Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291280 | XP_013464283.2 | 95.668 | 277 | 12 | 0 | 1 | 277 | 1 | 277 | 6.34e-175 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291280 | sp|Q5RAP0|UN45A_PONAB | 39.216 | 102 | 62 | 0 | 9 | 110 | 13 | 114 | 7.41e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012200 | Msa0291280 | 0.801462 | 8.903689e-49 | -8.615850e-47 |
| Msa0044090 | Msa0291280 | 0.801382 | 9.243250e-49 | -8.615850e-47 |
| Msa0081620 | Msa0291280 | 0.801382 | 9.243250e-49 | -8.615850e-47 |
| Msa0092410 | Msa0291280 | 0.824632 | 7.265413e-54 | -8.615850e-47 |
| Msa0106620 | Msa0291280 | 0.804886 | 1.741560e-49 | -8.615850e-47 |
| Msa0106710 | Msa0291280 | 0.809087 | 2.250680e-50 | -8.615850e-47 |
| Msa0117520 | Msa0291280 | 0.835670 | 1.466089e-56 | -8.615850e-47 |
| Msa0160960 | Msa0291280 | 0.835446 | 1.669965e-56 | -8.615850e-47 |
| Msa0162690 | Msa0291280 | 0.828311 | 9.647238e-55 | -8.615850e-47 |
| Msa0183760 | Msa0291280 | 0.807812 | 4.209971e-50 | -8.615850e-47 |
| Msa0187830 | Msa0291280 | 0.835134 | 2.002971e-56 | -8.615850e-47 |
| Msa0201570 | Msa0291280 | 0.807602 | 4.665636e-50 | -8.615850e-47 |
| Msa0204840 | Msa0291280 | 0.816690 | 4.856119e-52 | -8.615850e-47 |
| Msa0218460 | Msa0291280 | 0.803117 | 4.063061e-49 | -8.615850e-47 |
| Msa0220730 | Msa0291280 | 0.807058 | 6.085523e-50 | -8.615850e-47 |
| Msa0232020 | Msa0291280 | 0.804170 | 2.456922e-49 | -8.615850e-47 |
| Msa0240270 | Msa0291280 | 0.819080 | 1.401243e-52 | -8.615850e-47 |
| Msa0269560 | Msa0291280 | 0.828025 | 1.130555e-54 | -8.615850e-47 |
| Msa0282720 | Msa0291280 | 0.803452 | 3.462930e-49 | -8.615850e-47 |
| Msa0291280 | Msa0371950 | 0.818655 | 1.750454e-52 | -8.615850e-47 |
| Msa0291280 | Msa0382370 | 0.802376 | 5.777247e-49 | -8.615850e-47 |
| Msa0291280 | Msa0422180 | 0.828671 | 7.896376e-55 | -8.615850e-47 |
| Msa0291280 | Msa0432160 | 0.813594 | 2.364971e-51 | -8.615850e-47 |
| Msa0291280 | Msa0461790 | 0.807161 | 5.787614e-50 | -8.615850e-47 |
| Msa0291280 | Msa0476680 | 0.819438 | 1.161350e-52 | -8.615850e-47 |
| Msa0291280 | Msa0485490 | 0.801042 | 1.084937e-48 | -8.615850e-47 |
| Msa0291280 | Msa0521010 | 0.827403 | 1.595031e-54 | -8.615850e-47 |
| Msa0291280 | Msa0521670 | 0.807918 | 3.997445e-50 | -8.615850e-47 |
| Msa0291280 | Msa0581400 | 0.833379 | 5.516452e-56 | -8.615850e-47 |
| Msa0291280 | Msa0603370 | 0.831671 | 1.462388e-55 | -8.615850e-47 |
| Msa0291280 | Msa0614920 | 0.800236 | 1.584431e-48 | -8.615850e-47 |
| Msa0291280 | Msa0642730 | 0.806899 | 6.574580e-50 | -8.615850e-47 |
| Msa0291280 | Msa0644400 | 0.812948 | 3.278707e-51 | -8.615850e-47 |
| Msa0291280 | Msa0673120 | 0.839785 | 1.287475e-57 | -8.615850e-47 |
| Msa0291280 | Msa0705990 | 0.810055 | 1.393793e-50 | -8.615850e-47 |
| Msa0291280 | Msa0708310 | 0.813250 | 2.815189e-51 | -8.615850e-47 |
| Msa0291280 | Msa0711150 | 0.807204 | 5.665351e-50 | -8.615850e-47 |
| Msa0291280 | Msa0749440 | 0.802032 | 6.799449e-49 | -8.615850e-47 |
| Msa0291280 | Msa0756380 | 0.811367 | 7.252363e-51 | -8.615850e-47 |
| Msa0291280 | Msa0831850 | 0.804353 | 2.249584e-49 | -8.615850e-47 |
| Msa0291280 | Msa0863720 | 0.824393 | 8.269092e-54 | -8.615850e-47 |
| Msa0291280 | Msa0894710 | 0.805672 | 1.192118e-49 | -8.615850e-47 |
| Msa0291280 | Msa0902830 | 0.812709 | 3.699217e-51 | -8.615850e-47 |
| Msa0291280 | Msa0921420 | 0.824060 | 9.903955e-54 | -8.615850e-47 |
| Msa0291280 | Msa0936390 | 0.811959 | 5.391898e-51 | -8.615850e-47 |
| Msa0291280 | Msa0939110 | 0.817196 | 3.738471e-52 | -8.615850e-47 |
| Msa0291280 | Msa0960390 | 0.836132 | 1.119477e-56 | -8.615850e-47 |
| Msa0291280 | Msa0972810 | 0.800021 | 1.752029e-48 | -8.615850e-47 |
| Msa0291280 | Msa0994910 | 0.805256 | 1.457411e-49 | -8.615850e-47 |
| Msa0291280 | Msa1008750 | 0.802484 | 5.487867e-49 | -8.615850e-47 |
| Msa0291280 | Msa1076960 | 0.815704 | 8.065123e-52 | -8.615850e-47 |
| Msa0291280 | Msa1111870 | 0.800582 | 1.346799e-48 | -8.615850e-47 |
| Msa0291280 | Msa1122860 | 0.806604 | 7.589560e-50 | -8.615850e-47 |
