AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1076960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076960 MtrunA17_Chr4g0047461 70.130 154 41 2 1 149 101 254 8.54e-70 211
Msa1076960 MtrunA17_Chr7g0261121 70.588 153 40 2 1 148 228 380 7.68e-68 210
Msa1076960 MtrunA17_Chr8g0378641 60.390 154 55 3 2 150 232 384 2.90e-59 188
Msa1076960 MtrunA17_Chr7g0261161 76.596 94 17 2 1 89 1 94 6.53e-41 134
Msa1076960 MtrunA17_Chr5g0435201 45.946 148 65 4 2 146 215 350 7.91e-27 103
Msa1076960 MtrunA17_Chr6g0488491 42.568 148 70 4 2 146 213 348 2.38e-23 94.0
Msa1076960 MtrunA17_Chr8g0371101 41.304 138 60 5 2 129 226 352 8.15e-20 84.3
Msa1076960 MtrunA17_Chr2g0300541 38.710 155 66 5 2 141 238 378 1.42e-19 84.0
Msa1076960 MtrunA17_Chr8g0371031 38.411 151 70 5 2 141 245 383 7.64e-19 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1076960 AT1G44080.1 32.847 137 72 6 2 129 194 319 1.74e-12 64.3
Msa1076960 AT1G65770.1 32.374 139 71 7 1 129 209 334 3.29e-11 60.5
Msa1076960 AT4G35733.1 30.769 130 81 3 2 127 209 333 6.14e-11 59.7

Find 102 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAACCTGCTGACAAATTT+TGG 0.080030 7_2:-75494557 Msa1076960:three_prime_UTR
ACTTTATGTTGTGGATAAAA+TGG 0.170692 7_2:-75494985 Msa1076960:three_prime_UTR
GAGTTGACTGTTTCCAATAT+TGG 0.239268 7_2:-75495086 Msa1076960:three_prime_UTR
AAGATTTGTATTTAAATTCA+TGG 0.258740 7_2:-75494361 Msa1076960:three_prime_UTR
TCCGTAGTGTTTGTAGATTT+TGG 0.264838 7_2:-75495535 Msa1076960:three_prime_UTR
GGGTGATGTTTCGTTTGTTT+TGG 0.269127 7_2:-75504840 Msa1076960:CDS
GTGCTGAAAATAGGAATATA+AGG 0.270273 7_2:-75494893 Msa1076960:three_prime_UTR
AGTCATCATGAAGATAAAAT+TGG 0.275568 7_2:-75495218 Msa1076960:three_prime_UTR
TGTACCATTGTGCTGAAAAT+AGG 0.276376 7_2:-75494902 Msa1076960:three_prime_UTR
ATGGTTAGATGTAAAAGATT+TGG 0.281291 7_2:-75504861 Msa1076960:intron
GAGATCAAAGAGATAAAGTT+TGG 0.285701 7_2:+75495337 None:intergenic
TGGTTCAATGCGGTATATTT+TGG 0.305635 7_2:+75495439 None:intergenic
TTTCAACTTGGAGAATTTAG+AGG 0.305854 7_2:-75504726 Msa1076960:CDS
GGGTGAGGTTTCGTTTGTTT+TGG 0.311852 7_2:-75494694 Msa1076960:three_prime_UTR
AAAGGAAAATATCATGTTAA+AGG 0.318603 7_2:-75495060 Msa1076960:three_prime_UTR
TTGATCAAGAATGGGGTAAA+TGG 0.326226 7_2:-75494734 Msa1076960:three_prime_UTR
ATGGTTAGAAGTAAAAGATT+TGG 0.332561 7_2:-75494715 Msa1076960:three_prime_UTR
AGACTCAAACATTGCATTGT+TGG 0.341865 7_2:-75504813 Msa1076960:CDS
TGGTTAGATGTAAAAGATTT+GGG 0.347718 7_2:-75504860 Msa1076960:intron
CAAATCTTCTTGAAGATTTG+TGG 0.347804 7_2:-75495604 Msa1076960:three_prime_UTR
ATTGGTATGATTTGTTCCTT+TGG 0.359415 7_2:-75494215 Msa1076960:three_prime_UTR
CAATGCTTTGTCTTTGAAGT+TGG 0.363091 7_2:-75505089 Msa1076960:CDS
TGGTTAGAAGTAAAAGATTT+GGG 0.374795 7_2:-75494714 Msa1076960:three_prime_UTR
CAATGCTCTTTCCTTGAAGT+TGG 0.381115 7_2:-75494946 Msa1076960:three_prime_UTR
CAGGACTTCTTGTTTCAACT+TGG 0.381282 7_2:-75504738 Msa1076960:CDS
CAAAAGGGGTTACTTCTTGA+AGG 0.384442 7_2:-75494781 Msa1076960:three_prime_UTR
TTGTGAGAGGCAGGTGGAGG+AGG 0.384893 7_2:+75495500 None:intergenic
AAATCTTCTTGAAGATTTGT+GGG 0.389413 7_2:-75495603 Msa1076960:three_prime_UTR
TTTATAAGCTTGATCAAGAA+TGG 0.392244 7_2:-75494743 Msa1076960:three_prime_UTR
TTTATAAGCTTGATCAAGAA+TGG 0.392244 7_2:-75504889 Msa1076960:CDS
CTTTATGTTGTGGATAAAAT+GGG 0.396836 7_2:-75494984 Msa1076960:three_prime_UTR
TCAACTTCTTGTTCTAATCA+AGG 0.402165 7_2:-75495395 Msa1076960:three_prime_UTR
ATGATGAAAGGTATTACAAA+AGG 0.404208 7_2:-75494797 Msa1076960:three_prime_UTR
CCAATCCAAAATTTGTCAGC+AGG 0.420447 7_2:+75494552 None:intergenic
TGATGAAAGGTATTACAAAA+GGG 0.432135 7_2:-75494796 Msa1076960:three_prime_UTR
TGAAAATTGAACCAACTTCA+AGG 0.432491 7_2:+75494935 None:intergenic
ATACAAATCTTCAATGAAGT+TGG 0.434056 7_2:+75494373 None:intergenic
TTGTTGGCTCGAGATTACTA+TGG 0.437431 7_2:-75494651 Msa1076960:three_prime_UTR
TGTTTCCAATATTGGAGAAA+AGG 0.445230 7_2:-75495078 Msa1076960:three_prime_UTR
TTATAAGCTTGATCAAGAAT+GGG 0.450966 7_2:-75494742 Msa1076960:three_prime_UTR
TTATAAGCTTGATCAAGAAT+GGG 0.450966 7_2:-75504888 Msa1076960:CDS
TCACTACTACCAATTGCAAT+TGG 0.463485 7_2:+75494264 None:intergenic
CAGATACCAGAAAAGGTGTA+AGG 0.464216 7_2:-75495732 Msa1076960:exon
TTCTATTCAGGGTCGTTGCA+TGG 0.467549 7_2:-75495132 Msa1076960:three_prime_UTR
TGATGATATAATACATTACA+AGG 0.467606 7_2:-75495012 Msa1076960:three_prime_UTR
CAAATCTTCAATGAAGTTGG+TGG 0.472728 7_2:+75494376 None:intergenic
ACATCTCTGCCAATTGCAAT+TGG 0.476089 7_2:-75494273 Msa1076960:three_prime_UTR
ATTTGTATATTGACGGTGAA+AGG 0.480910 7_2:-75504955 Msa1076960:CDS
GTAGTTGATTTGTATATTGA+CGG 0.484013 7_2:-75504962 Msa1076960:CDS
TCTACTTCTATTATGAAAGC+AGG 0.486961 7_2:-75494611 Msa1076960:three_prime_UTR
AGAGTTGTAGAATTGAACTT+AGG 0.498305 7_2:-75494322 Msa1076960:three_prime_UTR
CAAATTGGGTCACATATTGA+AGG 0.498468 7_2:-75504927 Msa1076960:CDS
CTTACAAATTAATTGATCAC+TGG 0.508472 7_2:+75494513 None:intergenic
TGCTGAAAATAGGAATATAA+GGG 0.509100 7_2:-75494892 Msa1076960:three_prime_UTR
ATCACTGGATGGAACAAAGT+TGG 0.510777 7_2:+75494528 None:intergenic
TGATTAGAACAAGAAGTTGA+AGG 0.514698 7_2:+75495398 None:intergenic
ATCAAAGAGATAAAGTTTGG+AGG 0.516104 7_2:+75495340 None:intergenic
GATTAGAACAAGAAGTTGAA+GGG 0.519595 7_2:+75495399 None:intergenic
ATTTATATATTAATGATGAA+AGG 0.523166 7_2:-75494809 Msa1076960:three_prime_UTR
ATTGGTAGTAGTGAATTCCT+TGG 0.529516 7_2:-75494255 Msa1076960:three_prime_UTR
CAAGGGACAACTTTATGTTG+TGG 0.530035 7_2:-75494994 Msa1076960:three_prime_UTR
GTGACAGGATGGAACAAAGT+TGG 0.530217 7_2:+75504674 None:intergenic
ATGCAAAGGTTGTGAGAGGC+AGG 0.537372 7_2:+75495491 None:intergenic
CAAATTAATTGATCACTGGA+TGG 0.540924 7_2:+75494517 None:intergenic
TGAAAAGCAGATACCAGAAA+AGG 0.545163 7_2:-75495739 Msa1076960:intron
CATATTGAAGGCTATTTGTG+TGG 0.549161 7_2:-75504915 Msa1076960:CDS
TGTTGGCTCGAGATTACTAT+GGG 0.552161 7_2:-75494650 Msa1076960:three_prime_UTR
AGGTTGTGAGAGGCAGGTGG+AGG 0.559115 7_2:+75495497 None:intergenic
CTTCTTGTTCTAATCAAGGT+GGG 0.559628 7_2:-75495391 Msa1076960:three_prime_UTR
GATGAAAGGTATTACAAAAG+GGG 0.559891 7_2:-75494795 Msa1076960:three_prime_UTR
AGAAGTAAAAGATTTGGGTG+AGG 0.564111 7_2:-75494709 Msa1076960:three_prime_UTR
AAACAATTAGTAGAGTCTGA+TGG 0.567913 7_2:-75504995 Msa1076960:CDS
GGGTTGTGATCATGTGGTGA+TGG 0.571859 7_2:+75495419 None:intergenic
AAAAGGTGTAAGGGACTAAG+TGG 0.572227 7_2:-75495722 Msa1076960:exon
GATGGATATGAATAAGATAG+TGG 0.582410 7_2:-75495639 Msa1076960:three_prime_UTR
CAAGATTACTACGGATGTGA+AGG 0.582722 7_2:-75504788 Msa1076960:CDS
TCTACTTCTATTGTGAAGAC+AGG 0.586419 7_2:-75504757 Msa1076960:CDS
CAAATTAACTCGTGACAGGA+TGG 0.587347 7_2:+75504663 None:intergenic
GCCAAAATCTACAAACACTA+CGG 0.595515 7_2:+75495534 None:intergenic
CTTACAAATTAACTCGTGAC+AGG 0.596567 7_2:+75504659 None:intergenic
TCTACAACTCTGCAACGGAT+AGG 0.597109 7_2:+75494334 None:intergenic
CTACTTCTATTATGAAAGCA+GGG 0.600724 7_2:-75494610 Msa1076960:three_prime_UTR
AGATACCAGAAAAGGTGTAA+GGG 0.606188 7_2:-75495731 Msa1076960:exon
GGAAGGCGCACCCTCATGCA+AGG 0.606710 7_2:-75494409 Msa1076960:three_prime_UTR
ACTTCTTGTTCTAATCAAGG+TGG 0.607280 7_2:-75495392 Msa1076960:three_prime_UTR
