Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408050 | XP_013451595.1 | 98.643 | 442 | 6 | 0 | 1 | 442 | 1 | 442 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408050 | sp|Q8RWF4|NIPA8_ARATH | 75.000 | 436 | 104 | 3 | 1 | 433 | 1 | 434 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408050 | A0A072U945 | 98.643 | 442 | 6 | 0 | 1 | 442 | 1 | 442 | 0.0 | 890 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002710 | Msa1408050 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0007990 | Msa1408050 | 0.815579 | 8.599370e-52 | -8.615850e-47 |
| Msa0012710 | Msa1408050 | 0.808554 | 2.925376e-50 | -8.615850e-47 |
| Msa0017320 | Msa1408050 | 0.802322 | 5.928639e-49 | -8.615850e-47 |
| Msa0022550 | Msa1408050 | 0.807351 | 5.273434e-50 | -8.615850e-47 |
| Msa0026910 | Msa1408050 | 0.808580 | 2.888041e-50 | -8.615850e-47 |
| Msa0030160 | Msa1408050 | 0.822990 | 1.762183e-53 | -8.615850e-47 |
| Msa0032080 | Msa1408050 | 0.801278 | 9.710241e-49 | -8.615850e-47 |
| Msa0032470 | Msa1408050 | 0.825146 | 5.496115e-54 | -8.615850e-47 |
| Msa0033850 | Msa1408050 | 0.848776 | 4.941130e-60 | -8.615850e-47 |
| Msa0042550 | Msa1408050 | 0.812579 | 3.950037e-51 | -8.615850e-47 |
| Msa0043500 | Msa1408050 | 0.821451 | 4.010661e-53 | -8.615850e-47 |
| Msa0043530 | Msa1408050 | 0.804053 | 2.597756e-49 | -8.615850e-47 |
| Msa0043650 | Msa1408050 | 0.817724 | 2.842923e-52 | -8.615850e-47 |
| Msa0045790 | Msa1408050 | 0.814803 | 1.278959e-51 | -8.615850e-47 |
| Msa0046160 | Msa1408050 | 0.812959 | 3.260139e-51 | -8.615850e-47 |
| Msa0051740 | Msa1408050 | 0.809031 | 2.313093e-50 | -8.615850e-47 |
| Msa0055070 | Msa1408050 | 0.842931 | 1.913150e-58 | -8.615850e-47 |
| Msa0060070 | Msa1408050 | 0.816964 | 4.215782e-52 | -8.615850e-47 |
| Msa0061500 | Msa1408050 | 0.831106 | 2.014934e-55 | -8.615850e-47 |
| Msa0064140 | Msa1408050 | 0.800510 | 1.393298e-48 | -8.615850e-47 |
| Msa0065650 | Msa1408050 | 0.806286 | 8.854990e-50 | -8.615850e-47 |
| Msa0078640 | Msa1408050 | 0.802193 | 6.300955e-49 | -8.615850e-47 |
| Msa0081620 | Msa1408050 | 0.863788 | 1.937817e-64 | -8.615850e-47 |
| Msa0081630 | Msa1408050 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa0081650 | Msa1408050 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa0092410 | Msa1408050 | 0.867149 | 1.693327e-65 | -8.615850e-47 |
| Msa0100160 | Msa1408050 | 0.805482 | 1.306877e-49 | -8.615850e-47 |
| Msa0101020 | Msa1408050 | 0.843326 | 1.500975e-58 | -8.615850e-47 |
| Msa0103250 | Msa1408050 | 0.835881 | 1.295749e-56 | -8.615850e-47 |
| Msa0104230 | Msa1408050 | 0.838781 | 2.345519e-57 | -8.615850e-47 |
| Msa0106620 | Msa1408050 | 0.836339 | 9.918618e-57 | -8.615850e-47 |
| Msa0106710 | Msa1408050 | 0.835467 | 1.649848e-56 | -8.615850e-47 |
| Msa0111080 | Msa1408050 | 0.825385 | 4.825559e-54 | -8.615850e-47 |
| Msa0112270 | Msa1408050 | 0.819343 | 1.220602e-52 | -8.615850e-47 |
| Msa0119440 | Msa1408050 | 0.814390 | 1.578691e-51 | -8.615850e-47 |
| Msa1345940 | Msa1408050 | 0.830232 | 3.298528e-55 | -8.615850e-47 |
| Msa1346840 | Msa1408050 | 0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa1349450 | Msa1408050 | 0.809809 | 1.574703e-50 | -8.615850e-47 |
| Msa1353890 | Msa1408050 | 0.838843 | 2.260658e-57 | -8.615850e-47 |
| Msa1355890 | Msa1408050 | 0.827235 | 1.749863e-54 | -8.615850e-47 |
| Msa1359560 | Msa1408050 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa1360020 | Msa1408050 | 0.846057 | 2.758987e-59 | -8.615850e-47 |
| Msa1365270 | Msa1408050 | 0.827610 | 1.422644e-54 | -8.615850e-47 |
| Msa1365610 | Msa1408050 | 0.997994 | 1.136226e-253 | -8.615850e-47 |
| Msa1368430 | Msa1408050 | 0.807489 | 4.930998e-50 | -8.615850e-47 |
| Msa1370590 | Msa1408050 | 0.823151 | 1.616420e-53 | -8.615850e-47 |
| Msa1372150 | Msa1408050 | 0.825464 | 4.622591e-54 | -8.615850e-47 |
| Msa1372280 | Msa1408050 | 0.827554 | 1.467424e-54 | -8.615850e-47 |
| Msa1376450 | Msa1408050 | 0.842383 | 2.673997e-58 | -8.615850e-47 |
| Msa1378680 | Msa1408050 | 0.812706 | 3.704065e-51 | -8.615850e-47 |
| Msa1380220 | Msa1408050 | 0.806437 | 8.228059e-50 | -8.615850e-47 |
| Msa1380400 | Msa1408050 | 0.851898 | 6.574473e-61 | -8.615850e-47 |
| Msa1380900 | Msa1408050 | 0.810099 | 1.363946e-50 | -8.615850e-47 |
| Msa1382790 | Msa1408050 | 0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa1383230 | Msa1408050 | 0.808497 | 3.008882e-50 | -8.615850e-47 |
| Msa1384100 | Msa1408050 | 0.822821 | 1.929648e-53 | -8.615850e-47 |
| Msa1391550 | Msa1408050 | 0.826106 | 3.253720e-54 | -8.615850e-47 |
| Msa1394380 | Msa1408050 | 0.815005 | 1.153566e-51 | -8.615850e-47 |
| Msa1400120 | Msa1408050 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa1401990 | Msa1408050 | 0.809754 | 1.618365e-50 | -8.615850e-47 |
| Msa1405220 | Msa1408050 | 0.884434 | 1.923993e-71 | -8.615850e-47 |
| Msa1407190 | Msa1408050 | 0.839095 | 1.945348e-57 | -8.615850e-47 |
| Msa1408050 | Msa1409490 | 0.835477 | 1.639948e-56 | -8.615850e-47 |
| Msa1408050 | Msa1418280 | 0.835449 | 1.666869e-56 | -8.615850e-47 |
| Msa1408050 | Msa1421990 | 0.800801 | 1.215632e-48 | -8.615850e-47 |
| Msa1408050 | Msa1424630 | 0.843628 | 1.246334e-58 | -8.615850e-47 |
| Msa1408050 | Msa1428780 | 0.808179 | 3.516471e-50 | -8.615850e-47 |
| Msa1408050 | Msa1430130 | 0.804796 | 1.818419e-49 | -8.615850e-47 |
| Msa1408050 | Msa1430550 | 0.860141 | 2.539865e-63 | -8.615850e-47 |
| Msa1408050 | Msa1432130 | 0.854662 | 1.059869e-61 | -8.615850e-47 |
| Msa1408050 | Msa1436480 | 0.807840 | 4.153354e-50 | -8.615850e-47 |
| Msa1408050 | Msa1436600 | 0.800347 | 1.503787e-48 | -8.615850e-47 |
| Msa1408050 | Msa1437730 | 0.801417 | 9.093125e-49 | -8.615850e-47 |
| Msa1408050 | Msa1442790 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa1408050 | Msa1442920 | 0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa1408050 | Msa1444120 | 0.826749 | 2.286693e-54 | -8.615850e-47 |
| Msa1408050 | Msa1448560 | 0.817875 | 2.628158e-52 | -8.615850e-47 |
| Msa1408050 | Msa1457160 | 0.816357 | 5.765939e-52 | -8.615850e-47 |
| Msa1408050 | Msa1458340 | 0.845911 | 3.021763e-59 | -8.615850e-47 |
| Msa1408050 | Msa1460750 | 0.804742 | 1.866700e-49 | -8.615850e-47 |
| Msa1408050 | Msa1462360 | 0.840400 | 8.894532e-58 | -8.615850e-47 |
| Msa1408050 | Msa1463900 | 0.807471 | 4.974765e-50 | -8.615850e-47 |
| Msa0607520 | Msa1408050 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa0610250 | Msa1408050 | 0.832449 | 9.391592e-56 | -8.615850e-47 |
| Msa0613110 | Msa1408050 | 0.822525 | 2.261198e-53 | -8.615850e-47 |
| Msa0613340 | Msa1408050 | 0.838748 | 2.391690e-57 | -8.615850e-47 |
| Msa0614920 | Msa1408050 | 0.828565 | 8.377734e-55 | -8.615850e-47 |
| Msa0616450 | Msa1408050 | 0.800844 | 1.190912e-48 | -8.615850e-47 |
| Msa0618970 | Msa1408050 | 0.801808 | 7.560195e-49 | -8.615850e-47 |
| Msa0622170 | Msa1408050 | -0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0641340 | Msa1408050 | 0.803565 | 3.280416e-49 | -8.615850e-47 |
| Msa0652690 | Msa1408050 | 0.815531 | 8.813783e-52 | -8.615850e-47 |
| Msa0655920 | Msa1408050 | 0.816091 | 6.611036e-52 | -8.615850e-47 |
| Msa0656000 | Msa1408050 | 0.801850 | 7.412836e-49 | -8.615850e-47 |
| Msa0658680 | Msa1408050 | 0.800207 | 1.605721e-48 | -8.615850e-47 |
| Msa0662940 | Msa1408050 | 0.803942 | 2.740363e-49 | -8.615850e-47 |
| Msa0667740 | Msa1408050 | 0.810808 | 9.586998e-51 | -8.615850e-47 |
| Msa0667770 | Msa1408050 | 0.819197 | 1.317647e-52 | -8.615850e-47 |
| Msa0667790 | Msa1408050 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
| Msa0673120 | Msa1408050 | 0.823133 | 1.631807e-53 | -8.615850e-47 |
| Msa0682070 | Msa1408050 | 0.808853 | 2.524616e-50 | -8.615850e-47 |
| Msa0689250 | Msa1408050 | 0.844690 | 6.466581e-59 | -8.615850e-47 |
| Msa0695870 | Msa1408050 | 0.820222 | 7.686016e-53 | -8.615850e-47 |
| Msa0697590 | Msa1408050 | 0.822895 | 1.854255e-53 | -8.615850e-47 |
| Msa0703440 | Msa1408050 | 0.813249 | 2.816379e-51 | -8.615850e-47 |
| Msa0703780 | Msa1408050 | 0.802803 | 4.717915e-49 | -8.615850e-47 |
| Msa0705990 | Msa1408050 | 0.804187 | 2.436094e-49 | -8.615850e-47 |
| Msa0708310 | Msa1408050 | 0.849190 | 3.791303e-60 | -8.615850e-47 |
| Msa0710270 | Msa1408050 | 0.807746 | 4.347142e-50 | -8.615850e-47 |
| Msa0711150 | Msa1408050 | 0.823593 | 1.273982e-53 | -8.615850e-47 |
| Msa0715420 | Msa1408050 | 0.826579 | 2.510251e-54 | -8.615850e-47 |
| Msa0721340 | Msa1408050 | 0.839732 | 1.329148e-57 | -8.615850e-47 |
| Msa0738030 | Msa1408050 | 0.812482 | 4.146974e-51 | -8.615850e-47 |
| Msa0741070 | Msa1408050 | 0.814241 | 1.702697e-51 | -8.615850e-47 |
| Msa0750250 | Msa1408050 | 0.822919 | 1.830457e-53 | -8.615850e-47 |
| Msa0750810 | Msa1408050 | 0.840559 | 8.083696e-58 | -8.615850e-47 |
| Msa0779260 | Msa1408050 | 0.821781 | 3.364121e-53 | -8.615850e-47 |
| Msa0784480 | Msa1408050 | 0.822702 | 2.056684e-53 | -8.615850e-47 |
| Msa0786750 | Msa1408050 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0795070 | Msa1408050 | 0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0797250 | Msa1408050 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0811040 | Msa1408050 | 0.809962 | 1.459757e-50 | -8.615850e-47 |
| Msa0813260 | Msa1408050 | 0.801491 | 8.782838e-49 | -8.615850e-47 |
| Msa0818060 | Msa1408050 | 0.818632 | 1.771629e-52 | -8.615850e-47 |
| Msa0822500 | Msa1408050 | 0.818254 | 2.157464e-52 | -8.615850e-47 |
| Msa0828240 | Msa1408050 | 0.815471 | 9.091122e-52 | -8.615850e-47 |
| Msa0831850 | Msa1408050 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
| Msa0835800 | Msa1408050 | 0.809248 | 2.078651e-50 | -8.615850e-47 |
| Msa0125650 | Msa1408050 | 0.835188 | 1.940817e-56 | -8.615850e-47 |
