781-21006800 | Msa1184840:intron | 20.0% |
| !!! | TTGATTGAATTTTGTTGAAT+TGG | - | chr8_1:21006807-21006826 | Msa1184840:intron | 20.0% |
| !!! | TTTTGTTGAATTGGTATTAA+TGG | - | chr8_1:21006816-21006835 | Msa1184840:intron | 20.0% |
| !! | TTAAACATGACTTCAATATT+AGG | - | chr8_1:21007558-21007577 | Msa1184840:CDS | 20.0% |
| !! | TAAACATGACTTCAATATTA+GGG | - | chr8_1:21007559-21007578 | Msa1184840:CDS | 20.0% |
| !!! | TTTTGTATATACTCTTTCAT+AGG | - | chr8_1:21007751-21007770 | Msa1184840:CDS | 20.0% |
| !! | AACAATACATAAAACAGAAA+AGG | + | chr8_1:21007806-21007825 | None:intergenic | 20.0% |
| !!! | GGTTTTTGTTGTTATTGTTT+AGG | - | chr8_1:21003869-21003888 | Msa1184840:intron | 25.0% |
| !! | TATTTTCATAAGCAATCTAG+TGG | + | chr8_1:21004007-21004026 | None:intergenic | 25.0% |
| !! | AAGTCAAATTATTTTCCCAT+AGG | + | chr8_1:21004038-21004057 | None:intergenic | 25.0% |
| ! | TAATGAGTGTTAACTAGTAT+AGG | - | chr8_1:21004692-21004711 | Msa1184840:intron | 25.0% |
| !! | TTCAATTTTTGTGTATTGGA+TGG | - | chr8_1:21004902-21004921 | Msa1184840:intron | 25.0% |
| !!! | ATTTGTTTTGTTGATTCTTC+TGG | - | chr8_1:21004946-21004965 | Msa1184840:CDS | 25.0% |
| ! | CTATTCAATTCAATACAAAC+AGG | + | chr8_1:21004977-21004996 | None:intergenic | 25.0% |
| ! | GATACTCTATACAAACTAAA+AGG | + | chr8_1:21005043-21005062 | None:intergenic | 25.0% |
| ! | CAACTACCTTAATTCAATTA+CGG | - | chr8_1:21005408-21005427 | Msa1184840:intron | 25.0% |
| !! | ATTAAAGAAAGCATACGAAT+GGG | - | chr8_1:21005494-21005513 | Msa1184840:CDS | 25.0% |
| ! | TCAAACTACTGGATTATTAA+GGG | - | chr8_1:21005876-21005895 | Msa1184840:intron | 25.0% |
| !! | AATATTCTATTTGGAGTTTG+AGG | - | chr8_1:21005918-21005937 | Msa1184840:intron | 25.0% |
| ! | ACCTATTAACTTCATTTCTT+TGG | - | chr8_1:21005977-21005996 | Msa1184840:intron | 25.0% |
| ! | GTAGTCATTAAGAAGAATAA+TGG | + | chr8_1:21006173-21006192 | None:intergenic | 25.0% |
| !!! | GTCTTCATGATTTTATTTCT+TGG | - | chr8_1:21006213-21006232 | Msa1184840:intron | 25.0% |
| !! | TGATAAATGACTTTTACTCA+AGG | - | chr8_1:21006303-21006322 | Msa1184840:intron | 25.0% |
| ! | TACATGTGATTATGGTAATT+AGG | - | chr8_1:21006419-21006438 | Msa1184840:intron | 25.0% |
| !! | AATAAACTAGTTTAGGCATA+TGG | - | chr8_1:21006465-21006484 | Msa1184840:intron | 25.0% |
| !! | ATTCCAATTCTTTTCAATTC+CGG | + | chr8_1:21006652-21006671 | None:intergenic | 25.0% |
| ! | ACAAAATTCAATCAAATTCC+AGG | + | chr8_1:21006802-21006821 | None:intergenic | 25.0% |
| ! | GATTACTGATAATCAAATAC+AGG | - | chr8_1:21007166-21007185 | Msa1184840:intron | 25.0% |
| ! | AATTGTATGCCAAAGTTATT+TGG | + | chr8_1:21007306-21007325 | None:intergenic | 25.0% |
| ! | ACATAAAACAGAAAAGGAAA+TGG | + | chr8_1:21007800-21007819 | None:intergenic | 25.0% |
| !! | CATTTTTATGATACCTATCA+TGG | + | chr8_1:21007877-21007896 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTACTGTTCTGT+GGG | - | chr8_1:21007909-21007928 | Msa1184840:five_prime_UTR | 25.0% |
| !!! | GTAAAAGTGATTTTTTCCAC+TGG | + | chr8_1:21003347-21003366 | None:intergenic | 30.0% |
| AAGTTGTGATGAAGATTGAT+GGG | - | chr8_1:21003717-21003736 | Msa1184840:CDS | 30.0% | |
| AGAATGAGCTTAATGCTTAT+AGG | - | chr8_1:21003822-21003841 | Msa1184840:intron | 30.0% | |
| GAATGAGCTTAATGCTTATA+GGG | - | chr8_1:21003823-21003842 | Msa1184840:intron | 30.0% | |
| ! | GAAATGAATTAGGGTATCAT+TGG | - | chr8_1:21003961-21003980 | Msa1184840:intron | 30.0% |
| !!! | TGTGAAGAGTCGATTTTTTT+TGG | - | chr8_1:21004098-21004117 | Msa1184840:CDS | 30.0% |