TGAAACAAAATCATATCCAA+AGG 0.608051 7_2:+75494199 None:intergenic
ATCATGTTAAAGGATGATTG+TGG 0.624512 7_2:-75495050 Msa1076960:three_prime_UTR
TTGTTGGCTCAAGATTACTA+CGG 0.627281 7_2:-75504797 Msa1076960:CDS
TATAAGCTTGATCAAGAATG+GGG 0.627945 7_2:-75494741 Msa1076960:three_prime_UTR
TATAAGCTTGATCAAGAATG+GGG 0.627945 7_2:-75504887 Msa1076960:intron
CAAAGGTTGTGAGAGGCAGG+TGG 0.633368 7_2:+75495494 None:intergenic
AAGCAATTAGTAGAGTATGA+CGG 0.642680 7_2:-75494849 Msa1076960:three_prime_UTR
GATGATATAATACATTACAA+GGG 0.643392 7_2:-75495011 Msa1076960:three_prime_UTR
TCAATTCTACAACTCTGCAA+CGG 0.644892 7_2:+75494329 None:intergenic
GTATGACGGAGGTCTATATG+TGG 0.662076 7_2:-75494835 Msa1076960:three_prime_UTR
TAATACGAGAATCCGAGCCG+AGG 0.671509 7_2:-75495309 Msa1076960:three_prime_UTR
GTTGAAGGGTTGTGATCATG+TGG 0.682135 7_2:+75495413 None:intergenic
GGATGGAACAAAGTTGGACA+AGG 0.682403 7_2:+75504680 None:intergenic
TGGAATGCAAAGGTTGTGAG+AGG 0.687706 7_2:+75495487 None:intergenic
AGAGTGTGCTATGAATGCGA+TGG 0.712794 7_2:-75495657 Msa1076960:three_prime_UTR
CAATTAGTAGAGTATGACGG+AGG 0.746558 7_2:-75494846 Msa1076960:three_prime_UTR
CATGTGGTGATGGTTCAATG+CGG 0.842243 7_2:+75495429 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATATTAATTTATTAA+AGG - chr7_2:75496059-75496078 Msa1076960:intron 0.0%
!! ATATTTAAAAAAATATATAA+CGG - chr7_2:75500562-75500581 Msa1076960:intron 0.0%
!! AAAAATAAATAAATAAATAA+AGG - chr7_2:75501184-75501203 Msa1076960:intron 0.0%
!! AGTACTTTATATAATAAAAT+TGG + chr7_2:75495134-75495153 None:intergenic 10.0%
!!! TTTATTTTTATTGTCTTTTT+TGG - chr7_2:75496789-75496808 Msa1076960:intron 10.0%
!! AGTACATATTTAATTATTAA+GGG + chr7_2:75497135-75497154 None:intergenic 10.0%
!! TAGTACATATTTAATTATTA+AGG + chr7_2:75497136-75497155 None:intergenic 10.0%
!!! ATGAATTTATTTTTCTTAAA+TGG + chr7_2:75497218-75497237 None:intergenic 10.0%
!! CTTTATAATTTAAATATCAA+TGG - chr7_2:75497240-75497259 Msa1076960:intron 10.0%
!!! TTGTTTCATATTTTATAATA+GGG - chr7_2:75497373-75497392 Msa1076960:intron 10.0%
!!! TAAATAAATAAAAAAGTACT+GGG + chr7_2:75497481-75497500 None:intergenic 10.0%
!!! TTAAATAAATAAAAAAGTAC+TGG + chr7_2:75497482-75497501 None:intergenic 10.0%
!!! CTCTTTTATTAATTATATTA+AGG - chr7_2:75497736-75497755 Msa1076960:intron 10.0%
!! TAATAAAAAAATGAGAAAAA+AGG - chr7_2:75499406-75499425 Msa1076960:intron 10.0%
!!! CTATAAAAAAAATCAATTTT+AGG + chr7_2:75499577-75499596 None:intergenic 10.0%
!!! AAAAAGTTCAATTTTAATAA+AGG - chr7_2:75500153-75500172 Msa1076960:intron 10.0%
!!! ATAGATTTAATCTTATTTTT+TGG - chr7_2:75500307-75500326 Msa1076960:intron 10.0%
!! TTCATTTAATAATAAAGTTT+GGG + chr7_2:75500473-75500492 None:intergenic 10.0%
!! TTTCATTTAATAATAAAGTT+TGG + chr7_2:75500474-75500493 None:intergenic 10.0%
!! ATCCTTAAAAAAAAATATTA+TGG - chr7_2:75500799-75500818 Msa1076960:intron 10.0%
!!! AACCATAATATTTTTTTTTA+AGG + chr7_2:75500804-75500823 None:intergenic 10.0%
!! TTAATTAATTACTTGTAAAT+AGG - chr7_2:75501213-75501232 Msa1076960:intron 10.0%
!! TAATTAATTACTTGTAAATA+GGG - chr7_2:75501214-75501233 Msa1076960:intron 10.0%
!! TATAAAGTATATAAAATATC+GGG - chr7_2:75501312-75501331 Msa1076960:intron 10.0%
!!! AGATTTACTTTTTTTTTTTA+AGG - chr7_2:75501884-75501903 Msa1076960:intron 10.0%
!!! AATTAAATTTTCTTTAAAAC+TGG + chr7_2:75502240-75502259 None:intergenic 10.0%
!!! AGAAAATTTAATTAATTTGA+TGG - chr7_2:75502247-75502266 Msa1076960:intron 10.0%
!! AAAATGTCATTAATTTAAAA+TGG - chr7_2:75502280-75502299 Msa1076960:intron 10.0%
!!! AAATGTCATTAATTTAAAAT+GGG - chr7_2:75502281-75502300 Msa1076960:intron 10.0%
!!! AATTAAAAGTATAATAAAAC+GGG + chr7_2:75503357-75503376 None:intergenic 10.0%
!! ATTTATATATTAATGATGAA+AGG - chr7_2:75504365-75504384 Msa1076960:intron 10.0%
!! TAATATAAAAATTTACATTC+AGG - chr7_2:75504744-75504763 Msa1076960:CDS 10.0%
!! AAAAGTTAATCTTAATCATA+AGG - chr7_2:75496972-75496991 Msa1076960:intron 15.0%
!!! GTGTAGATTTTATTTTTAAA+GGG + chr7_2:75497076-75497095 None:intergenic 15.0%
!!! AGTGTAGATTTTATTTTTAA+AGG + chr7_2:75497077-75497096 None:intergenic 15.0%
!!! AATTTATTTTTCTTAAATGG+TGG + chr7_2:75497215-75497234 None:intergenic 15.0%
!! TTACTAAATACAGTAAAATA+TGG + chr7_2:75497331-75497350 None:intergenic 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG - chr7_2:75497372-75497391 Msa1076960:intron 15.0%
!!! AAATAAATAAAAAAGTACTG+GGG + chr7_2:75497480-75497499 None:intergenic 15.0%
!! GTTACAAAAAAATTAGATAA+AGG + chr7_2:75498627-75498646 None:intergenic 15.0%
!!! CTAATTTTTTTGTAACAATT+TGG - chr7_2:75498631-75498650 Msa1076960:intron 15.0%
!! TAACATTAATTCATGATATT+TGG - chr7_2:75499231-75499250 Msa1076960:intron 15.0%
!! GTTACAAATAAATAAGATAA+AGG - chr7_2:75499496-75499515 Msa1076960:intron 15.0%
!! AATCAAAATGTAATATACAT+TGG + chr7_2:75499635-75499654 None:intergenic 15.0%
!!! AATGTATATTACATTTTGAT+TGG - chr7_2:75499634-75499653 Msa1076960:intron 15.0%
!!! TTTTACATTTGTTGTAATTT+TGG + chr7_2:75500098-75500117 None:intergenic 15.0%
!! ATTAAATCTATATGTGAAAT+TGG + chr7_2:75500298-75500317 None:intergenic 15.0%
!!! ATATTTTTTTGTCCAAAAAA+AGG - chr7_2:75500707-75500726 Msa1076960:intron 15.0%
!!! TATTTTTTTGTCCAAAAAAA+GGG - chr7_2:75500708-75500727 Msa1076960:intron 15.0%
!!! GTGTAAATATACTATTTTTA+TGG - chr7_2:75500771-75500790 Msa1076960:intron 15.0%
!!! TTGATAACTAATGAAATTAT+TGG + chr7_2:75500952-75500971 None:intergenic 15.0%
!!! ATAGTTAAAAGAAAGTATTA+AGG + chr7_2:75500992-75501011 None:intergenic 15.0%
!!! TTTTTTTGAACAAATCAAAA+TGG + chr7_2:75501521-75501540 None:intergenic 15.0%
!! ATAATTAAATAAAATCCTCA+AGG - chr7_2:75501584-75501603 Msa1076960:intron 15.0%
!!! TTACTTTTTTTTTTTAAGGA+TGG - chr7_2:75501888-75501907 Msa1076960:intron 15.0%
!!! AATGTCATTAATTTAAAATG+GGG - chr7_2:75502282-75502301 Msa1076960:intron 15.0%
!! AATAAATATGATTGTTATAG+TGG - chr7_2:75502353-75502372 Msa1076960:intron 15.0%
!!! TATGTTTTTTATGAATAAAC+AGG + chr7_2:75503166-75503185 None:intergenic 15.0%
!! TGTAAATTTCAAATATACTA+TGG - chr7_2:75503223-75503242 Msa1076960:intron 15.0%
!! AAGATTTGTATTTAAATTCA+TGG - chr7_2:75504813-75504832 Msa1076960:CDS 15.0%
!!! TATGATTTTGTTTCAATATT+AGG - chr7_2:75504983-75505002 Msa1076960:CDS 15.0%
!! TCATACCAATTATTAAAAAG+CGG + chr7_2:75494760-75494779 None:intergenic 20.0%
!! TTTCACAAAATCTTATTCAA+AGG + chr7_2:75494789-75494808 None:intergenic 20.0%
!! ACATTATTATTCAAACATTG+TGG - chr7_2:75495038-75495057 Msa1076960:three_prime_UTR 20.0%
!! TTTGGATGAAAAATTATTAG+AGG + chr7_2:75495266-75495285 None:intergenic 20.0%
!! CTTATTTGGAAATTTATTCA+AGG - chr7_2:75495709-75495728 Msa1076960:three_prime_UTR 20.0%
!! ATTGATATCTAAGAGAAATT+TGG - chr7_2:75495956-75495975 Msa1076960:intron 20.0%
!! AAGATTGTATTATAATGTGT+TGG + chr7_2:75496086-75496105 None:intergenic 20.0%
!! ATATAAATATGCATCTTAGA+AGG + chr7_2:75496278-75496297 None:intergenic 20.0%
!!! TAAAGAATCTTTTGTACTAT+TGG - chr7_2:75496503-75496522 Msa1076960:intron 20.0%
!! GTTGTATTCTATAAATCTTA+AGG - chr7_2:75496587-75496606 Msa1076960:intron 20.0%
!! TTTGATCAAACAAAGAAATT+TGG + chr7_2:75496677-75496696 None:intergenic 20.0%
!!! ATTTTTATTGTCTTTTTTGG+AGG - chr7_2:75496792-75496811 Msa1076960:intron 20.0%
