AlfalfaGEDB | Msa0253960

M. sativa cultivar zhongmu-4 / Msa0253960

KEGG: -
GO: GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
PFAM: PF18052.4

Nr:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0253960	KEH38438.1	78.516	1550	299	4	1	1546	1	1520	0.0	2475
Msa0253960	KEH38438.1	91.021	1548	111	2	2181	3728	1	1520	0.0	2853

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Swissprot:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0253960	sp\|Q9C8L6\|PPR80_ARATH	48.172	629	251	2	1576	2129	59	687	0.0	602
Msa0253960	sp\|Q9C8L6\|PPR80_ARATH	26.299	308	211	9	1756	2058	54	350	1.71e-20	103

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Trembl:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0253960	A0A072VAM2	78.516	1550	299	4	1	1546	1	1520	0.0	2475
Msa0253960	A0A072VAM2	91.021	1548	111	2	2181	3728	1	1520	0.0	2853

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TFs/TRs:

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Gene ID	Type	Classification
No data available in table

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Protein Kinases:

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Gene ID	Type	Classification
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Network:

Co-expression Network

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Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004180	Msa0253960	-0.808071	3.709158e-50	-8.615850e-47
Msa0011410	Msa0253960	-0.802950	4.397988e-49	-8.615850e-47
Msa0011440	Msa0253960	-0.809951	1.467517e-50	-8.615850e-47
Msa0027020	Msa0253960	-0.810164	1.320736e-50	-8.615850e-47
Msa0031410	Msa0253960	0.803269	3.778505e-49	-8.615850e-47
Msa0070120	Msa0253960	0.823617	1.257530e-53	-8.615850e-47
Msa0080100	Msa0253960	-0.817529	3.144778e-52	-8.615850e-47
Msa0090090	Msa0253960	0.811301	7.496246e-51	-8.615850e-47
Msa0093360	Msa0253960	-0.807694	4.459088e-50	-8.615850e-47
Msa0105140	Msa0253960	-0.828936	6.814409e-55	-8.615850e-47

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PPI

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Gene1	Gene2	Type
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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	bit score
Msa0253960	MtrunA17_Chr2g0314301	81.355	1550	282	3	1	1546	1	1547	2586
Msa0253960	MtrunA17_Chr2g0314301	79.550	1555	313	3	2181	3733	1	1552	2509
Msa0253960	MtrunA17_Chr2g0313541	75.081	1545	383	2	1	1545	1	1543	2369
Msa0253960	MtrunA17_Chr2g0313541	74.646	1554	388	3	2181	3733	1	1549	2343
Msa0253960	MtrunA17_Chr2g0313331	93.603	1235	78	1	2499	3733	1	1234	2367
Msa0253960	MtrunA17_Chr2g0313331	78.930	1234	253	3	319	1548	1	1231	2000
Msa0253960	MtrunA17_Chr2g0313481	73.874	1554	396	5	1	1546	1	1552	2321
Msa0253960	MtrunA17_Chr2g0313481	72.675	1559	418	5	2181	3733	1	1557	2261
Msa0253960	MtrunA17_Chr2g0313591	72.886	1549	403	2	1	1545	1	1536	2306
Msa0253960	MtrunA17_Chr2g0313591	72.592	1547	413	1	2181	3727	1	1536	2268

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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0253960	AT1G53600.1	48.172	629	251	2	1576	2129	59	687	0.0	602
Msa0253960	AT1G53600.1	26.299	308	211	9	1756	2058	54	350	1.74e-21	103
Msa0253960	AT1G53600.2	48.172	629	251	2	1576	2129	59	687	0.0	602
Msa0253960	AT1G53600.2	26.299	308	211	9	1756	2058	54	350	1.74e-21	103
Msa0253960	AT1G56690.1	36.166	553	317	5	1580	2129	61	580	4.96e-114	381
Msa0253960	AT1G56690.1	29.861	288	169	8	1579	1843	184	461	1.85e-27	122
Msa0253960	AT1G56690.1	22.034	354	252	8	1759	2106	24	359	3.19e-19	96.3
Msa0253960	AT4G02750.1	36.984	557	338	5	1579	2128	107	657	1.51e-113	382
Msa0253960	AT4G02750.1	28.116	345	225	8	1719	2060	61	385	3.22e-31	135
Msa0253960	AT4G02750.1	25.573	262	147	4	1779	2040	60	273	3.49e-17	89.7

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Find 716 sgRNAs with CRISPR-Local

Find 1238 sgRNAs with CRISPR-GE

CRISPR-Local

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CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACAGTTCTCCGGTGTGG+AGG	0.627609	2_2:-46381629	None:intergenic
AAAACAGTTCTGCAGTGTGA+AGG	0.601247	2_2:-46367645	None:intergenic
AAAACCAATTGCAGTAGAAG+TGG	0.538010	2_2:+46381383	Msa0253960:CDS
AAAACCCATTGCAGTAGAGG+TGG	0.630548	2_2:+46367399	Msa0253960:CDS
AAACTCAAAGATGTTAATTC+TGG	0.251181	2_2:-46384201	None:intergenic
AAACTCAAAGATGTTAGTTC+TGG	0.272131	2_2:-46370223	None:intergenic
AAAGAAGGAATGCAGATTCA+TGG	0.429761	2_2:+46375150	Msa0253960:intron
AAAGAGCTCCCAAAAGAAAT+AGG	0.329631	2_2:+46382212	Msa0253960:CDS
AAAGAGCTTCCAAAAGAAAT+AGG	0.309142	2_2:+46368228	Msa0253960:CDS
AAAGCCTCATTCTGGGGTTT+GGG	0.244255	2_2:+46376085	Msa0253960:CDS

