AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523980 MtrunA17_Chr3g0145171 95.198 354 16 1 5 358 2 354 0.0 698
Msa0523980 MtrunA17_Chr8g0370711 76.136 352 83 1 7 358 4 354 0.0 572
Msa0523980 MtrunA17_Chr8g0370721 75.568 352 85 1 7 358 4 354 0.0 563
Msa0523980 MtrunA17_Chr3g0145181 67.622 349 105 5 14 358 9 353 6.56e-167 469
Msa0523980 MtrunA17_Chr3g0145201 69.551 312 89 4 51 358 679 988 2.42e-147 441
Msa0523980 MtrunA17_Chr4g0064781 51.453 344 156 5 16 358 15 348 6.45e-122 355
Msa0523980 MtrunA17_Chr3g0087031 41.441 333 188 4 13 343 19 346 1.60e-86 265
Msa0523980 MtrunA17_Chr2g0296371 39.776 357 202 7 8 358 7 356 2.13e-80 249
Msa0523980 MtrunA17_Chr5g0423251 38.372 344 203 4 17 358 12 348 1.61e-79 247
Msa0523980 MtrunA17_Chr2g0314401 37.500 344 208 3 17 358 16 354 2.61e-79 246
Msa0523980 MtrunA17_Chr2g0314391 39.535 344 201 3 17 358 35 373 7.67e-79 246
Msa0523980 MtrunA17_Chr7g0239111 40.129 309 175 5 30 336 32 332 8.59e-78 243
Msa0523980 MtrunA17_Chr5g0423191 40.523 306 177 3 55 358 46 348 1.07e-77 242
Msa0523980 MtrunA17_Chr5g0420981 38.889 306 183 3 55 358 52 355 2.20e-77 242
Msa0523980 MtrunA17_Chr5g0421041 36.047 344 209 4 17 358 12 346 1.11e-76 240
Msa0523980 MtrunA17_Chr2g0314381 38.554 332 194 5 17 346 41 364 2.05e-76 240
Msa0523980 MtrunA17_Chr5g0423221 39.016 305 182 2 56 358 71 373 2.30e-76 240
Msa0523980 MtrunA17_Chr8g0365241 38.235 306 185 3 55 358 56 359 9.08e-76 238
Msa0523980 MtrunA17_Chr8g0375671 40.000 300 176 3 54 351 50 347 1.79e-75 237
Msa0523980 MtrunA17_Chr7g0239101 38.206 301 177 4 56 355 55 347 1.75e-73 232
Msa0523980 MtrunA17_Chr5g0421011 38.235 306 184 3 55 358 46 348 3.01e-73 231
Msa0523980 MtrunA17_Chr8g0375601 39.590 293 173 3 55 346 47 336 8.48e-73 230
Msa0523980 MtrunA17_Chr7g0239121 35.329 334 203 7 30 358 28 353 9.32e-73 230
Msa0523980 MtrunA17_Chr5g0423201 35.211 355 220 5 7 358 2 349 9.48e-73 230
Msa0523980 MtrunA17_Chr5g0421101 37.377 305 186 3 56 358 47 348 1.67e-72 229
Msa0523980 MtrunA17_Chr8g0375701 40.129 309 171 5 56 358 55 355 4.66e-72 228
Msa0523980 MtrunA17_Chr8g0375571 35.362 345 215 4 9 351 2 340 7.49e-72 228
Msa0523980 MtrunA17_Chr1g0162191 39.583 288 172 2 55 342 46 331 9.19e-72 227
Msa0523980 MtrunA17_Chr7g0239821 35.621 306 192 3 55 358 63 365 3.74e-70 223
Msa0523980 MtrunA17_Chr7g0242551 37.809 283 172 2 54 332 52 334 3.25e-69 221
Msa0523980 MtrunA17_Chr5g0420951 36.570 309 192 3 52 358 49 355 5.21e-69 220
Msa0523980 MtrunA17_Chr8g0375681 40.590 271 158 2 90 358 16 285 5.64e-68 215
Msa0523980 MtrunA17_Chr5g0420941 36.103 349 212 5 13 358 6 346 6.08e-68 217
Msa0523980 MtrunA17_Chr7g0232161 41.975 243 138 2 51 293 55 294 1.28e-67 216
Msa0523980 MtrunA17_Chr4g0006371 36.207 290 181 2 50 335 56 345 1.91e-67 216
Msa0523980 MtrunA17_Chr5g0420901 34.000 350 220 5 12 358 6 347 2.20e-67 216
Msa0523980 MtrunA17_Chr5g0421091 36.656 311 193 2 50 358 39 347 2.90e-67 216
Msa0523980 MtrunA17_Chr7g0239071 39.130 276 161 4 87 358 29 301 4.13e-67 214
Msa0523980 MtrunA17_Chr5g0437181 37.234 282 172 3 55 332 48 328 1.02e-64 209
Msa0523980 MtrunA17_Chr4g0064771 43.191 257 94 1 94 350 1 205 1.40e-64 204
Msa0523980 MtrunA17_Chr3g0113641 36.014 286 180 2 50 332 44 329 2.43e-64 208
Msa0523980 MtrunA17_Chr5g0424201 33.030 330 210 6 10 336 1 322 3.71e-64 207
Msa0523980 MtrunA17_Chr5g0398291 34.139 331 203 8 15 334 5 331 4.95e-62 202
Msa0523980 MtrunA17_Chr3g0128001 36.610 295 179 5 55 348 37 324 3.95e-61 199
Msa0523980 MtrunA17_Chr5g0420721 39.113 248 148 2 113 358 4 250 2.24e-60 195