| Msa0136630 | Msa1408050 | 0.817594 | 3.041109e-52 | -8.615850e-47 |
| Msa0137800 | Msa1408050 | 0.822677 | 2.084191e-53 | -8.615850e-47 |
| Msa0138020 | Msa1408050 | 0.819316 | 1.238328e-52 | -8.615850e-47 |
| Msa0138750 | Msa1408050 | 0.803435 | 3.490483e-49 | -8.615850e-47 |
| Msa0139000 | Msa1408050 | 0.835262 | 1.859133e-56 | -8.615850e-47 |
| Msa0145110 | Msa1408050 | 0.829583 | 4.746656e-55 | -8.615850e-47 |
| Msa0149300 | Msa1408050 | 0.822121 | 2.805898e-53 | -8.615850e-47 |
| Msa0150230 | Msa1408050 | 0.803180 | 3.943036e-49 | -8.615850e-47 |
| Msa0152560 | Msa1408050 | 0.828077 | 1.098213e-54 | -8.615850e-47 |
| Msa0154920 | Msa1408050 | 0.812007 | 5.264167e-51 | -8.615850e-47 |
| Msa0160960 | Msa1408050 | 0.827104 | 1.881072e-54 | -8.615850e-47 |
| Msa0162690 | Msa1408050 | 0.827666 | 1.379252e-54 | -8.615850e-47 |
| Msa0168870 | Msa1408050 | 0.821497 | 3.912508e-53 | -8.615850e-47 |
| Msa0173960 | Msa1408050 | 0.847291 | 1.269160e-59 | -8.615850e-47 |
| Msa0178510 | Msa1408050 | 0.830458 | 2.903621e-55 | -8.615850e-47 |
| Msa0179110 | Msa1408050 | 0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0186320 | Msa1408050 | 0.823167 | 1.602567e-53 | -8.615850e-47 |
| Msa0186950 | Msa1408050 | 0.842631 | 2.298400e-58 | -8.615850e-47 |
| Msa0187030 | Msa1408050 | 0.813467 | 2.522441e-51 | -8.615850e-47 |
| Msa0187830 | Msa1408050 | 0.851520 | 8.412692e-61 | -8.615850e-47 |
| Msa0189040 | Msa1408050 | 0.804886 | 1.741586e-49 | -8.615850e-47 |
| Msa0190530 | Msa1408050 | 0.804049 | 2.603319e-49 | -8.615850e-47 |
| Msa0200650 | Msa1408050 | 0.802699 | 4.957362e-49 | -8.615850e-47 |
| Msa0201570 | Msa1408050 | 0.848932 | 4.472926e-60 | -8.615850e-47 |
| Msa0202930 | Msa1408050 | 0.835637 | 1.494283e-56 | -8.615850e-47 |
| Msa0204840 | Msa1408050 | 0.813710 | 2.230194e-51 | -8.615850e-47 |
| Msa0205010 | Msa1408050 | 0.811439 | 6.996914e-51 | -8.615850e-47 |
| Msa0215590 | Msa1408050 | 0.831894 | 1.288593e-55 | -8.615850e-47 |
| Msa0217700 | Msa1408050 | 0.827305 | 1.683817e-54 | -8.615850e-47 |
| Msa0219590 | Msa1408050 | 0.814152 | 1.781899e-51 | -8.615850e-47 |
| Msa0225220 | Msa1408050 | 0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0227340 | Msa1408050 | 0.814700 | 1.348150e-51 | -8.615850e-47 |
| Msa0231060 | Msa1408050 | 0.800195 | 1.615107e-48 | -8.615850e-47 |
| Msa0233290 | Msa1408050 | 0.813891 | 2.034974e-51 | -8.615850e-47 |
| Msa0234090 | Msa1408050 | 0.807513 | 4.871895e-50 | -8.615850e-47 |
| Msa0236070 | Msa1408050 | 0.818767 | 1.650728e-52 | -8.615850e-47 |
| Msa1225100 | Msa1408050 | 0.886851 | 2.385552e-72 | -8.615850e-47 |
| Msa1235390 | Msa1408050 | 0.825931 | 3.582164e-54 | -8.615850e-47 |
| Msa1236440 | Msa1408050 | 0.831313 | 1.791373e-55 | -8.615850e-47 |
| Msa1243870 | Msa1408050 | 0.817789 | 2.748890e-52 | -8.615850e-47 |
| Msa1246360 | Msa1408050 | 0.829930 | 3.906262e-55 | -8.615850e-47 |
| Msa1246700 | Msa1408050 | 0.841242 | 5.350708e-58 | -8.615850e-47 |
| Msa1259860 | Msa1408050 | 0.802436 | 5.615678e-49 | -8.615850e-47 |
| Msa1260680 | Msa1408050 | 0.836781 | 7.653512e-57 | -8.615850e-47 |
| Msa1262010 | Msa1408050 | 0.827700 | 1.353797e-54 | -8.615850e-47 |
| Msa1262020 | Msa1408050 | 0.830693 | 2.543552e-55 | -8.615850e-47 |
| Msa1266490 | Msa1408050 | 0.830211 | 3.336150e-55 | -8.615850e-47 |
| Msa1277670 | Msa1408050 | 0.825400 | 4.785009e-54 | -8.615850e-47 |
| Msa1279480 | Msa1408050 | 0.819370 | 1.203707e-52 | -8.615850e-47 |
| Msa1280150 | Msa1408050 | 0.840629 | 7.749243e-58 | -8.615850e-47 |
| Msa1291450 | Msa1408050 | 0.816413 | 5.602800e-52 | -8.615850e-47 |
| Msa1291830 | Msa1408050 | 0.807179 | 5.736606e-50 | -8.615850e-47 |
| Msa1307180 | Msa1408050 | 0.809117 | 2.217438e-50 | -8.615850e-47 |
| Msa1307550 | Msa1408050 | 0.802524 | 5.384563e-49 | -8.615850e-47 |
| Msa1319820 | Msa1408050 | 0.801888 | 7.278517e-49 | -8.615850e-47 |
| Msa1329870 | Msa1408050 | 0.886579 | 3.024604e-72 | -8.615850e-47 |
| Msa1330180 | Msa1408050 | 0.822888 | 1.861517e-53 | -8.615850e-47 |
| Msa1332760 | Msa1408050 | 0.809207 | 2.121257e-50 | -8.615850e-47 |
| Msa1334490 | Msa1408050 | 0.828419 | 9.084774e-55 | -8.615850e-47 |
| Msa0364790 | Msa1408050 | 0.812140 | 4.923875e-51 | -8.615850e-47 |
| Msa0369920 | Msa1408050 | 0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa0371950 | Msa1408050 | 0.806452 | 8.171314e-50 | -8.615850e-47 |
| Msa0378970 | Msa1408050 | 0.820223 | 7.685098e-53 | -8.615850e-47 |
| Msa0382370 | Msa1408050 | 0.811525 | 6.703490e-51 | -8.615850e-47 |
| Msa0382490 | Msa1408050 | 0.814488 | 1.501594e-51 | -8.615850e-47 |
| Msa0386010 | Msa1408050 | 0.823319 | 1.476367e-53 | -8.615850e-47 |
| Msa0389210 | Msa1408050 | 0.821175 | 4.643477e-53 | -8.615850e-47 |
| Msa0393620 | Msa1408050 | 0.820202 | 7.767231e-53 | -8.615850e-47 |
| Msa0394470 | Msa1408050 | 0.828930 | 6.835793e-55 | -8.615850e-47 |
| Msa0395750 | Msa1408050 | 0.804001 | 2.663808e-49 | -8.615850e-47 |
| Msa0408340 | Msa1408050 | 0.819511 | 1.117862e-52 | -8.615850e-47 |
| Msa0417330 | Msa1408050 | 0.824582 | 7.467271e-54 | -8.615850e-47 |
| Msa0422180 | Msa1408050 | 0.868908 | 4.601039e-66 | -8.615850e-47 |
| Msa0423860 | Msa1408050 | 0.804121 | 2.515385e-49 | -8.615850e-47 |
| Msa0428580 | Msa1408050 | 0.808212 | 3.459795e-50 | -8.615850e-47 |
| Msa0432160 | Msa1408050 | 0.847006 | 1.518976e-59 | -8.615850e-47 |
| Msa0432670 | Msa1408050 | 0.845875 | 3.090390e-59 | -8.615850e-47 |
| Msa0468320 | Msa1408050 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
| Msa0474940 | Msa1408050 | 0.811890 | 5.582730e-51 | -8.615850e-47 |
| Msa0476680 | Msa1408050 | 0.844266 | 8.410984e-59 | -8.615850e-47 |
| Msa0480780 | Msa1408050 | 0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0981040 | Msa1408050 | 0.808747 | 2.660334e-50 | -8.615850e-47 |
| Msa0982780 | Msa1408050 | 0.800600 | 1.335541e-48 | -8.615850e-47 |
| Msa0994910 | Msa1408050 | 0.800037 | 1.738914e-48 | -8.615850e-47 |
| Msa0999680 | Msa1408050 | 0.820929 | 5.288667e-53 | -8.615850e-47 |
| Msa1001390 | Msa1408050 | 0.830685 | 2.555650e-55 | -8.615850e-47 |
| Msa1008750 | Msa1408050 | 0.817503 | 3.187553e-52 | -8.615850e-47 |
| Msa1011090 | Msa1408050 | 0.807063 | 6.070732e-50 | -8.615850e-47 |
| Msa1028590 | Msa1408050 | 0.802331 | 5.903550e-49 | -8.615850e-47 |
| Msa1034500 | Msa1408050 | 0.824752 | 6.809294e-54 | -8.615850e-47 |
| Msa1034700 | Msa1408050 | 0.837379 | 5.382176e-57 | -8.615850e-47 |
| Msa1038060 | Msa1408050 | 0.806459 | 8.143124e-50 | -8.615850e-47 |
| Msa1039710 | Msa1408050 | -0.811525 | 6.703490e-51 | -8.615850e-47 |
| Msa1043120 | Msa1408050 | 0.829248 | 5.724297e-55 | -8.615850e-47 |
| Msa1043330 | Msa1408050 | 0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa1043420 | Msa1408050 | 0.801959 | 7.037740e-49 | -8.615850e-47 |
| Msa1043480 | Msa1408050 | 0.808876 | 2.496567e-50 | -8.615850e-47 |
| Msa1063420 | Msa1408050 | 0.828440 | 8.980290e-55 | -8.615850e-47 |
| Msa1063690 | Msa1408050 | 0.801753 | 7.761007e-49 | -8.615850e-47 |
| Msa1065010 | Msa1408050 | 0.825490 | 4.556675e-54 | -8.615850e-47 |
| Msa1076960 | Msa1408050 | 0.814690 | 1.355260e-51 | -8.615850e-47 |
| Msa1080960 | Msa1408050 | 0.866448 | 2.829519e-65 | -8.615850e-47 |
| Msa1089450 | Msa1408050 | 0.808081 | 3.689346e-50 | -8.615850e-47 |
| Msa1096070 | Msa1408050 | 0.831696 | 1.441789e-55 | -8.615850e-47 |
| Msa1101090 | Msa1408050 | 0.808302 | 3.311247e-50 | -8.615850e-47 |
| Msa1104560 | Msa1408050 | 0.804440 | 2.157736e-49 | -8.615850e-47 |
| Msa0240270 | Msa1408050 | 0.860311 | 2.257000e-63 | -8.615850e-47 |
| Msa0240900 | Msa1408050 | 0.804303 | 2.304635e-49 | -8.615850e-47 |
| Msa0241140 | Msa1408050 | 0.818165 | 2.260364e-52 | -8.615850e-47 |
| Msa0244140 | Msa1408050 | 0.803836 | 2.882114e-49 | -8.615850e-47 |
| Msa0244190 | Msa1408050 | 0.824864 | 6.406330e-54 | -8.615850e-47 |
| Msa0255850 | Msa1408050 | 0.823475 | 1.358135e-53 | -8.615850e-47 |
| Msa0264830 | Msa1408050 | 0.824498 | 7.811439e-54 | -8.615850e-47 |
| Msa0267790 | Msa1408050 | 0.818488 | 1.909209e-52 | -8.615850e-47 |
| Msa0269560 | Msa1408050 | 0.856448 | 3.194702e-62 | -8.615850e-47 |
| Msa0271550 | Msa1408050 | 0.823022 | 1.731892e-53 | -8.615850e-47 |
| Msa0277410 | Msa1408050 | 0.814152 | 1.781899e-51 | -8.615850e-47 |
| Msa0282720 | Msa1408050 | 0.846163 | 2.580562e-59 | -8.615850e-47 |
| Msa0284450 | Msa1408050 | 0.847936 | 8.436065e-60 | -8.615850e-47 |
| Msa0291280 | Msa1408050 | 0.807367 | 5.231982e-50 | -8.615850e-47 |
| Msa0302870 | Msa1408050 | 0.818438 | 1.959929e-52 | -8.615850e-47 |
| Msa0307310 | Msa1408050 | 0.813361 | 2.661167e-51 | -8.615850e-47 |
| Msa0310440 | Msa1408050 | 0.830235 | 3.291562e-55 | -8.615850e-47 |
| Msa0311610 | Msa1408050 | 0.824237 | 9.000091e-54 | -8.615850e-47 |
| Msa0312530 | Msa1408050 | 0.803014 | 4.267407e-49 | -8.615850e-47 |
| Msa0315690 | Msa1408050 | 0.809447 | 1.884064e-50 | -8.615850e-47 |
| Msa0317730 | Msa1408050 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0317970 | Msa1408050 | 0.823668 | 1.223379e-53 | -8.615850e-47 |
| Msa0319290 | Msa1408050 | 0.809652 | 1.702182e-50 | -8.615850e-47 |
| Msa0322680 | Msa1408050 | 0.845126 | 4.932838e-59 | -8.615850e-47 |
| Msa0333650 | Msa1408050 | 0.837487 | 5.049032e-57 | -8.615850e-47 |
| Msa0340340 | Msa1408050 | 0.822180 | 2.719353e-53 | -8.615850e-47 |
| Msa0342010 | Msa1408050 | 0.821781 | 3.364737e-53 | -8.615850e-47 |
| Msa0347750 | Msa1408050 | 0.840383 | 8.989444e-58 | -8.615850e-47 |
| Msa0358400 | Msa1408050 | 0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa1115280 | Msa1408050 | 0.807890 | 4.051653e-50 | -8.615850e-47 |
| Msa1119090 | Msa1408050 | 0.852834 | 3.559470e-61 | -8.615850e-47 |