| !!! | GTGAAGAGTCGATTTTTTTT+GGG | - | chr8_1:21004099-21004118 | Msa1184840:CDS | 30.0% |
| ! | TTTTCAACATGAGATGAATC+AGG | - | chr8_1:21004263-21004282 | Msa1184840:CDS | 30.0% |
| TTTCAACATGAGATGAATCA+GGG | - | chr8_1:21004264-21004283 | Msa1184840:CDS | 30.0% | |
| ! | ATTTCAAGTGTTTATGCTAG+TGG | + | chr8_1:21004311-21004330 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTATTTTTCGGTG+TGG | - | chr8_1:21004583-21004602 | Msa1184840:intron | 30.0% |
| !! | TTTATTTTTCGGTGTGGATT+TGG | - | chr8_1:21004589-21004608 | Msa1184840:intron | 30.0% |
| GTTAACACTCATTAAATCTG+AGG | + | chr8_1:21004686-21004705 | None:intergenic | 30.0% | |
| AATAAACAAATCAGGACTTC+GGG | + | chr8_1:21004856-21004875 | None:intergenic | 30.0% | |
| GAATAAACAAATCAGGACTT+CGG | + | chr8_1:21004857-21004876 | None:intergenic | 30.0% | |
| TGTTGTGTTAAATAGATGTG+TGG | - | chr8_1:21005147-21005166 | Msa1184840:CDS | 30.0% | |
| TGAATTAAGGTAGTTGGAAA+AGG | + | chr8_1:21005404-21005423 | None:intergenic | 30.0% | |
| CGTAATTGAATTAAGGTAGT+TGG | + | chr8_1:21005410-21005429 | None:intergenic | 30.0% | |
| ! | GATTAAAGAAAGCATACGAA+TGG | - | chr8_1:21005493-21005512 | Msa1184840:CDS | 30.0% |
| TTAAAAGTTATGTTCGTACC+CGG | - | chr8_1:21005570-21005589 | Msa1184840:CDS | 30.0% | |
| GTAGCTTGGAAATTATTATC+GGG | + | chr8_1:21005727-21005746 | None:intergenic | 30.0% | |
| CGTAGCTTGGAAATTATTAT+CGG | + | chr8_1:21005728-21005747 | None:intergenic | 30.0% | |
| CTCAAACTACTGGATTATTA+AGG | - | chr8_1:21005875-21005894 | Msa1184840:intron | 30.0% | |
| GCCAAAGAAATGAAGTTAAT+AGG | + | chr8_1:21005981-21006000 | None:intergenic | 30.0% | |
| AGCTGCAATTACTTCATTAT+AGG | + | chr8_1:21006061-21006080 | None:intergenic | 30.0% | |
| TAATGGTCATGAAAACACAA+TGG | + | chr8_1:21006156-21006175 | None:intergenic | 30.0% | |
| ATTTATCAGTTCCCTTACTT+CGG | + | chr8_1:21006291-21006310 | None:intergenic | 30.0% | |
| CTGTATAGTACATGTGATTA+TGG | - | chr8_1:21006411-21006430 | Msa1184840:intron | 30.0% | |
| ! | CTCTCATTTCTTTTCTTACA+TGG | - | chr8_1:21006501-21006520 | Msa1184840:intron | 30.0% |
| ! | TTCTTGTTTAACTGAGTCAA+AGG | - | chr8_1:21006559-21006578 | Msa1184840:intron | 30.0% |
| TGAAATTGAGAGTCTTAGTT+TGG | - | chr8_1:21006582-21006601 | Msa1184840:intron | 30.0% | |
| TTTACTGAGCACAAATCAAA+AGG | + | chr8_1:21006764-21006783 | None:intergenic | 30.0% | |
| TCAAATCAACAGACACAAAT+GGG | + | chr8_1:21007085-21007104 | None:intergenic | 30.0% | |
| TAACTTTCTATAACATAGCC+TGG | + | chr8_1:21007237-21007256 | None:intergenic | 30.0% | |
| CGTCTCTTTACTAAAAAAGA+AGG | - | chr8_1:21007339-21007358 | Msa1184840:intron | 30.0% | |
| ! | CTCGTAATTTATGGAACTTT+TGG | - | chr8_1:21007389-21007408 | Msa1184840:intron | 30.0% |
| CATCAAGGAAACTTTGATTA+TGG | - | chr8_1:21007582-21007601 | Msa1184840:CDS | 30.0% | |
| AAGAATATTTCCCTACCTTA+TGG | - | chr8_1:21007668-21007687 | Msa1184840:CDS | 30.0% | |
| AGTTATTGTATCACCATGAT+AGG | - | chr8_1:21007861-21007880 | Msa1184840:five_prime_UTR | 30.0% | |
| !! | GATTAATTTGTACTGTTCTG+TGG | - | chr8_1:21007908-21007927 | Msa1184840:five_prime_UTR | 30.0% |
| GATTGTGTTGAATCTGTTGA+TGG | + | chr8_1:21003371-21003390 | None:intergenic | 35.0% | |
| ATGAATTGGGATTAGGGTTA+GGG | + | chr8_1:21003425-21003444 | None:intergenic | 35.0% | |
| TGTAGATTTCGTCGATCATT+GGG | + | chr8_1:21003472-21003491 | None:intergenic | 35.0% | |
| GCGTATGATGAGATTAAGAA+AGG | - | chr8_1:21003671-21003690 | Msa1184840:CDS | 35.0% | |