Msa0523980 MtrunA17_Chr5g0423211 34.091 308 194 5 56 358 47 350 2.40e-59 195
Msa0523980 MtrunA17_Chr3g0114861 34.409 279 176 5 74 348 53 328 4.32e-58 191
Msa0523980 MtrunA17_Chr2g0314371 35.737 319 167 7 17 308 16 323 2.05e-57 189
Msa0523980 MtrunA17_Chr5g0424211 34.520 281 174 5 54 329 40 315 2.49e-56 187
Msa0523980 MtrunA17_Chr3g0109041 35.370 311 187 8 56 355 42 349 7.91e-56 186
Msa0523980 MtrunA17_Chr8g0345831 34.237 295 188 6 56 349 42 331 1.17e-54 182
Msa0523980 MtrunA17_Chr1g0179801 34.653 303 181 7 51 346 61 353 1.30e-54 183
Msa0523980 MtrunA17_Chr7g0239091 34.967 306 184 5 55 358 159 451 1.57e-53 182
Msa0523980 MtrunA17_Chr6g0455481 34.286 315 188 8 44 351 30 332 4.98e-53 178
Msa0523980 MtrunA17_Chr2g0332191 34.868 304 177 9 56 349 52 344 6.83e-53 179
Msa0523980 MtrunA17_Chr5g0412671 35.526 304 187 7 56 353 38 338 3.53e-52 176
Msa0523980 MtrunA17_Chr5g0405411 32.099 324 209 7 22 342 9 324 1.35e-51 175
Msa0523980 MtrunA17_Chr3g0102041 30.032 313 209 6 26 335 13 318 1.53e-51 175
Msa0523980 MtrunA17_Chr8g0371931 33.103 290 187 6 56 342 39 324 1.79e-51 175
Msa0523980 MtrunA17_Chr2g0289341 32.566 304 190 8 55 352 3 297 2.02e-51 173
Msa0523980 MtrunA17_Chr5g0412651 34.967 306 186 8 56 353 38 338 4.45e-51 173
Msa0523980 MtrunA17_Chr7g0265221 32.581 310 186 7 50 346 61 360 1.88e-50 172
Msa0523980 MtrunA17_Chr4g0045471 35.880 301 170 9 56 336 26 323 3.51e-50 171
Msa0523980 MtrunA17_Chr3g0114871 36.325 234 139 5 52 281 38 265 7.97e-50 168
Msa0523980 MtrunA17_Chr5g0426891 34.694 294 177 8 56 341 39 325 1.05e-49 169
Msa0523980 MtrunA17_Chr5g0412681 33.660 306 188 6 56 356 33 328 3.99e-49 168
Msa0523980 MtrunA17_Chr8g0371921 32.069 290 190 6 56 342 39 324 2.11e-48 167
Msa0523980 MtrunA17_Chr3g0125201 31.884 276 176 3 54 325 1 268 6.47e-48 164
Msa0523980 MtrunA17_Chr4g0045441 36.120 299 167 9 56 334 26 320 9.59e-48 165
Msa0523980 MtrunA17_Chr3g0126741 32.667 300 188 9 56 350 59 349 2.10e-47 164
Msa0523980 MtrunA17_Chr4g0045451 35.548 301 170 9 56 336 26 322 1.26e-46 162
Msa0523980 MtrunA17_Chr1g0162321 33.333 303 174 8 55 334 68 365 1.72e-46 162
Msa0523980 MtrunA17_Chr3g0121141 30.464 302 197 7 55 352 3 295 2.67e-46 160
Msa0523980 MtrunA17_Chr1g0162351 33.663 303 173 8 55 334 68 365 2.72e-46 162
Msa0523980 MtrunA17_Chr1g0162361 35.374 294 167 8 56 334 27 312 1.38e-45 159
Msa0523980 MtrunA17_Chr7g0250511 29.643 280 191 5 56 333 49 324 4.20e-45 158
Msa0523980 MtrunA17_Chr1g0184161 30.508 295 197 7 56 348 38 326 5.83e-44 154
Msa0523980 MtrunA17_Chr1g0184111 33.221 298 186 9 56 348 37 326 6.50e-44 154
Msa0523980 MtrunA17_Chr7g0220011 33.803 284 175 6 56 335 39 313 8.51e-44 154
Msa0523980 MtrunA17_Chr1g0184121 32.215 298 189 8 56 348 37 326 1.00e-43 154
Msa0523980 MtrunA17_Chr4g0050031 30.868 311 201 7 56 358 62 366 2.32e-43 154
Msa0523980 MtrunA17_Chr6g0474391 29.814 322 197 7 53 355 61 372 8.28e-43 152
Msa0523980 MtrunA17_Chr8g0351101 30.351 313 204 7 54 355 52 361 1.35e-42 152
Msa0523980 MtrunA17_Chr5g0439011 30.182 275 180 6 54 325 3 268 1.71e-42 150
Msa0523980 MtrunA17_Chr1g0187831 29.167 312 207 8 51 354 65 370 1.75e-42 152
Msa0523980 MtrunA17_Chr1g0204181 30.159 315 205 7 53 355 56 367 6.33e-42 150
Msa0523980 MtrunA17_Chr1g0184151 29.492 295 200 7 56 348 38 326 7.83e-42 149
Msa0523980 MtrunA17_Chr8g0354261 31.741 293 184 7 50 333 62 347 1.02e-41 149
Msa0523980 MtrunA17_Chr3g0125421 31.511 311 191 8 30 328 17 317 3.64e-41 147
Msa0523980 MtrunA17_Chr2g0311921 30.233 301 190 7 56 347 54 343 9.79e-41 146