| Msa1119190 | Msa1408050 | 0.852021 | 6.064832e-61 | -8.615850e-47 |
| Msa1122860 | Msa1408050 | 0.808428 | 3.112068e-50 | -8.615850e-47 |
| Msa1143020 | Msa1408050 | 0.871309 | 7.541072e-67 | -8.615850e-47 |
| Msa1145810 | Msa1408050 | 0.838394 | 2.951759e-57 | -8.615850e-47 |
| Msa1158390 | Msa1408050 | 0.803961 | 2.714878e-49 | -8.615850e-47 |
| Msa1162060 | Msa1408050 | 0.835727 | 1.418379e-56 | -8.615850e-47 |
| Msa1173490 | Msa1408050 | 0.824096 | 9.711016e-54 | -8.615850e-47 |
| Msa1177780 | Msa1408050 | 0.804152 | 2.477800e-49 | -8.615850e-47 |
| Msa1200250 | Msa1408050 | 0.823146 | 1.620342e-53 | -8.615850e-47 |
| Msa1207310 | Msa1408050 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa1214170 | Msa1408050 | 0.851953 | 6.340619e-61 | -8.615850e-47 |
| Msa1218580 | Msa1408050 | 0.801538 | 8.587713e-49 | -8.615850e-47 |
| Msa1219000 | Msa1408050 | 0.819595 | 1.069708e-52 | -8.615850e-47 |
| Msa1219900 | Msa1408050 | 0.832082 | 1.158129e-55 | -8.615850e-47 |
| Msa1221330 | Msa1408050 | 0.808942 | 2.417462e-50 | -8.615850e-47 |
| Msa0482940 | Msa1408050 | 0.821519 | 3.868211e-53 | -8.615850e-47 |
| Msa0485490 | Msa1408050 | 0.821944 | 3.083552e-53 | -8.615850e-47 |
| Msa0501410 | Msa1408050 | 0.811572 | 6.546792e-51 | -8.615850e-47 |
| Msa0506860 | Msa1408050 | 0.811340 | 7.352255e-51 | -8.615850e-47 |
| Msa0514610 | Msa1408050 | 0.828409 | 9.135783e-55 | -8.615850e-47 |
| Msa0518440 | Msa1408050 | 0.817347 | 3.456427e-52 | -8.615850e-47 |
| Msa0521010 | Msa1408050 | 0.846245 | 2.450895e-59 | -8.615850e-47 |
| Msa0521670 | Msa1408050 | 0.824768 | 6.749043e-54 | -8.615850e-47 |
| Msa0526070 | Msa1408050 | -0.814381 | 1.585791e-51 | -8.615850e-47 |
| Msa0526730 | Msa1408050 | 0.807530 | 4.832347e-50 | -8.615850e-47 |
| Msa0532980 | Msa1408050 | 0.842476 | 2.526607e-58 | -8.615850e-47 |
| Msa0549890 | Msa1408050 | 0.811305 | 7.480474e-51 | -8.615850e-47 |
| Msa0562570 | Msa1408050 | 0.832170 | 1.101268e-55 | -8.615850e-47 |
| Msa0566350 | Msa1408050 | 0.823516 | 1.328076e-53 | -8.615850e-47 |
| Msa0566750 | Msa1408050 | 0.834240 | 3.359796e-56 | -8.615850e-47 |
| Msa0569780 | Msa1408050 | 0.801728 | 7.851097e-49 | -8.615850e-47 |
| Msa0574600 | Msa1408050 | 0.840483 | 8.464464e-58 | -8.615850e-47 |
| Msa0858390 | Msa1408050 | 0.801502 | 8.737034e-49 | -8.615850e-47 |
| Msa0863720 | Msa1408050 | 0.803062 | 4.169725e-49 | -8.615850e-47 |
| Msa0865970 | Msa1408050 | 0.816554 | 5.209480e-52 | -8.615850e-47 |
| Msa0866070 | Msa1408050 | 0.813338 | 2.691860e-51 | -8.615850e-47 |
| Msa0877710 | Msa1408050 | 0.817461 | 3.259149e-52 | -8.615850e-47 |
| Msa0878960 | Msa1408050 | 0.873680 | 1.218531e-67 | -8.615850e-47 |
| Msa0879060 | Msa1408050 | 0.951757 | 1.040734e-109 | -8.615850e-47 |
| Msa0880810 | Msa1408050 | 0.803674 | 3.113950e-49 | -8.615850e-47 |
| Msa0894710 | Msa1408050 | 0.829618 | 4.654910e-55 | -8.615850e-47 |
| Msa0898320 | Msa1408050 | 0.803287 | 3.745437e-49 | -8.615850e-47 |
| Msa0902830 | Msa1408050 | 0.852151 | 5.571272e-61 | -8.615850e-47 |
| Msa0906690 | Msa1408050 | 0.804995 | 1.653112e-49 | -8.615850e-47 |
| Msa0921420 | Msa1408050 | 0.813770 | 2.163331e-51 | -8.615850e-47 |
| Msa0935770 | Msa1408050 | 0.805109 | 1.564328e-49 | -8.615850e-47 |
| Msa0936390 | Msa1408050 | 0.816944 | 4.258268e-52 | -8.615850e-47 |
| Msa0939000 | Msa1408050 | 0.811356 | 7.293834e-51 | -8.615850e-47 |
| Msa0945240 | Msa1408050 | 0.812922 | 3.321410e-51 | -8.615850e-47 |
| Msa0960390 | Msa1408050 | 0.804195 | 2.427359e-49 | -8.615850e-47 |
| Msa0965080 | Msa1408050 | 0.814127 | 1.804859e-51 | -8.615850e-47 |
| Msa0965290 | Msa1408050 | 0.819230 | 1.295219e-52 | -8.615850e-47 |
| Msa0968050 | Msa1408050 | 0.808172 | 3.528363e-50 | -8.615850e-47 |
| Msa0972810 | Msa1408050 | 0.836046 | 1.177006e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408050 | MtrunA17_Chr6g0461791 | 98.643 | 442 | 6 | 0 | 1 | 442 | 1 | 442 | 0.0 | 890 |
| Msa1408050 | MtrunA17_Chr3g0121551 | 20.205 | 292 | 217 | 2 | 52 | 343 | 50 | 325 | 8.93e-14 | 72.0 |
| Msa1408050 | MtrunA17_Chr4g0037541 | 19.557 | 271 | 198 | 4 | 57 | 324 | 54 | 307 | 7.64e-12 | 66.2 |
| Msa1408050 | MtrunA17_Chr2g0277341 | 21.708 | 281 | 195 | 3 | 52 | 324 | 60 | 323 | 2.84e-11 | 64.7 |
| Msa1408050 | MtrunA17_Chr8g0378181 | 18.794 | 282 | 202 | 3 | 52 | 322 | 50 | 315 | 7.34e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408050 | AT3G26670.2 | 75.000 | 436 | 104 | 3 | 1 | 433 | 1 | 434 | 0.0 | 667 |
| Msa1408050 | AT3G26670.4 | 75.000 | 436 | 104 | 3 | 1 | 433 | 1 | 434 | 0.0 | 667 |
| Msa1408050 | AT3G26670.3 | 75.000 | 436 | 104 | 3 | 1 | 433 | 1 | 434 | 0.0 | 667 |
| Msa1408050 | AT3G26670.1 | 75.000 | 436 | 104 | 3 | 1 | 433 | 1 | 434 | 0.0 | 667 |
| Msa1408050 | AT1G34470.1 | 22.846 | 267 | 178 | 2 | 57 | 316 | 67 | 312 | 4.06e-11 | 64.7 |
| Msa1408050 | AT2G21120.1 | 19.322 | 295 | 209 | 5 | 37 | 326 | 36 | 306 | 4.62e-11 | 64.3 |
| Msa1408050 | AT4G09640.1 | 21.569 | 306 | 212 | 6 | 57 | 359 | 67 | 347 | 5.30e-11 | 64.7 |
Find 102 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGTACTGCTGGATTT+TGG | 0.142862 | tig0023342:+73739 | Msa1408050:CDS |
| TGCATAAGAAGTACATTTAA+AGG | 0.157238 | tig0023342:-77011 | None:intergenic |
| TGTGCACTATCTCTTGGTTT+TGG | 0.174892 | tig0023342:+76568 | Msa1408050:CDS |
| GAATTACCTGAAATTGAAAT+TGG | 0.200167 | tig0023342:-70117 | None:intergenic |
| GGGACCAATCTTCTCAAATT+AGG | 0.200420 | tig0023342:+70738 | Msa1408050:CDS |
| TCAAAGGGAAAGAGAAAATA+AGG | 0.211957 | tig0023342:-70028 | None:intergenic |
| GCTAACCCAATTTCAATTTC+AGG | 0.215805 | tig0023342:+70111 | Msa1408050:five_prime_UTR |
| TCTTAGCCGTTACTTGTAAA+TGG | 0.216028 | tig0023342:-73188 | None:intergenic |
| CAGTCACTTCTTGCAGCTTT+GGG | 0.250820 | tig0023342:+72636 | Msa1408050:intron |
| TCTTATGCAAATATATATAA+AGG | 0.264531 | tig0023342:+77025 | Msa1408050:three_prime_UTR |
| GATAAAGATTACAGATATTC+TGG | 0.265706 | tig0023342:+76440 | Msa1408050:CDS |
| TTGATACAATACAACAATTA+AGG | 0.267071 | tig0023342:+70545 | Msa1408050:five_prime_UTR |
| GCAGTCACTTCTTGCAGCTT+TGG | 0.277025 | tig0023342:+72635 | Msa1408050:intron |
| GCCACAGCTTTCATTGTTCT+TGG | 0.284449 | tig0023342:+72842 | Msa1408050:CDS |
| GTTCATTGGTATTTCTTTGC+TGG | 0.299314 | tig0023342:+75905 | Msa1408050:CDS |
| TGAGACTAAAGATAGTTCTT+TGG | 0.302978 | tig0023342:+76036 | Msa1408050:CDS |
| AGCCAAAGGAAATGAAATTA+AGG | 0.313097 | tig0023342:-72293 | None:intergenic |
| TGCCTTAATTTCATTTCCTT+TGG | 0.323753 | tig0023342:+72291 | Msa1408050:CDS |
| CAACTCTGAAAGTATATAAT+AGG | 0.327966 | tig0023342:-72142 | None:intergenic |
| GTCTTTGCTGTGTGCTTCTT+CGG | 0.331223 | tig0023342:-76391 | None:intergenic |
| ACATGACCTCAAACCCATTT+GGG | 0.334317 | tig0023342:+73310 | Msa1408050:CDS |
| GGTAGTATTGCTATAAACTT+TGG | 0.334523 | tig0023342:+70717 | Msa1408050:CDS |
| CCTCTTTGTTTCTGTTGAAA+TGG | 0.356734 | tig0023342:-76077 | None:intergenic |
| TTACTTTGTGTTGAACAAAA+TGG | 0.359982 | tig0023342:+72692 | Msa1408050:CDS |
| TTATAGCAATACTACCAAAA+AGG | 0.362873 | tig0023342:-70710 | None:intergenic |
| TTCATTCTTGATGACATCAT+TGG | 0.366184 | tig0023342:-76628 | None:intergenic |
| TTCCTTTGGCTATGCTGCTC+AGG | 0.369645 | tig0023342:+72305 | Msa1408050:CDS |
| CAATTACAATCAAAGCTAAA+AGG | 0.375249 | tig0023342:-73150 | None:intergenic |
| AACAGGTATTTGACACGTTA+AGG | 0.379853 | tig0023342:+75850 | Msa1408050:intron |
| CGGCAATAGCATACCCCAAA+TGG | 0.385675 | tig0023342:-73324 | None:intergenic |
| GTAGCAGACTTACAGTGATT+TGG | 0.388285 | tig0023342:-73399 | None:intergenic |
| GACATGACCTCAAACCCATT+TGG | 0.390111 | tig0023342:+73309 | Msa1408050:CDS |
| GAACTTCTGCTTGCTATATC+AGG | 0.394740 | tig0023342:+73287 | Msa1408050:CDS |
| CTTGGAAGTGATGGGGTACA+TGG | 0.397753 | tig0023342:+72103 | Msa1408050:CDS |
| GTGTCCTAATTTGAGAAGAT+TGG | 0.402950 | tig0023342:-70742 | None:intergenic |
| ACTTCTTGTGCACTATCTCT+TGG | 0.403283 | tig0023342:+76562 | Msa1408050:CDS |
| ACAAATAATTGAATTATGAA+TGG | 0.404575 | tig0023342:-76877 | None:intergenic |
| TATTTCTCTGTCAACTGCTC+TGG | 0.408057 | tig0023342:-73103 | None:intergenic |
| TTGTCCTTTAAACAGGGTAT+TGG | 0.422996 | tig0023342:+72817 | Msa1408050:intron |
| GTAGTATTGCTATAAACTTT+GGG | 0.425761 | tig0023342:+70718 | Msa1408050:CDS |
| AATTACCTGAAATTGAAATT+GGG | 0.427021 | tig0023342:-70116 | None:intergenic |
| TTACGACTGGCTATGTCTAA+TGG | 0.429669 | tig0023342:+73672 | Msa1408050:CDS |
| AGGACAACAATGTTTATACT+TGG | 0.430760 | tig0023342:+75870 | Msa1408050:CDS |
| CATAGTTTCGAGAAGAAGAA+AGG | 0.449162 | tig0023342:-69512 | None:intergenic |
| TGAAATTGAAATTGTGATGT+TGG | 0.452255 | tig0023342:-70087 | None:intergenic |
| TTTGTTTCTGTTGAAATGGC+AGG | 0.454053 | tig0023342:-76073 | None:intergenic |
| CAGAGAGAAAGACATTTACT+TGG | 0.454553 | tig0023342:+72085 | Msa1408050:intron |
| CTATTATATACTTTCAGAGT+TGG | 0.454723 | tig0023342:+72143 | Msa1408050:CDS |
| ATTTGAGAGCTAAGTTGTGT+TGG | 0.462020 | tig0023342:+70593 | Msa1408050:five_prime_UTR |
| ATGGCTATCAGCTGCACAGC+TGG | 0.462592 | tig0023342:+73691 | Msa1408050:CDS |
| AGACATTTACTTGGAAGTGA+TGG | 0.463692 | tig0023342:+72094 | Msa1408050:CDS |
| TAGACATAGCCAGTCGTAAG+AGG | 0.475251 | tig0023342:-73668 | None:intergenic |
| TACTTTCAGAGTTGGAGAAT+CGG | 0.476261 | tig0023342:+72151 | Msa1408050:CDS |
| CTTATGCAAATATATATAAA+GGG | 0.476459 | tig0023342:+77026 | Msa1408050:three_prime_UTR |
| TTCCCATGTTTCAAATAGCA+TGG | 0.482456 | tig0023342:+73901 | Msa1408050:CDS |
| ATGACTAACAAACACTATCA+AGG | 0.484016 | tig0023342:-76778 | None:intergenic |
| CAAAGGGAAAGAGAAAATAA+GGG | 0.486325 | tig0023342:-70027 | None:intergenic |
| TTTGTTGCATCTTCATCCAT+AGG | 0.490370 | tig0023342:-76721 | None:intergenic |