| Msa0291280 | Msa1143020 | 0.830638 | 2.623015e-55 | -8.615850e-47 |
| Msa0291280 | Msa1158390 | 0.805746 | 1.150359e-49 | -8.615850e-47 |
| Msa0291280 | Msa1171140 | 0.813749 | 2.186385e-51 | -8.615850e-47 |
| Msa0291280 | Msa1177560 | 0.816325 | 5.860147e-52 | -8.615850e-47 |
| Msa0291280 | Msa1221330 | 0.853770 | 1.918598e-61 | -8.615850e-47 |
| Msa0291280 | Msa1225100 | 0.807449 | 5.028167e-50 | -8.615850e-47 |
| Msa0291280 | Msa1246360 | 0.804444 | 2.153798e-49 | -8.615850e-47 |
| Msa0291280 | Msa1280150 | 0.807748 | 4.343745e-50 | -8.615850e-47 |
| Msa0291280 | Msa1313700 | 0.800214 | 1.601065e-48 | -8.615850e-47 |
| Msa0291280 | Msa1329870 | 0.806302 | 8.786425e-50 | -8.615850e-47 |
| Msa0291280 | Msa1332050 | 0.809713 | 1.651750e-50 | -8.615850e-47 |
| Msa0291280 | Msa1338400 | 0.808530 | 2.960384e-50 | -8.615850e-47 |
| Msa0291280 | Msa1353890 | 0.801147 | 1.032564e-48 | -8.615850e-47 |
| Msa0291280 | Msa1365610 | 0.807854 | 4.125179e-50 | -8.615850e-47 |
| Msa0291280 | Msa1369920 | -0.802789 | 4.748202e-49 | -8.615850e-47 |
| Msa0291280 | Msa1392210 | 0.806322 | 8.702238e-50 | -8.615850e-47 |
| Msa0291280 | Msa1400930 | 0.804080 | 2.564465e-49 | -8.615850e-47 |
| Msa0291280 | Msa1408050 | 0.807367 | 5.231982e-50 | -8.615850e-47 |
| Msa0291280 | Msa1424630 | 0.801186 | 1.014011e-48 | -8.615850e-47 |
| Msa0291280 | Msa1430550 | 0.810799 | 9.629118e-51 | -8.615850e-47 |
| Msa0291280 | Msa1457160 | 0.807050 | 6.106881e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291280 | MtrunA17_Chr2g0311461 | 95.668 | 277 | 12 | 0 | 1 | 277 | 1 | 277 | 5.84e-179 | 493 |
| Msa0291280 | MtrunA17_Chr7g0237741 | 34.314 | 102 | 63 | 1 | 9 | 106 | 102 | 203 | 1.47e-15 | 74.7 |
| Msa0291280 | MtrunA17_Chr2g0323971 | 32.039 | 103 | 66 | 1 | 9 | 107 | 105 | 207 | 1.28e-13 | 69.3 |
| Msa0291280 | MtrunA17_Chr8g0339141 | 35.897 | 117 | 63 | 2 | 2 | 106 | 402 | 518 | 5.40e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0291280 | AT1G56090.1 | 59.170 | 289 | 82 | 8 | 2 | 277 | 7 | 272 | 6.88e-94 | 278 |
| Msa0291280 | AT1G56090.2 | 58.478 | 289 | 84 | 7 | 2 | 277 | 81 | 346 | 8.25e-93 | 278 |
| Msa0291280 | AT4G30480.2 | 36.893 | 103 | 61 | 1 | 9 | 107 | 112 | 214 | 3.73e-16 | 77.0 |
| Msa0291280 | AT3G25230.1 | 33.588 | 131 | 75 | 1 | 2 | 120 | 400 | 530 | 1.45e-12 | 67.8 |
| Msa0291280 | AT3G25230.2 | 33.588 | 131 | 75 | 1 | 2 | 120 | 400 | 530 | 1.59e-12 | 67.8 |
| Msa0291280 | AT4G30480.1 | 35.955 | 89 | 53 | 1 | 9 | 93 | 112 | 200 | 1.28e-11 | 63.2 |
Find 87 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATGTTTAACGAAATAAA+TGG | 0.225196 | 2_3:-39472821 | None:intergenic |
| TTGGAAGTGATTTGTTTGTT+TGG | 0.272503 | 2_3:-39472696 | None:intergenic |
| AACCTGGGGTCTGTTAGTTT+TGG | 0.304996 | 2_3:-39475049 | None:intergenic |
| AGAGGTAAAGAAGGAAGAAA+TGG | 0.313693 | 2_3:+39474943 | Msa0291280:CDS |
| TATCTATTTCTTAAAAGAAA+TGG | 0.315579 | 2_3:+39475630 | Msa0291280:three_prime_UTR |
| TAAGCTTCATGATTTCAAAA+AGG | 0.324407 | 2_3:+39473022 | Msa0291280:CDS |
| GGATCAAAACAGCCATTTCT+AGG | 0.351377 | 2_3:-39475360 | None:intergenic |
| TCCAAAGCAGAATGTCCTTT+TGG | 0.352019 | 2_3:-39475199 | None:intergenic |
| ACCTACAAGTCTCATAGTTT+TGG | 0.357287 | 2_3:-39475093 | None:intergenic |
| ATGCAGCAGCTTCTAATGTT+AGG | 0.374041 | 2_3:+39474975 | Msa0291280:CDS |
| AGTACTTCTACCTGATGATT+TGG | 0.385544 | 2_3:+39475480 | Msa0291280:three_prime_UTR |
| TGGAAGTGATTTGTTTGTTT+GGG | 0.387259 | 2_3:-39472695 | None:intergenic |
| TCCTCTTCTGACTCTGGTAT+TGG | 0.396425 | 2_3:-39474875 | None:intergenic |
| TGCCTGCTGAGGCTCATATA+TGG | 0.403973 | 2_3:+39475587 | Msa0291280:three_prime_UTR |
| ACCAAAAGGACATTCTGCTT+TGG | 0.425541 | 2_3:+39475198 | Msa0291280:CDS |
| AGAGATGATGAGGAAGGAGT+TGG | 0.430885 | 2_3:-39472715 | None:intergenic |
| GATGCTGAGGGCTCAAACAC+TGG | 0.436134 | 2_3:+39474337 | Msa0291280:CDS |
| CCATGCTTTGGATTGTTGCT+CGG | 0.437664 | 2_3:-39475161 | None:intergenic |
| AAATATGCAAACTAACTAAA+CGG | 0.445327 | 2_3:-39475541 | None:intergenic |