!!! TTTTTATTGTCTTTTTTGGA+GGG - chr7_2:75496793-75496812 Msa1076960:intron 20.0%
!!! TATGCATATTACATTTTGAT+TGG + chr7_2:75496905-75496924 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+TGG + chr7_2:75497666-75497685 None:intergenic 20.0%
!!! AGATTTTATTTTTAAAGGGA+GGG + chr7_2:75497072-75497091 None:intergenic 20.0%
!!! TAGATTTTATTTTTAAAGGG+AGG + chr7_2:75497073-75497092 None:intergenic 20.0%
!! TATTTAATTATTAAGGGAGA+TGG + chr7_2:75497129-75497148 None:intergenic 20.0%
!!! AATAAATAAAAAAGTACTGG+GGG + chr7_2:75497479-75497498 None:intergenic 20.0%
!!! GAAATGTTTTCTAATATGTT+TGG - chr7_2:75497625-75497644 Msa1076960:intron 20.0%
!!! TTTCTAATATGTTTGGAATA+AGG - chr7_2:75497632-75497651 Msa1076960:intron 20.0%
!!! TTCTAATATGTTTGGAATAA+GGG - chr7_2:75497633-75497652 Msa1076960:intron 20.0%
!!! AGTGTATATTTTAACATAAG+AGG - chr7_2:75497664-75497683 Msa1076960:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr7_2:75497665-75497684 Msa1076960:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr7_2:75497666-75497685 Msa1076960:intron 20.0%
!! TAAAGAAGAAATTTGAATGA+AGG + chr7_2:75497912-75497931 None:intergenic 20.0%
!! CAAAATTGAACAATCAAAAT+GGG + chr7_2:75498447-75498466 None:intergenic 20.0%
!! ACAAAATTGAACAATCAAAA+TGG + chr7_2:75498446-75498465 None:intergenic 20.0%
!!! CTTTTTGATTTGATTTTTCT+TGG + chr7_2:75498310-75498329 None:intergenic 20.0%
!! ACAAAATTGAACAATCAAAA+TGG - chr7_2:75498446-75498465 Msa1076960:intron 20.0%
!! CAAAATTGAACAATCAAAAT+GGG - chr7_2:75498447-75498466 Msa1076960:intron 20.0%
!! TGAACACCTAAATATAATTA+AGG - chr7_2:75498583-75498602 Msa1076960:intron 20.0%
!! ATCTTGCCTTAATTATATTT+AGG + chr7_2:75498592-75498611 None:intergenic 20.0%
!! TAACATTAATTCACGATATT+TGG + chr7_2:75498889-75498908 None:intergenic 20.0%
!!! ATCTTTATTTTTTTCCGTTT+AGG + chr7_2:75499463-75499482 None:intergenic 20.0%
!! ACGGAAAAAAATAAAGATAA+AGG - chr7_2:75499465-75499484 Msa1076960:intron 20.0%
!! CTTATTTATTTGTAACACTT+TGG + chr7_2:75499492-75499511 None:intergenic 20.0%
!! TATAGACAAGATTACATTAT+AGG + chr7_2:75499523-75499542 None:intergenic 20.0%
!! TAGAAAAAACCAACTAATTA+TGG - chr7_2:75499704-75499723 Msa1076960:intron 20.0%
!!! ATTGTTAGAATTGATTAGTT+AGG - chr7_2:75499735-75499754 Msa1076960:intron 20.0%
!!! TTAGAAGTTGGTTATATAAT+TGG - chr7_2:75499793-75499812 Msa1076960:intron 20.0%
!! ATCCTATTTATAAGACTTAA+TGG + chr7_2:75499824-75499843 None:intergenic 20.0%
!! TCGAATATTACATTATCAAA+AGG - chr7_2:75500040-75500059 Msa1076960:intron 20.0%
!! AAGAGATGCAAAATATAATT+AGG - chr7_2:75500206-75500225 Msa1076960:intron 20.0%
!! AATTCAATGTGAATATAAGA+TGG + chr7_2:75500669-75500688 None:intergenic 20.0%
!!! TATTTTTTTCTCCCTTTTTT+TGG + chr7_2:75500722-75500741 None:intergenic 20.0%
!!! CAACTATATTTTGAACAAAT+CGG + chr7_2:75500752-75500771 None:intergenic 20.0%
!! GTTTACAAATCAAATTGAAA+AGG - chr7_2:75500821-75500840 Msa1076960:intron 20.0%
!! CTTCAAAAATTAAATTAGTG+TGG + chr7_2:75500852-75500871 None:intergenic 20.0%
!! AAGTATTAAGGAAATAATAG+TGG + chr7_2:75500980-75500999 None:intergenic 20.0%
!!! CTATATCATATTTTTGTTAG+TGG + chr7_2:75501081-75501100 None:intergenic 20.0%
!! TATGCTTTGATTCATAAATT+CGG + chr7_2:75501154-75501173 None:intergenic 20.0%
!!! ATTTTTTTTTTTACTGAAGC+TGG - chr7_2:75501945-75501964 Msa1076960:intron 20.0%
!!! TTTTTTTTTTTACTGAAGCT+GGG - chr7_2:75501946-75501965 Msa1076960:intron 20.0%
!! TGAACACTACAAAATTTAAA+AGG + chr7_2:75502612-75502631 None:intergenic 20.0%
!! TTACTACTTGATTATGAAAA+AGG - chr7_2:75502669-75502688 Msa1076960:intron 20.0%
!! ATCAAAACAATGAAAAATCA+AGG + chr7_2:75503059-75503078 None:intergenic 20.0%
!! TCGAAAATTAAAATAAGATG+TGG + chr7_2:75503199-75503218 None:intergenic 20.0%
!!! GTATTATTTTATCCTTTGAA+AGG - chr7_2:75503275-75503294 Msa1076960:intron 20.0%
!! ACGAAAATATGTATACATAA+AGG - chr7_2:75503324-75503343 Msa1076960:intron 20.0%
!!! TGAATTTTCTTTATATAGAG+AGG - chr7_2:75503390-75503409 Msa1076960:intron 20.0%
!!! AGTAGAAAATAATTTTGATG+TGG + chr7_2:75503710-75503729 Msa1076970:CDS 20.0%
!! AAAGGAAAATATCATGTTAA+AGG - chr7_2:75504114-75504133 Msa1076960:intron 20.0%
!! TGATGATATAATACATTACA+AGG - chr7_2:75504162-75504181 Msa1076960:intron 20.0%
!! GATGATATAATACATTACAA+GGG - chr7_2:75504163-75504182 Msa1076960:intron 20.0%
!! ATAAAAATTTACATTCAGGA+AGG - chr7_2:75504748-75504767 Msa1076960:CDS 20.0%
!!! GAATCCTACTTTTTAATTAT+TGG - chr7_2:75504941-75504960 Msa1076960:CDS 20.0%
!! CATACCAATAATTAAAAAGT+AGG + chr7_2:75504948-75504967 None:intergenic 20.0%
!!! AATAATTTTGAAACTGAACT+TGG - chr7_2:75505031-75505050 Msa1076960:CDS 20.0%
!!! TTATCTTTGTGTTCATTTTT+AGG - chr7_2:75505066-75505085 Msa1076960:CDS 20.0%
!!! TTACCACAACATAAGTTTTT+TGG + chr7_2:75494122-75494141 None:intergenic 25.0%
! TAAAAAGAGTAATATCTGGA+AGG - chr7_2:75494139-75494158 Msa1076960:three_prime_UTR 25.0%
!!! GTAGTTGATTTGTATATTGA+CGG - chr7_2:75494212-75494231 Msa1076960:three_prime_UTR 25.0%
! TTTATAAGCTTGATCAAGAA+TGG - chr7_2:75494285-75494304 Msa1076960:three_prime_UTR 25.0%
! TTATAAGCTTGATCAAGAAT+GGG - chr7_2:75494286-75494305 Msa1076960:three_prime_UTR 25.0%
! ATGGTTAGATGTAAAAGATT+TGG - chr7_2:75494313-75494332 Msa1076960:three_prime_UTR 25.0%
! TGGTTAGATGTAAAAGATTT+GGG - chr7_2:75494314-75494333 Msa1076960:three_prime_UTR 25.0%
! CATACCAATTATTAAAAAGC+GGG + chr7_2:75494759-75494778 None:intergenic 25.0%
! TCGACATTAAGTACTAATTT+AGG - chr7_2:75495157-75495176 Msa1076960:three_prime_UTR 25.0%
! AAAATTATTAGAGGAACTCT+TGG + chr7_2:75495257-75495276 None:intergenic 25.0%
! AGTTATAGAGTTTGAGTATT+TGG + chr7_2:75495284-75495303 None:intergenic 25.0%
! TAACATTCTTGTACATACAA+TGG + chr7_2:75495644-75495663 None:intergenic 25.0%
!! TTTTTGTAGCACAGTATAAA+AGG + chr7_2:75495684-75495703 None:intergenic 25.0%
! CTACAAAAAATGCACTTATT+TGG - chr7_2:75495695-75495714 Msa1076960:three_prime_UTR 25.0%
! GAAATTTATTCAAGGTTCAA+TGG - chr7_2:75495717-75495736 Msa1076960:exon 25.0%
! TATTACCAATCTCAATCATT+TGG + chr7_2:75495757-75495776 None:intergenic 25.0%
! TCCAAACAAAAATTAATCCT+TGG + chr7_2:75495824-75495843 None:intergenic 25.0%
! GTTAGAAATATATAGCAACT+AGG + chr7_2:75495872-75495891 None:intergenic 25.0%
! ATTATATGAAATTCATCACG+TGG - chr7_2:75496106-75496125 Msa1076960:intron 25.0%
! AATAGTATCTTCAGATAGAA+AGG - chr7_2:75496131-75496150 Msa1076960:intron 25.0%
! ATAGTATCTTCAGATAGAAA+GGG - chr7_2:75496132-75496151 Msa1076960:intron 25.0%
! TTAGATACTGAAATAGAACT+TGG - chr7_2:75496204-75496223 Msa1076960:intron 25.0%
! TCAAAAGGAACATAAGTATT+CGG + chr7_2:75496381-75496400 None:intergenic 25.0%
!!! AAGGAAAATGTTTTTGCTAT+TGG - chr7_2:75496442-75496461 Msa1076960:intron 25.0%
!!! AAATGTTTTTGCTATTGGAA+TGG - chr7_2:75496447-75496466 Msa1076960:intron 25.0%
! GATTAATTGAAAGACACTAT+AGG - chr7_2:75496612-75496631 Msa1076960:intron 25.0%
! ATGAAAATCACAAAATCTCA+AGG + chr7_2:75496712-75496731 None:intergenic 25.0%
!!! TATTTTAACATAAGAGTGGA+GGG + chr7_2:75497042-75497061 None:intergenic 25.0%
!!! ATATTTTAACATAAGAGTGG+AGG + chr7_2:75497043-75497062 None:intergenic 25.0%
! TGTAATTCAAGCATCTTATA+GGG + chr7_2:75497105-75497124 None:intergenic 25.0%
! TTGTAATTCAAGCATCTTAT+AGG + chr7_2:75497106-75497125 None:intergenic 25.0%