| GACATTTACTTGGAAGTGAT+GGG | 0.492218 | tig0023342:+72095 | Msa1408050:CDS |
| ACATTCTTCTCAATCTGTAC+AGG | 0.494590 | tig0023342:+73924 | Msa1408050:CDS |
| GGAATGATGTGTGTGTTCAT+TGG | 0.500051 | tig0023342:+75891 | Msa1408050:CDS |
| GAAATTGAAATTGTGATGTT+GGG | 0.503872 | tig0023342:-70086 | None:intergenic |
| TAAGTTACATACCAGGTGAT+TGG | 0.511073 | tig0023342:-72895 | None:intergenic |
| ATGATGTCATCAAGAATGAA+TGG | 0.511671 | tig0023342:+76631 | Msa1408050:CDS |
| GCATACCCCAAATGGGTTTG+AGG | 0.512283 | tig0023342:-73316 | None:intergenic |
| CTGGCACCTGATGAATCAAA+AGG | 0.517430 | tig0023342:+75924 | Msa1408050:CDS |
| GGCAATAGCATACCCCAAAT+GGG | 0.523524 | tig0023342:-73323 | None:intergenic |
| CAGATGACTAGGTTGAATGA+AGG | 0.523979 | tig0023342:+73849 | Msa1408050:intron |
| TCATCGCCGTAGGATTTCCC+AGG | 0.530393 | tig0023342:+76797 | Msa1408050:three_prime_UTR |
| TGGTTGGAGCAAAATACCTA+TGG | 0.531629 | tig0023342:+76705 | Msa1408050:CDS |
| ATGAATGGCTTCAGAGGCAA+TGG | 0.532560 | tig0023342:+76646 | Msa1408050:CDS |
| GAAACTACAGCATATGAAAA+CGG | 0.535353 | tig0023342:-73344 | None:intergenic |
| TATCGATGAGAAATTCTGGT+TGG | 0.535924 | tig0023342:+76689 | Msa1408050:CDS |
| GTCCATGCTATTTGAAACAT+GGG | 0.543572 | tig0023342:-73903 | None:intergenic |
| TGTCCATGCTATTTGAAACA+TGG | 0.547427 | tig0023342:-73904 | None:intergenic |
| AGATATTCTGGTCAAGGCAA+AGG | 0.550087 | tig0023342:+76452 | Msa1408050:CDS |
| CAGTTCTAACCTCTTACGAC+TGG | 0.564450 | tig0023342:+73659 | Msa1408050:intron |
| TCAAGAATGAATGGCTTCAG+AGG | 0.564716 | tig0023342:+76640 | Msa1408050:CDS |
| GATTACAGATATTCTGGTCA+AGG | 0.568159 | tig0023342:+76446 | Msa1408050:CDS |
| ACTGAGAAATAAAAGAAGCA+TGG | 0.568619 | tig0023342:-73724 | None:intergenic |
| TTTCATATGCTGTAGTTTCG+GGG | 0.572383 | tig0023342:+73348 | Msa1408050:CDS |
| AATAAGAATTGCATCGAACA+TGG | 0.577173 | tig0023342:-73877 | None:intergenic |
| TCAAAGCTAAAAGGTACAGA+AGG | 0.587426 | tig0023342:-73141 | None:intergenic |
| GTACAGAAGGAACGCGACAT+TGG | 0.594650 | tig0023342:-73128 | None:intergenic |
| AACAAACACTATCAAGGGCT+AGG | 0.595279 | tig0023342:-76772 | None:intergenic |
| ATAAAGGGTATGCATGATGT+TGG | 0.595603 | tig0023342:+77041 | Msa1408050:three_prime_UTR |
| GTTGGGTTGAATTGAATCGA+AGG | 0.613516 | tig0023342:-70069 | None:intergenic |
| CGAAAACCTGGGAAATCCTA+CGG | 0.614057 | tig0023342:-76803 | None:intergenic |
| TGACTAACAAACACTATCAA+GGG | 0.614771 | tig0023342:-76777 | None:intergenic |
| TTCATATGCTGTAGTTTCGG+GGG | 0.615874 | tig0023342:+73349 | Msa1408050:CDS |
| TGTTTGTTAGTCATCGCCGT+AGG | 0.628588 | tig0023342:+76787 | Msa1408050:three_prime_UTR |
| TGAAATGGCAGGAGACACTA+CGG | 0.632048 | tig0023342:-76062 | None:intergenic |
| AAACACTATCAAGGGCTAGG+AGG | 0.632929 | tig0023342:-76769 | None:intergenic |
| CCATTTCAACAGAAACAAAG+AGG | 0.633660 | tig0023342:+76077 | Msa1408050:CDS |
| TCCAAGAACAATGAAAGCTG+TGG | 0.636557 | tig0023342:-72843 | None:intergenic |
| TTTGGAAATCACCAATCACC+TGG | 0.643242 | tig0023342:+72884 | Msa1408050:CDS |
| TCAGAGGCAATGGACTCGAA+CGG | 0.648762 | tig0023342:+76656 | Msa1408050:CDS |
| ACACAAAGTAAGCGAATGCG+AGG | 0.654505 | tig0023342:-72680 | None:intergenic |
| ACATTTACTTGGAAGTGATG+GGG | 0.654846 | tig0023342:+72096 | Msa1408050:CDS |
| TACCTGAGCAGCATAGCCAA+AGG | 0.659340 | tig0023342:-72307 | None:intergenic |
| TCTCAAATTAGGACACAATG+AGG | 0.672040 | tig0023342:+70749 | Msa1408050:CDS |
| CATGACCTCAAACCCATTTG+GGG | 0.699560 | tig0023342:+73311 | Msa1408050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATTTGATCAAAAAA+GGG | - | tig0023342:70335-70354 | None:intergenic | 10.0% |
| !!! | AATTATTTTGTGTTTTTATA+TGG | + | tig0023342:70346-70365 | Msa1408050:intron | 10.0% |
| !! | AAAATAATAACTATTTAATG+AGG | + | tig0023342:70369-70388 | Msa1408050:intron | 10.0% |
| !! | TTTAATATTACAAATACAAT+GGG | - | tig0023342:74203-74222 | None:intergenic | 10.0% |
| !!! | TTTTAATATTACAAATACAA+TGG | - | tig0023342:74204-74223 | None:intergenic | 10.0% |
| !! | AAATTGAAATACTATAAATA+GGG | + | tig0023342:74922-74941 | Msa1408050:intron | 10.0% |
| !! | TTAATATGAGAAATATTAAA+GGG | + | tig0023342:75212-75231 | Msa1408050:intron | 10.0% |
| !!! | ATTATAGATTGAAAATTTTA+GGG | + | tig0023342:75302-75321 | Msa1408050:intron | 10.0% |
| !!! | TGTTTTTTCATAATAAATTT+AGG | + | tig0023342:75801-75820 | Msa1408050:intron | 10.0% |
| !!! | ATAAATACAAAATTGTTTTA+AGG | + | tig0023342:75951-75970 | Msa1408050:intron | 10.0% |
| !!! | TAAGTTATAAGTTATTTTGA+AGG | + | tig0023342:69821-69840 | Msa1408050:intron | 15.0% |
| !!! | AAGTTATAAGTTATTTTGAA+GGG | + | tig0023342:69822-69841 | Msa1408050:intron | 15.0% |
| !! | CAAAATAATTTGATCAAAAA+AGG | - | tig0023342:70336-70355 | None:intergenic | 15.0% |
| !!! | ATTACATTTTTTAAGGTTTA+TGG | + | tig0023342:70443-70462 | Msa1408050:intron | 15.0% |
| !!! | ATTGATTTTCAACATTATAA+GGG | + | tig0023342:71645-71664 | Msa1408050:intron | 15.0% |
| !! | ACTTAAAAGAAATAATTAGA+GGG | - | tig0023342:72010-72029 | None:intergenic | 15.0% |
| !! | AACTTAAAAGAAATAATTAG+AGG | - | tig0023342:72011-72030 | None:intergenic | 15.0% |
| !! | ATCATAAAATTACATATGTT+AGG | - | tig0023342:72367-72386 | None:intergenic | 15.0% |
| !!! | ATCAAATGAACTTTTTTTTA+AGG | - | tig0023342:72593-72612 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTACCGAAAAAT+AGG | - | tig0023342:73771-73790 | None:intergenic | 15.0% |
| !! | TTCTTAAATATATATCCTAA+GGG | - | tig0023342:74122-74141 | None:intergenic | 15.0% |
| !! | TGAAATAATTTCAAAATACT+TGG | + | tig0023342:74298-74317 | Msa1408050:intron | 15.0% |
| !! | GAAATTGAAATACTATAAAT+AGG | + | tig0023342:74921-74940 | Msa1408050:intron | 15.0% |
| !! | AATTGAAATACTATAAATAG+GGG | + | tig0023342:74923-74942 | Msa1408050:intron | 15.0% |
| !! | CTTAATATGAGAAATATTAA+AGG | + | tig0023342:75211-75230 | Msa1408050:intron | 15.0% |
| !!! | GATTATAGATTGAAAATTTT+AGG | + | tig0023342:75301-75320 | Msa1408050:intron | 15.0% |
| !! | ACAAATAATTGAATTATGAA+TGG | - | tig0023342:76880-76899 | None:intergenic | 15.0% |
| !! | TCTTATGCAAATATATATAA+AGG | + | tig0023342:77025-77044 | Msa1408050:three_prime_UTR | 15.0% |
| !! | CTTATGCAAATATATATAAA+GGG | + | tig0023342:77026-77045 | Msa1408050:three_prime_UTR | 15.0% |
| !!! | TTATTTTTCTCTCTTTTCAT+TGG | - | tig0023342:69738-69757 | None:intergenic | 20.0% |
| !! | AATGAAAAGAGAGAAAAATA+AGG | + | tig0023342:69737-69756 | Msa1408050:intron | 20.0% |
| !!! | TAGATAAAGAAGAATTTTCT+TGG | - | tig0023342:69924-69943 | None:intergenic | 20.0% |
| !!! | ATGAGAATTTTGAATTCAAA+GGG | - | tig0023342:70046-70065 | None:intergenic | 20.0% |
| !!! | AATGAGAATTTTGAATTCAA+AGG | - | tig0023342:70047-70066 | None:intergenic | 20.0% |
| !! | AATTACCTGAAATTGAAATT+GGG | - | tig0023342:70119-70138 | None:intergenic | 20.0% |
| !!! | ATCTAGGTTTTATTTCAATT+GGG | + | tig0023342:70231-70250 | Msa1408050:intron | 20.0% |
| !!! | GTACTTGATTACATTTTTTA+AGG | + | tig0023342:70436-70455 | Msa1408050:intron | 20.0% |
| !!! | TTTTTAAGGTTTATGGATTT+TGG | + | tig0023342:70450-70469 | Msa1408050:intron | 20.0% |
| !!! | TTTATGTTTGTTAATGAAAC+AGG | + | tig0023342:70486-70505 | Msa1408050:intron | 20.0% |
| !! | TTGATACAATACAACAATTA+AGG | + | tig0023342:70545-70564 | Msa1408050:five_prime_UTR | 20.0% |
| !! | AGAACTTGAAATACTTTAAA+AGG | + | tig0023342:71257-71276 | Msa1408050:intron | 20.0% |
| !! | TTATATATAACAGAACATTG+TGG | + | tig0023342:71318-71337 | Msa1408050:intron | 20.0% |
| !!! | CATTGATTTTCAACATTATA+AGG | + | tig0023342:71644-71663 | Msa1408050:intron | 20.0% |
| !!! | TTATCTTTTGTTCTAAACTA+AGG | + | tig0023342:71711-71730 | Msa1408050:intron | 20.0% |
| !!! | TTGTATAAATTTTGATATGC+AGG | + | tig0023342:72243-72262 | Msa1408050:intron | 20.0% |
| !! | AATTTCCAAGAAAGAAAAAT+AGG | - | tig0023342:72272-72291 | None:intergenic | 20.0% |
| !!! | GTCATTTTCTTAAAATACTA+TGG | + | tig0023342:72519-72538 | Msa1408050:intron | 20.0% |
| !! | TTAATATTTGTCCTTTAAAC+AGG | + | tig0023342:72810-72829 | Msa1408050:intron | 20.0% |
| !! | TAATATTTGTCCTTTAAACA+GGG | + | tig0023342:72811-72830 | Msa1408050:intron | 20.0% |
| !!! | TTTTTTTCTGAAGCTTAATA+TGG | - | tig0023342:72996-73015 | None:intergenic | 20.0% |
| !! | AATTAAATGTAATCATGTGT+CGG | - | tig0023342:73518-73537 | None:intergenic | 20.0% |
| !! | TTTCGGTAAAAAAAATTCTT+AGG | + | tig0023342:73774-73793 | Msa1408050:intron | 20.0% |
| !!! | TACAGGATTTATATATTTTC+AGG | + | tig0023342:73941-73960 | Msa1408050:CDS | 20.0% |
| !!! | TATATATTTTCAGGAATATC+AGG | + | tig0023342:73950-73969 | Msa1408050:CDS | 20.0% |
| !! | AGAAGTTAAAATCAAACTTA+TGG | + | tig0023342:74061-74080 | Msa1408050:intron | 20.0% |
| !! | GTTCTTAAATATATATCCTA+AGG | - | tig0023342:74123-74142 | None:intergenic | 20.0% |
| !! | TAATTTCAAAATACTTGGTT+TGG | + | tig0023342:74303-74322 | Msa1408050:intron | 20.0% |
| !! | ATTGAAATACTATAAATAGG+GGG | + | tig0023342:74924-74943 | Msa1408050:intron | 20.0% |
| !!! | GAAATATTAAAGGGTATATT+AGG | + | tig0023342:75221-75240 | Msa1408050:intron | 20.0% |
| !! | TACTTCATAATAATCAAAGT+TGG | - | tig0023342:75437-75456 | None:intergenic | 20.0% |
| !! | GTCTACTTATTAAGAATAAA+CGG | - | tig0023342:75588-75607 | None:intergenic | 20.0% |
| !!! | ATATGATAATTGTTCACTTT+TGG | - | tig0023342:76125-76144 | None:intergenic | 20.0% |
| !! | TATATCAGATAAAACAGTAT+TGG | - | tig0023342:76356-76375 | None:intergenic | 20.0% |
| !!! | AATACTGTTTTATCTGATAT+AGG | + | tig0023342:76355-76374 | Msa1408050:intron | 20.0% |
| !! | AAAAAATAAATCGAAAACCT+GGG | - | tig0023342:76817-76836 | None:intergenic | 20.0% |
| !! | AAAAAAATAAATCGAAAACC+TGG | - | tig0023342:76818-76837 | None:intergenic | 20.0% |
| !! | ACACCAATCATTAAAAAAAT+CGG | - | tig0023342:76843-76862 | None:intergenic | 20.0% |
| !!! | TTTTTATCCTTTTTTCCTTA+GGG | - | tig0023342:76929-76948 | None:intergenic | 20.0% |