| CTTGAAGATCTACCAATCCT+AGG | 0.445980 | 2_3:+39475454 | Msa0291280:three_prime_UTR |
| TTATGTTTAACGAAATAAAT+GGG | 0.446709 | 2_3:-39472820 | None:intergenic |
| ACGGTGAATGTTGGTAGCTT+CGG | 0.452409 | 2_3:-39475522 | None:intergenic |
| GAGGTAAAGAAGGAAGAAAT+GGG | 0.452461 | 2_3:+39474944 | Msa0291280:CDS |
| AGAGTCCGTCACGGTACATC+TGG | 0.455718 | 2_3:-39472902 | None:intergenic |
| TAATGTTAGGAAAGATCTAA+AGG | 0.457566 | 2_3:+39474988 | Msa0291280:CDS |
| TGATATGAGGTACCTAGAAA+TGG | 0.462198 | 2_3:+39475348 | Msa0291280:three_prime_UTR |
| GTAATTATTCTGCTCTTCGT+TGG | 0.469348 | 2_3:-39472673 | None:intergenic |
| ACCAAAACTATGAGACTTGT+AGG | 0.471664 | 2_3:+39475092 | Msa0291280:CDS |
| ATGGAGTGAGAGAGATGATG+AGG | 0.476853 | 2_3:-39472725 | None:intergenic |
| TCCCAGTTTGGATGAAAACC+TGG | 0.483342 | 2_3:-39475065 | None:intergenic |
| AATGTTAGGAAAGATCTAAA+GGG | 0.493543 | 2_3:+39474989 | Msa0291280:CDS |
| GGCAAAGGTGTTATCAATGT+TGG | 0.494024 | 2_3:+39475019 | Msa0291280:CDS |
| AATTCAAATTCGAAAATCAA+TGG | 0.496635 | 2_3:+39472854 | Msa0291280:exon |
| GCTAGAAAGAGAGGTAAAGA+AGG | 0.507146 | 2_3:+39474934 | Msa0291280:CDS |
| AGAGTCAGAAGAGGAGTTCG+AGG | 0.514125 | 2_3:+39474883 | Msa0291280:CDS |
| ACATTGACAGCCAAATCATC+AGG | 0.514949 | 2_3:-39475490 | None:intergenic |
| ACATAAACAGTGACCTCTGA+TGG | 0.521664 | 2_3:+39475390 | Msa0291280:three_prime_UTR |
| TGCTTTGGACTACGCTCGGT+GGG | 0.522289 | 2_3:+39475213 | Msa0291280:CDS |
| CACCATATATGAGCCTCAGC+AGG | 0.525246 | 2_3:-39475589 | None:intergenic |
| TTACACGGACGCTATTGGTA+TGG | 0.529585 | 2_3:+39472944 | Msa0291280:CDS |
| TCGAACTCCTCTTCTGACTC+TGG | 0.530257 | 2_3:-39474881 | None:intergenic |
| AAAACGATTCCAAAACCAAA+AGG | 0.532797 | 2_3:+39475184 | Msa0291280:CDS |
| AGTGAGAGAGATGATGAGGA+AGG | 0.535503 | 2_3:-39472721 | None:intergenic |
| TTGAAGATCTACCAATCCTA+GGG | 0.536066 | 2_3:+39475455 | Msa0291280:three_prime_UTR |
| GGCTCATATATGGTGCTCAA+TGG | 0.537349 | 2_3:+39475597 | Msa0291280:three_prime_UTR |
| GTGAATGTTGGTAGCTTCGG+AGG | 0.552846 | 2_3:-39475519 | None:intergenic |
| AGAAGTACTTCCCCTAGGAT+TGG | 0.554687 | 2_3:-39475466 | None:intergenic |
| TCAGAAACCTCTCATTTCAC+AGG | 0.560954 | 2_3:-39475328 | None:intergenic |
| CTATGCAAAGCGATCTTCTG+AGG | 0.562298 | 2_3:-39472978 | None:intergenic |
| CCGAGCAACAATCCAAAGCA+TGG | 0.565014 | 2_3:+39475161 | Msa0291280:CDS |
| CCCAGTTTGGATGAAAACCT+GGG | 0.565859 | 2_3:-39475064 | None:intergenic |
| AAAGATCTAAAGGGTCAGCT+TGG | 0.567824 | 2_3:+39474998 | Msa0291280:CDS |
| CAAGGCGATGCTAGAAAGAG+AGG | 0.568116 | 2_3:+39474925 | Msa0291280:CDS |
| GTTTCTCACCATGCCTGCTG+AGG | 0.571069 | 2_3:+39475576 | Msa0291280:three_prime_UTR |
| TGACCTCTGATGGACAAGAA+TGG | 0.571257 | 2_3:+39475400 | Msa0291280:three_prime_UTR |
| ATTCTGCTTTGGACTACGCT+CGG | 0.572004 | 2_3:+39475209 | Msa0291280:CDS |
| AATGAGAGGTTTCTGATATG+AGG | 0.576548 | 2_3:+39475335 | Msa0291280:exon |
| CTAAAGGGTCAGCTTGGCAA+AGG | 0.576789 | 2_3:+39475004 | Msa0291280:CDS |
| TGCTCGCTTGAAGACACAGT+TGG | 0.578848 | 2_3:+39474448 | Msa0291280:CDS |
| CGAGGAACATGAAGATGAGA+AGG | 0.581126 | 2_3:+39474901 | Msa0291280:CDS |
| TATATGAGCCTCAGCAGGCA+TGG | 0.583689 | 2_3:-39475584 | None:intergenic |
| CAGTGGAGCATTGATGCTGA+GGG | 0.584787 | 2_3:+39474325 | Msa0291280:CDS |
| ACTAACTAAACGGTGAATGT+TGG | 0.589800 | 2_3:-39475531 | None:intergenic |
| ACAGTGGAGCATTGATGCTG+AGG | 0.595964 | 2_3:+39474324 | Msa0291280:CDS |
| AGTTCCTAAAGCACAAAACA+AGG | 0.599618 | 2_3:+39475132 | Msa0291280:CDS |
| TCAAACACTGGTGACACTGA+AGG | 0.602364 | 2_3:+39474349 | Msa0291280:CDS |
| AGATGATTCTAGTGAAGATG+AGG | 0.603985 | 2_3:+39475246 | Msa0291280:CDS |
| TGTCCATTCTTGTCCATCAG+AGG | 0.609200 | 2_3:-39475403 | None:intergenic |
| TCCAATACCAGAGTCAGAAG+AGG | 0.610299 | 2_3:+39474874 | Msa0291280:CDS |
| TCTGATGGACAAGAATGGAC+AGG | 0.611697 | 2_3:+39475405 | Msa0291280:three_prime_UTR |
| CAGGTAGAAGTACTTCCCCT+AGG | 0.613249 | 2_3:-39475471 | None:intergenic |
| CTCCAAAACTAACAGACCCC+AGG | 0.616760 | 2_3:+39475047 | Msa0291280:CDS |