| AGAGAATACGCAGTTGTTTA+GGG | - | chr8_1:21003694-21003713 | Msa1184840:CDS | 35.0% | |
| GAAGTTGTGATGAAGATTGA+TGG | - | chr8_1:21003716-21003735 | Msa1184840:CDS | 35.0% | |
| ATGAAGATTGATGGGAGATT+GGG | - | chr8_1:21003725-21003744 | Msa1184840:CDS | 35.0% | |
| ! | GAATTAGGGTATCATTGGAT+TGG | - | chr8_1:21003966-21003985 | Msa1184840:intron | 35.0% |
| TTATACACGACGCTTGTATT+TGG | + | chr8_1:21004067-21004086 | None:intergenic | 35.0% | |
| ! | ATACAAGCGTCGTGTATAAT+AGG | - | chr8_1:21004068-21004087 | Msa1184840:CDS | 35.0% |
| TTGGTTTCGCCACTTATAAA+AGG | - | chr8_1:21004134-21004153 | Msa1184840:CDS | 35.0% | |
| TTTCGCCACTTATAAAAGGA+GGG | - | chr8_1:21004138-21004157 | Msa1184840:CDS | 35.0% | |
| ! | ATAGTTTGTGACATGTACGT+AGG | - | chr8_1:21004352-21004371 | Msa1184840:intron | 35.0% |
| ! | CCTGTTTTCATAAGCTATCT+TGG | + | chr8_1:21004415-21004434 | None:intergenic | 35.0% |
| CCAAGATAGCTTATGAAAAC+AGG | - | chr8_1:21004412-21004431 | Msa1184840:intron | 35.0% | |
| !!! | TAAGTACGCCCTTATTTTGA+AGG | - | chr8_1:21004829-21004848 | Msa1184840:intron | 35.0% |
| CCACTAAGTATCAAAAAGCA+TGG | + | chr8_1:21005081-21005100 | None:intergenic | 35.0% | |
| !! | CCATGCTTTTTGATACTTAG+TGG | - | chr8_1:21005078-21005097 | Msa1184840:intron | 35.0% |
| TATGCCAAACTATACTGTCA+CGG | - | chr8_1:21005324-21005343 | Msa1184840:intron | 35.0% | |
| CAGCAACCGTAATTGAATTA+AGG | + | chr8_1:21005417-21005436 | None:intergenic | 35.0% | |
| ! | CGAATGGGATACAATGATTT+TGG | - | chr8_1:21005509-21005528 | Msa1184840:CDS | 35.0% |
| ! | GGAGACTTTTACTATTCTCA+TGG | - | chr8_1:21005530-21005549 | Msa1184840:CDS | 35.0% |
| TACTATTCTCATGGTCTACT+AGG | - | chr8_1:21005539-21005558 | Msa1184840:CDS | 35.0% | |
| ACTATTCTCATGGTCTACTA+GGG | - | chr8_1:21005540-21005559 | Msa1184840:CDS | 35.0% | |
| TAAAAGTTATGTTCGTACCC+GGG | - | chr8_1:21005571-21005590 | Msa1184840:CDS | 35.0% | |
| TTGATGTAGTGCAATAATCC+CGG | + | chr8_1:21005592-21005611 | None:intergenic | 35.0% | |
| CATGTGTTTGAGTACAATTC+TGG | - | chr8_1:21005625-21005644 | Msa1184840:CDS | 35.0% | |
| TGTCTCAAGCTATGTTAACA+AGG | - | chr8_1:21005676-21005695 | Msa1184840:CDS | 35.0% | |
| GGAAATTATTATCGGGTCAA+GGG | + | chr8_1:21005720-21005739 | None:intergenic | 35.0% | |
| TGGAAATTATTATCGGGTCA+AGG | + | chr8_1:21005721-21005740 | None:intergenic | 35.0% | |
| ! | AGCAGCAAGCTTATACTTTT+TGG | + | chr8_1:21005780-21005799 | None:intergenic | 35.0% |
| TTAGATTCTGCTCAAACTAC+TGG | - | chr8_1:21005865-21005884 | Msa1184840:intron | 35.0% | |
| TGCATTAAATAGCAGAAACG+TGG | + | chr8_1:21006006-21006025 | None:intergenic | 35.0% | |
| ! | TTAATGCAGTTTCTAGAAGC+AGG | - | chr8_1:21006018-21006037 | Msa1184840:intron | 35.0% |
| TGCACTTGCAACATTTGATA+GGG | - | chr8_1:21006110-21006129 | Msa1184840:intron | 35.0% | |
| ATTTGATAGGGCAGAGTTAA+AGG | - | chr8_1:21006122-21006141 | Msa1184840:intron | 35.0% | |
| TAATGACTACTCAGAGACAT+TGG | - | chr8_1:21006183-21006202 | Msa1184840:intron | 35.0% | |
| ! | GTACCAACTCTAAGAAATTG+CGG | + | chr8_1:21006268-21006287 | None:intergenic | 35.0% |
| TTTATCAGTTCCCTTACTTC+GGG | + | chr8_1:21006290-21006309 | None:intergenic | 35.0% | |
| ! | TGACTTTTACTCAAGGTAAG+TGG | - | chr8_1:21006310-21006329 | Msa1184840:intron | 35.0% |
| ! | GACTTTTACTCAAGGTAAGT+GGG | - | chr8_1:21006311-21006330 | Msa1184840:intron | 35.0% |
| ! | AATTGAGAGTCTTAGTTTGG+TGG | - | chr8_1:21006585-21006604 | Msa1184840:intron | 35.0% |
| TGACCGGAATTGAAAAGAAT+TGG | - | chr8_1:21006646-21006665 | Msa1184840:intron | 35.0% | |