!! TCTAATATGTTTGGAATAAG+GGG - chr7_2:75497634-75497653 Msa1076960:intron 25.0%
! TGTAATTCAAGAATCTTTGA+GGG - chr7_2:75497696-75497715 Msa1076960:intron 25.0%
! TACATCAAATTTCTTTCATC+TGG - chr7_2:75497810-75497829 Msa1076960:intron 25.0%
! GAATGTAAGTGATGAATTTA+AGG + chr7_2:75497840-75497859 None:intergenic 25.0%
! GAAACAAGAATTGATCAATA+GGG + chr7_2:75497940-75497959 None:intergenic 25.0%
! AGAAACAAGAATTGATCAAT+AGG + chr7_2:75497941-75497960 None:intergenic 25.0%
! AAGTCATCTGTTATACTTTA+AGG + chr7_2:75498257-75498276 None:intergenic 25.0%
! GAATGTAACCGATAAATTTA+AGG - chr7_2:75498485-75498504 Msa1076960:intron 25.0%
! CTGAATGTCCTTAAATTTAT+CGG + chr7_2:75498496-75498515 None:intergenic 25.0%
! ATTAATTTACACTACAACAC+TGG + chr7_2:75498557-75498576 None:intergenic 25.0%
!!! TATCTTTATTTTTCCCGTTT+AGG - chr7_2:75498659-75498678 Msa1076960:intron 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG + chr7_2:75499202-75499221 None:intergenic 25.0%
! TTGCAACATTTGTGAAATTA+AGG + chr7_2:75498951-75498970 None:intergenic 25.0%
! TTAATTTCACAAATGTTGCA+AGG - chr7_2:75498950-75498969 Msa1076960:intron 25.0%
! TACAAAAGTTAAGATTGTTC+TGG - chr7_2:75499014-75499033 Msa1076960:intron 25.0%
!! AAACTAAATCCCTTTTCTAT+AGG - chr7_2:75499168-75499187 Msa1076960:intron 25.0%
!! AACTAAATCCCTTTTCTATA+GGG - chr7_2:75499169-75499188 Msa1076960:intron 25.0%
! AATCAAAACCCTATAGAAAA+GGG + chr7_2:75499180-75499199 None:intergenic 25.0%
! AAATCAAAACCCTATAGAAA+AGG + chr7_2:75499181-75499200 None:intergenic 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG - chr7_2:75499202-75499221 Msa1076960:intron 25.0%
! AAAAACCAACTAATTATGGT+TGG - chr7_2:75499708-75499727 Msa1076960:intron 25.0%
! AACTTCTAACTTTACTAACT+AGG + chr7_2:75499782-75499801 None:intergenic 25.0%
! TAGTTAGTAAAGTTAGAAGT+TGG - chr7_2:75499781-75499800 Msa1076960:intron 25.0%
!! GTCCATTAAGTCTTATAAAT+AGG - chr7_2:75499819-75499838 Msa1076960:intron 25.0%
! TTATAGTCAACTGTAAATGT+TGG - chr7_2:75500009-75500028 Msa1076960:intron 25.0%
!! AATTGACGAAAACAAGTTTT+AGG + chr7_2:75500499-75500518 None:intergenic 25.0%
! AATCAAGAAAATGATTACGA+AGG - chr7_2:75501284-75501303 Msa1076960:intron 25.0%
! GTTATTCAATGACAATTATG+AGG + chr7_2:75501684-75501703 None:intergenic 25.0%
! TTATTTCACAACAAATGCAT+TGG - chr7_2:75502025-75502044 Msa1076960:intron 25.0%
!! AATGATTTTTGCAATGTGTT+TGG - chr7_2:75502172-75502191 Msa1076960:intron 25.0%
! TAAAAGATTAATAATCGGTG+AGG + chr7_2:75502444-75502463 None:intergenic 25.0%
! ACGCGTAAAAGATTAATAAT+CGG + chr7_2:75502449-75502468 None:intergenic 25.0%
! AAAAACGATTGAGATGAAAA+AGG + chr7_2:75502585-75502604 None:intergenic 25.0%
! AACTGATAAAATAGTCGAAT+AGG - chr7_2:75503299-75503318 Msa1076960:intron 25.0%
! AAATCTTCTTGAAGATTTGT+GGG - chr7_2:75503571-75503590 Msa1076960:intron 25.0%
!! CATCAAATCCAAAACTTTTT+CGG + chr7_2:75503897-75503916 Msa1076970:CDS 25.0%
! AGTCATCATGAAGATAAAAT+TGG - chr7_2:75503956-75503975 Msa1076960:intron 25.0%
!! ATTTTCCTTTTCTCCAATAT+TGG + chr7_2:75504104-75504123 None:intergenic 25.0%
! ACTTTATGTTGTGGATAAAA+TGG - chr7_2:75504189-75504208 Msa1076960:intron 25.0%
! CTTTATGTTGTGGATAAAAT+GGG - chr7_2:75504190-75504209 Msa1076960:intron 25.0%
!! ATAAAATGGGAACAATTTTC+TGG - chr7_2:75504203-75504222 Msa1076960:intron 25.0%
! TGCTGAAAATAGGAATATAA+GGG - chr7_2:75504282-75504301 Msa1076960:intron 25.0%
!!! ATGATGAAAGGTATTACAAA+AGG - chr7_2:75504377-75504396 Msa1076960:intron 25.0%
!!! TGATGAAAGGTATTACAAAA+GGG - chr7_2:75504378-75504397 Msa1076960:intron 25.0%
! TTTATAAGCTTGATCAAGAA+TGG - chr7_2:75494285-75494304 Msa1076960:three_prime_UTR 25.0%
! TTATAAGCTTGATCAAGAAT+GGG - chr7_2:75494286-75494305 Msa1076960:three_prime_UTR 25.0%
! ATGGTTAGAAGTAAAAGATT+TGG - chr7_2:75504459-75504478 Msa1076960:intron 25.0%
! TGGTTAGAAGTAAAAGATTT+GGG - chr7_2:75504460-75504479 Msa1076960:intron 25.0%
! CTTACAAATTAATTGATCAC+TGG + chr7_2:75504664-75504683 None:intergenic 25.0%
! ATACAAATCTTCAATGAAGT+TGG + chr7_2:75504804-75504823 None:intergenic 25.0%
! AATTAAAAAGTAGGATTCCA+AGG + chr7_2:75504939-75504958 None:intergenic 25.0%
! TGAAACAAAATCATATCCAA+AGG + chr7_2:75504978-75504997 None:intergenic 25.0%
!!! GTGTTCATTTTTAGGAATAA+TGG - chr7_2:75505074-75505093 Msa1076960:CDS 25.0%
TCACCAAAAAACTTATGTTG+TGG - chr7_2:75494116-75494135 Msa1076960:three_prime_UTR 30.0%
GTGGTAAAAAGAGTAATATC+TGG - chr7_2:75494135-75494154 Msa1076960:three_prime_UTR 30.0%
AAACAATTAGTAGAGTCTGA+TGG - chr7_2:75494179-75494198 Msa1076960:three_prime_UTR 30.0%
ATTTGTATATTGACGGTGAA+AGG - chr7_2:75494219-75494238 Msa1076960:three_prime_UTR 30.0%
! GGTGAAAGGTTTTACAAATT+GGG - chr7_2:75494233-75494252 Msa1076960:three_prime_UTR 30.0%
TATAAGCTTGATCAAGAATG+GGG - chr7_2:75494287-75494306 Msa1076960:three_prime_UTR 30.0%
TTTCAACTTGGAGAATTTAG+AGG - chr7_2:75494448-75494467 Msa1076960:intron 30.0%
CCACAAGACAATAAAATCAA+TGG + chr7_2:75494567-75494586 None:intergenic 30.0%
!!! CCATTGATTTTATTGTCTTG+TGG - chr7_2:75494564-75494583 Msa1076960:three_prime_UTR 30.0%
TTCTTCCATACCTTATATGA+GGG + chr7_2:75494648-75494667 None:intergenic 30.0%
CGACTTATCATCAATAAGTT+TGG + chr7_2:75494674-75494693 None:intergenic 30.0%
!!! GAATCCCGCTTTTTAATAAT+TGG - chr7_2:75494752-75494771 Msa1076960:three_prime_UTR 30.0%
GTTCACTTATTGAGTTAATG+AGG - chr7_2:75494821-75494840 Msa1076960:three_prime_UTR 30.0%
AGGAACAATAAGAGTTAATG+AGG - chr7_2:75494841-75494860 Msa1076960:three_prime_UTR 30.0%
AAGACATGTTTGACATAACA+TGG + chr7_2:75494931-75494950 None:intergenic 30.0%
AAACATGTCTTGCTTTGTAT+GGG - chr7_2:75494940-75494959 Msa1076960:three_prime_UTR 30.0%
AAATTAAGTATAGAGGAGTG+AGG + chr7_2:75495576-75495595 None:intergenic 30.0%
CCAAAGCAAATTAAGTATAG+AGG + chr7_2:75495583-75495602 None:intergenic 30.0%
!! CCTCTATACTTAATTTGCTT+TGG - chr7_2:75495580-75495599 Msa1076960:three_prime_UTR 30.0%
AGAAAGAAAAAGGTAAGTGA+AGG + chr7_2:75495613-75495632 None:intergenic 30.0%
TTATTCAAGGTTCAATGGAT+TGG - chr7_2:75495722-75495741 Msa1076960:exon 30.0%
AACTACCAAATGATTGAGAT+TGG - chr7_2:75495749-75495768 Msa1076960:intron 30.0%
! GCCAAGGATTAATTTTTGTT+TGG - chr7_2:75495820-75495839 Msa1076960:intron 30.0%
! TTAAAATAGCATTAGCTCTC+TGG + chr7_2:75495928-75495947 None:intergenic 30.0%
TAGTATCTTCAGATAGAAAG+GGG - chr7_2:75496133-75496152 Msa1076960:intron 30.0%
!! TCTTTGCTATTGATGTCAAT+TGG - chr7_2:75496247-75496266 Msa1076960:intron 30.0%
!! TTCCTTTTGAGAATGATTTG+TGG - chr7_2:75496391-75496410 Msa1076960:intron 30.0%
TGCACAAACATGTAAAACTA+AGG - chr7_2:75496423-75496442 Msa1076960:intron 30.0%
!! CTATCTTTTTAACTGTAGTG+CGG + chr7_2:75496644-75496663 None:intergenic 30.0%
GTTAAAAAGATAGGCACATT+TGG - chr7_2:75496651-75496670 Msa1076960:intron 30.0%
! TCTTTGTTTGATCAAATCTC+TGG - chr7_2:75496681-75496700 Msa1076960:intron 30.0%
! TTGTGATTTTCATTTGTGCT+TGG - chr7_2:75496719-75496738 Msa1076960:intron 30.0%
TGGATATATTGTTGCTAAAG+TGG - chr7_2:75496752-75496771 Msa1076960:intron 30.0%
!! ATTTTAACATAAGAGTGGAG+GGG + chr7_2:75497041-75497060 None:intergenic 30.0%
TGTAATTCAAGCTTCTCTTA+AGG - chr7_2:75497594-75497613 Msa1076960:intron 30.0%
GTAATTCAAGCTTCTCTTAA+GGG - chr7_2:75497595-75497614 Msa1076960:intron 30.0%