| CTGCTTTGGACTACGCTCGG+TGG | 0.619980 | 2_3:+39475212 | Msa0291280:CDS |
| GGTCACTGTTTATGTTCACA+AGG | 0.623348 | 2_3:-39475382 | None:intergenic |
| TTCACACGAAAACGGTACTG+TGG | 0.632801 | 2_3:-39475289 | None:intergenic |
| TGATGATTTGGCTGTCAATG+TGG | 0.633556 | 2_3:+39475492 | Msa0291280:three_prime_UTR |
| TGAATGTTGGTAGCTTCGGA+GGG | 0.643307 | 2_3:-39475518 | None:intergenic |
| CCAGTTTGGATGAAAACCTG+GGG | 0.652670 | 2_3:-39475063 | None:intergenic |
| GTCACTGTTTATGTTCACAA+GGG | 0.661899 | 2_3:-39475381 | None:intergenic |
| ACATGAAGATGAGAAGGACA+AGG | 0.673983 | 2_3:+39474907 | Msa0291280:CDS |
| CCGTGACGGACTCTACAAAG+AGG | 0.689205 | 2_3:+39472911 | Msa0291280:CDS |
| TGAAGATCTACCAATCCTAG+GGG | 0.701265 | 2_3:+39475456 | Msa0291280:three_prime_UTR |
| TGTACGTCCTGTGAAATGAG+AGG | 0.706525 | 2_3:+39475321 | Msa0291280:exon |
| CCTCTTTGTAGAGTCCGTCA+CGG | 0.707488 | 2_3:-39472911 | None:intergenic |
| GCGACGAACAAGATCGAACG+CGG | 0.718343 | 2_3:+39472876 | Msa0291280:CDS |
| GGTCACCAGATGTACCGTGA+CGG | 0.752683 | 2_3:+39472897 | Msa0291280:CDS |
| GAGCTTGATAGCAATCACAG+TGG | 0.769707 | 2_3:+39474308 | Msa0291280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTCCTTAATTAAAAATA+CGG | + | chr2_3:39473597-39473616 | Msa0291280:intron | 10.0% |
| !! | TTATGTTTAACGAAATAAAT+GGG | - | chr2_3:39472823-39472842 | None:intergenic | 15.0% |
| !! | TTGTAAATATTGTATTAATG+AGG | + | chr2_3:39473210-39473229 | Msa0291280:intron | 15.0% |
| !! | TTCTAATAATTTAGATTAGT+TGG | + | chr2_3:39473695-39473714 | Msa0291280:intron | 15.0% |
| !! | TAAAATGAGAAATATTTGTT+GGG | + | chr2_3:39474130-39474149 | Msa0291280:intron | 15.0% |
| !!! | TATCTATTTCTTAAAAGAAA+TGG | + | chr2_3:39475630-39475649 | Msa0291280:three_prime_UTR | 15.0% |
| !! | GTTATGTTTAACGAAATAAA+TGG | - | chr2_3:39472824-39472843 | None:intergenic | 20.0% |
| !!! | TTTTCGAATTTGAATTTGTT+TGG | - | chr2_3:39472850-39472869 | None:intergenic | 20.0% |
| !! | AATTCAAATTCGAAAATCAA+TGG | + | chr2_3:39472854-39472873 | Msa0291280:exon | 20.0% |
| !!! | CTCTGTTCATTTTTTTTTTT+TGG | + | chr2_3:39473076-39473095 | Msa0291280:intron | 20.0% |
| !! | GTTTAGAAAAAGATAAACTA+TGG | - | chr2_3:39473162-39473181 | None:intergenic | 20.0% |
| !! | AATATTGTATTAATGAGGTT+CGG | + | chr2_3:39473215-39473234 | Msa0291280:intron | 20.0% |
| !!! | TTTTATGAATATTCCTAACT+AGG | + | chr2_3:39473460-39473479 | Msa0291280:intron | 20.0% |
| !! | AAAAATATCTTAACCTAGTT+AGG | - | chr2_3:39473476-39473495 | None:intergenic | 20.0% |
| !!! | TAAAATTTTATTTCCGCATT+TGG | - | chr2_3:39473580-39473599 | None:intergenic | 20.0% |
| !! | GATTTGTATTTGTAACAAAT+TGG | + | chr2_3:39473843-39473862 | Msa0291280:intron | 20.0% |
| !! | GTAAAATGAGAAATATTTGT+TGG | + | chr2_3:39474129-39474148 | Msa0291280:intron | 20.0% |
| !! | ATTATATTAGGTAGATTTGA+AGG | + | chr2_3:39474504-39474523 | Msa0291280:intron | 20.0% |
| !! | AAATATGCAAACTAACTAAA+CGG | - | chr2_3:39475544-39475563 | None:intergenic | 20.0% |
| ! | TAAGCTTCATGATTTCAAAA+AGG | + | chr2_3:39473022-39473041 | Msa0291280:CDS | 25.0% |
| ! | AAAAAATGAACAGAGAATAG+TGG | - | chr2_3:39473071-39473090 | None:intergenic | 25.0% |
| !!! | ACTTGCCGTATTTTTAATTA+AGG | - | chr2_3:39473605-39473624 | None:intergenic | 25.0% |
| ! | GAATTGCTAAATACTACAAA+GGG | - | chr2_3:39473654-39473673 | None:intergenic | 25.0% |
| ! | AGAATTGCTAAATACTACAA+AGG | - | chr2_3:39473655-39473674 | None:intergenic | 25.0% |
| ! | TTTGTTCAGAATTCAGATTA+TGG | + | chr2_3:39473734-39473753 | Msa0291280:intron | 25.0% |
| ! | TTGTTCAGAATTCAGATTAT+GGG | + | chr2_3:39473735-39473754 | Msa0291280:intron | 25.0% |
| !!! | TTATCCATTTTGTTTGACAA+TGG | + | chr2_3:39473934-39473953 | Msa0291280:intron | 25.0% |
| ! | AAAAAGGGTTCCAAAAAATA+CGG | - | chr2_3:39474073-39474092 | None:intergenic | 25.0% |
| !! | TCATTTTACTATGATTGACT+TGG | - | chr2_3:39474118-39474137 | None:intergenic | 25.0% |
| !! | AGATTACTCATAAGTGTTTT+AGG | + | chr2_3:39474534-39474553 | Msa0291280:intron | 25.0% |
| ! | AATTCTAGGTCAAATTTACA+AGG | - | chr2_3:39474772-39474791 | None:intergenic | 25.0% |