| GTCAAATCAACAGACACAAA+TGG | + | chr8_1:21007086-21007105 | None:intergenic | 35.0% | |
| !! | GTCTGTTGATTTGACTATGA+TGG | - | chr8_1:21007091-21007110 | Msa1184840:intron | 35.0% |
| CTGATAATCAAATACAGGTC+CGG | - | chr8_1:21007171-21007190 | Msa1184840:intron | 35.0% | |
| ACAATGCATAGAACTCAAAC+CGG | + | chr8_1:21007193-21007212 | None:intergenic | 35.0% | |
| CTTGAACAGCTCGTAATTTA+TGG | - | chr8_1:21007380-21007399 | Msa1184840:intron | 35.0% | |
| !! | AGTTTCTAGAACCCTTTGAA+AGG | + | chr8_1:21007486-21007505 | None:intergenic | 35.0% |
| !! | TTTCAAAGGGTTCTAGAAAC+TGG | - | chr8_1:21007485-21007504 | Msa1184840:CDS | 35.0% |
| AAGATTTGATCTCAGCAACA+TGG | + | chr8_1:21007537-21007556 | None:intergenic | 35.0% | |
| ! | ACTTCAATATTAGGGCATCA+AGG | - | chr8_1:21007567-21007586 | Msa1184840:CDS | 35.0% |
| ! | GATTATGGATTGAAGACAAC+AGG | - | chr8_1:21007597-21007616 | Msa1184840:CDS | 35.0% |
| TGTATTGTTACTCTGTCAGA+AGG | - | chr8_1:21007817-21007836 | Msa1184840:five_prime_UTR | 35.0% | |
| GTATTGTTACTCTGTCAGAA+GGG | - | chr8_1:21007818-21007837 | Msa1184840:five_prime_UTR | 35.0% | |
| GTGTGGAAAAAGGAAGAGAA+GGG | + | chr8_1:21003325-21003344 | None:intergenic | 40.0% | |
| ! | TTTTCCACTGGTGTGGAAAA+AGG | + | chr8_1:21003335-21003354 | None:intergenic | 40.0% |
| !!! | AGTGATTTTTTCCACTGGTG+TGG | + | chr8_1:21003342-21003361 | None:intergenic | 40.0% |
| CATGAATTGGGATTAGGGTT+AGG | + | chr8_1:21003426-21003445 | None:intergenic | 40.0% | |
| CTAACCCTAATCCCAATTCA+TGG | - | chr8_1:21003424-21003443 | Msa1184840:three_prime_UTR | 40.0% | |
| GTGTAGATTTCGTCGATCAT+TGG | + | chr8_1:21003473-21003492 | None:intergenic | 40.0% | |
| ATCGACGAAATCTACACCAA+CGG | - | chr8_1:21003476-21003495 | Msa1184840:three_prime_UTR | 40.0% | |
| GAGAGAATACGCAGTTGTTT+AGG | - | chr8_1:21003693-21003712 | Msa1184840:CDS | 40.0% | |
| GATGAAGATTGATGGGAGAT+TGG | - | chr8_1:21003724-21003743 | Msa1184840:CDS | 40.0% | |
| !!! | TTTTGGGTGTCGATGTTAGT+TGG | - | chr8_1:21004115-21004134 | Msa1184840:CDS | 40.0% |
| GTTTCGCCACTTATAAAAGG+AGG | - | chr8_1:21004137-21004156 | Msa1184840:CDS | 40.0% | |
| CCACTTATAAAAGGAGGGAA+GGG | - | chr8_1:21004143-21004162 | Msa1184840:CDS | 40.0% | |
| CACTTATAAAAGGAGGGAAG+GGG | - | chr8_1:21004144-21004163 | Msa1184840:CDS | 40.0% | |
| GAGATGAATCAGGGTATGTT+TGG | - | chr8_1:21004273-21004292 | Msa1184840:CDS | 40.0% | |
| GAATCAGGGTATGTTTGGAT+TGG | - | chr8_1:21004278-21004297 | Msa1184840:CDS | 40.0% | |
| TTGGGCCTTAATCTAAACAC+AGG | - | chr8_1:21004528-21004547 | Msa1184840:intron | 40.0% | |
| CGATGCCTGTGTTTAGATTA+AGG | + | chr8_1:21004536-21004555 | None:intergenic | 40.0% | |
| CTTCGGGTCCTTCAAAATAA+GGG | + | chr8_1:21004840-21004859 | None:intergenic | 40.0% | |
| ACTTCGGGTCCTTCAAAATA+AGG | + | chr8_1:21004841-21004860 | None:intergenic | 40.0% | |
| ! | AAAAAGCATGGAGAACGTAC+TGG | + | chr8_1:21005069-21005088 | None:intergenic | 40.0% |
| TACTTAGTGGCAGTTAGTAG+TGG | - | chr8_1:21005091-21005110 | Msa1184840:intron | 40.0% | |
| ACTTAGTGGCAGTTAGTAGT+GGG | - | chr8_1:21005092-21005111 | Msa1184840:intron | 40.0% | |
| GGTTATGTATGTAGCTTGAG+AGG | - | chr8_1:21005113-21005132 | Msa1184840:CDS | 40.0% | |
| GTGCTCTCAGGCTATAAATT+TGG | - | chr8_1:21005251-21005270 | Msa1184840:intron | 40.0% | |
| ATTTCATCCGAGCATCAACA+CGG | + | chr8_1:21005296-21005315 | None:intergenic | 40.0% | |
| AATGCCGTGACAGTATAGTT+TGG | + | chr8_1:21005331-21005350 | None:intergenic | 40.0% | |