| !!! | TTTTTTATCCTTTTTTCCTT+AGG | - | tig0023342:76930-76949 | None:intergenic | 20.0% |
| ! | TCATAGTAGTTGTTATCAAA+TGG | + | tig0023342:69763-69782 | Msa1408050:intron | 25.0% |
| ! | AAGTACAAACAATTCTTCTT+CGG | + | tig0023342:69862-69881 | Msa1408050:intron | 25.0% |
| ! | GAAATTGAAATTGTGATGTT+GGG | - | tig0023342:70089-70108 | None:intergenic | 25.0% |
| ! | TGAAATTGAAATTGTGATGT+TGG | - | tig0023342:70090-70109 | None:intergenic | 25.0% |
| ! | GAATTACCTGAAATTGAAAT+TGG | - | tig0023342:70120-70139 | None:intergenic | 25.0% |
| !!! | GATCTAGGTTTTATTTCAAT+TGG | + | tig0023342:70230-70249 | Msa1408050:intron | 25.0% |
| !!! | TTATAGTGTTGTTTTGAAAC+TGG | + | tig0023342:70510-70529 | Msa1408050:five_prime_UTR | 25.0% |
| ! | TTATAGCAATACTACCAAAA+AGG | - | tig0023342:70713-70732 | None:intergenic | 25.0% |
| ! | GTAGTATTGCTATAAACTTT+GGG | + | tig0023342:70718-70737 | Msa1408050:CDS | 25.0% |
| !! | CTTTTATGTATGTATATGCA+CGG | + | tig0023342:70817-70836 | Msa1408050:intron | 25.0% |
| ! | TAAAATGACAGAGAAATAGA+AGG | + | tig0023342:70902-70921 | Msa1408050:intron | 25.0% |
| ! | AAAATTCCCTTTAATTCGAA+CGG | - | tig0023342:70992-71011 | None:intergenic | 25.0% |
| ! | TTGTAAGCTGAAATCTTATA+AGG | - | tig0023342:71419-71438 | None:intergenic | 25.0% |
| ! | TAATTCTCGAGTTAATCAAT+TGG | + | tig0023342:71441-71460 | Msa1408050:intron | 25.0% |
| !! | CAACTCTGAAAGTATATAAT+AGG | - | tig0023342:72145-72164 | None:intergenic | 25.0% |
| ! | CTATTATATACTTTCAGAGT+TGG | + | tig0023342:72143-72162 | Msa1408050:CDS | 25.0% |
| ! | TGTAATTGCATATATGTATG+TGG | + | tig0023342:72179-72198 | Msa1408050:intron | 25.0% |
| ! | TTACTTTGTGTTGAACAAAA+TGG | + | tig0023342:72692-72711 | Msa1408050:CDS | 25.0% |
| !! | TTACATTGGTAGAACAATTT+TGG | - | tig0023342:72774-72793 | None:intergenic | 25.0% |
| ! | TATGAAATAAGTTACATACC+AGG | - | tig0023342:72905-72924 | None:intergenic | 25.0% |
| !!! | ATATGAACATTGATTTCACA+AGG | - | tig0023342:72956-72975 | None:intergenic | 25.0% |
| ! | AGAAAAAATGCTCATTTCAA+TGG | + | tig0023342:73034-73053 | Msa1408050:intron | 25.0% |
| ! | CAATTACAATCAAAGCTAAA+AGG | - | tig0023342:73153-73172 | None:intergenic | 25.0% |
| !! | AGAGTAGACTTATGAATTTT+AGG | - | tig0023342:74145-74164 | None:intergenic | 25.0% |
| ! | AAATTATTTCAGCGATGATA+TGG | - | tig0023342:74289-74308 | None:intergenic | 25.0% |
| !!! | TTTTATGGAGAAGTACTTAT+AGG | + | tig0023342:74833-74852 | Msa1408050:intron | 25.0% |
| ! | ATATGCAATTACATGTAATC+AGG | + | tig0023342:75121-75140 | Msa1408050:intron | 25.0% |
| !! | TTAGGAAAGTACACTATTAA+AGG | + | tig0023342:75239-75258 | Msa1408050:intron | 25.0% |
| !! | TAGGAAAGTACACTATTAAA+GGG | + | tig0023342:75240-75259 | Msa1408050:intron | 25.0% |
| ! | CTAAATTCATTGAGTTAACT+AGG | + | tig0023342:75279-75298 | Msa1408050:intron | 25.0% |
| !!! | AAAATTTTAGGGATGCAAAT+GGG | + | tig0023342:75313-75332 | Msa1408050:intron | 25.0% |
| !! | AGGATTTTTCTAATGAATAG+CGG | + | tig0023342:75488-75507 | Msa1408050:intron | 25.0% |
| ! | ATTAAGAATAAACGGAGTTA+TGG | - | tig0023342:75580-75599 | None:intergenic | 25.0% |
| ! | ATAAAAGTTGTAGAAGTGAT+AGG | - | tig0023342:75723-75742 | None:intergenic | 25.0% |
| !!! | ATAATACCTTTTGATTCATC+AGG | - | tig0023342:75933-75952 | None:intergenic | 25.0% |
| ! | ATATTAACCTTTGAATACCT+CGG | - | tig0023342:75989-76008 | None:intergenic | 25.0% |
| !! | AATCATTTAGTTTCCTTTCA+GGG | - | tig0023342:76159-76178 | None:intergenic | 25.0% |
| ! | GATAAAGATTACAGATATTC+TGG | + | tig0023342:76440-76459 | Msa1408050:CDS | 25.0% |
| !! | ATTTTATCGATGAGAAATTC+TGG | + | tig0023342:76685-76704 | Msa1408050:CDS | 25.0% |
| !!! | TCTCCGATTTTTTTAATGAT+TGG | + | tig0023342:76837-76856 | Msa1408050:three_prime_UTR | 25.0% |
| !! | TTTTATCCTTTTTTCCTTAG+GGG | - | tig0023342:76928-76947 | None:intergenic | 25.0% |
| !! | TGCATAAGAAGTACATTTAA+AGG | - | tig0023342:77014-77033 | None:intergenic | 25.0% |
| !! | AGTTTAAACTTCGCCATTTT+TGG | + | tig0023342:69651-69670 | Msa1408050:intron | 30.0% |
| ! | TGTCTAAAGTTGTCCAAAAA+TGG | - | tig0023342:69667-69686 | None:intergenic | 30.0% |
| TCAAAAACAATGAAGAGAGA+GGG | - | tig0023342:69715-69734 | None:intergenic | 30.0% | |
| !!! | TACGAAAGTAACCTCTTTTT+TGG | + | tig0023342:69897-69916 | Msa1408050:intron | 30.0% |
| ! | ATTTTCTTGGTCCAAAAAAG+AGG | - | tig0023342:69911-69930 | None:intergenic | 30.0% |
| CAAAGGGAAAGAGAAAATAA+GGG | - | tig0023342:70030-70049 | None:intergenic | 30.0% | |
| TCAAAGGGAAAGAGAAAATA+AGG | - | tig0023342:70031-70050 | None:intergenic | 30.0% | |
| CATACACAATGCAATTTCTT+TGG | + | tig0023342:70147-70166 | Msa1408050:intron | 30.0% | |
| CCTAGATCTACTAAATTTGT+AGG | - | tig0023342:70218-70237 | None:intergenic | 30.0% | |
| CCTACAAATTTAGTAGATCT+AGG | + | tig0023342:70215-70234 | Msa1408050:intron | 30.0% | |
| ! | GTACAACATCTTTTATCCAT+GGG | + | tig0023342:70660-70679 | Msa1408050:exon | 30.0% |
| ! | TACAACATCTTTTATCCATG+GGG | + | tig0023342:70661-70680 | Msa1408050:exon | 30.0% |
| GGTAGTATTGCTATAAACTT+TGG | + | tig0023342:70717-70736 | Msa1408050:CDS | 30.0% | |
| !!! | TTCTCTGTCATTTTATACTG+TGG | - | tig0023342:70897-70916 | None:intergenic | 30.0% |
| AAAACTACCGTTCGAATTAA+AGG | + | tig0023342:70982-71001 | Msa1408050:intron | 30.0% | |
| AAACTACCGTTCGAATTAAA+GGG | + | tig0023342:70983-71002 | Msa1408050:intron | 30.0% | |
| ACATATTGTAGAAACGATGA+TGG | + | tig0023342:71138-71157 | Msa1408050:intron | 30.0% | |
| CATATTGTAGAAACGATGAT+GGG | + | tig0023342:71139-71158 | Msa1408050:intron | 30.0% | |
| AAACTCAGTATAGGTTGTTT+GGG | + | tig0023342:71162-71181 | Msa1408050:intron | 30.0% | |
| !! | CAGATAGAGAGTATTGAAAT+TGG | + | tig0023342:71221-71240 | Msa1408050:intron | 30.0% |
| !! | TAGAGAGTATTGAAATTGGT+AGG | + | tig0023342:71225-71244 | Msa1408050:intron | 30.0% |
| !! | AGAGAGTATTGAAATTGGTA+GGG | + | tig0023342:71226-71245 | Msa1408050:intron | 30.0% |
| ACTGTTAAGACAGAGATTAT+TGG | + | tig0023342:71281-71300 | Msa1408050:intron | 30.0% | |
| CTGTTAAGACAGAGATTATT+GGG | + | tig0023342:71282-71301 | Msa1408050:intron | 30.0% | |
| GATGTAAGAAGATACAAATG+AGG | - | tig0023342:71524-71543 | None:intergenic | 30.0% | |
| TGATAGCAATGTTGTGAATA+AGG | + | tig0023342:71552-71571 | Msa1408050:intron | 30.0% | |
| ! | TGAGGTATATCTTTTGGATT+AGG | + | tig0023342:71578-71597 | Msa1408050:intron | 30.0% |
| !! | GTATATCTTTTGGATTAGGA+GGG | + | tig0023342:71582-71601 | Msa1408050:intron | 30.0% |
| ! | CAACATTATAAGGGTATGTT+TGG | + | tig0023342:71654-71673 | Msa1408050:intron | 30.0% |
| ! | ATTATAAGGGTATGTTTGGA+TGG | + | tig0023342:71658-71677 | Msa1408050:intron | 30.0% |
| TATGTTTGGATGGATGATTT+CGG | - | tig0023342:71852-71871 | None:intergenic | 30.0% | |
| ! | CTTTACTTTAAGGGTATGTT+TGG | - | tig0023342:71866-71885 | None:intergenic | 30.0% |
| GTTTCAGTGCTTTACTTTAA+GGG | - | tig0023342:71875-71894 | None:intergenic | 30.0% | |
| TGTTTCAGTGCTTTACTTTA+AGG | - | tig0023342:71876-71895 | None:intergenic | 30.0% | |
| CACATGACATGAACAAAAAT+CGG | - | tig0023342:71920-71939 | None:intergenic | 30.0% | |
| GTTGCAATATCAAATTAGTC+TGG | + | tig0023342:72028-72047 | Msa1408050:intron | 30.0% | |
| AAAAACAAGAATCAGCAACA+TGG | - | tig0023342:72221-72240 | None:intergenic | 30.0% | |
| !!! | ATGTTGCTGATTCTTGTTTT+TGG | + | tig0023342:72220-72239 | Msa1408050:intron | 30.0% |
| !! | GGTATCCTATTTTTCTTTCT+TGG | + | tig0023342:72264-72283 | Msa1408050:intron | 30.0% |
| TGCCTTAATTTCATTTCCTT+TGG | + | tig0023342:72291-72310 | Msa1408050:CDS | 30.0% | |
| AGCCAAAGGAAATGAAATTA+AGG | - | tig0023342:72296-72315 | None:intergenic | 30.0% | |
| ! | AAAACATCCAATAAGTATCG+TGG | - | tig0023342:72343-72362 | None:intergenic | 30.0% |
| TTGAATGTATTCACATGTGT+CGG | - | tig0023342:72495-72514 | None:intergenic | 30.0% | |
| !! | GTAGAACAATTTTGGTGAAA+AGG | - | tig0023342:72766-72785 | None:intergenic | 30.0% |
| TCTACCAATGTAAATTCTTG+TGG | + | tig0023342:72781-72800 | Msa1408050:intron | 30.0% | |
| TAAGCCACAAGAATTTACAT+TGG | - | tig0023342:72788-72807 | None:intergenic | 30.0% | |
| !!! | AATGTTTTTCTAGTTGCGTT+TGG | + | tig0023342:72866-72885 | Msa1408050:CDS | 30.0% |
| GTGCAAACTAATTTATGTGA+CGG | + | tig0023342:73056-73075 | Msa1408050:intron | 30.0% | |
| ATCACTCCATTTACAAGTAA+CGG | + | tig0023342:73182-73201 | Msa1408050:intron | 30.0% | |
| GATTAAAATGTGAAATGTGC+AGG | + | tig0023342:73258-73277 | Msa1408050:intron | 30.0% | |
| GAAACTACAGCATATGAAAA+CGG | - | tig0023342:73347-73366 | None:intergenic | 30.0% | |
| ! | GTTTTCATATGCTGTAGTTT+CGG | + | tig0023342:73346-73365 | Msa1408050:CDS | 30.0% |
| ! | TTTTCATATGCTGTAGTTTC+GGG | + | tig0023342:73347-73366 | Msa1408050:CDS | 30.0% |
| ACTGTGTACTTTATTCCTAA+TGG | + | tig0023342:73622-73641 | Msa1408050:intron | 30.0% | |
| ACTGAGAAATAAAAGAAGCA+TGG | - | tig0023342:73727-73746 | None:intergenic | 30.0% | |
| ! | TTCTAATTTTGCAGATGACT+AGG | + | tig0023342:73838-73857 | Msa1408050:intron | 30.0% |
| AATAAGAATTGCATCGAACA+TGG | - | tig0023342:73880-73899 | None:intergenic | 30.0% | |
| TCATAAGTCTACTCTTACTT+TGG | + | tig0023342:74150-74169 | Msa1408050:intron | 30.0% | |
| GTAGTTTCTGAGTAAGAATT+CGG | + | tig0023342:74466-74485 | Msa1408050:intron | 30.0% | |
| !! | CTAATGGATTGTAAAAACGA+GGG | - | tig0023342:74614-74633 | None:intergenic | 30.0% |
| !! | TCTAATGGATTGTAAAAACG+AGG | - | tig0023342:74615-74634 | None:intergenic | 30.0% |
| !! | TCGTTTTTACAATCCATTAG+AGG | + | tig0023342:74614-74633 | Msa1408050:intron | 30.0% |
| !! | CTTATATGTTGCTATTTCCT+GGG | + | tig0023342:74661-74680 | Msa1408050:intron | 30.0% |
| ! | GGAAAATAAGGTCTTTTGTA+AGG | - | tig0023342:74793-74812 | None:intergenic | 30.0% |
| !! | GAAAATTTTAGGGATGCAAA+TGG | + | tig0023342:75312-75331 | Msa1408050:intron | 30.0% |