! CTAATATGTTTGGAATAAGG+GGG - chr7_2:75497635-75497654 Msa1076960:intron 30.0%
! TAATATGTTTGGAATAAGGG+GGG - chr7_2:75497636-75497655 Msa1076960:intron 30.0%
GTGTAATTCAAGAATCTTTG+AGG - chr7_2:75497695-75497714 Msa1076960:intron 30.0%
GTAATTCAAGAATCTTTGAG+GGG - chr7_2:75497697-75497716 Msa1076960:intron 30.0%
CAATCAAAATGGGAAGATAA+CGG + chr7_2:75497967-75497986 None:intergenic 30.0%
! GTTAGCAGATTTTATTAGGT+TGG + chr7_2:75498094-75498113 None:intergenic 30.0%
!! GTTCTTTTGTTTGGACTTAA+AGG + chr7_2:75498144-75498163 None:intergenic 30.0%
! GAAGCTTTTGTTCTTTTGTT+TGG + chr7_2:75498153-75498172 None:intergenic 30.0%
!! TTTGATTTTTCTTGGTTGTG+AGG + chr7_2:75498302-75498321 None:intergenic 30.0%
ACAGTAATTCTCACGATATT+TGG - chr7_2:75498369-75498388 Msa1076960:intron 30.0%
CTCACGAAAATTGAAAAATG+CGG - chr7_2:75498414-75498433 Msa1076960:intron 30.0%
TTAAGGCAAGATTACATTAG+AGG - chr7_2:75498600-75498619 Msa1076960:intron 30.0%
!! TGTGCTTTTAAGAGAGATAA+AGG + chr7_2:75498686-75498705 None:intergenic 30.0%
GAACATCTTCATCATATTTC+TGG + chr7_2:75498794-75498813 None:intergenic 30.0%
AGAAGATGATGAAGATTCAA+AGG + chr7_2:75498834-75498853 None:intergenic 30.0%
!!! TTTTGGGGTTATTTTTATGC+CGG - chr7_2:75499071-75499090 Msa1076960:intron 30.0%
TCTAACTCAATATTCAAACC+CGG + chr7_2:75499093-75499112 None:intergenic 30.0%
GAAGATTCAAAGAAAGAAGA+TGG - chr7_2:75499296-75499315 Msa1076960:intron 30.0%
GTACATCTTCATCATATTTC+TGG - chr7_2:75499326-75499345 Msa1076960:intron 30.0%
TGAGAGATAAAAGACCTAAA+CGG - chr7_2:75499446-75499465 Msa1076960:intron 30.0%
! TTTGATTGGTTGATATCATG+AGG - chr7_2:75499648-75499667 Msa1076960:intron 30.0%
! TTGATTGGTTGATATCATGA+GGG - chr7_2:75499649-75499668 Msa1076960:intron 30.0%
TCTTACCAACCATAATTAGT+TGG + chr7_2:75499716-75499735 None:intergenic 30.0%
TATAGCAAGTCAAAGACATA+AGG - chr7_2:75501096-75501115 Msa1076960:intron 30.0%
ATAGATAATCTCCTACTTGT+TGG + chr7_2:75501122-75501141 None:intergenic 30.0%
!! GCATTTGTTGTGAAATAATC+TGG + chr7_2:75502023-75502042 None:intergenic 30.0%
ATCATTAACATATCACCCTA+GGG + chr7_2:75502103-75502122 None:intergenic 30.0%
TATCATTAACATATCACCCT+AGG + chr7_2:75502104-75502123 None:intergenic 30.0%
! AATGTGTTTGGTTCAATTCA+TGG - chr7_2:75502184-75502203 Msa1076960:intron 30.0%
!! ATGGCTATTTTCTATTGGTT+TGG - chr7_2:75502383-75502402 Msa1076960:intron 30.0%
!!! TGGCTATTTTCTATTGGTTT+GGG - chr7_2:75502384-75502403 Msa1076960:intron 30.0%
ATCAAATAAGTACCTGAAGA+AGG + chr7_2:75502561-75502580 None:intergenic 30.0%
!!! TGCTATCCACTTTTTAAGTT+AGG - chr7_2:75502736-75502755 Msa1076960:intron 30.0%
!!! GCTATCCACTTTTTAAGTTA+GGG - chr7_2:75502737-75502756 Msa1076960:intron 30.0%
AACAACCCTAACTTAAAAAG+TGG + chr7_2:75502745-75502764 None:intergenic 30.0%
AATACGACAAGGGATAATAA+GGG + chr7_2:75502778-75502797 None:intergenic 30.0%
AAATACGACAAGGGATAATA+AGG + chr7_2:75502779-75502798 None:intergenic 30.0%
TCTGAACATGTGTTTATAAG+TGG - chr7_2:75502898-75502917 Msa1076960:intron 30.0%
TTGCTTCTTGTTAGAAATCT+TGG + chr7_2:75502978-75502997 None:intergenic 30.0%
AGAATAAACTAAACCATGCT+TGG + chr7_2:75503034-75503053 None:intergenic 30.0%
! TTTTATCAGTTGCCTTTCAA+AGG + chr7_2:75503290-75503309 None:intergenic 30.0%
GATGGATATGAATAAGATAG+TGG - chr7_2:75503535-75503554 Msa1076960:intron 30.0%
CAAATCTTCTTGAAGATTTG+TGG - chr7_2:75503570-75503589 Msa1076960:intron 30.0%
!!! AATCGTAGTGTTCAGTTTTT+TGG + chr7_2:75503606-75503625 Msa1076970:CDS 30.0%
!! AATTTTGATGTGGAATGCAA+AGG + chr7_2:75503700-75503719 Msa1076970:CDS 30.0%
GATTAGAACAAGAAGTTGAA+GGG + chr7_2:75503778-75503797 Msa1076970:CDS 30.0%
TGATTAGAACAAGAAGTTGA+AGG + chr7_2:75503779-75503798 Msa1076970:CDS 30.0%
TCAACTTCTTGTTCTAATCA+AGG - chr7_2:75503779-75503798 Msa1076960:intron 30.0%
ATCAAAGAGATAAAGTTTGG+AGG + chr7_2:75503837-75503856 Msa1076970:CDS 30.0%
GAGATCAAAGAGATAAAGTT+TGG + chr7_2:75503840-75503859 Msa1076970:CDS 30.0%
!!! AACTTTTTCGGTATTTTCCT+CGG + chr7_2:75503885-75503904 Msa1076970:CDS 30.0%
! GGAAAATACCGAAAAAGTTT+TGG - chr7_2:75503886-75503905 Msa1076960:intron 30.0%
!!! AGTGATCTTGTTTTCTATTC+AGG - chr7_2:75504030-75504049 Msa1076960:intron 30.0%
!!! GTGATCTTGTTTTCTATTCA+GGG - chr7_2:75504031-75504050 Msa1076960:intron 30.0%
TGTTTCCAATATTGGAGAAA+AGG - chr7_2:75504096-75504115 Msa1076960:intron 30.0%
ATCATGTTAAAGGATGATTG+TGG - chr7_2:75504124-75504143 Msa1076960:intron 30.0%
TGAAAATTGAACCAACTTCA+AGG + chr7_2:75494099-75494118 None:intergenic 30.0%
! TATTCCTATTTTCAGCACAA+TGG + chr7_2:75504279-75504298 None:intergenic 30.0%
GTGCTGAAAATAGGAATATA+AGG - chr7_2:75504281-75504300 Msa1076960:intron 30.0%
AAGCAATTAGTAGAGTATGA+CGG - chr7_2:75504325-75504344 Msa1076960:intron 30.0%
!! GATGAAAGGTATTACAAAAG+GGG - chr7_2:75504379-75504398 Msa1076960:intron 30.0%
TATAAGCTTGATCAAGAATG+GGG - chr7_2:75494287-75494306 Msa1076960:three_prime_UTR 30.0%
! AGACACAAATTTTGCATTGT+TGG - chr7_2:75504507-75504526 Msa1076960:intron 30.0%
TCTACTTCTATTATGAAAGC+AGG - chr7_2:75504563-75504582 Msa1076960:intron 30.0%
CTACTTCTATTATGAAAGCA+GGG - chr7_2:75504564-75504583 Msa1076960:intron 30.0%
CAAATTAATTGATCACTGGA+TGG + chr7_2:75504660-75504679 None:intergenic 30.0%
AGAGTTGTAGAATTGAACTT+AGG - chr7_2:75504852-75504871 Msa1076960:CDS 30.0%
!! ATTGGTATGATTTGTTCCTT+TGG - chr7_2:75494770-75494789 Msa1076960:three_prime_UTR 30.0%
!! CAATGCTTTGTCTTTGAAGT+TGG - chr7_2:75494085-75494104 Msa1076960:three_prime_UTR 35.0%
! CGGTGAAAGGTTTTACAAAT+TGG - chr7_2:75494232-75494251 Msa1076960:three_prime_UTR 35.0%
CAAATTGGGTCACATATTGA+AGG - chr7_2:75494247-75494266 Msa1076960:three_prime_UTR 35.0%
CATATTGAAGGCTATTTGTG+TGG - chr7_2:75494259-75494278 Msa1076960:three_prime_UTR 35.0%
TTGATCAAGAATGGGGTAAA+TGG - chr7_2:75494294-75494313 Msa1076960:three_prime_UTR 35.0%
!! GGTGATGTTTCGTTTGTTTT+GGG - chr7_2:75494335-75494354 Msa1076960:three_prime_UTR 35.0%
AGACTCAAACATTGCATTGT+TGG - chr7_2:75494361-75494380 Msa1076960:three_prime_UTR 35.0%
!! TTGTTGGCTCAAGATTACTA+CGG - chr7_2:75494377-75494396 Msa1076960:three_prime_UTR 35.0%
TCTACTTCTATTGTGAAGAC+AGG - chr7_2:75494417-75494436 Msa1076960:intron 35.0%
!!! CTAAGCCAGCTAACATTTTT+TGG - chr7_2:75494471-75494490 Msa1076960:intron 35.0%
CTTACAAATTAACTCGTGAC+AGG + chr7_2:75494518-75494537 None:intergenic 35.0%
GTTCTTCCATACCTTATATG+AGG + chr7_2:75494649-75494668 None:intergenic 35.0%
TGTCTTATAGCTTGATGCAT+AGG - chr7_2:75494895-75494914 Msa1076960:three_prime_UTR 35.0%
CAAACATGTCTTGCTTTGTA+TGG - chr7_2:75494939-75494958 Msa1076960:three_prime_UTR 35.0%
AAGTAGGAGTTACTTGACTT+GGG + chr7_2:75495202-75495221 None:intergenic 35.0%
AGAATACCATCAATCACAAC+TGG + chr7_2:75495228-75495247 None:intergenic 35.0%
! TTGTGATTGATGGTATTCTC+TGG - chr7_2:75495229-75495248 Msa1076960:three_prime_UTR 35.0%
TCAAAGGTTAAATCGAAGCT+TGG + chr7_2:75495313-75495332 None:intergenic 35.0%
CTCATCATCATCATCTTCAA+AGG + chr7_2:75495329-75495348 None:intergenic 35.0%
! CTTTGAAGATGATGATGATG+AGG - chr7_2:75495327-75495346 Msa1076960:three_prime_UTR 35.0%
! TGATGATGATGAGGTTGAAT+TGG - chr7_2:75495336-75495355 Msa1076960:three_prime_UTR 35.0%
GTTGAATTGGATGAAGAAGA+GGG - chr7_2:75495349-75495368 Msa1076960:three_prime_UTR 35.0%