Msa0523980 MtrunA17_Chr7g0265351 32.390 318 199 10 47 358 30 337 1.02e-40 146
Msa0523980 MtrunA17_Chr8g0336781 32.000 300 189 9 56 348 95 386 1.28e-40 147
Msa0523980 MtrunA17_Chr4g0045431 34.448 299 172 9 56 334 26 320 2.04e-40 145
Msa0523980 MtrunA17_Chr2g0311741 31.596 307 192 8 50 349 21 316 2.50e-40 144
Msa0523980 MtrunA17_Chr8g0336761 30.903 288 179 7 56 333 60 337 5.76e-40 144
Msa0523980 MtrunA17_Chr2g0311681 32.168 286 182 6 50 331 57 334 7.24e-40 144
Msa0523980 MtrunA17_Chr8g0354241 30.000 320 206 8 50 358 62 374 1.12e-39 144
Msa0523980 MtrunA17_Chr8g0336751 31.410 312 201 7 54 358 92 397 1.42e-39 144
Msa0523980 MtrunA17_Chr2g0311701 31.475 305 192 7 50 343 63 361 1.47e-39 144
Msa0523980 MtrunA17_Chr2g0319491 30.877 285 171 9 56 333 33 298 1.94e-39 142
Msa0523980 MtrunA17_Chr4g0045411 30.976 297 182 8 56 335 30 320 2.03e-39 143
Msa0523980 MtrunA17_Chr2g0311711 32.414 290 184 7 50 333 61 344 2.34e-39 143
Msa0523980 MtrunA17_Chr8g0336851 29.524 315 200 8 56 358 60 364 2.83e-39 142
Msa0523980 MtrunA17_Chr2g0311631 30.255 314 201 8 56 358 55 361 3.07e-39 142
Msa0523980 MtrunA17_Chr1g0184101 31.894 301 193 7 53 346 29 324 4.10e-39 142
Msa0523980 MtrunA17_Chr3g0093761 30.946 349 225 8 14 358 17 353 4.86e-39 142
Msa0523980 MtrunA17_Chr7g0220001 31.343 268 178 5 84 349 65 328 1.04e-38 140
Msa0523980 MtrunA17_Chr2g0311691 31.615 291 180 7 54 333 61 343 1.30e-38 141
Msa0523980 MtrunA17_Chr2g0311761 33.205 259 158 5 56 308 68 317 2.29e-38 140
Msa0523980 MtrunA17_Chr7g0235951 29.283 321 203 8 52 358 63 373 2.43e-38 140
Msa0523980 MtrunA17_Chr1g0187821 29.180 305 195 8 50 343 61 355 2.60e-38 140
Msa0523980 MtrunA17_Chr2g0311831 31.359 287 178 7 56 333 68 344 6.66e-38 139
Msa0523980 MtrunA17_Chr8g0348081 30.233 301 187 10 56 344 60 349 6.77e-38 139
Msa0523980 MtrunA17_Chr4g0045461 33.779 299 177 9 56 336 26 321 1.14e-37 139
Msa0523980 MtrunA17_Chr6g0488511 29.348 276 181 5 54 324 1 267 2.05e-37 136
Msa0523980 MtrunA17_Chr3g0093741 31.169 308 198 8 56 358 56 354 2.27e-37 137
Msa0523980 MtrunA17_Chr4g0066121 30.293 307 191 9 56 351 60 354 4.54e-37 137
Msa0523980 MtrunA17_Chr5g0420881 42.361 144 81 1 217 358 1 144 9.41e-37 130
Msa0523980 MtrunA17_Chr8g0336861 29.747 316 200 9 56 358 60 366 1.01e-36 136
Msa0523980 MtrunA17_Chr3g0093751 32.143 308 195 8 56 358 56 354 1.12e-36 135
Msa0523980 MtrunA17_Chr1g0191201 30.000 300 189 7 44 328 41 334 1.53e-36 135
Msa0523980 MtrunA17_Chr1g0148771 32.841 271 163 7 56 324 63 316 3.23e-36 134
Msa0523980 MtrunA17_Chr8g0358941 31.164 292 175 10 56 333 27 306 3.48e-36 134
Msa0523980 MtrunA17_Chr1g0167961 29.747 316 197 10 56 358 69 372 3.69e-36 134
Msa0523980 MtrunA17_Chr8g0336631 29.412 289 183 7 56 333 60 338 7.77e-36 134
Msa0523980 MtrunA17_Chr1g0187811 28.767 292 193 7 50 333 182 466 1.14e-35 135
Msa0523980 MtrunA17_Chr8g0364471 27.273 308 209 8 50 349 61 361 1.27e-35 133
Msa0523980 MtrunA17_Chr3g0130391 29.393 313 204 8 50 351 60 366 1.41e-35 133
Msa0523980 MtrunA17_Chr7g0225881 30.492 305 191 11 49 342 60 354 2.51e-35 132
Msa0523980 MtrunA17_Chr8g0384461 27.414 321 212 8 22 332 19 328 3.23e-35 132
Msa0523980 MtrunA17_Chr1g0184241 29.097 299 196 8 50 342 63 351 3.94e-35 132
Msa0523980 MtrunA17_Chr4g0053251 30.070 286 178 8 56 321 8 291 2.01e-34 129
Msa0523980 MtrunA17_Chr7g0266651 30.345 290 189 7 50 333 53 335 2.32e-34 129
Msa0523980 MtrunA17_Chr6g0472861 28.571 294 193 9 50 335 64 348 6.70e-34 129
Msa0523980 MtrunA17_Chr7g0235981 29.348 276 181 5 91 358 58 327 7.55e-34 127
Msa0523980 MtrunA17_Chr1g0167911 30.116 259 164 7 56 308 54 301 8.61e-34 128