| !!! | CTTTGTAAGTTTTGTTCAGA+TGG | + | tig0023342:75405-75424 | Msa1408050:intron | 30.0% |
| TTAATAAGTAGACATCCTTC+CGG | + | tig0023342:75595-75614 | Msa1408050:intron | 30.0% | |
| AACCTTATCTTCATGAAAAC+AGG | + | tig0023342:75833-75852 | Msa1408050:intron | 30.0% | |
| ! | TACCTGTTTTCATGAAGATA+AGG | - | tig0023342:75838-75857 | None:intergenic | 30.0% |
| AGGACAACAATGTTTATACT+TGG | + | tig0023342:75870-75889 | Msa1408050:CDS | 30.0% | |
| ! | TAAGGTTTTACTATAAACCG+AGG | + | tig0023342:75969-75988 | Msa1408050:intron | 30.0% |
| TGAGACTAAAGATAGTTCTT+TGG | + | tig0023342:76036-76055 | Msa1408050:CDS | 30.0% | |
| ! | CAATCATTTAGTTTCCTTTC+AGG | - | tig0023342:76160-76179 | None:intergenic | 30.0% |
| ! | TAAGCACATGTTGCTTATTA+TGG | + | tig0023342:76314-76333 | Msa1408050:intron | 30.0% |
| ! | AAGCACATGTTGCTTATTAT+GGG | + | tig0023342:76315-76334 | Msa1408050:intron | 30.0% |
| ! | CAAAGGTATATCATTATGAC+TGG | + | tig0023342:76469-76488 | Msa1408050:intron | 30.0% |
| ! | TTCATTCTTGATGACATCAT+TGG | - | tig0023342:76631-76650 | None:intergenic | 30.0% |
| ATGATGTCATCAAGAATGAA+TGG | + | tig0023342:76631-76650 | Msa1408050:CDS | 30.0% | |
| TGACTAACAAACACTATCAA+GGG | - | tig0023342:76780-76799 | None:intergenic | 30.0% | |
| ATGACTAACAAACACTATCA+AGG | - | tig0023342:76781-76800 | None:intergenic | 30.0% | |
| !!! | TTTATCCTTTTTTCCTTAGG+GGG | - | tig0023342:76927-76946 | None:intergenic | 30.0% |
| !! | GTTTTTCTGGGAAGAAATGA+GGG | + | tig0023342:69616-69635 | Msa1408050:intron | 35.0% |
| GTCAAAAACAATGAAGAGAG+AGG | - | tig0023342:69716-69735 | None:intergenic | 35.0% | |
| ! | AGAGGTTACTTTCGTAGTTA+TGG | - | tig0023342:69893-69912 | None:intergenic | 35.0% |
| GCTAACCCAATTTCAATTTC+AGG | + | tig0023342:70111-70130 | Msa1408050:five_prime_UTR | 35.0% | |
| ATTTGAGAGCTAAGTTGTGT+TGG | + | tig0023342:70593-70612 | Msa1408050:five_prime_UTR | 35.0% | |
| ! | ATCAAATTTTGTGCTGCATG+TGG | + | tig0023342:70624-70643 | Msa1408050:five_prime_UTR | 35.0% |
| ! | GGTACAACATCTTTTATCCA+TGG | + | tig0023342:70659-70678 | Msa1408050:exon | 35.0% |
| ! | ACAACATCTTTTATCCATGG+GGG | + | tig0023342:70662-70681 | Msa1408050:exon | 35.0% |
| GTGTCCTAATTTGAGAAGAT+TGG | - | tig0023342:70745-70764 | None:intergenic | 35.0% | |
| TCTCAAATTAGGACACAATG+AGG | + | tig0023342:70749-70768 | Msa1408050:CDS | 35.0% | |
| AATTAGGACACAATGAGGTA+TGG | + | tig0023342:70754-70773 | Msa1408050:intron | 35.0% | |
| ATCATATACCACAAGTGACA+CGG | + | tig0023342:70855-70874 | Msa1408050:intron | 35.0% | |
| AATGACAGAGAAATAGAAGG+AGG | + | tig0023342:70905-70924 | Msa1408050:intron | 35.0% | |
| !! | ATCATCGAGTTCAAGTTGAA+TGG | + | tig0023342:70933-70952 | Msa1408050:intron | 35.0% |
| ! | TTCTCAGGTGTTTTATGTGA+TGG | + | tig0023342:70956-70975 | Msa1408050:intron | 35.0% |
| TATTGAGACGAATATTGCGT+TGG | + | tig0023342:71087-71106 | Msa1408050:intron | 35.0% | |
| TAAGACTAGACTTGAGTGTT+GGG | + | tig0023342:71110-71129 | Msa1408050:intron | 35.0% | |
| GAAACTCAGTATAGGTTGTT+TGG | + | tig0023342:71161-71180 | Msa1408050:intron | 35.0% | |
| ! | TGATCGACTCTACTTTCTAT+AGG | - | tig0023342:71203-71222 | None:intergenic | 35.0% |
| !! | GAGAGTATTGAAATTGGTAG+GGG | + | tig0023342:71227-71246 | Msa1408050:intron | 35.0% |
| TAAGACAGAGATTATTGGGT+TGG | + | tig0023342:71286-71305 | Msa1408050:intron | 35.0% | |
| TTATTCCACCAAGTAAGGTT+GGG | - | tig0023342:71362-71381 | None:intergenic | 35.0% | |
| !! | AAGTCTTATTCCACCAAGTA+AGG | - | tig0023342:71367-71386 | None:intergenic | 35.0% |
| ! | TTACTTGGTGGAATAAGACT+TGG | + | tig0023342:71366-71385 | Msa1408050:intron | 35.0% |
| GAACAAGCGAGTTAATCAAT+TGG | + | tig0023342:71478-71497 | Msa1408050:intron | 35.0% | |
| !! | GGTATATCTTTTGGATTAGG+AGG | + | tig0023342:71581-71600 | Msa1408050:intron | 35.0% |
| ! | ATGTTTGGATGGAGGATTTT+TGG | + | tig0023342:71669-71688 | Msa1408050:intron | 35.0% |
| ! | TGTTTGGATGGAGGATTTTT+GGG | + | tig0023342:71670-71689 | Msa1408050:intron | 35.0% |
| ! | ACTTTAAGGGTATGTTTGGA+TGG | - | tig0023342:71862-71881 | None:intergenic | 35.0% |
| TGACATGAACAAAAATCGGT+TGG | - | tig0023342:71916-71935 | None:intergenic | 35.0% | |
| TGTCATGTGACTTCTTTGAA+TGG | + | tig0023342:71931-71950 | Msa1408050:intron | 35.0% | |
| CAGAGAGAAAGACATTTACT+TGG | + | tig0023342:72085-72104 | Msa1408050:intron | 35.0% | |
| AGACATTTACTTGGAAGTGA+TGG | + | tig0023342:72094-72113 | Msa1408050:CDS | 35.0% | |
| GACATTTACTTGGAAGTGAT+GGG | + | tig0023342:72095-72114 | Msa1408050:CDS | 35.0% | |
| ACATTTACTTGGAAGTGATG+GGG | + | tig0023342:72096-72115 | Msa1408050:CDS | 35.0% | |
| TACTTTCAGAGTTGGAGAAT+CGG | + | tig0023342:72151-72170 | Msa1408050:CDS | 35.0% | |
| TTCCATTCCACGATACTTAT+TGG | + | tig0023342:72333-72352 | Msa1408050:intron | 35.0% | |
| ! | ATCCAATAAGTATCGTGGAA+TGG | - | tig0023342:72338-72357 | None:intergenic | 35.0% |
| TTGTCCTTTAAACAGGGTAT+TGG | + | tig0023342:72817-72836 | Msa1408050:intron | 35.0% | |
| TAAGTTACATACCAGGTGAT+TGG | - | tig0023342:72898-72917 | None:intergenic | 35.0% | |
| ! | TCAAAGCTAAAAGGTACAGA+AGG | - | tig0023342:73144-73163 | None:intergenic | 35.0% |
| TCTTAGCCGTTACTTGTAAA+TGG | - | tig0023342:73191-73210 | None:intergenic | 35.0% | |
| TTTCATATGCTGTAGTTTCG+GGG | + | tig0023342:73348-73367 | Msa1408050:CDS | 35.0% | |
| ! | TCCTAATGGCAACTTCATTT+TGG | + | tig0023342:73636-73655 | Msa1408050:intron | 35.0% |
| !! | CTTTTATTTCTCAGTACTGC+TGG | + | tig0023342:73732-73751 | Msa1408050:CDS | 35.0% |
| !! | TTTGGGTAAGGCCTATTTTT+CGG | + | tig0023342:73757-73776 | Msa1408050:intron | 35.0% |
| ACATCTGCAAACATTGATGA+AGG | - | tig0023342:73801-73820 | None:intergenic | 35.0% | |
| TTCCCATGTTTCAAATAGCA+TGG | + | tig0023342:73901-73920 | Msa1408050:CDS | 35.0% | |
| ! | GTCCATGCTATTTGAAACAT+GGG | - | tig0023342:73906-73925 | None:intergenic | 35.0% |
| ! | TGTCCATGCTATTTGAAACA+TGG | - | tig0023342:73907-73926 | None:intergenic | 35.0% |
| ACATTCTTCTCAATCTGTAC+AGG | + | tig0023342:73924-73943 | Msa1408050:CDS | 35.0% | |
| CTACTCCTACTTTGATGAAA+TGG | + | tig0023342:74093-74112 | Msa1408050:intron | 35.0% | |
| !! | ACTTGGTTTGGTAGTGTTAT+TGG | + | tig0023342:74315-74334 | Msa1408050:intron | 35.0% |
| TCTAGTATTCCCCAACAAAT+AGG | + | tig0023342:74420-74439 | Msa1408050:intron | 35.0% | |
| CTAGTATTCCCCAACAAATA+GGG | + | tig0023342:74421-74440 | Msa1408050:intron | 35.0% | |
| TAGTATTCCCCAACAAATAG+GGG | + | tig0023342:74422-74441 | Msa1408050:intron | 35.0% | |
| AATTCGGCTAGAAGAGAATA+TGG | + | tig0023342:74482-74501 | Msa1408050:intron | 35.0% | |
| ATTCGGCTAGAAGAGAATAT+GGG | + | tig0023342:74483-74502 | Msa1408050:intron | 35.0% | |
| !! | CTCAACTTGCTATAACAGTA+TGG | - | tig0023342:74553-74572 | None:intergenic | 35.0% |
| CATACTGTTATAGCAAGTTG+AGG | + | tig0023342:74551-74570 | Msa1408050:intron | 35.0% | |
| !! | GCTTATATGTTGCTATTTCC+TGG | + | tig0023342:74660-74679 | Msa1408050:intron | 35.0% |
| TGATTAAATCGGCATATCTC+CGG | + | tig0023342:74738-74757 | Msa1408050:intron | 35.0% | |
| ! | ACAACTATGGGAATCTTTTG+AGG | + | tig0023342:74767-74786 | Msa1408050:intron | 35.0% |
| !!! | AAGACCTTATTTTCCTCTTG+AGG | + | tig0023342:74798-74817 | Msa1408050:intron | 35.0% |
| TTGTCCTCAAGAGGAAAATA+AGG | - | tig0023342:74805-74824 | None:intergenic | 35.0% | |
| ! | TTATTTTCCTCTTGAGGACA+AGG | + | tig0023342:74804-74823 | Msa1408050:intron | 35.0% |
| !! | GAGAAGTACTTATAGGTACA+CGG | + | tig0023342:74840-74859 | Msa1408050:intron | 35.0% |
| AGAGTAGGTAGTTAGTTACT+GGG | + | tig0023342:74953-74972 | Msa1408050:intron | 35.0% | |
| GTTAGGAAAAGAGATAACAC+AGG | + | tig0023342:74986-75005 | Msa1408050:intron | 35.0% | |
| AAAACCATACATTCAGACCT+GGG | - | tig0023342:75026-75045 | None:intergenic | 35.0% | |
| ACAGAGATGATAGAAGGATA+GGG | - | tig0023342:75052-75071 | None:intergenic | 35.0% | |
| AACAGAGATGATAGAAGGAT+AGG | - | tig0023342:75053-75072 | None:intergenic | 35.0% | |
| CGAAAAACAGAGATGATAGA+AGG | - | tig0023342:75058-75077 | None:intergenic | 35.0% | |
| CCAGTGTATTGTGTATATCT+TGG | - | tig0023342:75147-75166 | None:intergenic | 35.0% | |
| CCAAGATATACACAATACAC+TGG | + | tig0023342:75144-75163 | Msa1408050:intron | 35.0% | |
| CAGTTAAGAATCATCATGCA+AGG | - | tig0023342:75365-75384 | None:intergenic | 35.0% | |
| ! | TTAACAGAAAGCATACTAGG+AGG | - | tig0023342:75623-75642 | None:intergenic | 35.0% |
| TCCTAGTATGCTTTCTGTTA+AGG | + | tig0023342:75622-75641 | Msa1408050:intron | 35.0% | |
| ! | TCCTTAACAGAAAGCATACT+AGG | - | tig0023342:75626-75645 | None:intergenic | 35.0% |
| AACAGGTATTTGACACGTTA+AGG | + | tig0023342:75850-75869 | Msa1408050:intron | 35.0% | |
| GTTCATTGGTATTTCTTTGC+TGG | + | tig0023342:75905-75924 | Msa1408050:CDS | 35.0% | |
| ! | CTATAAACCGAGGTATTCAA+AGG | + | tig0023342:75979-75998 | Msa1408050:intron | 35.0% |
| !! | TTTGTTTCTGTTGAAATGGC+AGG | - | tig0023342:76076-76095 | None:intergenic | 35.0% |
| !! | CCTCTTTGTTTCTGTTGAAA+TGG | - | tig0023342:76080-76099 | None:intergenic | 35.0% |
| CCATTTCAACAGAAACAAAG+AGG | + | tig0023342:76077-76096 | Msa1408050:CDS | 35.0% | |
| ATTTAAAAGACGTCCCTGAA+AGG | + | tig0023342:76143-76162 | Msa1408050:intron | 35.0% | |
| GATTACAGATATTCTGGTCA+AGG | + | tig0023342:76446-76465 | Msa1408050:CDS | 35.0% | |
| CTTATCGAAACTGATAGCAT+CGG | - | tig0023342:76513-76532 | None:intergenic | 35.0% | |
| TCTGCAAATAGACAGAAACT+TGG | - | tig0023342:76543-76562 | None:intergenic | 35.0% | |
| TATCGATGAGAAATTCTGGT+TGG | + | tig0023342:76689-76708 | Msa1408050:CDS | 35.0% | |
| TTTGTTGCATCTTCATCCAT+AGG | - | tig0023342:76724-76743 | None:intergenic | 35.0% | |
| !!! | TTATCCTTTTTTCCTTAGGG+GGG | - | tig0023342:76926-76945 | None:intergenic | 35.0% |
| ! | ATAAAGGGTATGCATGATGT+TGG | + | tig0023342:77041-77060 | Msa1408050:three_prime_UTR | 35.0% |
| !! | GAAGATGTTGATAACCGAGT+GGG | + | tig0023342:69535-69554 | Msa1408050:intron | 40.0% |