| ! | TAATGTTAGGAAAGATCTAA+AGG | + | chr2_3:39474988-39475007 | Msa0291280:CDS | 25.0% |
| ! | AATGTTAGGAAAGATCTAAA+GGG | + | chr2_3:39474989-39475008 | Msa0291280:CDS | 25.0% |
| !! | TGGAAGTGATTTGTTTGTTT+GGG | - | chr2_3:39472698-39472717 | None:intergenic | 30.0% |
| !! | TTGGAAGTGATTTGTTTGTT+TGG | - | chr2_3:39472699-39472718 | None:intergenic | 30.0% |
| !!! | GGAATTTTTGGTATTGTTTG+AGG | + | chr2_3:39473412-39473431 | Msa0291280:intron | 30.0% |
| TGGTATTGTTTGAGGATTAT+TGG | + | chr2_3:39473420-39473439 | Msa0291280:intron | 30.0% | |
| TATTGGAACTATCATAGTTC+TGG | + | chr2_3:39473437-39473456 | Msa0291280:intron | 30.0% | |
| !!! | TGTTTTTTTGACTCTTTCGT+AGG | - | chr2_3:39473518-39473537 | None:intergenic | 30.0% |
| CGAAAGAGTCAAAAAAACAA+AGG | + | chr2_3:39473519-39473538 | Msa0291280:intron | 30.0% | |
| !! | AATTTTATTTCCGCATTTGG+CGG | - | chr2_3:39473577-39473596 | None:intergenic | 30.0% |
| TAAGCATTCTTGAAATTCGT+GGG | + | chr2_3:39473624-39473643 | Msa0291280:intron | 30.0% | |
| TTTACTTGTAGATCTGTAGA+AGG | + | chr2_3:39473809-39473828 | Msa0291280:intron | 30.0% | |
| !! | CATTTTGTTTGACAATGGTT+GGG | + | chr2_3:39473939-39473958 | Msa0291280:intron | 30.0% |
| !! | ACTACTTTTGCCGTATTTTT+TGG | + | chr2_3:39474060-39474079 | Msa0291280:intron | 30.0% |
| !! | GGATTTCATACTTTGAAATG+AGG | + | chr2_3:39474151-39474170 | Msa0291280:intron | 30.0% |
| ATGATGCTTACTATCATTTC+AGG | + | chr2_3:39474259-39474278 | Msa0291280:intron | 30.0% | |
| !! | AAGATTTTGATAGACTTCTG+AGG | - | chr2_3:39474426-39474445 | None:intergenic | 30.0% |
| TCAGTTGCATGCATTATATT+AGG | + | chr2_3:39474492-39474511 | Msa0291280:intron | 30.0% | |
| TTAGGTAGATTTGAAGGATT+TGG | + | chr2_3:39474510-39474529 | Msa0291280:intron | 30.0% | |
| TATAGATGTGAAATGAAGAG+AGG | + | chr2_3:39474695-39474714 | Msa0291280:intron | 30.0% | |
| GAAGTAGGTCAATAAAAAGA+AGG | + | chr2_3:39474725-39474744 | Msa0291280:intron | 30.0% | |
| TAAAAAGAAGGTAGAGAAGA+AGG | + | chr2_3:39474737-39474756 | Msa0291280:intron | 30.0% | |
| AAAAAGAAGGTAGAGAAGAA+GGG | + | chr2_3:39474738-39474757 | Msa0291280:intron | 30.0% | |
| TTGACCTAGAATTATGTTCT+TGG | + | chr2_3:39474779-39474798 | Msa0291280:intron | 30.0% | |
| CATTCCAAGAACATAATTCT+AGG | - | chr2_3:39474786-39474805 | None:intergenic | 30.0% | |
| !!! | ATGCTATTTTTCATTGCTCA+AGG | + | chr2_3:39474839-39474858 | Msa0291280:intron | 30.0% |
| AAAACGATTCCAAAACCAAA+AGG | + | chr2_3:39475184-39475203 | Msa0291280:CDS | 30.0% | |
| ! | CAATTGTTTTCACACGAAAA+CGG | - | chr2_3:39475300-39475319 | None:intergenic | 30.0% |
| GTAATTATTCTGCTCTTCGT+TGG | - | chr2_3:39472676-39472695 | None:intergenic | 35.0% | |
| GACTTTACTTACAGCACAAT+AGG | + | chr2_3:39473328-39473347 | Msa0291280:intron | 35.0% | |
| AAAAAAAAGGATTGCTCGAG+AGG | + | chr2_3:39473386-39473405 | Msa0291280:intron | 35.0% | |
| AAAAAAAGGATTGCTCGAGA+GGG | + | chr2_3:39473387-39473406 | Msa0291280:intron | 35.0% | |
| GTAAGCATTCTTGAAATTCG+TGG | + | chr2_3:39473623-39473642 | Msa0291280:intron | 35.0% | |
| ! | TATGGGTTGTGAAATGTGAA+TGG | + | chr2_3:39473752-39473771 | Msa0291280:intron | 35.0% |
| TTGTAGATCTGTAGAAGGAT+AGG | + | chr2_3:39473814-39473833 | Msa0291280:intron | 35.0% | |
| CCAACCATTGTCAAACAAAA+TGG | - | chr2_3:39473941-39473960 | None:intergenic | 35.0% | |
| !! | CCATTTTGTTTGACAATGGT+TGG | + | chr2_3:39473938-39473957 | Msa0291280:intron | 35.0% |
| TTTCTATGATCACAATTCGC+AGG | - | chr2_3:39473976-39473995 | None:intergenic | 35.0% | |
| !! | GATTGACTTGGATTAGATAG+AGG | - | chr2_3:39474106-39474125 | None:intergenic | 35.0% |
| GAAGAGAAACTGACAAGAAA+GGG | - | chr2_3:39474177-39474196 | None:intergenic | 35.0% | |
| ! | TTCATCAAAAGCGTACAACT+AGG | - | chr2_3:39474199-39474218 | None:intergenic | 35.0% |
| ! | TTTTGATGTCAACAGACTCT+TGG | + | chr2_3:39474388-39474407 | Msa0291280:CDS | 35.0% |
| !! | TTTTGATAGACTTCTGAGGA+TGG | - | chr2_3:39474422-39474441 | None:intergenic | 35.0% |
| ATGCATGCAACTGAAATGAA+AGG | - | chr2_3:39474486-39474505 | None:intergenic | 35.0% | |
| GCTATCAACAGGATGAAAAA+GGG | - | chr2_3:39474581-39474600 | None:intergenic | 35.0% | |