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CRISPR-GE

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sgRNA_sequence	Strand	Position	Region	GC_content
GATCCTAACATCTTCATTAT+TGG	+	chr2_2:46366917-46366936	Msa0253960:CDS	30.0%
TCCTAACATCTTCATTATTG+GGG	+	chr2_2:46366919-46366938	Msa0253960:CDS	30.0%
TAATGATCACAAAGGATGTA+AGG	+	chr2_2:46367234-46367253	Msa0253960:CDS	30.0%
TTGGCAATTGTTTGAGAAAA+TGG	+	chr2_2:46367348-46367367	Msa0253960:CDS	30.0%
CAAATTAATAAACGACCTCA+AGG	+	chr2_2:46367735-46367754	Msa0253960:CDS	30.0%
ATCATGAATTCTAACCCATT+CGG	-	chr2_2:46367788-46367807	None:intergenic	30.0%
GGTACAGTTCAATAAAACAA+TGG	+	chr2_2:46367869-46367888	Msa0253960:CDS	30.0%
ATTAGAAGTAGCTTCAACTT+GGG	-	chr2_2:46367979-46367998	None:intergenic	30.0%
AATTAGAAGTAGCTTCAACT+TGG	-	chr2_2:46367980-46367999	None:intergenic	30.0%
TTTGTTAAGAGACAAAGTGA+TGG	-	chr2_2:46368108-46368127	None:intergenic	30.0%

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Chromosome	Type	Strat	End	Strand	Name
chr2_2	gene	46366386	46385647	46366386	ID=Msa0253960;Name=Msa0253960
chr2_2	mRNA	46366386	46385647	46366386	ID=Msa0253960-mRNA-1;Parent=Msa0253960;Name=Msa0253960-mRNA-1;_AED=0.29;_eAED=0.29;_QI=27\|0.42\|0.33\|0.66\|1\|1\|15\|44\|3733
chr2_2	exon	46366386	46369223	46366386	ID=Msa0253960-mRNA-1:exon:14198;Parent=Msa0253960-mRNA-1
chr2_2	exon	46369322	46369603	46369322	ID=Msa0253960-mRNA-1:exon:14199;Parent=Msa0253960-mRNA-1
chr2_2	exon	46369698	46370420	46369698	ID=Msa0253960-mRNA-1:exon:14200;Parent=Msa0253960-mRNA-1
chr2_2	exon	46371278	46372099	46371278	ID=Msa0253960-mRNA-1:exon:14201;Parent=Msa0253960-mRNA-1
chr2_2	exon	46372870	46372957	46372870	ID=Msa0253960-mRNA-1:exon:14202;Parent=Msa0253960-mRNA-1
chr2_2	exon	46374447	46374828	46374447	ID=Msa0253960-mRNA-1:exon:14203;Parent=Msa0253960-mRNA-1
chr2_2	exon	46374936	46375033	46374936	ID=Msa0253960-mRNA-1:exon:14204;Parent=Msa0253960-mRNA-1
chr2_2	exon	46375157	46376334	46375157	ID=Msa0253960-mRNA-1:exon:14205;Parent=Msa0253960-mRNA-1
chr2_2	exon	46376657	46376737	46376657	ID=Msa0253960-mRNA-1:exon:14206;Parent=Msa0253960-mRNA-1
chr2_2	exon	46379442	46379499	46379442	ID=Msa0253960-mRNA-1:exon:14207;Parent=Msa0253960-mRNA-1
chr2_2	exon	46380380	46383213	46380380	ID=Msa0253960-mRNA-1:exon:14208;Parent=Msa0253960-mRNA-1
chr2_2	exon	46383304	46383585	46383304	ID=Msa0253960-mRNA-1:exon:14209;Parent=Msa0253960-mRNA-1
chr2_2	exon	46383676	46384398	46383676	ID=Msa0253960-mRNA-1:exon:14210;Parent=Msa0253960-mRNA-1
chr2_2	exon	46384666	46385487	46384666	ID=Msa0253960-mRNA-1:exon:14211;Parent=Msa0253960-mRNA-1
chr2_2	exon	46385586	46385647	46385586	ID=Msa0253960-mRNA-1:exon:14212;Parent=Msa0253960-mRNA-1
chr2_2	five_prime_UTR	46366386	46366412	46366386	ID=Msa0253960-mRNA-1:five_prime_utr;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46366413	46369223	46366413	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46369322	46369603	46369322	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46369698	46370420	46369698	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46371278	46372099	46371278	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46372870	46372957	46372870	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46374447	46374828	46374447	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46374936	46375033	46374936	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46375157	46376334	46375157	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46376657	46376737	46376657	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46379442	46379499	46379442	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46380380	46383213	46380380	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46383304	46383585	46383304	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46383676	46384398	46383676	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46384666	46385487	46384666	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	CDS	46385586	46385603	46385586	ID=Msa0253960-mRNA-1:cds;Parent=Msa0253960-mRNA-1
chr2_2	three_prime_UTR	46385604	46385647	46385604	ID=Msa0253960-mRNA-1:three_prime_utr;Parent=Msa0253960-mRNA-1