| CACGGCATTACTATTTGACA+TGG | - | chr8_1:21005342-21005361 | Msa1184840:intron | 40.0% | |
| CTATTCTCATGGTCTACTAG+GGG | - | chr8_1:21005541-21005560 | Msa1184840:CDS | 40.0% | |
| TGATGTAGTGCAATAATCCC+GGG | + | chr8_1:21005591-21005610 | None:intergenic | 40.0% | |
| ! | AATTCTGGTCAGCATTGAGA+TGG | - | chr8_1:21005640-21005659 | Msa1184840:CDS | 40.0% |
| ! | ATTCTGGTCAGCATTGAGAT+GGG | - | chr8_1:21005641-21005660 | Msa1184840:CDS | 40.0% |
| TATAGGTACTACCCAGTTCT+GGG | + | chr8_1:21006044-21006063 | None:intergenic | 40.0% | |
| TTATAGGTACTACCCAGTTC+TGG | + | chr8_1:21006045-21006064 | None:intergenic | 40.0% | |
| GCTCAAGATGTTGCAACATA+TGG | - | chr8_1:21006078-21006097 | Msa1184840:intron | 40.0% | |
| CAAGATGTTGCAACATATGG+AGG | - | chr8_1:21006081-21006100 | Msa1184840:intron | 40.0% | |
| GTGCACTTGCAACATTTGAT+AGG | - | chr8_1:21006109-21006128 | Msa1184840:intron | 40.0% | |
| ! | CTCTAAGAAATTGCGGAAGT+TGG | + | chr8_1:21006261-21006280 | None:intergenic | 40.0% |
| CTTCCGCAATTTCTTAGAGT+TGG | - | chr8_1:21006262-21006281 | Msa1184840:intron | 40.0% | |
| ! | TTAGTTTGGTGGAATTGCAC+TGG | - | chr8_1:21006596-21006615 | Msa1184840:intron | 40.0% |
| ! | TAGTTTGGTGGAATTGCACT+GGG | - | chr8_1:21006597-21006616 | Msa1184840:intron | 40.0% |
| TGCATGGTACTAAGAATGAC+CGG | - | chr8_1:21006630-21006649 | Msa1184840:intron | 40.0% | |
| !! | GATTTGATTTGAGGTTCCCA+AGG | + | chr8_1:21006980-21006999 | None:intergenic | 40.0% |
| ! | GATCGTAAAGTGTCTCAACA+TGG | + | chr8_1:21007028-21007047 | None:intergenic | 40.0% |
| ! | TGGGAGTGTATACTGGATAA+GGG | + | chr8_1:21007066-21007085 | None:intergenic | 40.0% |
| ! | ATGGGAGTGTATACTGGATA+AGG | + | chr8_1:21007067-21007086 | None:intergenic | 40.0% |
| ! | ACACAAATGGGAGTGTATAC+TGG | + | chr8_1:21007073-21007092 | None:intergenic | 40.0% |
| GCATTCAAGACAACTGTTGT+TGG | - | chr8_1:21007119-21007138 | Msa1184840:intron | 40.0% | |
| TTGTGTTTACAAGTTCAGCC+AGG | - | chr8_1:21007216-21007235 | Msa1184840:intron | 40.0% | |
| TTTGAAAGGTGGCATTCCTT+TGG | + | chr8_1:21007472-21007491 | None:intergenic | 40.0% | |
| AAAGGAATGCCACCTTTCAA+AGG | - | chr8_1:21007471-21007490 | Msa1184840:CDS | 40.0% | |
| AAGGAATGCCACCTTTCAAA+GGG | - | chr8_1:21007472-21007491 | Msa1184840:CDS | 40.0% | |
| !! | TTCTAGAACCCTTTGAAAGG+TGG | + | chr8_1:21007483-21007502 | None:intergenic | 40.0% |
| !! | AAAGGGTTCTAGAAACTGGA+AGG | - | chr8_1:21007489-21007508 | Msa1184840:CDS | 40.0% |
| !! | AAGGGTTCTAGAAACTGGAA+GGG | - | chr8_1:21007490-21007509 | Msa1184840:CDS | 40.0% |
| ATATTTCCCTACCTTATGGC+TGG | - | chr8_1:21007672-21007691 | Msa1184840:CDS | 40.0% | |
| ATTCAACCAGCCATAAGGTA+GGG | + | chr8_1:21007681-21007700 | None:intergenic | 40.0% | |
| AGGAAATGGAGATGTAGTGA+CGG | + | chr8_1:21007786-21007805 | None:intergenic | 40.0% | |
| ! | GGGAGCTTTGACATAATTGT+TGG | - | chr8_1:21007838-21007857 | Msa1184840:five_prime_UTR | 40.0% |
| AATTTGTACTGTTCTGTGGG+TGG | - | chr8_1:21007912-21007931 | Msa1184840:five_prime_UTR | 40.0% | |
| GGTGTGGAAAAAGGAAGAGA+AGG | + | chr8_1:21003326-21003345 | None:intergenic | 45.0% | |
| ! | TCTTCCTTTTTCCACACCAG+TGG | - | chr8_1:21003328-21003347 | Msa1184840:three_prime_UTR | 45.0% |
| GCGTCCATGAATTGGGATTA+GGG | + | chr8_1:21003431-21003450 | None:intergenic | 45.0% | |
| TGCGTCCATGAATTGGGATT+AGG | + | chr8_1:21003432-21003451 | None:intergenic | 45.0% | |
| GTCTTCTGCGTCCATGAATT+GGG | + | chr8_1:21003438-21003457 | None:intergenic | 45.0% | |
| TTCGTCGATCATTGGGTTTG+AGG | + | chr8_1:21003465-21003484 | None:intergenic | 45.0% | |