Msa0523980 MtrunA17_Chr4g0055591 28.333 300 198 7 56 349 61 349 8.70e-34 128
Msa0523980 MtrunA17_Chr2g0311861 29.545 308 179 9 56 355 64 341 1.27e-33 127
Msa0523980 MtrunA17_Chr1g0161111 32.333 300 190 8 56 350 132 423 3.89e-33 127
Msa0523980 MtrunA17_Chr1g0161041 31.126 302 191 9 56 350 96 387 6.18e-33 126
Msa0523980 MtrunA17_Chr8g0384481 29.154 319 207 9 50 358 53 362 8.05e-33 125
Msa0523980 MtrunA17_Chr1g0161081 31.000 300 194 8 56 350 73 364 8.35e-33 125
Msa0523980 MtrunA17_Chr4g0011311 30.588 255 166 6 50 302 61 306 1.18e-32 124
Msa0523980 MtrunA17_Chr7g0236011 30.769 312 193 8 50 349 61 361 2.53e-32 124
Msa0523980 MtrunA17_Chr2g0313111 29.787 282 178 9 56 330 28 296 1.19e-31 121
Msa0523980 MtrunA17_Chr7g0247991 28.115 313 202 8 50 350 61 362 2.79e-31 121
Msa0523980 MtrunA17_Chr2g0285931 28.523 298 189 10 49 333 20 306 9.01e-31 119
Msa0523980 MtrunA17_Chr4g0004061 30.392 306 193 12 56 351 9 304 1.28e-30 118
Msa0523980 MtrunA17_Chr8g0335411 28.438 320 211 9 50 358 61 373 3.66e-30 118
Msa0523980 MtrunA17_Chr5g0394071 36.313 179 98 5 174 351 5 168 4.34e-30 113
Msa0523980 MtrunA17_Chr1g0167951 28.897 263 170 6 52 308 49 300 4.82e-30 117
Msa0523980 MtrunA17_Chr3g0092531 30.897 301 183 12 56 348 6 289 5.22e-29 114
Msa0523980 MtrunA17_Chr4g0075471 40.517 116 69 0 209 324 21 136 1.15e-28 109
Msa0523980 MtrunA17_Chr3g0126761 34.503 171 108 4 171 340 44 211 1.60e-28 110
Msa0523980 MtrunA17_Chr7g0233661 38.562 153 81 3 199 351 3 142 4.63e-28 107
Msa0523980 MtrunA17_Chr4g0068891 29.276 304 181 11 45 334 12 295 7.06e-28 111
Msa0523980 MtrunA17_Chr1g0170631 32.642 193 122 5 171 358 3 192 1.22e-27 107
Msa0523980 MtrunA17_Chr3g0138351 30.195 308 193 13 52 344 3 303 1.96e-27 110
Msa0523980 MtrunA17_Chr4g0066991 27.508 309 183 9 52 349 63 341 5.67e-27 109
Msa0523980 MtrunA17_Chr8g0375661 40.833 120 69 1 54 171 50 169 8.11e-27 104
Msa0523980 MtrunA17_Chr8g0375641 41.667 120 68 1 54 171 50 169 9.55e-27 104
Msa0523980 MtrunA17_Chr4g0009541 28.667 300 204 9 53 345 4 300 2.09e-26 107
Msa0523980 MtrunA17_Chr1g0167931 27.152 302 161 9 56 348 54 305 2.44e-26 107
Msa0523980 MtrunA17_Chr6g0486831 30.195 308 183 12 57 335 11 315 3.45e-26 107
Msa0523980 MtrunA17_Chr8g0362741 30.472 233 141 6 50 281 61 273 5.50e-26 105
Msa0523980 MtrunA17_Chr8g0348951 29.514 288 183 10 56 334 10 286 7.84e-26 105
Msa0523980 MtrunA17_Chr3g0105281 28.571 266 163 6 56 311 34 282 3.40e-25 103
Msa0523980 MtrunA17_Chr4g0004071 28.754 313 204 12 48 351 1 303 4.85e-25 103
Msa0523980 MtrunA17_Chr4g0055911 28.000 325 210 13 48 356 1 317 6.51e-24 100
Msa0523980 MtrunA17_Chr7g0256741 27.273 308 196 11 56 350 10 302 1.54e-23 99.4
Msa0523980 MtrunA17_Chr4g0009561 27.885 312 210 9 51 351 2 309 2.15e-23 99.0
Msa0523980 MtrunA17_Chr4g0037611 38.843 121 71 3 192 311 12 130 8.81e-23 94.0
Msa0523980 MtrunA17_Chr7g0247741 27.974 311 201 12 50 351 5 301 1.59e-22 96.7
Msa0523980 MtrunA17_Chr1g0158011 28.514 249 153 9 102 344 10 239 9.54e-22 93.2
Msa0523980 MtrunA17_Chr4g0052251 25.769 260 178 10 79 328 45 299 2.18e-21 93.6
Msa0523980 MtrunA17_Chr4g0055871 27.152 302 197 11 48 337 1 291 7.98e-21 91.7
Msa0523980 MtrunA17_Chr1g0194321 25.503 298 193 9 56 334 20 307 1.62e-20 91.3
Msa0523980 MtrunA17_Chr8g0389941 28.082 292 186 11 77 348 51 338 8.11e-20 89.4
Msa0523980 MtrunA17_Chr8g0336801 31.126 151 98 3 213 358 7 156 1.16e-19 84.7
Msa0523980 MtrunA17_Chr8g0364171 36.937 111 68 2 171 281 18 126 2.80e-19 83.2
Msa0523980 MtrunA17_Chr5g0407781 27.208 283 186 6 56 334 5 271 3.04e-19 87.0