| !! | CGTTTTTCTGGGAAGAAATG+AGG | + | tig0023342:69615-69634 | Msa1408050:intron | 40.0% |
| GGAAGAAATGAGGGAATATG+CGG | + | tig0023342:69625-69644 | Msa1408050:intron | 40.0% | |
| !! | GTTGGGTTGAATTGAATCGA+AGG | - | tig0023342:70072-70091 | None:intergenic | 40.0% |
| !!! | GTTTTGAAACTGGTTTCGCT+TGG | + | tig0023342:70520-70539 | Msa1408050:five_prime_UTR | 40.0% |
| ! | GGAGCTTTCATCAACCTTTT+TGG | + | tig0023342:70696-70715 | Msa1408050:CDS | 40.0% |
| GGGACCAATCTTCTCAAATT+AGG | + | tig0023342:70738-70757 | Msa1408050:CDS | 40.0% | |
| TCATATACCACAAGTGACAC+GGG | + | tig0023342:70856-70875 | Msa1408050:intron | 40.0% | |
| !! | GTTCAAGTTGAATGGTTCTC+AGG | + | tig0023342:70941-70960 | Msa1408050:intron | 40.0% |
| GTTCGCAATGTTGAATGAGA+CGG | + | tig0023342:71030-71049 | Msa1408050:intron | 40.0% | |
| GTAAGACTAGACTTGAGTGT+TGG | + | tig0023342:71109-71128 | Msa1408050:intron | 40.0% | |
| !! | GATGATGGGAAACTCAGTAT+AGG | + | tig0023342:71153-71172 | Msa1408050:intron | 40.0% |
| GTATAGGTTGTTTGGGCATT+TGG | + | tig0023342:71169-71188 | Msa1408050:intron | 40.0% | |
| TTGATGTACCCAACCTTACT+TGG | + | tig0023342:71351-71370 | Msa1408050:intron | 40.0% | |
| CTTATTCCACCAAGTAAGGT+TGG | - | tig0023342:71363-71382 | None:intergenic | 40.0% | |
| ! | GTGGAATAAGACTTGGTTGT+TGG | + | tig0023342:71373-71392 | Msa1408050:intron | 40.0% |
| ! | GAATAAGACTTGGTTGTTGG+TGG | + | tig0023342:71376-71395 | Msa1408050:intron | 40.0% |
| !! | ATGTTGTGAATAAGGTGCTG+AGG | + | tig0023342:71560-71579 | Msa1408050:intron | 40.0% |
| !!! | AGGTGCTGAGGTATATCTTT+TGG | + | tig0023342:71572-71591 | Msa1408050:intron | 40.0% |
| ! | ATAAGGGTATGTTTGGATGG+AGG | + | tig0023342:71661-71680 | Msa1408050:intron | 40.0% |
| !! | ATGGAGGATTTTTGGGAGTA+GGG | + | tig0023342:71677-71696 | Msa1408050:intron | 40.0% |
| ATGCCTTCGATCAGAAGATT+TGG | - | tig0023342:72446-72465 | None:intergenic | 40.0% | |
| GCAACCAATACCCTGTTTAA+AGG | - | tig0023342:72824-72843 | None:intergenic | 40.0% | |
| TCCAAGAACAATGAAAGCTG+TGG | - | tig0023342:72846-72865 | None:intergenic | 40.0% | |
| TTTGGAAATCACCAATCACC+TGG | + | tig0023342:72884-72903 | Msa1408050:CDS | 40.0% | |
| TATTTCTCTGTCAACTGCTC+TGG | - | tig0023342:73106-73125 | None:intergenic | 40.0% | |
| !! | GAACTTCTGCTTGCTATATC+AGG | + | tig0023342:73287-73306 | Msa1408050:CDS | 40.0% |
| ACATGACCTCAAACCCATTT+GGG | + | tig0023342:73310-73329 | Msa1408050:CDS | 40.0% | |
| TTCATATGCTGTAGTTTCGG+GGG | + | tig0023342:73349-73368 | Msa1408050:CDS | 40.0% | |
| GTAGCAGACTTACAGTGATT+TGG | - | tig0023342:73402-73421 | None:intergenic | 40.0% | |
| ! | ACACTTTCCATCAAAGGTGT+CGG | - | tig0023342:73461-73480 | None:intergenic | 40.0% |
| ! | ATGTAATCATGTGTCGGTGT+CGG | - | tig0023342:73512-73531 | None:intergenic | 40.0% |
| !! | TGAACTACTAAGCACTGACA+CGG | - | tig0023342:73586-73605 | None:intergenic | 40.0% |
| GCCAAAATGAAGTTGCCATT+AGG | - | tig0023342:73640-73659 | None:intergenic | 40.0% | |
| ! | TTACGACTGGCTATGTCTAA+TGG | + | tig0023342:73672-73691 | Msa1408050:CDS | 40.0% |
| ! | TTCTCAGTACTGCTGGATTT+TGG | + | tig0023342:73739-73758 | Msa1408050:CDS | 40.0% |
| ! | TCTCAGTACTGCTGGATTTT+GGG | + | tig0023342:73740-73759 | Msa1408050:CDS | 40.0% |
| ! | CAGATGACTAGGTTGAATGA+AGG | + | tig0023342:73849-73868 | Msa1408050:intron | 40.0% |
| TTTATAGCTTCTCCTTGCCA+CGG | + | tig0023342:74030-74049 | Msa1408050:intron | 40.0% | |
| GGAGTCCATTTCATCAAAGT+AGG | - | tig0023342:74101-74120 | None:intergenic | 40.0% | |
| ! | TTGATGAAATGGACTCCCTT+AGG | + | tig0023342:74104-74123 | Msa1408050:intron | 40.0% |
| ! | GGTAGTGTTATTGGTAGATG+TGG | + | tig0023342:74324-74343 | Msa1408050:intron | 40.0% |
| TAGATGTGGCAGTTACGAAA+GGG | + | tig0023342:74338-74357 | Msa1408050:intron | 40.0% | |
| AGTATTCCCCAACAAATAGG+GGG | + | tig0023342:74423-74442 | Msa1408050:intron | 40.0% | |
| TTCGGCTAGAAGAGAATATG+GGG | + | tig0023342:74484-74503 | Msa1408050:intron | 40.0% | |
| ! | AGGAAGTATACACACAGACA+TGG | - | tig0023342:74525-74544 | None:intergenic | 40.0% |
| TGTCTGTGTGTATACTTCCT+AGG | + | tig0023342:74525-74544 | Msa1408050:intron | 40.0% | |
| GCTATAACAGTATGGTACCT+AGG | - | tig0023342:74545-74564 | None:intergenic | 40.0% | |
| GACTATTGTCTTGAAGAGCA+AGG | - | tig0023342:74708-74727 | None:intergenic | 40.0% | |
| ! | CAGTGAGCTGCTGATTAAAT+CGG | + | tig0023342:74727-74746 | Msa1408050:intron | 40.0% |
| ! | AGGACAAGGTGAACGTTTTA+TGG | + | tig0023342:74818-74837 | Msa1408050:intron | 40.0% |
| !! | CTACGAAAGCATTTGTGAAG+AGG | + | tig0023342:74866-74885 | Msa1408050:intron | 40.0% |
| CAGAGTAGGTAGTTAGTTAC+TGG | + | tig0023342:74952-74971 | Msa1408050:intron | 40.0% | |
| TACTGGGAACGAATTCAGTT+AGG | + | tig0023342:74969-74988 | Msa1408050:intron | 40.0% | |
| CAAAACCATACATTCAGACC+TGG | - | tig0023342:75027-75046 | None:intergenic | 40.0% | |
| CAGAGATGATAGAAGGATAG+GGG | - | tig0023342:75051-75070 | None:intergenic | 40.0% | |
| ACGAAGAACGTAAACTCGAT+AGG | + | tig0023342:75468-75487 | Msa1408050:intron | 40.0% | |
| GGAATGATGTGTGTGTTCAT+TGG | + | tig0023342:75891-75910 | Msa1408050:CDS | 40.0% | |
| AGATATTCTGGTCAAGGCAA+AGG | + | tig0023342:76452-76471 | Msa1408050:CDS | 40.0% | |
| ACTTCTTGTGCACTATCTCT+TGG | + | tig0023342:76562-76581 | Msa1408050:CDS | 40.0% | |
| ! | TGTGCACTATCTCTTGGTTT+TGG | + | tig0023342:76568-76587 | Msa1408050:CDS | 40.0% |
| !! | GTGCACTATCTCTTGGTTTT+GGG | + | tig0023342:76569-76588 | Msa1408050:CDS | 40.0% |
| !!! | TGCACTATCTCTTGGTTTTG+GGG | + | tig0023342:76570-76589 | Msa1408050:CDS | 40.0% |
| TCAAGAATGAATGGCTTCAG+AGG | + | tig0023342:76640-76659 | Msa1408050:CDS | 40.0% | |
| TGGTTGGAGCAAAATACCTA+TGG | + | tig0023342:76705-76724 | Msa1408050:CDS | 40.0% | |
| AACAAACACTATCAAGGGCT+AGG | - | tig0023342:76775-76794 | None:intergenic | 40.0% | |
| !! | GGAAGATGTTGATAACCGAG+TGG | + | tig0023342:69534-69553 | Msa1408050:intron | 45.0% |
| GTGGTCGAAAACAGCTTCAT+CGG | + | tig0023342:69557-69576 | Msa1408050:intron | 45.0% | |
| ! | AGTCTGCGTCACGTTTTTCT+GGG | + | tig0023342:69604-69623 | Msa1408050:intron | 45.0% |
| ! | TGCATGTGGTGTCTGTTTTG+TGG | + | tig0023342:70638-70657 | Msa1408050:five_prime_UTR | 45.0% |
| ! | ATCTTTTATCCATGGGGGAG+TGG | + | tig0023342:70667-70686 | Msa1408050:exon | 45.0% |
| ! | TCTTTTATCCATGGGGGAGT+GGG | + | tig0023342:70668-70687 | Msa1408050:exon | 45.0% |
| TATGTATATGCACGGTCGCA+CGG | + | tig0023342:70825-70844 | Msa1408050:intron | 45.0% | |
| !! | TACTTTACCCGTGTCACTTG+TGG | - | tig0023342:70866-70885 | None:intergenic | 45.0% |
| ! | AGTGACACGGGTAAAGTATC+TGG | + | tig0023342:70868-70887 | Msa1408050:intron | 45.0% |
| TGTTGAATGAGACGGAGTGT+TGG | + | tig0023342:71038-71057 | Msa1408050:intron | 45.0% | |
| ! | GTTGAATGAGACGGAGTGTT+GGG | + | tig0023342:71039-71058 | Msa1408050:intron | 45.0% |
| !! | ACTAGACTTGAGTGTTGGGA+TGG | + | tig0023342:71114-71133 | Msa1408050:intron | 45.0% |
| ATGTACCCAACCTTACTTGG+TGG | + | tig0023342:71354-71373 | Msa1408050:intron | 45.0% | |
| !! | GATGGAGGATTTTTGGGAGT+AGG | + | tig0023342:71676-71695 | Msa1408050:intron | 45.0% |
| !! | TGGAGGATTTTTGGGAGTAG+GGG | + | tig0023342:71678-71697 | Msa1408050:intron | 45.0% |
| TCAGAGTTGGAGAATCGGTA+TGG | + | tig0023342:72156-72175 | Msa1408050:intron | 45.0% | |
| GCACCAAATCTTCTGATCGA+AGG | + | tig0023342:72440-72459 | Msa1408050:intron | 45.0% | |
| ! | GTATTCACATGTGTCGGTGT+CGG | - | tig0023342:72489-72508 | None:intergenic | 45.0% |
| !! | TCAAGCACTGACACGAACAT+CGG | - | tig0023342:72567-72586 | None:intergenic | 45.0% |
| GCGGAGGAAATAGAAGACAT+AGG | - | tig0023342:72617-72636 | None:intergenic | 45.0% | |
| AAAGCTGCAAGAAGTGACTG+CGG | - | tig0023342:72636-72655 | None:intergenic | 45.0% | |
| CAGTCACTTCTTGCAGCTTT+GGG | + | tig0023342:72636-72655 | Msa1408050:intron | 45.0% | |
| ACACAAAGTAAGCGAATGCG+AGG | - | tig0023342:72683-72702 | None:intergenic | 45.0% | |
| GCCACAGCTTTCATTGTTCT+TGG | + | tig0023342:72842-72861 | Msa1408050:CDS | 45.0% | |
| AAATGTGAAATGTGCAGGCG+AGG | + | tig0023342:73263-73282 | Msa1408050:intron | 45.0% | |
| GACATGACCTCAAACCCATT+TGG | + | tig0023342:73309-73328 | Msa1408050:CDS | 45.0% | |
| CATGACCTCAAACCCATTTG+GGG | + | tig0023342:73311-73330 | Msa1408050:CDS | 45.0% | |
| GGCAATAGCATACCCCAAAT+GGG | - | tig0023342:73326-73345 | None:intergenic | 45.0% | |
| !! | CCTTTGATGGAAAGTGTCTC+CGG | + | tig0023342:73464-73483 | Msa1408050:intron | 45.0% |
| TTACGGATGTGTCAGTGTCT+TGG | + | tig0023342:73557-73576 | Msa1408050:intron | 45.0% | |
| ! | CAGTTCTAACCTCTTACGAC+TGG | + | tig0023342:73659-73678 | Msa1408050:intron | 45.0% |
| TAGACATAGCCAGTCGTAAG+AGG | - | tig0023342:73671-73690 | None:intergenic | 45.0% | |
| !! | GTACTGCTGGATTTTGGGTA+AGG | + | tig0023342:73745-73764 | Msa1408050:intron | 45.0% |
| TTAACTTCTTCGAGTGTCCG+TGG | - | tig0023342:74050-74069 | None:intergenic | 45.0% | |
| GTAGATGTGGCAGTTACGAA+AGG | + | tig0023342:74337-74356 | Msa1408050:intron | 45.0% | |
| !! | TACGAAAGGGTGGTGTTGTT+TGG | + | tig0023342:74351-74370 | Msa1408050:intron | 45.0% |
| ACTAGATCGCTGCTAATGAC+AGG | - | tig0023342:74406-74425 | None:intergenic | 45.0% | |
| TTGCTGACCCCCTATTTGTT+GGG | - | tig0023342:74433-74452 | None:intergenic | 45.0% | |
| TTTGCTGACCCCCTATTTGT+TGG | - | tig0023342:74434-74453 | None:intergenic | 45.0% | |
| AAATAGGGGGTCAGCAAAGT+AGG | + | tig0023342:74436-74455 | Msa1408050:intron | 45.0% | |
| ! | CAAGTTGAGGTAGCAATCGT+TGG | + | tig0023342:74564-74583 | Msa1408050:intron | 45.0% |
| TAGCAATCGTTGGCACATTC+AGG | + | tig0023342:74574-74593 | Msa1408050:intron | 45.0% | |
| TTGGCACATTCAGGAATGAG+AGG | + | tig0023342:74583-74602 | Msa1408050:intron | 45.0% | |
| AGGATGTCTTCCAATTCCGT+CGG | - | tig0023342:74688-74707 | None:intergenic | 45.0% | |