! AGAACATTTTCCAAGCAATG+TGG + chr7_2:75495392-75495411 None:intergenic 35.0%
TTGCTTGGAAAATGTTCTTG+AGG - chr7_2:75495394-75495413 Msa1076960:three_prime_UTR 35.0%
GGAAGATGACAGAAAGAAAA+AGG + chr7_2:75495623-75495642 None:intergenic 35.0%
TCCGTTTAGTCAAGTACTAA+CGG - chr7_2:75496032-75496051 Msa1076960:intron 35.0%
ACCGTTAGTACTTGACTAAA+CGG + chr7_2:75496036-75496055 None:intergenic 35.0%
GATACTGAAATAGAACTTGG+TGG - chr7_2:75496207-75496226 Msa1076960:intron 35.0%
AACATAAGTATTCGGCACAA+GGG + chr7_2:75496373-75496392 None:intergenic 35.0%
CTCCACAAATCATTCTCAAA+AGG + chr7_2:75496396-75496415 None:intergenic 35.0%
TCATACTCAACAAAACATGC+AGG + chr7_2:75496530-75496549 None:intergenic 35.0%
!! TGTTTTGTTGAGTATGAGTC+AGG - chr7_2:75496533-75496552 Msa1076960:intron 35.0%
CGCACTACAGTTAAAAAGAT+AGG - chr7_2:75496642-75496661 Msa1076960:intron 35.0%
!!! GTCTTTTTTGGAGGGAAATT+CGG - chr7_2:75496801-75496820 Msa1076960:intron 35.0%
GTAGTTCTCACCTAATTAGT+TGG + chr7_2:75496835-75496854 None:intergenic 35.0%
ATTACCCCTTAAACAAGAGA+GGG + chr7_2:75496862-75496881 None:intergenic 35.0%
AATTACCCCTTAAACAAGAG+AGG + chr7_2:75496863-75496882 None:intergenic 35.0%
! GATTGGTTGATATCATGAGA+GGG + chr7_2:75496888-75496907 None:intergenic 35.0%
! TGATTGGTTGATATCATGAG+AGG + chr7_2:75499650-75499669 None:intergenic 35.0%
!! ATGTTTTTGTTCTCACGTTC+GGG + chr7_2:75497887-75497906 None:intergenic 35.0%
!! GATGTTTTTGTTCTCACGTT+CGG + chr7_2:75497888-75497907 None:intergenic 35.0%
! GCGTGTTAGCAGATTTTATT+AGG + chr7_2:75498098-75498117 None:intergenic 35.0%
TTGTTTGGACTTAAAGGCTT+TGG + chr7_2:75498138-75498157 None:intergenic 35.0%
!!! GAGTTTGCTAGCATCTTTTT+CGG + chr7_2:75498200-75498219 None:intergenic 35.0%
! ATACTTTAAGGATTGCTAGC+AGG + chr7_2:75498245-75498264 None:intergenic 35.0%
AGAGAGATAAAGGACCTAAA+CGG + chr7_2:75498676-75498695 None:intergenic 35.0%
ATTTCACAAATGTTGCAAGG+AGG - chr7_2:75498953-75498972 Msa1076960:intron 35.0%
!!! TTTGGGGTTATTTTTATGCC+GGG - chr7_2:75499072-75499091 Msa1076960:intron 35.0%
! TGATTGGTTGATATCATGAG+GGG - chr7_2:75499650-75499669 Msa1076960:intron 35.0%
AAATACCCTCTAAACAAGAG+AGG - chr7_2:75499675-75499694 Msa1076960:intron 35.0%
AATACCCTCTAAACAAGAGA+GGG - chr7_2:75499676-75499695 Msa1076960:intron 35.0%
! ATTACCCTCTCTTGTTTAGA+GGG + chr7_2:75499683-75499702 None:intergenic 35.0%
TGCACTCTTACTGATGTTTA+TGG - chr7_2:75499939-75499958 Msa1076960:intron 35.0%
AGACAGTTGTGAAGAATCAT+AGG + chr7_2:75499982-75500001 None:intergenic 35.0%
GTCAACTGTAAATGTTGGAA+TGG - chr7_2:75500014-75500033 Msa1076960:intron 35.0%
AATAAAGTTTGGGTGCATGT+TGG + chr7_2:75500463-75500482 None:intergenic 35.0%
!!! TAATTTTTGAAGCCTGCACA+CGG - chr7_2:75500860-75500879 Msa1076960:intron 35.0%
CTATAACAGTCCATCAACTT+TGG - chr7_2:75501008-75501027 Msa1076960:intron 35.0%
TTAGATTGCTCCAAAGTTGA+TGG + chr7_2:75501021-75501040 None:intergenic 35.0%
ACTTTCTCATCTTGATTGTG+CGG - chr7_2:75501465-75501484 Msa1076960:intron 35.0%
!!! TATTTGTTTTGTGCTCCTTG+AGG + chr7_2:75501602-75501621 None:intergenic 35.0%
ATCTGATCCAAACGAAATGT+CGG - chr7_2:75501716-75501735 Msa1076960:intron 35.0%
TTTAGATCCGACATTTCGTT+TGG + chr7_2:75501726-75501745 None:intergenic 35.0%
!! TTGTTATAGTGGATGACACA+TGG - chr7_2:75502364-75502383 Msa1076960:intron 35.0%
!! GACACATGGCTATTTTCTAT+TGG - chr7_2:75502378-75502397 Msa1076960:intron 35.0%
! AATTGCCCATGAGTTTTCAA+AGG - chr7_2:75502409-75502428 Msa1076960:intron 35.0%
TGTTTCCAGGAAAAGGAAAA+GGG + chr7_2:75502476-75502495 None:intergenic 35.0%
TTGTTTCCAGGAAAAGGAAA+AGG + chr7_2:75502477-75502496 None:intergenic 35.0%
!! CCAATTTTGTTTCCAGGAAA+AGG + chr7_2:75502483-75502502 None:intergenic 35.0%
! CCTTTTCCTGGAAACAAAAT+TGG - chr7_2:75502480-75502499 Msa1076960:intron 35.0%
CTAAGGCTAAAATACGACAA+GGG + chr7_2:75502788-75502807 None:intergenic 35.0%
GGTTGTATTGTAAGGTTCAT+TGG - chr7_2:75502824-75502843 Msa1076960:intron 35.0%
AGAGTTAAATAGTCCCACAT+CGG - chr7_2:75502864-75502883 Msa1076960:intron 35.0%
! GACCATATTTTATCCGATGT+GGG + chr7_2:75502880-75502899 None:intergenic 35.0%
! AGACCATATTTTATCCGATG+TGG + chr7_2:75502881-75502900 None:intergenic 35.0%
ACATGTGTTTATAAGTGGAG+TGG - chr7_2:75502903-75502922 Msa1076960:intron 35.0%
CATGTGTTTATAAGTGGAGT+GGG - chr7_2:75502904-75502923 Msa1076960:intron 35.0%
ATGTGTTTATAAGTGGAGTG+GGG - chr7_2:75502905-75502924 Msa1076960:intron 35.0%
CTAACAAGAAGCAAACCAAA+CGG - chr7_2:75502984-75503003 Msa1076960:intron 35.0%
!! TTTCTGGTATCTGCTTTTCA+TGG + chr7_2:75503435-75503454 None:intergenic 35.0%
TGAAAAGCAGATACCAGAAA+AGG - chr7_2:75503435-75503454 Msa1076960:intron 35.0%
! AGATACCAGAAAAGGTGTAA+GGG - chr7_2:75503443-75503462 Msa1076960:intron 35.0%
! TCCGTAGTGTTTGTAGATTT+TGG - chr7_2:75503639-75503658 Msa1076960:intron 35.0%
GCCAAAATCTACAAACACTA+CGG + chr7_2:75503643-75503662 Msa1076970:CDS 35.0%
!!! CAATGCGGTATATTTTGGTT+TGG + chr7_2:75503733-75503752 Msa1076970:CDS 35.0%
! TGGTTCAATGCGGTATATTT+TGG + chr7_2:75503738-75503757 Msa1076970:CDS 35.0%
ACTTCTTGTTCTAATCAAGG+TGG - chr7_2:75503782-75503801 Msa1076960:intron 35.0%
CTTCTTGTTCTAATCAAGGT+GGG - chr7_2:75503783-75503802 Msa1076960:intron 35.0%
GAGTTGACTGTTTCCAATAT+TGG - chr7_2:75504088-75504107 Msa1076960:intron 35.0%
!!! GCACAATGGTACATGTTTTT+TGG + chr7_2:75504265-75504284 None:intergenic 35.0%
TGTACCATTGTGCTGAAAAT+AGG - chr7_2:75504272-75504291 Msa1076960:intron 35.0%
TTGATCAAGAATGGGGTAAA+TGG - chr7_2:75494294-75494313 Msa1076960:three_prime_UTR 35.0%
AGAAGTAAAAGATTTGGGTG+AGG - chr7_2:75504465-75504484 Msa1076960:intron 35.0%
! CTAAACCTGCTGACAAATTT+TGG - chr7_2:75504617-75504636 Msa1076960:intron 35.0%
! TTTTCTCTATCCTTGCATGA+GGG + chr7_2:75504778-75504797 None:intergenic 35.0%
CAAATCTTCAATGAAGTTGG+TGG + chr7_2:75504801-75504820 None:intergenic 35.0%
TCAATTCTACAACTCTGCAA+CGG + chr7_2:75504848-75504867 None:intergenic 35.0%
TCACTACTACCAATTGCAAT+TGG + chr7_2:75504913-75504932 None:intergenic 35.0%
! ATTGGTAGTAGTGAATTCCT+TGG - chr7_2:75504919-75504938 Msa1076960:CDS 35.0%
! GGGTGATGTTTCGTTTGTTT+TGG - chr7_2:75494334-75494353 Msa1076960:three_prime_UTR 40.0%
CAAGATTACTACGGATGTGA+AGG - chr7_2:75494386-75494405 Msa1076960:three_prime_UTR 40.0%
! CAGGACTTCTTGTTTCAACT+TGG - chr7_2:75494436-75494455 Msa1076960:intron 40.0%
CAAGGCCAAAAAATGTTAGC+TGG + chr7_2:75494479-75494498 None:intergenic 40.0%
CAAATTAACTCGTGACAGGA+TGG + chr7_2:75494514-75494533 None:intergenic 40.0%
! TTGATGATAAGTCGCAACAG+AGG - chr7_2:75494680-75494699 Msa1076960:three_prime_UTR 40.0%
GAAGTCATTGCTACCAATTG+CGG + chr7_2:75494728-75494747 None:intergenic 40.0%
TGATTCACACAACACAAGTG+TGG + chr7_2:75495018-75495037 None:intergenic 40.0%
! AGTAGGAGTTACTTGACTTG+GGG + chr7_2:75495201-75495220 None:intergenic 40.0%
CAAGTAGGAGTTACTTGACT+TGG + chr7_2:75495203-75495222 None:intergenic 40.0%
! CAATCACAACTGGTTCAAGT+AGG + chr7_2:75495218-75495237 None:intergenic 40.0%
CTTGAACCAGTTGTGATTGA+TGG - chr7_2:75495219-75495238 Msa1076960:three_prime_UTR 40.0%
GGTTGAATTGGATGAAGAAG+AGG - chr7_2:75495348-75495367 Msa1076960:three_prime_UTR 40.0%
TGGTACATTTAACACTGCTG+AGG + chr7_2:75495485-75495504 None:intergenic 40.0%