Msa0523980 MtrunA17_Chr8g0375581 43.678 87 46 1 191 277 2 85 4.57e-19 80.9
Msa0523980 MtrunA17_Chr8g0375591 37.879 132 77 2 9 138 2 130 9.47e-19 81.6
Msa0523980 MtrunA17_Chr2g0319521 34.513 113 72 2 169 281 14 124 2.15e-18 80.9
Msa0523980 MtrunA17_Chr5g0420891 30.864 162 104 3 11 171 5 159 2.34e-18 81.6
Msa0523980 MtrunA17_Chr3g0092581 36.970 165 91 8 187 348 7 161 2.47e-18 82.0
Msa0523980 MtrunA17_Chr1g0158021 30.131 229 141 8 52 273 45 261 6.21e-18 82.4
Msa0523980 MtrunA17_Chr2g0293931 30.857 175 106 6 172 334 8 179 8.47e-17 78.2
Msa0523980 MtrunA17_Chr8g0336871 30.303 165 102 5 183 342 2 158 1.72e-16 76.6
Msa0523980 MtrunA17_Chr1g0148781 29.688 192 127 7 162 349 121 308 5.01e-16 78.2
Msa0523980 MtrunA17_Chr8g0336831 27.513 189 128 5 56 240 60 243 1.91e-15 75.5
Msa0523980 MtrunA17_Chr1g0158031 29.114 158 100 5 181 332 1 152 1.20e-14 71.6
Msa0523980 MtrunA17_Chr7g0219991 36.893 103 63 1 174 276 251 351 3.81e-14 72.8
Msa0523980 MtrunA17_Chr2g0311611 47.222 72 30 2 217 281 1 71 4.36e-14 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523980 AT5G20400.1 55.233 344 151 3 16 358 7 348 2.05e-136 392
Msa0523980 AT1G49390.1 53.488 344 157 3 16 358 7 348 2.24e-135 390
Msa0523980 AT5G20550.1 57.980 307 127 2 54 358 43 349 9.09e-132 380
Msa0523980 AT5G54000.2 51.297 347 161 5 16 358 7 349 3.32e-126 366
Msa0523980 AT1G49390.2 57.993 269 113 0 90 358 1 269 1.70e-119 346
Msa0523980 AT5G54000.1 54.647 269 122 0 90 358 1 269 1.60e-111 326
Msa0523980 AT3G21420.1 43.966 348 186 6 18 358 17 362 2.63e-87 268
Msa0523980 AT1G17020.1 36.011 361 222 5 3 358 2 358 3.69e-77 241
Msa0523980 AT4G25300.1 39.677 310 177 3 55 358 51 356 3.36e-76 239
Msa0523980 AT1G78550.1 39.557 316 188 2 45 358 42 356 2.99e-75 236
Msa0523980 AT2G38240.1 36.232 345 207 5 17 355 11 348 9.68e-75 235
Msa0523980 AT1G17010.1 37.377 305 189 1 56 358 54 358 8.79e-73 230
Msa0523980 AT4G25310.1 38.746 351 194 7 17 358 15 353 3.19e-72 229
Msa0523980 AT5G05600.1 36.688 308 186 4 55 355 61 366 7.86e-69 221
Msa0523980 AT1G78550.2 39.286 280 165 3 81 358 2 278 1.32e-65 209
Msa0523980 AT3G11180.2 37.370 289 176 3 49 335 88 373 1.63e-64 210
Msa0523980 AT3G11180.1 37.370 289 176 3 49 335 88 373 1.70e-64 210
Msa0523980 AT3G55970.1 35.762 302 186 5 56 351 52 351 8.63e-63 204
Msa0523980 AT5G08640.2 36.396 283 170 5 56 334 43 319 2.03e-60 197
Msa0523980 AT5G08640.1 36.396 283 170 5 56 334 43 319 2.03e-60 197
Msa0523980 AT4G22880.1 34.146 287 181 5 55 334 46 331 1.83e-59 196
Msa0523980 AT4G22880.2 34.146 287 181 5 55 334 46 331 1.83e-59 196
Msa0523980 AT4G22880.3 34.146 287 181 5 55 334 46 331 1.83e-59 196
Msa0523980 AT4G16330.2 36.156 307 177 8 56 355 67 361 9.16e-58 192
Msa0523980 AT4G10500.1 35.495 293 179 8 56 343 44 331 7.92e-56 186
Msa0523980 AT2G36690.2 33.531 337 210 8 16 348 19 345 5.26e-55 184
Msa0523980 AT2G36690.1 33.531 337 210 8 16 348 19 345 5.26e-55 184
Msa0523980 AT3G19010.1 37.377 305 171 9 47 336 20 319 9.07e-55 183
Msa0523980 AT3G19010.4 37.377 305 171 9 47 336 20 319 9.07e-55 183
Msa0523980 AT5G24530.1 33.634 333 187 9 37 348 4 323 4.60e-54 181
Msa0523980 AT5G05600.2 36.522 230 143 2 55 281 61 290 9.93e-53 176
Msa0523980 AT4G25310.2 35.159 347 184 8 17 358 15 325 2.38e-52 176
Msa0523980 AT3G60290.1 35.135 296 178 7 44 332 38 326 2.54e-52 177
Msa0523980 AT2G44800.1 35.125 279 169 6 52 325 48 319 4.84e-51 174
Msa0523980 AT1G55290.1 34.713 314 188 9 52 358 58 361 2.75e-50 172
Msa0523980 AT4G16330.1 36.782 261 152 7 102 355 1 255 2.66e-49 166