Gene Sequence

>Msa0253960

ATGGACGTTATTATTTCAATTGCTGCTAAAATTGCTGAAATTATGGTTGCACCTGTTGGACGTCAATTTGGTTACATACTCTACTACAAGGGCAACCTTAAAAAGATGAAAACTGATCTCCAAAAGCTGGAGGGAGTGAGAGACAGTGTACAACACACCGTTGATGAGGCTAGAAGAAATGGAGAAGAGATTGAAGGTACTGTGCAGAACTGGCTGAATAAAGTGGACAACACTGTTGATGAGGCAGCGAAACTTATTGACACTCAAGACCATGCGAAAGGTCATTGTTTTATGCGAAACTTTCCCAATCTGTGCAGAAGGCATCAGCTGAGCAGGAAGACTAAAAAGATAATACAAGGGATTTCTGAAGTCATAGCAGAAGGAAAATTTGACAAAATTTCTTACCGTGCTTCTTTTCAAGTAACCGCCACACCATTTGGTAGAGGTTATGAGTCCCTGCGCTCAAGAACATCAATGCTGAATGAGATGATGCTTGCATTGAAGGATCCTAACATCTTCATTATTGGGGTGTATGGGATGGGTGGAGTGGGGAAGACAACATTAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGACGAGTCATTTAGTGCTGTAGTTATGGCTACTATAACTGGTTCTCCAGATGTGATAGAAATTCAAGGCCAAATTGCTGATGCTTTGGATATGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAAGAGAATTGCGTGAAAGGATAACCAAGGAGGAAAGTATTCTAGTTGTGTTGGATGACATATGGGGAAGACTTGATTTGACAGAATTGGGGATTCCTTTCGGTAATGATCACAAAGGATGTAAGGTGGTGGTGACATCCAGAGATCTGAATTTGTTGAGCTGTGAGTTTGGTACTCAAAGAGAATTTAGACTTGAAGTTTTACATGAGGAGGATAGTTGGCAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAAATTTCAATATAAAACCCATTGCAGTAGAGGTGGCCAAATGTTGTTCTGGTTTGCCCCTATTGATAGTTACCGTGGCAAAGGCTCTGAGGAAAAAAGATGACTTTTATTGGAAAAGCACATTGAATGAGTTAGAGAGATTTAATCAAGAAGGCCTGCATAAGAAAATCTATTCTGCTTTGGAATTGAGTTATAATTGCTTAGAAAGTGATGAACTAAAGTCACTATTCTTATTCATTGGTTCATTTGGACTAGATTACCTTCACACTGCAGAACTGTTTTCATGTTACTGGGGGTTGGGCTTATATAGACACTCCCACACATTGACAAATGCAAGAACTAGATACTACAAATTAATAAACGACCTCAAGGCCTCTTCACTATTACTTGAGTCTGAAACCGAATGGGTTAGAATTCATGATGTTGTAAGAGATGTGGCTAAATCAATTGCATCTAGGACTCAGCCAACCTATGGGGTGAAAAGGTACAGTTCAATAAAACAATGGCCAGAAATAGATCAGCTTCTACAATTCCATCAGATTATCCTACCTTGGTCTTATGTTTACAAGCTCCCTGAGAAGCTAGAGTGCCCCAAGTTGAAGCTACTTCTAATTCATAATATAGGTGACTATTTAGAACTCCCCGATGACTTCTTCTCTGGGATGAGAGAGCTAAAGGTCGTTAATTTTTATGGAATGATGTTTACTCCTTCTCCACCACCATCACTTTGTCTCTTAACAAAAATCCAATCGTTAGAGCTGACTGGATGTGTGTTTGAAGACATATCAATAGTTGCAGAGCTGAAAAGTGTAGAGATTCTCAGCCTTGAAAGATCTGATATTAAAGAGCTTCCAAAAGAAATAGGACAATTAACCAAGCTTCGAATGTTGAATTTAACCAACTGCTTTGGACTGAGATTCATTCCTCCAAATCTTATTTCAAGCCTAACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGGATGTCAAGGGAAGCAACAATGCAAGTCTAGAAGAGCTAAGGAATTTGTCTCATCTAACTACTTTGGACATAATGATTCAAGATGCTTCTGTTTTGCCAAGGGACTTGCAGGTCTTTGCAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGAAATGGTCTTTGGAATGGTCTGGAGGTGCTTCTGAATCGTCAAGAATACTTAAGCTCGTGGATAATAGTAGTTCAAGCATTTTTTTCGATCGTGGGTTTAACTTCTTGTTGAATTCTGTTGAGGACATGTCACTAGCGAAAATACAATGTGTTAGAAATGTCCTTTATGAATTGAACAGGGAAGGTTTCCCACAATTAAAGCATTTACACATTCAAGACAGTACTGAGTTAAAGTACATCATTAACTCAATAGGGTGGGTTCATCCCTATCCTGCTTTACCCAACTTAGAGACTTTGACCCTTCAAAATCTGTTTATTCTTGAAGAAATATTCCATGGCCCAATTCCAGTTCAGTCTTTTACCAAACTTAAATCTTTTGTAGTCAAAGGTTGTAACAAGTTGAATAACATTTTATGGTACTCTCTCGTTAGAAACCTTCCTCAACTTCTTGAAATAAAAATTTCTGATTGCAAAATGATTACAGAAATCGTAGCTAAGCAAACAACTGATGCTAAGAAAGAAATCGACAAGATCACGTTCCCTAAGTTGCGTTCTCTTGTTCTTGAGCATTTGCCTAGTCTCGTTAGTTTTTGTTCCGTGCCATTCAAAGTTGATAAGGATCTCAAAAAGCGTGGTGAAAATTATGAAGGTACACCGTGCATACCTGTGGCCCTAATTAATGAAAAGGTTGAGATGCCCCACCTTGAACTATTGAAGCTGTCTAATATCAATTCTAGGAAACTGTGGGATGACAACCTTCCTAGTCATTCTTGCATTCAAAACTTGAGGAGTTTGACAATTGACAAATGTGGTAGCATAGCTTACACATTTTCGTCCTCAGTGGCTAGAGAACTTGTAAACCTGCAATATCTTGGGATTAGTAATTGCGAAAAGTTGGAATGGATATTTGCATCAGATGGAAAGTTTGACAATCTTCCTTCATCTCAGAAACCAATCTATATTGATGAGGTTATATTTCCAAACTTGGAGACATTGGTAATCTCCCACATGGAACACTTGAAGTCAGTATGGCACAGTCAACTAGCTCCAAACTCATTCTGCAAACTGAAGCAGTTGAAAATTGAATTCTGCAATGAACTTTCAATTTTAGTTCCAGCTTATGTGCTTAATAAATTACAAAACCTGGAGATAGTGACTGTAGCTAATTGTCCCACACTTGAAGTTGTCTTTGAAACACAAGGTCTTAATAAAGATGGTGATAGACAGACAAGGCTGGAAATGCAAATGAGAACTCTCAGTTTGGAACATTTACAGATATTAAAACACATATGGAGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACCTTTGCATATTGAAAGTTATCGAATGCAAAGCCATTAATCATGTTCTTCCCCTCTCGGTGGCTAAAGAGCTTCAGCATCTCCAAGAGCTTTATATAGAAAAATGTGGCATAGAGATTATTGTAGCACAGGATGAAATGGCTGACACAGTTCCAATACTTATATTCCCAGAACTAACATCTTTGAGTTTTCAAGATTTGACACAACTTCAAAGCTTCTACCGTGGATCACATATCTTGGATTGTCCTGTTTTAAGATATGTGGATATCCTTCATTGTGACAAGCTTGAGCTATTCATGCCGAAGTCTCTAAATTATCGAGACAATATTCCAGTTGATACACTGCCCCTTCTCTCAATTGAAAAGGTTGTCACCAATGCAAAGGAGCTGATTCTGAACTGCAAGGATGTCACCATGTTATGCAATGGTCAACTTAATGGTGAGCTGATCTACACAGTAAAATCACTTTGCCTACGGTGTTTTCATGACAAATCCGAAAATTTTCCATCTGGCTTCCTCCAAAAATTTATCAATCTGGAATATCTTAAGGTGTCATGCAGTTCCTTCTCAGAGATATGCTTGAGTGGAAGCATTTGCGCCGGACATTTTGAAACAACTATGAAATTGAGAAGACTAGTACTTGCTGGATTAAAAAACCTTGAGTTTATATGTAGAGAGAAATCTGAGGTGCAACCGGTTCTTCGAAACATTGAAATATTGGAAGTATATATATGCTCTAGACTAAAGAATATATTTCCATCTTCAATGTTGTTTGAGAATTTAGAGCAGTTGGAGGTGGGTGATTGTGCTGGATTGGAAAATATTATGAAATCGTCAACAGCTACAAGTTTACAAAAACTTAGAAAATTATGGATATATAATTGTGAAAAGATAGAAGAAATAGTTGCAAGTGATAACGAAAATGATGCTTTTGAGATAACTTTTATGAAATTGGAGCATCTGCAGTTGAGTAACTTACCAATGCTAAGAAGTTTTTGCAAGGGAAGACATGGCTTCAAATTTCCACAGCTGCAGAACTTATTTGTAATAGATTGTCCCATGATGGAAACTTTCTCTTACGGAGTGTTGAACGCACCAAAGCTCATAGAAGTACATGTAAAGGAACAAGATGAATGGCATTGGAATGGTGACCTTAATAGTACTATAAGAAAATTCGCAGCTAAAACGAGAAATTGCAATATCTCAGTTTCCTCTCTTTCTATATGTCTCCGGCTTTTAGGAAAAAGGGTCCTAGTAACCCAGAATTCGTCGGAAGAAAATGGACGAAACGGTAATGTTAAAGCTGCAGAAACAATCTTCAACAGAGTGTCCCAAAAGAATATCGTCACTTGGACTGCCATGCTCATTGTCTATGCTCAAAATGGTCAAATCATAAATGCCCGTAAACTGTTCAATGAAATGCCTGAACGAACAACTGCTACTTATAATGCCATGATATCCGGTTATATCCGTAATGGTTGTAATGTGACTAAAGCTTATGAGCTTTTTACTTCATTTAACGAGAAAAATGCAGTGTCTTATGCTGCCATGATCATGGATTTAGTTAAGGCTAGGAAGTTCCATTTGGCGGAGGAGCTTTACCGTGAAGCTCCGTGTGAGTTTCGTGACCCGGTTTGTTCAAATGCTTTGATAAATGGAGTTGAGAGGGATGATTATGCTAGGATGTTGTTTGATAGAATGCCTGAGAGAAATGTGGTTTCTTGGAGTGCAATGATTGATGGGTATATGGAGAAAGGAATGCAGATTCATGGGTTGGTTTCAAGATTGGGATTTGAGTTTGGTAGTGTTTTGAGTAATACTATTATTACTATGTATTCGTTGTTTGGGTTCACTGACATGGCAAAGAAAGTGTTTTCTGCTATGGGTAATAAAGATTTAGTTACTTGGAATTCTTTGATTTCTGGATATATTTATAACAATGAAGTGGAAGCGGCTTATGAAGTTTTTGAGAGGATGCCGGAGAAGGATTTGATTTCTTGGATAGCCATGATCAGGGGGTTTGCAACGGATGGAAGAATTGGAAAGGCCGTTGAACTGTTTGATACGTTGACAGAGAAAGATGATTTTGTTTGGACAGTTCTTATATCTGGTTTTGTGAGTAATGAGGAGTACGAGGAAGCTTTGTGTTGGTATGTTCGGATGAACCGGGAAGGGTGCAAGCCTAATCCTTTAACTATTAGTAGTGTTCTTTCTGCTTCGGCTTCTTTGGTGGCACTGAATGAAGGGCTTCAGATTCATTCTCATGTTCTGAAGATGAACCTGGAATATGATATTTCAATACAAAATTCACTTATATCATTCTATGCCAAATGTGGAAATGTAACCGATGCTTACAAGATCTTCATAGACGTTGTTGAACTGAATGTTGTCTCTTATAACTCAGTCATTAATGGTTTCGCACAAAATGGCTTTGCCGAAAAAGCTCTCAATATGTATAAAACAATGCAGAGTGAAGGCCTTGAACCCAACCGTGTTACTTTCCTTGCTGTTCTTTCAGCTTGCACTCATGCAGGACTTGTTGAAGAGGGATGGAATTTATTTGGCACCATGAAACTTCGTTACCAGGTCGAGACAGACGCTGATCATTACGCCTGCATGGTTGATCTACTTGGCCGTGCCGGCTTGCTTGATGAAGCTAATGATTTGATTCGTTCAATTACGGTAAAGCCTCATTCTGGGGTTTGGGGGGCTCTTCTTGCTGCAAGCAGTGCTCACCAACGTCTTGATCTTGCCAAGCTTGCAGCTCAACATATTACCGAGCTGGAGCCTGCAAATGCGACTCCTTATGTGGTATTATCCAACATGTATTCTGCTTCTGGACAAAAGATTGAAGGTGACTTAGTAAGAAAGACCAAGAATTTAAAAGGAATAAAAAAAAGTCCTGGTTGTAGTTGGATTACTATCAAAGATAAGTTACCTGTTAATGTTATCATCTTACTAGTGGATAGGCGTGAACCTCAATTACAACCTGATGCAGCTGCTATGAAGACTTCACTACAGCCACCGCCTAATCTGCGGCAGACAAGGGTGGAGCCACCAAGTTGGCCTGCTGATAGCAAAGGGGTGGCCATGGATGTTATTATTTCAATTGCTGCTAAAATTGCTGAAATTATGGTTGCACCTATTGGACGTCAATTTTGCTACATACTCTACTACAAGGGCAACCTTAAAAAGATGAAAACTAATGTCCAAAAGCTGGAGGGAATAAAAAACAGTGTGCAACACACTGTTGATGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCTAAACTGGCTGAAGAAAGTGGACAACACTTTTTCTGAGGCAAATAAACTTATTGACACTGAAGACGTTGCAAAAAGTCAACGCTCCATGCAAAACTTTCCCAATCTGTGCACAAGGTATCAGCTGAGCAGGAAGATTAGAAAGATGATGCAAAAGATTTCTGAAGTCATAGCAGAAGGAAAATTTGACAGAATTTCTTACCGTGCTTCTTTGCAAGTAACAATCACGCCATTTGGTAGAGGTTATGAGGCCCTGCACTCAAGAACATCAATGCTGAATGAGATTATGCTTGCGTTGAAGGATCCCAACATCTTCATTATTGGTGTGTATGGGATGGGTGGAGTGGGGAAAACGACATTAGTGAAAGAATTAGCTTGGCAAGCTGAGAATGATGAGTCATTTAGTGCTGTAGTTATGGCTACCATAACTGGTTCTCCAGATGTGATAGAAATTCAAGGCCAAATTGCTGATGCTTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAAGAGAATTGCTTGAAAGGATAAGCAAGGAGAAGAGTATTCTTGTTGTGCTAGATGACATTTGGAGCAGACTTGAATTGACAGAACTGGGGGTTCCATTTGGTAATTATCATAAAGGATGTAAGGTGGTGGTGACATCTAGAGACCAGAATTTGTTGAGCTGTGAGTTTGGTACTCAGAGAGAATTTAGACTTGAAGTTTTAAATGAGGAGGATAGTTGGCAATTGTTTAAGAAAATGGCAGGTGATGGTGTTCAAGATTTCAATATAAAACCAATTGCAGTAGAAGTGGCCAGACGTTGTGCTGGTTTTCCGCTTTTGATTGTTACTGTGGCAAAGGCTTTGAGGAAAAAAAATATCTTTGATTGGAAAAGCACATTAAATGAGTTAAAGAGATTTGATCAAGAAGGGCTGCATAAGAAAATATATTCTGCTTTGGAATTGAGTTATAATTGCCTAGAAAGTGATGAGCTAAAGTCACTGTTCTTATTCATAGGTTCGTTTGGACTAGATTACCTCCACACCGGAGAACTGTTTTCAAGCTATTGGGGGATGGGCTTATATAGACACTCTCACACATTGACAGATGCAAGAACAAGATACTACAAATTAATAAATGACCTAAAGGCTTGTTCACTGTTACTTGAGTCTGAAGCTGAATTAATTAGAATTCATGATGTTGTTAGAGATGTGGCCAAATCAATCGCATCTAGGACTCGACCAACCTATGGTGTGCAAAGGTTCGCTTTGATAAAACCGTGGCCAGAGATAGATCAGCTCCAAAAATGCCATCAGATCAGTCTGCATTGGTCTTATATTTACAATCTTCCTGAGAAGATGGAGTGCCCAGAGTTGAAGATACTTATACTTGAAAATATAGGTGAGTATTTAAAAATCTCCGATGACTTCTTCTCTGGGATGAGAGAGCTACAGGTCGTTAGTTTATATGGAATGATGTTTGCTCCTTCTCCACCACCATCTCTTTGTATCTTGACAAAAATCCAAACCCTGGAGCTGGCTGGATGTGTGTTAGAAGACATATCAATGGTTAAAGAGCTAAAGAGTTTAGAGATTCTCAGCCTTGAAAGATCTGATATTAAAGAGCTCCCAAAAGAAATAGGACAACTAACTAAGCTTCGAATGCTAAATTTAGCCAATTGCTCTAGACTGAGATTCATTCCTGAAAATCTTATTTCAAGCCTAACATGCTTGGAAGAGTTGTACATGGGGAATTGTTTTATCCAATGGAATGTCAAAGGACGCAAAGATCAAAGCAACAATGCAAGTCTAGATGAGCTAAGAAGTTTGTCTCGTCTAACAAGTTTAGACATAATGATTCAAGATGCTTCAGTTTGTCCAAAGGACTTCCAGGTCTTTGCAAAACTTGAAAGATACAACATATTTGTTAGTGATATGTGGAAATGGTCTTTGGAATGGTCTGGATGTGCTTCTGAATCTTCAAGAATACTTAAGCTCGCGGACAGTAGGAGTTCAAACATTCTTTTGGATCATGGGATTAACTTTTTGTTGAATTCAGCAGAGGACATGTGCCTTGCCAAAATTCAATGTGTTAGAAATGTCCTTTATGAACTGAATAGGGAAGGTTTTCCGCAATTAAAGCATTTGCAGATTCAAGATAGTACTGAGCTAAAGCACATCATTAACTCAATTGAGTGGGTTCATCCTTATCCTGCTTTACCCAACTTAGAGAGTTTAGTTCTTCAAAATCTATTTAATCTTGAAGAAATATGCCATGGCCCAACTCCAATTCAATCTTTTACCAAACTAAAATCTTTTGAAGTCATAGGCTGTGACAAGTTGAAGAATCTTTTATGGTACCCTTTGGTCAGAAACCTTCCTCAACTTCTCGAAATAAAAATTTCTGATTGCAAAATGATTACAGAAATCATAGCTGAGCAAACATATGATGCTGATAAAGAAATCGATAAGATTATGTTCCATAAGTTGCGTTCTATTGTACTTGAGAACTTGCCTAGTCTCATTAGTTTCTGTTCCGTGTCATTGACAGTTGATATCAAAAGGTGTGGTGAAAATTATCAAGGTACACAATGCTTACCCGTGGCCCTAATGGATGAAAAGGTTGTGATGCCCCACCTTGAACTCTTGAAGCTGTCTAAGATCAATTCTAGGAAACTGTGGGATGACAAACTTTCGGGTCATTCTTGCATTCAAAACTTGAGGAGTTTGACAATTGACAAATGTGGTAGCATAGTGTATGCATTCTCATCCTCAATGGCTAGAGAGCTTGTAAACCTGCAACATCTTGAGATTAGTAATTGCCAAATGTTGGAGGAGATAATTGTCTCAGATGGAAAGTTTGACAATCTTCCTTTATCTCAGAAACCACTCTATAATGATGAGGTTATATTTCCAAACTTGGAGACATTGGTAATATCCCACATGGAACACTTAAAGTCAATATGGCACAATCAACTGGCTACGAAATCATTATGCAAACTGAAACAGTTGAAAATTGAATTCTGCAATGAAATTTCAAATGTTATTCCATCTTATGTGCTTAATAAATTACAGAATCTCGAGATAGTGACTATAGATAATTGTCACACACTAGAAGTTGTATTTGAAACACAATGTTTAAAAGCAGATGGTGGTAGACAGACAAGGCTGGAAATGCAATTGAGAACTCTCAGTTTGAAACATTTACCAATGCTGAAACATATATGGAGTGGGAATCCTAATGAAAGCTTCATGTTTCAAAACCTCTGCCTATTGAATGTTACTGAATGCAAAAGCCTTATTCATGTTTTTCCCCTCTCAGTGGCTAAAGAGCTTCAGCATCTCCAAGAGCTTTATATTGAAAAATGTGGCATAGAGATTATTGTAGCACAAGATGAAATGGTCGACAGATTTCCAATATTTATTTTTCCAGAATTAACATCTTTGAGTTTCCAAGATTTGACAGAACTTCGAAGCTTCTACAATGGATTACATACCTTGGATTGTCCTGTTTTAAGGGATGTGGATGTGCTTCATTGTGACAAGCTCGAACTATTCAAGCCAATGTCTCTAAATTGCCGAGACAATGTCCCGGTTGATACACTACCCCTTCTCTCAATTGAAAAGGTTGTCCCCAACATAAGGGAGCTTATTCTTAGCTGCAAGGATGTCTCCATGTTACGCAATGGTCAACTTAATGATGAGCTTATTTACGCGGTGAAATCTCTTTGCCTACGATGTTTTCATGACGAGTCTGTCAAGTTTCCATCAGGTTTCCTCCAAAGGTTTATCAATCTCGAAAACCTTAAGTTGACATGTAGTTCCTTCTCAGAGATTTTCTCGAGTGGAAGCGTTTTCACTGGACATTATAAAACAAGTATGAAGTTGAGAAGTTTAGTACTCAGTAACTTACACAACCTCGAGTTTATATGTGAAGTGAAATCTGAGGTGCAACCAATTATTCAGAACATGGAAAATTTGGTTGTATATAGATGTTCTAGACTCAAGAATATAGTTCCATCCTCGGTGCTGTTTGAGAATTTAGAGCACTTGCAGGTGAGCGATTGTGCTGGATTGGAAATTATTGTGAAATCATCAACAGCTGCCAGTTTACAAAAACTCACAAAGTTGTGCATAGATGATTGTGAAAAGATGGAAGAAATAGTTGCAAGTGATGATGAGAATGATGCTTCTGAGCTAGATTTTATGAAACTGGAGTATCTGAGATTGAGTAACTTACCAATGCTAAGAAGTTTTTGCAAGGGAAGACATTGCTTCAAATTTCCACAACTGCAGAAGTTATTTGTAGTAGATTGTCCCATGATGGAAACTTTCTCACCCGGAGTGTTGAATGCACCAAAGCTCATAGCAGTGCATGTGAATGAACAAGATGAATGGCATTGGAATGGTGACATTAATACTACTATAAGAAAATTTGTAGCAAAAACGAACTCTAAGGATGATTGA