AGTATAGAGGAGTGAGGATA+AGG + chr7_2:75495570-75495589 None:intergenic 40.0%
ACACAGACTATGAGATCAGA+AGG - chr7_2:75495893-75495912 Msa1076960:intron 40.0%
!! TTTAAACAAGTGGCACTGGT+AGG + chr7_2:75496005-75496024 None:intergenic 40.0%
TCAGTTTAAACAAGTGGCAC+TGG + chr7_2:75496009-75496028 None:intergenic 40.0%
!! GTGCCACTTGTTTAAACTGA+TGG - chr7_2:75496009-75496028 Msa1076960:intron 40.0%
GGACCATCAGTTTAAACAAG+TGG + chr7_2:75496015-75496034 None:intergenic 40.0%
ATCCATCTTGTCTTACGTCA+TGG - chr7_2:75496178-75496197 Msa1076960:intron 40.0%
AACCATGACGTAAGACAAGA+TGG + chr7_2:75496183-75496202 None:intergenic 40.0%
GAACATAAGTATTCGGCACA+AGG + chr7_2:75496374-75496393 None:intergenic 40.0%
!!! TTTTTTGGAGGGAAATTCGG+TGG - chr7_2:75496804-75496823 Msa1076960:intron 40.0%
GGTGGACAATCCAACTAATT+AGG - chr7_2:75496822-75496841 Msa1076960:intron 40.0%
! ACGTTACCCTCTCTTGTTTA+AGG - chr7_2:75496853-75496872 Msa1076960:intron 40.0%
! CGTTACCCTCTCTTGTTTAA+GGG - chr7_2:75496854-75496873 Msa1076960:intron 40.0%
! GTTACCCTCTCTTGTTTAAG+GGG - chr7_2:75496855-75496874 Msa1076960:intron 40.0%
TTCAAGCATCTTATAGGGAG+AGG + chr7_2:75497100-75497119 None:intergenic 40.0%
ATTCAAGCTTCTCTTAAGGG+AGG - chr7_2:75497598-75497617 Msa1076960:intron 40.0%
TTCAAGCTTCTCTTAAGGGA+GGG - chr7_2:75497599-75497618 Msa1076960:intron 40.0%
!! TGTTTTTGTTCTCACGTTCG+GGG + chr7_2:75497886-75497905 None:intergenic 40.0%
AATTTGAACCTGCAGCAGTT+TGG + chr7_2:75498005-75498024 None:intergenic 40.0%
! ACTTAAAGGCTTTGGCTGAT+AGG + chr7_2:75498130-75498149 None:intergenic 40.0%
!! TTTTTCGGTTGCTGCTGAAA+TGG + chr7_2:75498185-75498204 None:intergenic 40.0%
AAACTCCCAAAACATCACAG+CGG - chr7_2:75498214-75498233 Msa1076960:intron 40.0%
GAGAGATAAAGGACCTAAAC+GGG + chr7_2:75498675-75498694 None:intergenic 40.0%
AAATGTTGCAAGGAGGATAG+TGG - chr7_2:75498960-75498979 Msa1076960:intron 40.0%
! GATTGGTTGATATCATGAGG+GGG - chr7_2:75499651-75499670 Msa1076960:intron 40.0%
! GATTACCCTCTCTTGTTTAG+AGG + chr7_2:75499684-75499703 None:intergenic 40.0%
GAAGAATCATAGGATGAGAC+TGG + chr7_2:75499972-75499991 None:intergenic 40.0%
AAGACATAAGGCCAACAAGT+AGG - chr7_2:75501108-75501127 Msa1076960:intron 40.0%
ATATCGGGATGTTACAAGTG+TGG - chr7_2:75501327-75501346 Msa1076960:intron 40.0%
CTTTCTCATCTTGATTGTGC+GGG - chr7_2:75501466-75501485 Msa1076960:intron 40.0%
TTTCTCATCTTGATTGTGCG+GGG - chr7_2:75501467-75501486 Msa1076960:intron 40.0%
! CAACAAATGCATTGGTCAAG+TGG - chr7_2:75502033-75502052 Msa1076960:intron 40.0%
!! ATGCATTGGTCAAGTGGTTT+TGG - chr7_2:75502039-75502058 Msa1076960:intron 40.0%
ATTAATAATCGGTGAGGCCT+AGG + chr7_2:75502438-75502457 None:intergenic 40.0%
!! TCGACTCCAATTTTGTTTCC+AGG + chr7_2:75502489-75502508 None:intergenic 40.0%
GCTAAGGCTAAAATACGACA+AGG + chr7_2:75502789-75502808 None:intergenic 40.0%
! CTTAGCCTCTTATCTAGAGT+CGG - chr7_2:75502803-75502822 Msa1076960:intron 40.0%
! TACAACCGACTCTAGATAAG+AGG + chr7_2:75502811-75502830 None:intergenic 40.0%
CTAGAGTCGGTTGTATTGTA+AGG - chr7_2:75502816-75502835 Msa1076960:intron 40.0%
GTCCCACATCGGATAAAATA+TGG - chr7_2:75502875-75502894 Msa1076960:intron 40.0%
TTTCTTTGTATCCCCCCTAA+TGG - chr7_2:75503092-75503111 Msa1076960:intron 40.0%
! CAGATACCAGAAAAGGTGTA+AGG - chr7_2:75503442-75503461 Msa1076960:intron 40.0%
! TTAGTCCCTTACACCTTTTC+TGG + chr7_2:75503451-75503470 None:intergenic 40.0%
! AAAAGGTGTAAGGGACTAAG+TGG - chr7_2:75503452-75503471 Msa1076960:intron 40.0%
CAAGGGACAACTTTATGTTG+TGG - chr7_2:75504180-75504199 Msa1076960:intron 40.0%
CAATGCTCTTTCCTTGAAGT+TGG - chr7_2:75504228-75504247 Msa1076960:intron 40.0%
CAATTAGTAGAGTATGACGG+AGG - chr7_2:75504328-75504347 Msa1076960:intron 40.0%
CAAAAGGGGTTACTTCTTGA+AGG - chr7_2:75504393-75504412 Msa1076960:intron 40.0%
!!! CTTCTTGAAGGCTGTTTTTG+TGG - chr7_2:75504405-75504424 Msa1076960:intron 40.0%
!! TTGTTGGCTCGAGATTACTA+TGG - chr7_2:75504523-75504542 Msa1076960:intron 40.0%
!! TGTTGGCTCGAGATTACTAT+GGG - chr7_2:75504524-75504543 Msa1076960:intron 40.0%
CCAATCCAAAATTTGTCAGC+AGG + chr7_2:75504625-75504644 None:intergenic 40.0%
! CCTGCTGACAAATTTTGGAT+TGG - chr7_2:75504622-75504641 Msa1076960:intron 40.0%
ATCACTGGATGGAACAAAGT+TGG + chr7_2:75504649-75504668 None:intergenic 40.0%
! GTTTTCTCTATCCTTGCATG+AGG + chr7_2:75504779-75504798 None:intergenic 40.0%
ACATCTCTGCCAATTGCAAT+TGG - chr7_2:75504901-75504920 Msa1076960:CDS 40.0%
GGATGGAACAAAGTTGGACA+AGG + chr7_2:75494497-75494516 None:intergenic 45.0%
GTGACAGGATGGAACAAAGT+TGG + chr7_2:75494503-75494522 None:intergenic 45.0%
GAAACGCACACCCTCATATA+AGG - chr7_2:75494635-75494654 Msa1076960:three_prime_UTR 45.0%
GCACACCCTCATATAAGGTA+TGG - chr7_2:75494640-75494659 Msa1076960:three_prime_UTR 45.0%
TCATTGCTACCAATTGCGGT+TGG + chr7_2:75494724-75494743 None:intergenic 45.0%
TTCACACAACACAAGTGTGG+TGG + chr7_2:75495015-75495034 None:intergenic 45.0%
GATGAAGAAGAGGGCTTAGA+AGG - chr7_2:75495358-75495377 Msa1076960:three_prime_UTR 45.0%
GGATTACAAGCCACATTGCT+TGG - chr7_2:75495379-75495398 Msa1076960:three_prime_UTR 45.0%
CTGCTCAATGCTATAAGCCA+AGG - chr7_2:75495804-75495823 Msa1076960:intron 45.0%
TTGTGCTTGGATCAGTCACA+TGG - chr7_2:75496732-75496751 Msa1076960:intron 45.0%
TCAAGCTTCTCTTAAGGGAG+GGG - chr7_2:75497600-75497619 Msa1076960:intron 45.0%
TTGTCATTCCAAACTGCTGC+AGG - chr7_2:75497994-75498013 Msa1076960:intron 45.0%
AAAAGTCACGATACCTGACG+CGG + chr7_2:75498056-75498075 None:intergenic 45.0%
! TGTTGCCGCTGTGATGTTTT+GGG + chr7_2:75498222-75498241 None:intergenic 45.0%
! GTTATTTCCAGAACCACGTC+AGG + chr7_2:75498351-75498370 None:intergenic 45.0%
! TCTAGTTTGTGTGAGCACCT+TGG - chr7_2:75502070-75502089 Msa1076960:intron 45.0%
! GGCTGCCTTTGAAAACTCAT+GGG + chr7_2:75502417-75502436 None:intergenic 45.0%
! AGGCTGCCTTTGAAAACTCA+TGG + chr7_2:75502418-75502437 None:intergenic 45.0%
! TGAGTTTTCAAAGGCAGCCT+AGG - chr7_2:75502418-75502437 Msa1076960:intron 45.0%
! TTCTGCCCTTTTCCTTTTCC+TGG - chr7_2:75502468-75502487 Msa1076960:intron 45.0%
GAGTCGAAGTCCTTCTTCAT+CGG - chr7_2:75502502-75502521 Msa1076960:intron 45.0%
AGTCCTTCTTCATCGGTCAA+CGG - chr7_2:75502509-75502528 Msa1076960:intron 45.0%
ATCGCTTCTTACTTGCTCTG+TGG - chr7_2:75502639-75502658 Msa1076960:intron 45.0%
CGACTCTAGATAAGAGGCTA+AGG + chr7_2:75502805-75502824 None:intergenic 45.0%
!!! ACCTCACAAGGTGGTTTTGT+GGG - chr7_2:75502936-75502955 Msa1076960:intron 45.0%
AGAGTGTGCTATGAATGCGA+TGG - chr7_2:75503517-75503536 Msa1076960:intron 45.0%
TGGAATGCAAAGGTTGTGAG+AGG + chr7_2:75503690-75503709 Msa1076970:CDS 45.0%
!! CATGTGGTGATGGTTCAATG+CGG + chr7_2:75503748-75503767 Msa1076970:CDS 45.0%
GTTGAAGGGTTGTGATCATG+TGG + chr7_2:75503764-75503783 Msa1076970:CDS 45.0%
! TTTCGGTATTTTCCTCGGCT+CGG + chr7_2:75503880-75503899 Msa1076970:CDS 45.0%
! GTATGACGGAGGTCTATATG+TGG - chr7_2:75504339-75504358 Msa1076960:intron 45.0%
! GGGTGAGGTTTCGTTTGTTT+TGG - chr7_2:75504480-75504499 Msa1076960:intron 45.0%
TCTACAACTCTGCAACGGAT+AGG + chr7_2:75504843-75504862 None:intergenic 45.0%
!!! GTTTTTATTTTTTATTTTTT+TGG + chr7_2:75495076-75495095 None:intergenic 5.0%
!!! ATTATTGTAATTTTATTTTT+TGG - chr7_2:75497350-75497369 Msa1076960:intron 5.0%