Msa0523980 AT1G62380.1 31.148 305 198 6 51 352 2 297 3.56e-49 168
Msa0523980 AT3G13610.1 34.069 317 190 10 50 358 56 361 4.13e-49 169
Msa0523980 AT4G10490.1 33.333 297 184 9 56 348 42 328 7.72e-49 168
Msa0523980 AT1G12010.1 31.511 311 200 7 51 357 2 303 1.27e-48 166
Msa0523980 AT5G07200.1 34.035 285 176 5 54 328 56 338 4.98e-48 167
Msa0523980 AT1G15550.1 33.333 312 192 7 30 335 31 332 5.74e-48 166
Msa0523980 AT5G63590.1 32.660 297 180 7 52 336 10 298 8.93e-48 164
Msa0523980 AT3G55970.2 34.632 231 146 3 56 281 52 282 2.47e-47 162
Msa0523980 AT5G63600.1 30.137 292 192 6 52 340 29 311 2.00e-46 161
Msa0523980 AT3G19010.3 34.426 305 150 9 47 336 20 289 2.52e-46 160
Msa0523980 AT1G05010.1 33.333 273 169 6 56 324 4 267 3.34e-46 160
Msa0523980 AT3G51240.1 31.959 291 189 8 56 342 38 323 4.56e-46 161
Msa0523980 AT1G60980.1 32.979 282 175 5 54 323 55 334 7.16e-46 161
Msa0523980 AT1G77330.1 33.574 277 162 7 54 320 1 265 1.38e-45 158
Msa0523980 AT5G63600.2 30.034 293 192 7 52 340 29 312 2.10e-45 158
Msa0523980 AT5G07480.1 30.031 323 194 9 56 358 44 354 6.43e-45 158
Msa0523980 AT1G44090.1 31.949 313 202 6 47 351 54 363 1.00e-44 158
Msa0523980 AT3G19000.1 35.714 294 169 8 56 333 32 321 3.50e-44 155
Msa0523980 AT4G21200.1 31.475 305 184 7 29 318 3 297 3.00e-43 153
Msa0523980 AT5G63595.1 31.679 262 151 5 52 311 21 256 3.07e-43 151
Msa0523980 AT4G25420.1 31.206 282 184 4 53 326 58 337 4.23e-43 154
Msa0523980 AT5G51810.1 30.662 287 187 4 53 332 60 341 6.59e-42 150
Msa0523980 AT1G80340.1 31.098 328 202 9 30 348 28 340 2.20e-41 148
Msa0523980 AT3G19010.2 37.450 251 137 9 47 282 20 265 4.07e-41 146
Msa0523980 AT1G80330.1 29.355 310 197 10 56 353 49 348 5.55e-41 147
Msa0523980 AT1G06620.1 33.459 266 161 6 49 308 55 310 6.33e-41 147
Msa0523980 AT5G43450.1 32.576 264 162 6 50 308 55 307 1.08e-40 147
Msa0523980 AT5G43935.1 31.206 282 157 8 56 329 19 271 1.08e-40 145
Msa0523980 AT5G43440.1 29.338 317 203 8 53 358 59 365 4.26e-40 145
Msa0523980 AT5G63580.2 33.898 236 146 5 49 281 12 240 4.63e-40 142
Msa0523980 AT4G25300.2 38.462 195 110 3 170 358 72 262 5.56e-40 142
Msa0523980 AT5G63580.1 34.188 234 144 5 49 279 12 238 6.68e-40 142
Msa0523980 AT5G59530.1 30.094 319 207 8 50 358 52 364 2.05e-39 143
Msa0523980 AT1G78440.1 31.034 290 174 9 56 332 18 294 3.87e-39 142
Msa0523980 AT2G30830.1 32.069 290 183 8 51 333 49 331 1.29e-38 141
Msa0523980 AT3G51240.2 32.083 240 157 5 105 342 4 239 1.67e-38 139
Msa0523980 AT1G06645.1 30.945 307 190 10 49 342 66 363 8.82e-38 139
Msa0523980 AT5G59540.1 28.852 305 200 8 50 344 55 352 1.12e-37 139
Msa0523980 AT3G12900.1 28.758 306 202 10 59 357 59 355 2.31e-37 138
Msa0523980 AT1G04380.1 31.679 262 162 6 52 308 41 290 2.37e-37 137
Msa0523980 AT3G61400.1 31.560 282 180 7 69 342 79 355 2.48e-37 138
Msa0523980 AT1G06640.1 29.904 311 191 10 49 342 53 353 3.88e-36 135
Msa0523980 AT1G03410.2 31.525 295 183 9 49 333 50 335 1.50e-35 133
Msa0523980 AT5G12270.1 29.022 317 198 8 56 358 56 359 2.03e-35 132
Msa0523980 AT1G03410.1 31.525 295 183 9 49 333 87 372 2.52e-35 133
Msa0523980 AT3G19000.2 35.950 242 135 8 56 281 32 269 3.71e-35 130
Msa0523980 AT2G19590.1 29.470 302 190 10 47 342 2 286 1.00e-34 130
Msa0523980 AT2G30840.1 30.855 269 175 7 47 310 48 310 1.72e-34 130
Msa0523980 AT5G07480.2 32.287 223 137 6 147 358 26 245 1.82e-34 127
Msa0523980 AT1G04350.1 28.972 321 204 10 50 358 52 360 1.89e-34 130
Msa0523980 AT1G06620.2 32.773 238 144 6 49 280 55 282 2.81e-34 128
Msa0523980 AT1G06650.2 30.000 300 187 10 56 342 64 353 4.88e-34 129