| TGCTATCAACAGGATGAAAA+AGG | - | chr2_3:39474582-39474601 | None:intergenic | 35.0% | |
| !!! | TTTTTCATCCTGTTGATAGC+AGG | + | chr2_3:39474581-39474600 | Msa0291280:intron | 35.0% |
| AAGAGAGGAAAAGTAGAAGT+AGG | + | chr2_3:39474710-39474729 | Msa0291280:intron | 35.0% | |
| AGAGGTAAAGAAGGAAGAAA+TGG | + | chr2_3:39474943-39474962 | Msa0291280:CDS | 35.0% | |
| GAGGTAAAGAAGGAAGAAAT+GGG | + | chr2_3:39474944-39474963 | Msa0291280:CDS | 35.0% | |
| ACCAAAACTATGAGACTTGT+AGG | + | chr2_3:39475092-39475111 | Msa0291280:CDS | 35.0% | |
| ! | ACCTACAAGTCTCATAGTTT+TGG | - | chr2_3:39475096-39475115 | None:intergenic | 35.0% |
| AGTTCCTAAAGCACAAAACA+AGG | + | chr2_3:39475132-39475151 | Msa0291280:CDS | 35.0% | |
| !!! | GATTCCTTGTTTTGTGCTTT+AGG | - | chr2_3:39475139-39475158 | None:intergenic | 35.0% |
| AGATGATTCTAGTGAAGATG+AGG | + | chr2_3:39475246-39475265 | Msa0291280:CDS | 35.0% | |
| ! | CGTTTTCGTGTGAAAACAAT+TGG | + | chr2_3:39475298-39475317 | Msa0291280:CDS | 35.0% |
| AATGAGAGGTTTCTGATATG+AGG | + | chr2_3:39475335-39475354 | Msa0291280:exon | 35.0% | |
| ! | TGATATGAGGTACCTAGAAA+TGG | + | chr2_3:39475348-39475367 | Msa0291280:three_prime_UTR | 35.0% |
| GTCACTGTTTATGTTCACAA+GGG | - | chr2_3:39475384-39475403 | None:intergenic | 35.0% | |
| TTGAAGATCTACCAATCCTA+GGG | + | chr2_3:39475455-39475474 | Msa0291280:three_prime_UTR | 35.0% | |
| AGTACTTCTACCTGATGATT+TGG | + | chr2_3:39475480-39475499 | Msa0291280:three_prime_UTR | 35.0% | |
| ACTAACTAAACGGTGAATGT+TGG | - | chr2_3:39475534-39475553 | None:intergenic | 35.0% | |
| GAGAGAGAGAGAAAGAAGAA+TGG | - | chr2_3:39472747-39472766 | None:intergenic | 40.0% | |
| !!! | CGAGCAATCCTTTTTTTTCC+CGG | - | chr2_3:39473384-39473403 | None:intergenic | 40.0% |
| AGAGGCTTAGAGCTCAAAAA+GGG | - | chr2_3:39474088-39474107 | None:intergenic | 40.0% | |
| TAGAGGCTTAGAGCTCAAAA+AGG | - | chr2_3:39474089-39474108 | None:intergenic | 40.0% | |
| GGAAGAGAAACTGACAAGAA+AGG | - | chr2_3:39474178-39474197 | None:intergenic | 40.0% | |
| ! | AACAGGATGAAAAAGGGCAT+GGG | - | chr2_3:39474575-39474594 | None:intergenic | 40.0% |
| ACATGAAGATGAGAAGGACA+AGG | + | chr2_3:39474907-39474926 | Msa0291280:CDS | 40.0% | |
| GCTAGAAAGAGAGGTAAAGA+AGG | + | chr2_3:39474934-39474953 | Msa0291280:CDS | 40.0% | |
| ATGCAGCAGCTTCTAATGTT+AGG | + | chr2_3:39474975-39474994 | Msa0291280:CDS | 40.0% | |
| AAAGATCTAAAGGGTCAGCT+TGG | + | chr2_3:39474998-39475017 | Msa0291280:CDS | 40.0% | |
| !! | GGCAAAGGTGTTATCAATGT+TGG | + | chr2_3:39475019-39475038 | Msa0291280:CDS | 40.0% |
| ! | TGGAATCGTTTTCCATGCTT+TGG | - | chr2_3:39475176-39475195 | None:intergenic | 40.0% |
| !!! | GCAGAATGTCCTTTTGGTTT+TGG | - | chr2_3:39475196-39475215 | None:intergenic | 40.0% |
| ACCAAAAGGACATTCTGCTT+TGG | + | chr2_3:39475198-39475217 | Msa0291280:CDS | 40.0% | |
| ! | TCCAAAGCAGAATGTCCTTT+TGG | - | chr2_3:39475202-39475221 | None:intergenic | 40.0% |
| TCAGAAACCTCTCATTTCAC+AGG | - | chr2_3:39475331-39475350 | None:intergenic | 40.0% | |
| GGATCAAAACAGCCATTTCT+AGG | - | chr2_3:39475363-39475382 | None:intergenic | 40.0% | |
| GGTCACTGTTTATGTTCACA+AGG | - | chr2_3:39475385-39475404 | None:intergenic | 40.0% | |
| ACATAAACAGTGACCTCTGA+TGG | + | chr2_3:39475390-39475409 | Msa0291280:three_prime_UTR | 40.0% | |
| CTTGAAGATCTACCAATCCT+AGG | + | chr2_3:39475454-39475473 | Msa0291280:three_prime_UTR | 40.0% | |
| TGAAGATCTACCAATCCTAG+GGG | + | chr2_3:39475456-39475475 | Msa0291280:three_prime_UTR | 40.0% | |
| ACATTGACAGCCAAATCATC+AGG | - | chr2_3:39475493-39475512 | None:intergenic | 40.0% | |
| ! | TGATGATTTGGCTGTCAATG+TGG | + | chr2_3:39475492-39475511 | Msa0291280:three_prime_UTR | 40.0% |
| AGAGATGATGAGGAAGGAGT+TGG | - | chr2_3:39472718-39472737 | None:intergenic | 45.0% | |
| AGTGAGAGAGATGATGAGGA+AGG | - | chr2_3:39472724-39472743 | None:intergenic | 45.0% | |
| ATGGAGTGAGAGAGATGATG+AGG | - | chr2_3:39472728-39472747 | None:intergenic | 45.0% | |
| !!! | AGAGGCGTTAGCGTTTTACA+CGG | + | chr2_3:39472929-39472948 | Msa0291280:CDS | 45.0% |