| AGTAAGCTTCGATGTCGAGT+TGG | + | chr8_1:21003556-21003575 | None:intergenic | 45.0% | |
| CAGGTCGAACAAAGATCATG+CGG | - | chr8_1:21003588-21003607 | Msa1184840:three_prime_UTR | 45.0% | |
| GAACAAGAGCAAGAACGCTA+CGG | - | chr8_1:21003625-21003644 | Msa1184840:three_prime_UTR | 45.0% | |
| ATTGATGGGAGATTGGGTGA+GGG | - | chr8_1:21003731-21003750 | Msa1184840:CDS | 45.0% | |
| ! | TGAGGGGTATGAGATGGATT+TGG | - | chr8_1:21003748-21003767 | Msa1184840:CDS | 45.0% |
| ! | GAGGGGTATGAGATGGATTT+GGG | - | chr8_1:21003749-21003768 | Msa1184840:CDS | 45.0% |
| ! | GGTATGAGATGGATTTGGGT+TGG | - | chr8_1:21003753-21003772 | Msa1184840:CDS | 45.0% |
| !! | ATGGATTTGGGTTGGTGTGA+TGG | - | chr8_1:21003761-21003780 | Msa1184840:CDS | 45.0% |
| !! | TGGATTTGGGTTGGTGTGAT+GGG | - | chr8_1:21003762-21003781 | Msa1184840:CDS | 45.0% |
| AGATGGAGCAGAAGAAAGAG+AGG | - | chr8_1:21003795-21003814 | Msa1184840:CDS | 45.0% | |
| GCCACTTATAAAAGGAGGGA+AGG | - | chr8_1:21004142-21004161 | Msa1184840:CDS | 45.0% | |
| ! | CCCTTCCCTCCTTTTATAAG+TGG | + | chr8_1:21004146-21004165 | None:intergenic | 45.0% |
| GCGTACTTAAGCACTCTAGA+AGG | + | chr8_1:21004818-21004837 | None:intergenic | 45.0% | |
| AACCTTGTGAGTTGTGCTGT+AGG | - | chr8_1:21005013-21005032 | Msa1184840:intron | 45.0% | |
| AACCTACAGCACAACTCACA+AGG | + | chr8_1:21005018-21005037 | None:intergenic | 45.0% | |
| ! | TAGCTTGAGAGGCATAGAGT+TGG | - | chr8_1:21005124-21005143 | Msa1184840:CDS | 45.0% |
| ATAGATGTGTGGCTCGAGAA+AGG | - | chr8_1:21005158-21005177 | Msa1184840:CDS | 45.0% | |
| TAGATGTGTGGCTCGAGAAA+GGG | - | chr8_1:21005159-21005178 | Msa1184840:CDS | 45.0% | |
| CCTCAGAAGTTCACAGAACA+TGG | + | chr8_1:21005206-21005225 | None:intergenic | 45.0% | |
| CCATGTTCTGTGAACTTCTG+AGG | - | chr8_1:21005203-21005222 | Msa1184840:CDS | 45.0% | |
| GTTAGCAATTGAGTGCTCTC+AGG | - | chr8_1:21005239-21005258 | Msa1184840:intron | 45.0% | |
| ! | TTGGTTACCGTGTTGATGCT+CGG | - | chr8_1:21005286-21005305 | Msa1184840:intron | 45.0% |
| GGAAAAGGTAAAGCTCGACT+GGG | + | chr8_1:21005389-21005408 | None:intergenic | 45.0% | |
| TGGAAAAGGTAAAGCTCGAC+TGG | + | chr8_1:21005390-21005409 | None:intergenic | 45.0% | |
| CTATGTTAACAAGGCAGAGC+AGG | - | chr8_1:21005685-21005704 | Msa1184840:CDS | 45.0% | |
| CTCTAGATTTGCCAATCCTG+CGG | + | chr8_1:21005756-21005775 | None:intergenic | 45.0% | |
| !! | GTATAAGCTTGCTGCTCGAA+AGG | - | chr8_1:21005784-21005803 | Msa1184840:intron | 45.0% |
| !! | TAGAGTTGGTACCCGAAGTA+AGG | - | chr8_1:21006276-21006295 | Msa1184840:intron | 45.0% |
| !! | AGAGTTGGTACCCGAAGTAA+GGG | - | chr8_1:21006277-21006296 | Msa1184840:intron | 45.0% |
| ! | ACTGGGTATTTCTGCATGCA+TGG | - | chr8_1:21006614-21006633 | Msa1184840:intron | 45.0% |
| ! | ATTCCAGACAGGAAGCATAG+TGG | + | chr8_1:21006956-21006975 | None:intergenic | 45.0% |
| ! | CTTCCTGTCTGGAATACCTT+GGG | - | chr8_1:21006961-21006980 | Msa1184840:intron | 45.0% |
| !! | CCAGCGACAGATTTGATTTG+AGG | + | chr8_1:21006989-21007008 | None:intergenic | 45.0% |
| CCTCAAATCAAATCTGTCGC+TGG | - | chr8_1:21006986-21007005 | Msa1184840:intron | 45.0% | |
| TGCGCACGTCCAAATAACTT+TGG | - | chr8_1:21007294-21007313 | Msa1184840:intron | 45.0% | |
| AAGAAGGAAAAGAGCCTGTC+TGG | - | chr8_1:21007355-21007374 | Msa1184840:intron | 45.0% | |
| AGAAGGAAAAGAGCCTGTCT+GGG | - | chr8_1:21007356-21007375 | Msa1184840:intron | 45.0% | |
| ! | TGGAACTTTTGGATCTGTGC+AGG | - | chr8_1:21007400-21007419 | Msa1184840:intron | 45.0% |