Msa0523980 AT5G43450.2 31.780 236 145 6 50 280 55 279 1.08e-33 126
Msa0523980 AT5G43440.2 30.085 236 151 5 53 283 59 285 1.04e-32 124
Msa0523980 AT4G25420.2 30.380 237 155 4 53 281 58 292 7.16e-32 122
Msa0523980 AT3G49620.1 29.795 292 172 6 56 321 34 318 1.16e-31 122
Msa0523980 AT2G25450.1 28.767 292 195 7 49 333 48 333 1.42e-31 122
Msa0523980 AT4G21690.1 28.041 296 192 5 49 333 40 325 3.10e-31 121
Msa0523980 AT1G04380.2 30.802 237 147 6 52 283 41 265 6.03e-31 119
Msa0523980 AT3G50210.4 28.966 290 182 8 56 321 8 297 6.38e-31 120
Msa0523980 AT3G50210.1 28.966 290 182 8 56 321 8 297 6.38e-31 120
Msa0523980 AT3G50210.3 28.966 290 182 8 56 321 8 297 6.38e-31 120
Msa0523980 AT2G30840.3 30.112 269 171 8 47 310 48 304 9.91e-31 120
Msa0523980 AT1G03400.1 29.655 290 186 7 49 333 49 325 4.72e-30 118
Msa0523980 AT1G06640.3 31.250 240 144 7 49 277 53 282 8.83e-30 116
Msa0523980 AT5G51810.2 29.289 239 157 4 53 284 60 293 1.29e-29 115
Msa0523980 AT1G06640.2 30.603 232 144 6 56 280 64 285 1.69e-29 116
Msa0523980 AT3G61400.2 32.093 215 139 4 69 281 79 288 1.93e-29 115
Msa0523980 AT1G52820.1 29.412 323 211 10 41 357 1 312 2.81e-29 115
Msa0523980 AT5G59540.2 28.692 237 157 6 50 281 55 284 3.39e-29 114
Msa0523980 AT2G19590.2 30.153 262 161 9 87 342 26 271 3.56e-29 114
Msa0523980 AT3G49630.1 28.671 286 183 5 56 321 9 293 4.91e-29 115
Msa0523980 AT1G50960.1 27.407 270 184 6 52 317 36 297 7.99e-29 114
Msa0523980 AT3G49630.3 28.938 273 182 4 60 321 18 289 2.12e-28 113
Msa0523980 AT1G06650.1 30.252 238 149 7 56 286 64 291 5.76e-28 111
Msa0523980 AT1G30040.1 26.871 294 196 8 48 333 23 305 9.29e-28 111
Msa0523980 AT2G30840.2 28.992 238 159 6 47 280 48 279 4.78e-27 108
Msa0523980 AT3G46500.5 28.966 290 175 12 58 319 11 297 5.12e-26 106
Msa0523980 AT3G46500.7 29.412 272 171 11 58 311 11 279 7.11e-25 103
Msa0523980 AT1G03400.2 27.044 318 186 8 49 333 49 353 1.09e-24 103
Msa0523980 AT2G34555.1 28.070 285 185 10 56 332 27 299 2.99e-24 102
Msa0523980 AT1G14130.1 27.740 292 181 6 56 337 9 280 4.93e-24 100
Msa0523980 AT1G47990.1 29.293 297 178 12 53 333 12 292 2.04e-22 96.7
Msa0523980 AT1G14120.2 26.761 284 194 5 56 337 8 279 1.32e-21 94.4
Msa0523980 AT1G14120.1 26.761 284 194 5 56 337 8 279 1.32e-21 94.4
Msa0523980 AT1G14120.3 26.761 284 194 5 56 337 8 279 1.32e-21 94.4
Msa0523980 AT5G51310.1 29.642 307 175 15 54 336 3 292 2.47e-21 93.6
Msa0523980 AT3G47190.1 25.152 330 201 11 24 336 3 303 3.51e-21 93.2
Msa0523980 AT1G52800.1 25.402 311 198 10 56 350 10 302 8.74e-21 92.0
Msa0523980 AT4G03070.1 28.049 328 204 17 47 358 5 316 1.53e-20 91.3
Msa0523980 AT1G28030.1 26.433 314 214 10 50 353 7 313 4.61e-20 90.1
Msa0523980 AT5G58660.1 26.460 291 180 8 53 318 31 312 6.35e-20 90.1
Msa0523980 AT3G50210.2 29.878 164 110 2 163 321 52 215 1.86e-19 87.0
Msa0523980 AT1G02400.1 25.342 292 201 9 50 332 18 301 4.88e-19 87.0
Msa0523980 AT3G46490.1 26.370 292 187 11 48 314 1 289 5.43e-19 87.0
Msa0523980 AT3G46490.2 26.573 286 182 11 48 308 1 283 1.67e-18 85.5
Msa0523980 AT3G49630.2 30.000 160 110 2 163 321 62 220 2.63e-18 84.0
Msa0523980 AT4G16765.6 32.275 189 116 6 157 335 44 230 5.95e-18 82.8
Msa0523980 AT4G16765.1 32.275 189 116 6 157 335 44 230 5.95e-18 82.8
Msa0523980 AT4G16765.2 32.275 189 116 6 157 335 44 230 5.95e-18 82.8
Msa0523980 AT1G30040.2 25.207 242 162 8 48 281 23 253 1.33e-17 82.0
Msa0523980 AT4G16765.3 32.796 186 113 6 157 332 44 227 1.75e-17 81.3
Msa0523980 AT3G46500.10 28.986 207 122 9 136 319 19 223 3.50e-17 80.5
Msa0523980 AT3G46500.1 28.986 207 122 9 136 319 19 223 3.50e-17 80.5