Protein sequence

>Msa0253960

MDVIISIAAKIAEIMVAPVGRQFGYILYYKGNLKKMKTDLQKLEGVRDSVQHTVDEARRNGEEIEGTVQNWLNKVDNTVDEAAKLIDTQDHAKGHCFMRNFPNLCRRHQLSRKTKKIIQGISEVIAEGKFDKISYRASFQVTATPFGRGYESLRSRTSMLNEMMLALKDPNIFIIGVYGMGGVGKTTLVKELAWQAENDESFSAVVMATITGSPDVIEIQGQIADALDMKFNKETKEGRARELRERITKEESILVVLDDIWGRLDLTELGIPFGNDHKGCKVVVTSRDLNLLSCEFGTQREFRLEVLHEEDSWQLFEKMAGDVVQNFNIKPIAVEVAKCCSGLPLLIVTVAKALRKKDDFYWKSTLNELERFNQEGLHKKIYSALELSYNCLESDELKSLFLFIGSFGLDYLHTAELFSCYWGLGLYRHSHTLTNARTRYYKLINDLKASSLLLESETEWVRIHDVVRDVAKSIASRTQPTYGVKRYSSIKQWPEIDQLLQFHQIILPWSYVYKLPEKLECPKLKLLLIHNIGDYLELPDDFFSGMRELKVVNFYGMMFTPSPPPSLCLLTKIQSLELTGCVFEDISIVAELKSVEILSLERSDIKELPKEIGQLTKLRMLNLTNCFGLRFIPPNLISSLTCLEELYMGNCFIQWDVKGSNNASLEELRNLSHLTTLDIMIQDASVLPRDLQVFAKLERYNIFVGDMWKWSLEWSGGASESSRILKLVDNSSSSIFFDRGFNFLLNSVEDMSLAKIQCVRNVLYELNREGFPQLKHLHIQDSTELKYIINSIGWVHPYPALPNLETLTLQNLFILEEIFHGPIPVQSFTKLKSFVVKGCNKLNNILWYSLVRNLPQLLEIKISDCKMITEIVAKQTTDAKKEIDKITFPKLRSLVLEHLPSLVSFCSVPFKVDKDLKKRGENYEGTPCIPVALINEKVEMPHLELLKLSNINSRKLWDDNLPSHSCIQNLRSLTIDKCGSIAYTFSSSVARELVNLQYLGISNCEKLEWIFASDGKFDNLPSSQKPIYIDEVIFPNLETLVISHMEHLKSVWHSQLAPNSFCKLKQLKIEFCNELSILVPAYVLNKLQNLEIVTVANCPTLEVVFETQGLNKDGDRQTRLEMQMRTLSLEHLQILKHIWSGNPNESFKFQNLCILKVIECKAINHVLPLSVAKELQHLQELYIEKCGIEIIVAQDEMADTVPILIFPELTSLSFQDLTQLQSFYRGSHILDCPVLRYVDILHCDKLELFMPKSLNYRDNIPVDTLPLLSIEKVVTNAKELILNCKDVTMLCNGQLNGELIYTVKSLCLRCFHDKSENFPSGFLQKFINLEYLKVSCSSFSEICLSGSICAGHFETTMKLRRLVLAGLKNLEFICREKSEVQPVLRNIEILEVYICSRLKNIFPSSMLFENLEQLEVGDCAGLENIMKSSTATSLQKLRKLWIYNCEKIEEIVASDNENDAFEITFMKLEHLQLSNLPMLRSFCKGRHGFKFPQLQNLFVIDCPMMETFSYGVLNAPKLIEVHVKEQDEWHWNGDLNSTIRKFAAKTRNCNISVSSLSICLRLLGKRVLVTQNSSEENGRNGNVKAAETIFNRVSQKNIVTWTAMLIVYAQNGQIINARKLFNEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFNEKNAVSYAAMIMDLVKARKFHLAEELYREAPCEFRDPVCSNALINGVERDDYARMLFDRMPERNVVSWSAMIDGYMEKGMQIHGLVSRLGFEFGSVLSNTIITMYSLFGFTDMAKKVFSAMGNKDLVTWNSLISGYIYNNEVEAAYEVFERMPEKDLISWIAMIRGFATDGRIGKAVELFDTLTEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLSASASLVALNEGLQIHSHVLKMNLEYDISIQNSLISFYAKCGNVTDAYKIFIDVVELNVVSYNSVINGFAQNGFAEKALNMYKTMQSEGLEPNRVTFLAVLSACTHAGLVEEGWNLFGTMKLRYQVETDADHYACMVDLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHQRLDLAKLAAQHITELEPANATPYVVLSNMYSASGQKIEGDLVRKTKNLKGIKKSPGCSWITIKDKLPVNVIILLVDRREPQLQPDAAAMKTSLQPPPNLRQTRVEPPSWPADSKGVAMDVIISIAAKIAEIMVAPIGRQFCYILYYKGNLKKMKTNVQKLEGIKNSVQHTVDEARRNGEEIENIVLNWLKKVDNTFSEANKLIDTEDVAKSQRSMQNFPNLCTRYQLSRKIRKMMQKISEVIAEGKFDRISYRASLQVTITPFGRGYEALHSRTSMLNEIMLALKDPNIFIIGVYGMGGVGKTTLVKELAWQAENDESFSAVVMATITGSPDVIEIQGQIADALDLKFNKETKEGRARELLERISKEKSILVVLDDIWSRLELTELGVPFGNYHKGCKVVVTSRDQNLLSCEFGTQREFRLEVLNEEDSWQLFKKMAGDGVQDFNIKPIAVEVARRCAGFPLLIVTVAKALRKKNIFDWKSTLNELKRFDQEGLHKKIYSALELSYNCLESDELKSLFLFIGSFGLDYLHTGELFSSYWGMGLYRHSHTLTDARTRYYKLINDLKACSLLLESEAELIRIHDVVRDVAKSIASRTRPTYGVQRFALIKPWPEIDQLQKCHQISLHWSYIYNLPEKMECPELKILILENIGEYLKISDDFFSGMRELQVVSLYGMMFAPSPPPSLCILTKIQTLELAGCVLEDISMVKELKSLEILSLERSDIKELPKEIGQLTKLRMLNLANCSRLRFIPENLISSLTCLEELYMGNCFIQWNVKGRKDQSNNASLDELRSLSRLTSLDIMIQDASVCPKDFQVFAKLERYNIFVSDMWKWSLEWSGCASESSRILKLADSRSSNILLDHGINFLLNSAEDMCLAKIQCVRNVLYELNREGFPQLKHLQIQDSTELKHIINSIEWVHPYPALPNLESLVLQNLFNLEEICHGPTPIQSFTKLKSFEVIGCDKLKNLLWYPLVRNLPQLLEIKISDCKMITEIIAEQTYDADKEIDKIMFHKLRSIVLENLPSLISFCSVSLTVDIKRCGENYQGTQCLPVALMDEKVVMPHLELLKLSKINSRKLWDDKLSGHSCIQNLRSLTIDKCGSIVYAFSSSMARELVNLQHLEISNCQMLEEIIVSDGKFDNLPLSQKPLYNDEVIFPNLETLVISHMEHLKSIWHNQLATKSLCKLKQLKIEFCNEISNVIPSYVLNKLQNLEIVTIDNCHTLEVVFETQCLKADGGRQTRLEMQLRTLSLKHLPMLKHIWSGNPNESFMFQNLCLLNVTECKSLIHVFPLSVAKELQHLQELYIEKCGIEIIVAQDEMVDRFPIFIFPELTSLSFQDLTELRSFYNGLHTLDCPVLRDVDVLHCDKLELFKPMSLNCRDNVPVDTLPLLSIEKVVPNIRELILSCKDVSMLRNGQLNDELIYAVKSLCLRCFHDESVKFPSGFLQRFINLENLKLTCSSFSEIFSSGSVFTGHYKTSMKLRSLVLSNLHNLEFICEVKSEVQPIIQNMENLVVYRCSRLKNIVPSSVLFENLEHLQVSDCAGLEIIVKSSTAASLQKLTKLCIDDCEKMEEIVASDDENDASELDFMKLEYLRLSNLPMLRSFCKGRHCFKFPQLQKLFVVDCPMMETFSPGVLNAPKLIAVHVNEQDEWHWNGDINTTIRKFVAKTNSKDD*