| GATTGAAGACAACAGGACTG+AGG | - | chr8_1:21007604-21007623 | Msa1184840:CDS | 45.0% | |
| GATTCAACCAGCCATAAGGT+AGG | + | chr8_1:21007682-21007701 | None:intergenic | 45.0% | |
| CCTTGATTCAACCAGCCATA+AGG | + | chr8_1:21007686-21007705 | None:intergenic | 45.0% | |
| ! | CCTTATGGCTGGTTGAATCA+AGG | - | chr8_1:21007683-21007702 | Msa1184840:CDS | 45.0% |
| GGAAATGGAGATGTAGTGAC+GGG | + | chr8_1:21007785-21007804 | None:intergenic | 45.0% | |
| !! | TATTAGAAAAAATATATATT+TGG | - | chr8_1:21006376-21006395 | Msa1184840:intron | 5.0% |
| !! | ATTAGAAAAAATATATATTT+GGG | - | chr8_1:21006377-21006396 | Msa1184840:intron | 5.0% |
| CGTCTTCTGCGTCCATGAAT+TGG | + | chr8_1:21003439-21003458 | None:intergenic | 50.0% | |
| GACGAAATCTACACCAACGG+CGG | - | chr8_1:21003479-21003498 | Msa1184840:three_prime_UTR | 50.0% | |
| ACGGTTGCTACGGTTGTTGT+CGG | + | chr8_1:21003513-21003532 | None:intergenic | 50.0% | |
| GCTTACTCCTCTCTCTACTC+AGG | - | chr8_1:21003569-21003588 | Msa1184840:three_prime_UTR | 50.0% | |
| TGTTCGACCTGAGTAGAGAG+AGG | + | chr8_1:21003579-21003598 | None:intergenic | 50.0% | |
| GATTGATGGGAGATTGGGTG+AGG | - | chr8_1:21003730-21003749 | Msa1184840:CDS | 50.0% | |
| TTGATGGGAGATTGGGTGAG+GGG | - | chr8_1:21003732-21003751 | Msa1184840:CDS | 50.0% | |
| ! | ATTGGGTGAGGGGTATGAGA+TGG | - | chr8_1:21003742-21003761 | Msa1184840:CDS | 50.0% |
| !! | GGATTTGGGTTGGTGTGATG+GGG | - | chr8_1:21003763-21003782 | Msa1184840:CDS | 50.0% |
| TGATGGGGTTGAGAGGAAGA+TGG | - | chr8_1:21003778-21003797 | Msa1184840:CDS | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | - | chr8_1:21004620-21004639 | Msa1184840:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+GGG | - | chr8_1:21004621-21004640 | Msa1184840:intron | 50.0% | |
| ! | CGCAGGATTGGCAAATCTAG+AGG | - | chr8_1:21005754-21005773 | Msa1184840:intron | 50.0% |
| ! | GCTTCCTGTCTGGAATACCT+TGG | - | chr8_1:21006960-21006979 | Msa1184840:intron | 50.0% |
| ! | GTTCCCAAGGTATTCCAGAC+AGG | + | chr8_1:21006967-21006986 | None:intergenic | 50.0% |
| ATGCACGACATGCAGACCAA+AGG | - | chr8_1:21007453-21007472 | Msa1184840:CDS | 50.0% | |
| TGATTGCGCGACGGTTGCTA+CGG | + | chr8_1:21003523-21003542 | None:intergenic | 55.0% | |
| AACCGTCGCGCAATCATGAG+CGG | - | chr8_1:21003527-21003546 | Msa1184840:three_prime_UTR | 55.0% | |
| ! | GTTGGTGTGATGGGGTTGAG+AGG | - | chr8_1:21003771-21003790 | Msa1184840:CDS | 55.0% |
| CGTGTGTGTGTGTGTGTGTG+TGG | - | chr8_1:21004619-21004638 | Msa1184840:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+GGG | - | chr8_1:21004622-21004641 | Msa1184840:intron | 55.0% | |
| TGTGTGTGTGTGTGTGTGGG+GGG | - | chr8_1:21004623-21004642 | Msa1184840:intron | 55.0% | |
| TCTAGAAGCAGGCCCAGAAC+TGG | - | chr8_1:21006029-21006048 | Msa1184840:intron | 55.0% | |
| CTAGAAGCAGGCCCAGAACT+GGG | - | chr8_1:21006030-21006049 | Msa1184840:intron | 55.0% | |
| CAGCCACTATGCTTCCTGTC+TGG | - | chr8_1:21006950-21006969 | Msa1184840:intron | 55.0% | |
| GAGCTGTTCAAGTCCCAGAC+AGG | + | chr8_1:21007372-21007391 | None:intergenic | 55.0% | |
| GAAGCTCGACGCGCTTCGAT+TGG | - | chr8_1:21003649-21003668 | Msa1184840:exon | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | - | chr8_1:21004624-21004643 | Msa1184840:intron | 60.0% | |
| TGTGTGTGTGTGTGTGGGGG+GGG | - | chr8_1:21004625-21004644 | Msa1184840:intron | 60.0% | |
| TCCAAGCTACGATGTGCCGC+AGG | - | chr8_1:21005737-21005756 | Msa1184840:CDS | 60.0% | |
| TCCTGCGGCACATCGTAGCT+TGG | + | chr8_1:21005741-21005760 | None:intergenic | 60.0% | |