!! ATTATTAAAAAAAAATATTG+AGG - chr7_2:75497533-75497552 Msa1076960:intron 5.0%
!! TAGAAAATAATAATAATATA+CGG - chr7_2:75499109-75499128 Msa1076960:intron 5.0%
!!! CAATTATTTTTTTATTTAAA+TGG - chr7_2:75500630-75500649 Msa1076960:intron 5.0%
!! ATATAAAGTATATAAAATAT+CGG - chr7_2:75501311-75501330 Msa1076960:intron 5.0%
!!! AAATTAAAAGTATAATAAAA+CGG + chr7_2:75503358-75503377 None:intergenic 5.0%
!!! CGCGCTGCTTTTGATATGAG+AGG + chr7_2:75495442-75495461 None:intergenic 50.0%
ATTCGAGATTCGGCTAGGCA+TGG + chr7_2:75495523-75495542 None:intergenic 50.0%
CCTAGCCGAATCTCGAATCT+CGG - chr7_2:75495525-75495544 Msa1076960:three_prime_UTR 50.0%
TGCAGCCGAGATTCGAGATT+CGG + chr7_2:75495533-75495552 None:intergenic 50.0%
! TCGGCTGCAAATTTTCCCCA+TGG - chr7_2:75495544-75495563 Msa1076960:three_prime_UTR 50.0%
AGGAGTGAGGATAAGGCCAT+GGG + chr7_2:75495563-75495582 None:intergenic 50.0%
! TGTTTGGAATAAGGGGGGAG+AGG - chr7_2:75497641-75497660 Msa1076960:intron 50.0%
!! GTTGTTTCTAGAACCGCGTC+AGG - chr7_2:75498040-75498059 Msa1076960:intron 50.0%
! AAAGGCTTTGGCTGATAGGC+AGG + chr7_2:75498126-75498145 None:intergenic 50.0%
! GTGTTGCCGCTGTGATGTTT+TGG + chr7_2:75498223-75498242 None:intergenic 50.0%
TCAACTCACCATACCTGACG+TGG - chr7_2:75498335-75498354 Msa1076960:intron 50.0%
TTCCAGAACCACGTCAGGTA+TGG + chr7_2:75498346-75498365 None:intergenic 50.0%
! TGTTGCAAGGAGGATAGTGG+AGG - chr7_2:75498963-75498982 Msa1076960:intron 50.0%
AGTGGAGGCTTAGTCACTGA+CGG - chr7_2:75498978-75498997 Msa1076960:intron 50.0%
AGGCTTAGTCACTGACGGAA+GGG - chr7_2:75498983-75499002 Msa1076960:intron 50.0%
TAGTCACTGACGGAAGGGTT+AGG - chr7_2:75498988-75499007 Msa1076960:intron 50.0%
AGTCATGCTTATCCGTGTGC+AGG + chr7_2:75500875-75500894 None:intergenic 50.0%
! CACCTTGGTTCGATTCCCTA+GGG - chr7_2:75502085-75502104 Msa1076960:intron 50.0%
GTGAACGACGTTCCTTCTTC+AGG - chr7_2:75502546-75502565 Msa1076960:intron 50.0%
CAAAACCACCTTGTGAGGTG+AGG + chr7_2:75502935-75502954 None:intergenic 50.0%
!! CACCTCACAAGGTGGTTTTG+TGG - chr7_2:75502935-75502954 Msa1076960:intron 50.0%
!!! CCTCACAAGGTGGTTTTGTG+GGG - chr7_2:75502937-75502956 Msa1076960:intron 50.0%
TAAGCGCCTGATGCTTGCTT+TGG - chr7_2:75503008-75503027 Msa1076960:intron 50.0%
ATGCTTGCTTTGGCCAAGCA+TGG - chr7_2:75503018-75503037 Msa1076960:intron 50.0%
ACAACGTCAGAGCCATTAGG+GGG + chr7_2:75503107-75503126 None:intergenic 50.0%
CACAACGTCAGAGCCATTAG+GGG + chr7_2:75503108-75503127 None:intergenic 50.0%
CCACAACGTCAGAGCCATTA+GGG + chr7_2:75503109-75503128 None:intergenic 50.0%
TCCACAACGTCAGAGCCATT+AGG + chr7_2:75503110-75503129 None:intergenic 50.0%
ATGCAAAGGTTGTGAGAGGC+AGG + chr7_2:75503686-75503705 Msa1076970:CDS 50.0%
GGGTTGTGATCATGTGGTGA+TGG + chr7_2:75503758-75503777 Msa1076970:CDS 50.0%
TAATACGAGAATCCGAGCCG+AGG - chr7_2:75503865-75503884 Msa1076960:intron 50.0%
TGCTACCAATTGCGGTTGGC+TGG + chr7_2:75494720-75494739 None:intergenic 55.0%
CATGGTGCTCGAGTTTGGCT+TGG + chr7_2:75495505-75495524 None:intergenic 55.0%
CTAGGCATGGTGCTCGAGTT+TGG + chr7_2:75495510-75495529 None:intergenic 55.0%
CCGAGATTCGAGATTCGGCT+AGG + chr7_2:75495528-75495547 None:intergenic 55.0%
GGAGTGAGGATAAGGCCATG+GGG + chr7_2:75495562-75495581 None:intergenic 55.0%
GAGGAGTGAGGATAAGGCCA+TGG + chr7_2:75495564-75495583 None:intergenic 55.0%
TCACGTTCGGGGTTGTGGAA+TGG + chr7_2:75497875-75497894 None:intergenic 55.0%
TGTTCTCACGTTCGGGGTTG+TGG + chr7_2:75497880-75497899 None:intergenic 55.0%
CACCATACCTGACGTGGTTC+TGG - chr7_2:75498341-75498360 Msa1076960:intron 55.0%
GAGGCTTAGTCACTGACGGA+AGG - chr7_2:75498982-75499001 Msa1076960:intron 55.0%
TTGTGCGGGGTGAATCGCTT+TGG - chr7_2:75501480-75501499 Msa1076960:intron 55.0%
! GCACCTTGGTTCGATTCCCT+AGG - chr7_2:75502084-75502103 Msa1076960:intron 55.0%
CACCCTAGGGAATCGAACCA+AGG + chr7_2:75502090-75502109 None:intergenic 55.0%
CCACCGTTGACCGATGAAGA+AGG + chr7_2:75502515-75502534 None:intergenic 55.0%
CCTTCTTCATCGGTCAACGG+TGG - chr7_2:75502512-75502531 Msa1076960:intron 55.0%
TCGGTCAACGGTGGTTCGTA+CGG - chr7_2:75502521-75502540 Msa1076960:intron 55.0%
GCAATCCTCACCTCACAAGG+TGG - chr7_2:75502927-75502946 Msa1076960:intron 55.0%
CCCCACAAAACCACCTTGTG+AGG + chr7_2:75502940-75502959 None:intergenic 55.0%
GCTTGGCCAAAGCAAGCATC+AGG + chr7_2:75503017-75503036 None:intergenic 55.0%
CAACGTCAGAGCCATTAGGG+GGG + chr7_2:75503106-75503125 None:intergenic 55.0%
!! CCCTAATGGCTCTGACGTTG+TGG - chr7_2:75503106-75503125 Msa1076960:intron 55.0%
CAAAGGTTGTGAGAGGCAGG+TGG + chr7_2:75503683-75503702 Msa1076970:CDS 55.0%
! TTGCGGTTGGCTGGCACTGA+TGG + chr7_2:75494711-75494730 None:intergenic 60.0%
CAGTGCCAGCCAACCGCAAT+TGG - chr7_2:75494712-75494731 Msa1076960:three_prime_UTR 60.0%
GTCAACGGTGGTTCGTACGG+CGG - chr7_2:75502524-75502543 Msa1076960:intron 60.0%
GGGGCAATCCTCACCTCACA+AGG - chr7_2:75502924-75502943 Msa1076960:intron 60.0%
GCATCAGGCGCTTAGCCGTT+TGG + chr7_2:75503002-75503021 None:intergenic 60.0%
TTGTGAGAGGCAGGTGGAGG+AGG + chr7_2:75503677-75503696 Msa1076970:CDS 60.0%
AGGTTGTGAGAGGCAGGTGG+AGG + chr7_2:75503680-75503699 Msa1076970:CDS 60.0%
! GGAAGGCGCACCCTCATGCA+AGG - chr7_2:75504765-75504784 Msa1076960:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 75494065 75505131 75494065 ID=Msa1076960;Name=Msa1076960
chr7_2 mRNA 75494065 75505131 75494065 ID=Msa1076960-mRNA-1;Parent=Msa1076960;Name=Msa1076960-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.25|0.4|1|0|0|5|1582|157
chr7_2 exon 75494065 75494430 75494065 ID=Msa1076960-mRNA-1:exon:18046;Parent=Msa1076960-mRNA-1
chr7_2 exon 75494518 75495751 75494518 ID=Msa1076960-mRNA-1:exon:18045;Parent=Msa1076960-mRNA-1
chr7_2 exon 75495781 75495788 75495781 ID=Msa1076960-mRNA-1:exon:18044;Parent=Msa1076960-mRNA-1
chr7_2 exon 75504672 75504875 75504672 ID=Msa1076960-mRNA-1:exon:18043;Parent=Msa1076960-mRNA-1
chr7_2 exon 75504888 75505131 75504888 ID=Msa1076960-mRNA-1:exon:18042;Parent=Msa1076960-mRNA-1
chr7_2 CDS 75504888 75505131 75504888 ID=Msa1076960-mRNA-1:cds;Parent=Msa1076960-mRNA-1
chr7_2 CDS 75504672 75504875 75504672 ID=Msa1076960-mRNA-1:cds;Parent=Msa1076960-mRNA-1
chr7_2 CDS 75495781 75495788 75495781 ID=Msa1076960-mRNA-1:cds;Parent=Msa1076960-mRNA-1
chr7_2 CDS 75495734 75495751 75495734 ID=Msa1076960-mRNA-1:cds;Parent=Msa1076960-mRNA-1
chr7_2 three_prime_UTR 75494518 75495733 75494518 ID=Msa1076960-mRNA-1:three_prime_utr;Parent=Msa1076960-mRNA-1
chr7_2 three_prime_UTR 75494065 75494430 75494065 ID=Msa1076960-mRNA-1:three_prime_utr;Parent=Msa1076960-mRNA-1
Gene Sequence

>Msa1076960

ATGGGAACAATTTTCTGGATCAATGCTTTGTCTTTGAAGTTGGTTCAATTTTCACCAAAAAACTTATGTTGTGGTAAAAAGAGTAATATCTGGAAGGTTTCTAGTACATACACTAAACAATTAGTAGAGTCTGATGGAAATCTCTATGTAGTTGATTTGTATATTGACGGTGAAAGGTTTTACAAATTGGGTCACATATTGAAGGCTATTTGTGTGGAAGTTTATAAGCTTGATCAAGAATGGGATGTAAAAGATTTGGGTGATGTTTCGTTTGTTTTGGGTAAAGACTCAAACATTGCATTGTTGGCTCAAGATTACTACGGATGTGAAGGAAATTGCATCTACTTCTATTGTGAAGACAGGACTTCTTGTTTCAACTTGGAGAATTTAGAGGCTAAGCCAGCTAACATTTTTTGGCCTTGTCCAACTTTGTTCCATCCTGTCACGAAGAGGTTCATACCAGAAAAGGTGTAA

Protein sequence

>Msa1076960

MGTIFWINALSLKLVQFSPKNLCCGKKSNIWKVSSTYTKQLVESDGNLYVVDLYIDGERFYKLGHILKAICVEVYKLDQEWDVKDLGDVSFVLGKDSNIALLAQDYYGCEGNCIYFYCEDRTSCFNLENLEAKPANIFWPCPTLFHPVTKRFIPEKV*