| TTCCCATAGTTGTCACAGTC+CGG | - | tig0023342:74760-74779 | None:intergenic | 45.0% | |
| AATAGGGGGTTTAGCAGAGT+AGG | + | tig0023342:74938-74957 | Msa1408050:intron | 45.0% | |
| TTAGGGATGCAAATGGGACA+CGG | + | tig0023342:75319-75338 | Msa1408050:intron | 45.0% | |
| ! | GAAAGCATACTAGGAGGTTC+CGG | - | tig0023342:75617-75636 | None:intergenic | 45.0% |
| CTGGCACCTGATGAATCAAA+AGG | + | tig0023342:75924-75943 | Msa1408050:CDS | 45.0% | |
| TGAAATGGCAGGAGACACTA+CGG | - | tig0023342:76065-76084 | None:intergenic | 45.0% | |
| ! | GTCTTTGCTGTGTGCTTCTT+CGG | - | tig0023342:76394-76413 | None:intergenic | 45.0% |
| ! | AGACGCGAGATCTTTTGTCA+AGG | + | tig0023342:76410-76429 | Msa1408050:CDS | 45.0% |
| ! | GACGCGAGATCTTTTGTCAA+GGG | + | tig0023342:76411-76430 | Msa1408050:CDS | 45.0% |
| !!! | ACTATCTCTTGGTTTTGGGG+AGG | + | tig0023342:76573-76592 | Msa1408050:CDS | 45.0% |
| ATGAATGGCTTCAGAGGCAA+TGG | + | tig0023342:76646-76665 | Msa1408050:CDS | 45.0% | |
| AAACACTATCAAGGGCTAGG+AGG | - | tig0023342:76772-76791 | None:intergenic | 45.0% | |
| ! | TGTTTGTTAGTCATCGCCGT+AGG | + | tig0023342:76787-76806 | Msa1408050:three_prime_UTR | 45.0% |
| CGAAAACCTGGGAAATCCTA+CGG | - | tig0023342:76806-76825 | None:intergenic | 45.0% | |
| TTCATGATTCTTCCCCCCTA+AGG | + | tig0023342:76911-76930 | Msa1408050:three_prime_UTR | 45.0% | |
| TCTTCCCCCCTAAGGAAAAA+AGG | + | tig0023342:76919-76938 | Msa1408050:three_prime_UTR | 45.0% | |
| !!! | TTAATTTTTCAAATTTTTTA+CGG | + | tig0023342:73540-73559 | Msa1408050:intron | 5.0% |
| !! | GATGTTGATAACCGAGTGGG+TGG | + | tig0023342:69538-69557 | Msa1408050:intron | 50.0% |
| ! | GAGTCTGCGTCACGTTTTTC+TGG | + | tig0023342:69603-69622 | Msa1408050:intron | 50.0% |
| !! | GATTTTTGGGAGTAGGGGAG+AGG | + | tig0023342:71683-71702 | Msa1408050:intron | 50.0% |
| ! | CTTGGAAGTGATGGGGTACA+TGG | + | tig0023342:72103-72122 | Msa1408050:CDS | 50.0% |
| TTCCTTTGGCTATGCTGCTC+AGG | + | tig0023342:72305-72324 | Msa1408050:CDS | 50.0% | |
| TACCTGAGCAGCATAGCCAA+AGG | - | tig0023342:72310-72329 | None:intergenic | 50.0% | |
| ACTGACACGAACATCGGACA+CGG | - | tig0023342:72561-72580 | None:intergenic | 50.0% | |
| GCAGTCACTTCTTGCAGCTT+TGG | + | tig0023342:72635-72654 | Msa1408050:intron | 50.0% | |
| GTACAGAAGGAACGCGACAT+TGG | - | tig0023342:73131-73150 | None:intergenic | 50.0% | |
| ! | GCATACCCCAAATGGGTTTG+AGG | - | tig0023342:73319-73338 | None:intergenic | 50.0% |
| CGGCAATAGCATACCCCAAA+TGG | - | tig0023342:73327-73346 | None:intergenic | 50.0% | |
| CCGGAGACACTTTCCATCAA+AGG | - | tig0023342:73467-73486 | None:intergenic | 50.0% | |
| ATGTGGCAGTTACGAAAGGG+TGG | + | tig0023342:74341-74360 | Msa1408050:intron | 50.0% | |
| ! | TGCTGACCCCCTATTTGTTG+GGG | - | tig0023342:74432-74451 | None:intergenic | 50.0% |
| !! | TCCATTAGAGGTGCTAGCGA+AGG | + | tig0023342:74626-74645 | Msa1408050:intron | 50.0% |
| ACCTTCGCTAGCACCTCTAA+TGG | - | tig0023342:74630-74649 | None:intergenic | 50.0% | |
| !! | TTAGAGGTGCTAGCGAAGGT+AGG | + | tig0023342:74630-74649 | Msa1408050:intron | 50.0% |
| TGCTAGCGAAGGTAGGATCA+GGG | + | tig0023342:74637-74656 | Msa1408050:intron | 50.0% | |
| !! | TTGCTATTTCCTGGGACCGA+CGG | + | tig0023342:74669-74688 | Msa1408050:intron | 50.0% |
| TCTCCGGACTGTGACAACTA+TGG | + | tig0023342:74754-74773 | Msa1408050:intron | 50.0% | |
| CTCCGGACTGTGACAACTAT+GGG | + | tig0023342:74755-74774 | Msa1408050:intron | 50.0% | |
| ACGTTCACCTTGTCCTCAAG+AGG | - | tig0023342:74814-74833 | None:intergenic | 50.0% | |
| TCAGACCTGGGCGAATTCAT+GGG | - | tig0023342:75014-75033 | None:intergenic | 50.0% | |
| TTCAGACCTGGGCGAATTCA+TGG | - | tig0023342:75015-75034 | None:intergenic | 50.0% | |
| TTCGCCCAGGTCTGAATGTA+TGG | + | tig0023342:75019-75038 | Msa1408050:intron | 50.0% | |
| GCAAATGGGACACGGCAATA+TGG | + | tig0023342:75327-75346 | Msa1408050:intron | 50.0% | |
| AACTTGACTGCATGCCTGCT+AGG | + | tig0023342:75530-75549 | Msa1408050:intron | 50.0% | |
| ! | TCAGAGGCAATGGACTCGAA+CGG | + | tig0023342:76656-76675 | Msa1408050:CDS | 50.0% |
| !! | GCTGTTTTCGACCACCCACT+CGG | - | tig0023342:69552-69571 | None:intergenic | 55.0% |
| !! | TTTTGGGAGTAGGGGAGAGG+AGG | + | tig0023342:71686-71705 | Msa1408050:intron | 55.0% |
| GCTGTAGTTTCGGGGGCTAT+AGG | + | tig0023342:73356-73375 | Msa1408050:CDS | 55.0% | |
| !! | CAAAGGTGTCGGTGCTGCAA+AGG | - | tig0023342:73450-73469 | None:intergenic | 55.0% |
| !! | TGCAGCACCGACACCTTTGA+TGG | + | tig0023342:73451-73470 | Msa1408050:intron | 55.0% |
| ATGGCTATCAGCTGCACAGC+TGG | + | tig0023342:73691-73710 | Msa1408050:CDS | 55.0% | |
| TTCTTCGAGTGTCCGTGGCA+AGG | - | tig0023342:74045-74064 | None:intergenic | 55.0% | |
| AGGGGGTCAGCAAAGTAGGT+TGG | + | tig0023342:74440-74459 | Msa1408050:intron | 55.0% | |
| GGGGGTCAGCAAAGTAGGTT+GGG | + | tig0023342:74441-74460 | Msa1408050:intron | 55.0% | |
| ! | GGTCAGCAAAGTAGGTTGGG+AGG | + | tig0023342:74444-74463 | Msa1408050:intron | 55.0% |
| GTGCTAGCGAAGGTAGGATC+AGG | + | tig0023342:74636-74655 | Msa1408050:intron | 55.0% | |
| GCTAGCGAAGGTAGGATCAG+GGG | + | tig0023342:74638-74657 | Msa1408050:intron | 55.0% | |
| TTTCCTGGGACCGACGGAAT+TGG | + | tig0023342:74675-74694 | Msa1408050:intron | 55.0% | |
| TGCCTGCTAGGTGAGGTATG+CGG | + | tig0023342:75542-75561 | Msa1408050:intron | 55.0% | |
| GCATACTAGGAGGTTCCGGA+AGG | - | tig0023342:75613-75632 | None:intergenic | 55.0% | |
| TCATCGCCGTAGGATTTCCC+AGG | + | tig0023342:76797-76816 | Msa1408050:three_prime_UTR | 55.0% | |
| !! | TCCATGGGGGAGTGGGTTGT+TGG | + | tig0023342:70675-70694 | Msa1408050:exon | 60.0% |
| TCCAACAACCCACTCCCCCA+TGG | - | tig0023342:70679-70698 | None:intergenic | 60.0% | |
| GCTGCAAGAAGTGACTGCGG+AGG | - | tig0023342:72633-72652 | None:intergenic | 60.0% | |
| !! | TCGGTGTCGTGTAGACGCGT+CGG | - | tig0023342:73493-73512 | None:intergenic | 60.0% |
| CTTCCAATTCCGTCGGTCCC+AGG | - | tig0023342:74681-74700 | None:intergenic | 60.0% | |
| AGGTGCCCATGAATTCGCCC+AGG | + | tig0023342:75006-75025 | Msa1408050:intron | 60.0% | |
| GACTGCATGCCTGCTAGGTG+AGG | + | tig0023342:75535-75554 | Msa1408050:intron | 60.0% | |
| AGCCGCATACCTCACCTAGC+AGG | - | tig0023342:75547-75566 | None:intergenic | 60.0% | |
| CGTGTAGACGCGTCGGACAC+CGG | - | tig0023342:73486-73505 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023342 | gene | 69514 | 77065 | 69514 | ID=Msa1408050;Name=Msa1408050 |
| tig0023342 | mRNA | 69514 | 77065 | 69514 | ID=Msa1408050-mRNA-1;Parent=Msa1408050;Name=Msa1408050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=420|1|1|1|0.85|0.8|15|282|442 |
| tig0023342 | exon | 69514 | 69529 | 69514 | ID=Msa1408050-mRNA-1:exon:25400;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 69899 | 70132 | 69899 | ID=Msa1408050-mRNA-1:exon:25401;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 70508 | 70770 | 70508 | ID=Msa1408050-mRNA-1:exon:25402;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 72088 | 72172 | 72088 | ID=Msa1408050-mRNA-1:exon:25403;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 72265 | 72326 | 72265 | ID=Msa1408050-mRNA-1:exon:25404;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 72639 | 72724 | 72639 | ID=Msa1408050-mRNA-1:exon:25405;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 72832 | 72905 | 72832 | ID=Msa1408050-mRNA-1:exon:25406;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 73095 | 73197 | 73095 | ID=Msa1408050-mRNA-1:exon:25407;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 73280 | 73408 | 73280 | ID=Msa1408050-mRNA-1:exon:25408;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 73662 | 73761 | 73662 | ID=Msa1408050-mRNA-1:exon:25409;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 73852 | 73971 | 73852 | ID=Msa1408050-mRNA-1:exon:25410;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 75855 | 75945 | 75855 | ID=Msa1408050-mRNA-1:exon:25411;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 76032 | 76098 | 76032 | ID=Msa1408050-mRNA-1:exon:25412;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 76377 | 76473 | 76377 | ID=Msa1408050-mRNA-1:exon:25413;Parent=Msa1408050-mRNA-1 |
| tig0023342 | exon | 76562 | 77065 | 76562 | ID=Msa1408050-mRNA-1:exon:25414;Parent=Msa1408050-mRNA-1 |
| tig0023342 | five_prime_UTR | 69514 | 69529 | 69514 | ID=Msa1408050-mRNA-1:five_prime_utr;Parent=Msa1408050-mRNA-1 |
| tig0023342 | five_prime_UTR | 69899 | 70132 | 69899 | ID=Msa1408050-mRNA-1:five_prime_utr;Parent=Msa1408050-mRNA-1 |
| tig0023342 | five_prime_UTR | 70508 | 70677 | 70508 | ID=Msa1408050-mRNA-1:five_prime_utr;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 70678 | 70770 | 70678 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 72088 | 72172 | 72088 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 72265 | 72326 | 72265 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 72639 | 72724 | 72639 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 72832 | 72905 | 72832 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 73095 | 73197 | 73095 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 73280 | 73408 | 73280 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 73662 | 73761 | 73662 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 73852 | 73971 | 73852 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 75855 | 75945 | 75855 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 76032 | 76098 | 76032 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 76377 | 76473 | 76377 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | CDS | 76562 | 76783 | 76562 | ID=Msa1408050-mRNA-1:cds;Parent=Msa1408050-mRNA-1 |
| tig0023342 | three_prime_UTR | 76784 | 77065 | 76784 | ID=Msa1408050-mRNA-1:three_prime_utr;Parent=Msa1408050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