| TTACACGGACGCTATTGGTA+TGG | + | chr2_3:39472944-39472963 | Msa0291280:CDS | 45.0% | |
| CTATGCAAAGCGATCTTCTG+AGG | - | chr2_3:39472981-39473000 | None:intergenic | 45.0% | |
| ! | AGGTTATTAGCCCCTTTTCC+CGG | + | chr2_3:39473348-39473367 | Msa0291280:intron | 45.0% |
| ATCAGAGGCCGGGAAAAAAA+AGG | + | chr2_3:39473373-39473392 | Msa0291280:intron | 45.0% | |
| GATGGGTGGGCATACAAAAT+AGG | - | chr2_3:39473545-39473564 | None:intergenic | 45.0% | |
| TTTGGCGGAATTCATGGGAT+GGG | - | chr2_3:39473562-39473581 | None:intergenic | 45.0% | |
| ATTTGGCGGAATTCATGGGA+TGG | - | chr2_3:39473563-39473582 | None:intergenic | 45.0% | |
| ! | GAGCTTGATAGCAATCACAG+TGG | + | chr2_3:39474308-39474327 | Msa0291280:CDS | 45.0% |
| TCAAACACTGGTGACACTGA+AGG | + | chr2_3:39474349-39474368 | Msa0291280:CDS | 45.0% | |
| CAACAGGATGAAAAAGGGCA+TGG | - | chr2_3:39474576-39474595 | None:intergenic | 45.0% | |
| TGAGTGTTCCTGCTATCAAC+AGG | - | chr2_3:39474592-39474611 | None:intergenic | 45.0% | |
| TCCAATACCAGAGTCAGAAG+AGG | + | chr2_3:39474874-39474893 | Msa0291280:CDS | 45.0% | |
| TCCTCTTCTGACTCTGGTAT+TGG | - | chr2_3:39474878-39474897 | None:intergenic | 45.0% | |
| CGAGGAACATGAAGATGAGA+AGG | + | chr2_3:39474901-39474920 | Msa0291280:CDS | 45.0% | |
| !! | AACCTGGGGTCTGTTAGTTT+TGG | - | chr2_3:39475052-39475071 | None:intergenic | 45.0% |
| CCAGTTTGGATGAAAACCTG+GGG | - | chr2_3:39475066-39475085 | None:intergenic | 45.0% | |
| CCCAGTTTGGATGAAAACCT+GGG | - | chr2_3:39475067-39475086 | None:intergenic | 45.0% | |
| ! | CCCAGGTTTTCATCCAAACT+GGG | + | chr2_3:39475064-39475083 | Msa0291280:CDS | 45.0% |
| TCCCAGTTTGGATGAAAACC+TGG | - | chr2_3:39475068-39475087 | None:intergenic | 45.0% | |
| !! | GTTTTGGTCACTTCCCAGTT+TGG | - | chr2_3:39475080-39475099 | None:intergenic | 45.0% |
| ! | CCATGCTTTGGATTGTTGCT+CGG | - | chr2_3:39475164-39475183 | None:intergenic | 45.0% |
| ! | ATTCTGCTTTGGACTACGCT+CGG | + | chr2_3:39475209-39475228 | Msa0291280:CDS | 45.0% |
| TTCACACGAAAACGGTACTG+TGG | - | chr2_3:39475292-39475311 | None:intergenic | 45.0% | |
| TGTACGTCCTGTGAAATGAG+AGG | + | chr2_3:39475321-39475340 | Msa0291280:exon | 45.0% | |
| ! | TGACCTCTGATGGACAAGAA+TGG | + | chr2_3:39475400-39475419 | Msa0291280:three_prime_UTR | 45.0% |
| TGTCCATTCTTGTCCATCAG+AGG | - | chr2_3:39475406-39475425 | None:intergenic | 45.0% | |
| ! | TCTGATGGACAAGAATGGAC+AGG | + | chr2_3:39475405-39475424 | Msa0291280:three_prime_UTR | 45.0% |
| !! | AGAAGTACTTCCCCTAGGAT+TGG | - | chr2_3:39475469-39475488 | None:intergenic | 45.0% |
| !! | TGAATGTTGGTAGCTTCGGA+GGG | - | chr2_3:39475521-39475540 | None:intergenic | 45.0% |
| !! | ACGGTGAATGTTGGTAGCTT+CGG | - | chr2_3:39475525-39475544 | None:intergenic | 45.0% |
| GGCTCATATATGGTGCTCAA+TGG | + | chr2_3:39475597-39475616 | Msa0291280:three_prime_UTR | 45.0% | |
| CCTCTTTGTAGAGTCCGTCA+CGG | - | chr2_3:39472914-39472933 | None:intergenic | 50.0% | |
| ! | GCGTTTTACACGGACGCTAT+TGG | + | chr2_3:39472939-39472958 | Msa0291280:CDS | 50.0% |
| ! | GAGGTTCGGTTAGACTCAAG+TGG | + | chr2_3:39473229-39473248 | Msa0291280:intron | 50.0% |
| ! | GGTTATTAGCCCCTTTTCCC+GGG | + | chr2_3:39473349-39473368 | Msa0291280:intron | 50.0% |
| AAAAGGATTGCTCGAGAGGG+AGG | + | chr2_3:39473390-39473409 | Msa0291280:intron | 50.0% | |
| AAAGGATTGCTCGAGAGGGA+GGG | + | chr2_3:39473391-39473410 | Msa0291280:intron | 50.0% | |
| ! | CTCGAGAGGGAGGGAATTTT+TGG | + | chr2_3:39473400-39473419 | Msa0291280:intron | 50.0% |
| CCGCATTTGGCGGAATTCAT+GGG | - | chr2_3:39473567-39473586 | None:intergenic | 50.0% | |
| CCCATGAATTCCGCCAAATG+CGG | + | chr2_3:39473564-39473583 | Msa0291280:intron | 50.0% | |
| TCCGCATTTGGCGGAATTCA+TGG | - | chr2_3:39473568-39473587 | None:intergenic | 50.0% | |
| CTCTGTTCTCACCTGCGAAT+TGG | + | chr2_3:39474018-39474037 | Msa0291280:intron | 50.0% | |
| GTATGCAAGCACCAATTCGC+AGG | - | chr2_3:39474032-39474051 | None:intergenic | 50.0% | |
| !! | ACAGTGGAGCATTGATGCTG+AGG | + | chr2_3:39474324-39474343 | Msa0291280:CDS | 50.0% |
| !! | CAGTGGAGCATTGATGCTGA+GGG | + | chr2_3:39474325-39474344 | Msa0291280:CDS | 50.0% |