| GCTACGATGTGCCGCAGGAT+TGG | - | chr8_1:21005742-21005761 | Msa1184840:CDS | 60.0% | |
| CGCCGCTCATGATTGCGCGA+CGG | + | chr8_1:21003532-21003551 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | - | chr8_1:21004626-21004645 | Msa1184840:intron | 65.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | - | chr8_1:21004627-21004646 | Msa1184840:intron | 65.0% | |
| GTGTGTGTGTGTGGGGGGGG+GGG | - | chr8_1:21004628-21004647 | Msa1184840:intron | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | - | chr8_1:21004629-21004648 | Msa1184840:intron | 70.0% | |
| GTCGGCGTCGTCACCGCCGT+TGG | + | chr8_1:21003495-21003514 | None:intergenic | 75.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | - | chr8_1:21004630-21004649 | Msa1184840:intron | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | - | chr8_1:21004631-21004650 | Msa1184840:intron | 75.0% | |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | - | chr8_1:21004632-21004651 | Msa1184840:intron | 80.0% |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | - | chr8_1:21004633-21004652 | Msa1184840:intron | 80.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | - | chr8_1:21004634-21004653 | Msa1184840:intron | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004635-21004654 | Msa1184840:intron | 85.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004636-21004655 | Msa1184840:intron | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004637-21004656 | Msa1184840:intron | 90.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004638-21004657 | Msa1184840:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:21004639-21004658 | Msa1184840:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 21003313 | 21007937 | 21003313 | ID=Msa1184840;Name=Msa1184840 |
| chr8_1 | mRNA | 21003313 | 21007937 | 21003313 | ID=Msa1184840-mRNA-1;Parent=Msa1184840;Name=Msa1184840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=130|0.8|0.66|1|1|1|6|339|449 |
| chr8_1 | exon | 21003313 | 21003828 | 21003313 | ID=Msa1184840-mRNA-1:exon:8001;Parent=Msa1184840-mRNA-1 |
| chr8_1 | exon | 21004063 | 21004297 | 21004063 | ID=Msa1184840-mRNA-1:exon:8000;Parent=Msa1184840-mRNA-1 |
| chr8_1 | exon | 21004926 | 21005009 | 21004926 | ID=Msa1184840-mRNA-1:exon:7999;Parent=Msa1184840-mRNA-1 |
| chr8_1 | exon | 21005093 | 21005223 | 21005093 | ID=Msa1184840-mRNA-1:exon:7998;Parent=Msa1184840-mRNA-1 |
| chr8_1 | exon | 21005445 | 21005765 | 21005445 | ID=Msa1184840-mRNA-1:exon:7997;Parent=Msa1184840-mRNA-1 |
| chr8_1 | exon | 21007406 | 21007937 | 21007406 | ID=Msa1184840-mRNA-1:exon:7996;Parent=Msa1184840-mRNA-1 |
| chr8_1 | five_prime_UTR | 21007808 | 21007937 | 21007808 | ID=Msa1184840-mRNA-1:five_prime_utr;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21007406 | 21007807 | 21007406 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21005445 | 21005765 | 21005445 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21005093 | 21005223 | 21005093 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21004926 | 21005009 | 21004926 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21004063 | 21004297 | 21004063 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | CDS | 21003652 | 21003828 | 21003652 | ID=Msa1184840-mRNA-1:cds;Parent=Msa1184840-mRNA-1 |
| chr8_1 | three_prime_UTR | 21003313 | 21003651 | 21003313 | ID=Msa1184840-mRNA-1:three_prime_utr;Parent=Msa1184840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