| TGCTCGCTTGAAGACACAGT+TGG | + | chr2_3:39474448-39474467 | Msa0291280:CDS | 50.0% | |
| TCGAACTCCTCTTCTGACTC+TGG | - | chr2_3:39474884-39474903 | None:intergenic | 50.0% | |
| AGAGTCAGAAGAGGAGTTCG+AGG | + | chr2_3:39474883-39474902 | Msa0291280:CDS | 50.0% | |
| CAAGGCGATGCTAGAAAGAG+AGG | + | chr2_3:39474925-39474944 | Msa0291280:CDS | 50.0% | |
| CTAAAGGGTCAGCTTGGCAA+AGG | + | chr2_3:39475004-39475023 | Msa0291280:CDS | 50.0% | |
| CTCCAAAACTAACAGACCCC+AGG | + | chr2_3:39475047-39475066 | Msa0291280:CDS | 50.0% | |
| ! | CCCCAGGTTTTCATCCAAAC+TGG | + | chr2_3:39475063-39475082 | Msa0291280:CDS | 50.0% |
| CCGAGCAACAATCCAAAGCA+TGG | + | chr2_3:39475161-39475180 | Msa0291280:CDS | 50.0% | |
| !! | CAGGTAGAAGTACTTCCCCT+AGG | - | chr2_3:39475474-39475493 | None:intergenic | 50.0% |
| !! | GTGAATGTTGGTAGCTTCGG+AGG | - | chr2_3:39475522-39475541 | None:intergenic | 50.0% |
| TATATGAGCCTCAGCAGGCA+TGG | - | chr2_3:39475587-39475606 | None:intergenic | 50.0% | |
| TGCCTGCTGAGGCTCATATA+TGG | + | chr2_3:39475587-39475606 | Msa0291280:three_prime_UTR | 50.0% | |
| CACCATATATGAGCCTCAGC+AGG | - | chr2_3:39475592-39475611 | None:intergenic | 50.0% | |
| GCGACGAACAAGATCGAACG+CGG | + | chr2_3:39472876-39472895 | Msa0291280:CDS | 55.0% | |
| GGTCACCAGATGTACCGTGA+CGG | + | chr2_3:39472897-39472916 | Msa0291280:CDS | 55.0% | |
| AGAGTCCGTCACGGTACATC+TGG | - | chr2_3:39472905-39472924 | None:intergenic | 55.0% | |
| !! | CCGTGACGGACTCTACAAAG+AGG | + | chr2_3:39472911-39472930 | Msa0291280:CDS | 55.0% |
| CCTCTGATTCCCGGGAAAAG+GGG | - | chr2_3:39473361-39473380 | None:intergenic | 55.0% | |
| GCCTCTGATTCCCGGGAAAA+GGG | - | chr2_3:39473362-39473381 | None:intergenic | 55.0% | |
| ! | TTTTCCCGGGAATCAGAGGC+CGG | + | chr2_3:39473362-39473381 | Msa0291280:intron | 55.0% |
| ! | TTTTCCCGGCCTCTGATTCC+CGG | - | chr2_3:39473370-39473389 | None:intergenic | 55.0% |
| GCGGAATTCATGGGATGGGT+GGG | - | chr2_3:39473558-39473577 | None:intergenic | 55.0% | |
| GATGCTGAGGGCTCAAACAC+TGG | + | chr2_3:39474337-39474356 | Msa0291280:CDS | 55.0% | |
| ! | TGCTTTGGACTACGCTCGGT+GGG | + | chr2_3:39475213-39475232 | Msa0291280:CDS | 55.0% |
| GTTTCTCACCATGCCTGCTG+AGG | + | chr2_3:39475576-39475595 | Msa0291280:three_prime_UTR | 55.0% | |
| ! | CCCCTTTTCCCGGGAATCAG+AGG | + | chr2_3:39473358-39473377 | Msa0291280:intron | 60.0% |
| GGCCTCTGATTCCCGGGAAA+AGG | - | chr2_3:39473363-39473382 | None:intergenic | 60.0% | |
| TTTCCCGGGAATCAGAGGCC+GGG | + | chr2_3:39473363-39473382 | Msa0291280:intron | 60.0% | |
| TTTCCCGGCCTCTGATTCCC+GGG | - | chr2_3:39473369-39473388 | None:intergenic | 60.0% | |
| GGCGGAATTCATGGGATGGG+TGG | - | chr2_3:39473559-39473578 | None:intergenic | 60.0% | |
| ! | CTGCTTTGGACTACGCTCGG+TGG | + | chr2_3:39475212-39475231 | Msa0291280:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 39472659 | 39475698 | 39472659 | ID=Msa0291280;Name=Msa0291280 |
| chr2_3 | mRNA | 39472659 | 39475698 | 39472659 | ID=Msa0291280-mRNA-1;Parent=Msa0291280;Name=Msa0291280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=214|1|1|1|1|1|3|359|277 |
| chr2_3 | exon | 39472659 | 39473043 | 39472659 | ID=Msa0291280-mRNA-1:exon:12775;Parent=Msa0291280-mRNA-1 |
| chr2_3 | exon | 39474281 | 39474469 | 39474281 | ID=Msa0291280-mRNA-1:exon:12776;Parent=Msa0291280-mRNA-1 |
| chr2_3 | exon | 39474866 | 39475698 | 39474866 | ID=Msa0291280-mRNA-1:exon:12777;Parent=Msa0291280-mRNA-1 |
| chr2_3 | five_prime_UTR | 39472659 | 39472872 | 39472659 | ID=Msa0291280-mRNA-1:five_prime_utr;Parent=Msa0291280-mRNA-1 |
| chr2_3 | CDS | 39472873 | 39473043 | 39472873 | ID=Msa0291280-mRNA-1:cds;Parent=Msa0291280-mRNA-1 |
| chr2_3 | CDS | 39474281 | 39474469 | 39474281 | ID=Msa0291280-mRNA-1:cds;Parent=Msa0291280-mRNA-1 |
| chr2_3 | CDS | 39474866 | 39475339 | 39474866 | ID=Msa0291280-mRNA-1:cds;Parent=Msa0291280-mRNA-1 |
| chr2_3 | three_prime_UTR | 39475340 | 39475698 | 39475340 | ID=Msa0291280-mRNA-1:three_prime_utr;Parent=Msa0291280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