Msa0523980 AT1G35190.1 28.929 280 177 9 77 336 29 306 4.69e-17 81.6
Msa0523980 AT4G23340.1 27.358 318 193 14 51 350 5 302 1.13e-16 80.5
Msa0523980 AT1G35190.2 27.957 279 158 10 77 336 29 283 2.37e-16 79.3
Msa0523980 AT3G46500.3 29.630 189 118 8 136 311 19 205 2.44e-16 77.8
Msa0523980 AT3G46500.4 31.902 163 92 6 174 319 1 161 8.73e-16 75.5
Msa0523980 AT3G46500.6 33.562 146 88 5 173 311 31 174 1.81e-15 74.3
Msa0523980 AT3G46500.8 33.562 146 88 5 173 311 31 174 1.81e-15 74.3
Msa0523980 AT4G22870.1 34.884 86 55 1 250 334 2 87 8.50e-14 67.4
Msa0523980 AT3G46480.1 30.172 232 127 11 106 316 37 254 1.57e-13 70.5
Msa0523980 AT4G16765.5 35.455 110 64 3 231 335 77 184 6.03e-13 67.4
Msa0523980 AT4G16765.4 33.099 142 84 5 157 288 44 184 4.01e-12 64.7
Msa0523980 AT3G46500.2 28.916 166 104 7 136 288 19 183 5.63e-12 64.3
Msa0523980 AT4G03050.2 32.031 128 82 5 227 351 271 396 6.19e-12 67.0
Msa0523980 AT4G03050.1 32.031 128 82 5 227 351 271 396 6.19e-12 67.0
Msa0523980 AT4G23340.2 33.813 139 86 4 217 350 47 184 1.03e-11 63.9
Msa0523980 AT1G02400.2 23.438 256 180 8 50 297 18 265 2.47e-11 63.9
Msa0523980 AT3G46500.9 25.871 201 112 9 136 319 19 199 3.67e-11 62.8
Msa0523980 AT4G22870.2 33.333 78 51 1 258 334 51 128 8.43e-11 60.1

Find 79 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCTTGGGGATTGTTTC+AGG 0.048302 3_4:+77435015 Msa0523980:CDS
TTATTATCATGTTCCTTTAA+AGG 0.158034 3_4:-77439443 None:intergenic
TTAATCTCTTGTTCTGAATC+TGG 0.210279 3_4:-77439132 None:intergenic
ACATAACTATGATTAAATTT+TGG 0.220701 3_4:-77439268 None:intergenic
AACAATATACTGAAAGTTTA+AGG 0.224571 3_4:+77438239 Msa0523980:CDS
TCATTGTAGATATAATTATT+TGG 0.229365 3_4:-77434860 None:intergenic
AATATTACCAACAGGGAAAA+AGG 0.234600 3_4:+77439232 Msa0523980:CDS
TCCACTCTGCTCTCTCTTCT+TGG 0.263003 3_4:+77435002 Msa0523980:CDS
AATTATATCTACAATGAATT+AGG 0.265397 3_4:+77434866 Msa0523980:CDS
CAGAAAATCAAAAGCTTGAT+TGG 0.289170 3_4:+77437765 Msa0523980:CDS
TTGAAATTCCTCTGATCTTC+CGG 0.295977 3_4:-77437815 None:intergenic
TAGTTATGTACAAGACTTCT+AGG 0.306590 3_4:+77439282 Msa0523980:three_prime_UTR
CCACTCTGCTCTCTCTTCTT+GGG 0.307569 3_4:+77435003 Msa0523980:CDS
CCTATGCCTGATCATGTTCT+AGG 0.310348 3_4:+77438385 Msa0523980:CDS
TTCACTGGTCTGTATAATAT+TGG 0.322104 3_4:-77439186 None:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.323173 3_4:-77438324 None:intergenic
GAATTTATACCTGAAATCAT+TGG 0.353550 3_4:-77437855 None:intergenic
ATCAGAGGAATTTCAAACTT+TGG 0.357694 3_4:+77437822 Msa0523980:CDS
ACGAGAGCATCAGGGATTAT+TGG 0.359276 3_4:-77438508 None:intergenic
ACATTAATCACGAGAGCATC+AGG 0.364504 3_4:-77438517 None:intergenic
CCAAACGGTATTGAAGGATA+TGG 0.374061 3_4:+77437725 Msa0523980:CDS
CTTCTAGGAACTTTGTGAAA+TGG 0.389068 3_4:+77439297 Msa0523980:three_prime_UTR
TAATCTCTTGTTCTGAATCT+GGG 0.407176 3_4:-77439131 None:intergenic
GATGGCAGAATCGGTGGGTT+CGG 0.415598 3_4:+77434772 Msa0523980:exon
AGTAGTGATAAATGAAGAAA+AGG 0.420128 3_4:+77439080 Msa0523980:CDS
CCATATCCTTCAATACCGTT+TGG 0.420764 3_4:-77437725 None:intergenic
TCGGCAGAGGTTGATATAAT+CGG 0.433374 3_4:+77434791 Msa0523980:CDS
AATTTATACCTGAAATCATT+GGG 0.433877 3_4:-77437854 None:intergenic
AGTTCCTGCTGTGCTGTAGA+TGG 0.445982 3_4:-77434971 None:intergenic
CACTCTGCTCTCTCTTCTTG+GGG 0.449462 3_4:+77435004 Msa0523980:CDS
TACAATGAATTAGGTGGTGT+TGG 0.450827 3_4:+77434875 Msa0523980:CDS
AGTTTGGCAATGTCAACAAC+TGG 0.457707 3_4:-77434941 None:intergenic
CTGCAAGATAAAGAGGTAGA+AGG 0.474206 3_4:+77438448 Msa0523980:CDS
GGAAGAGGATTGCTTCCTAA+AGG 0.484624 3_4:+77438309 Msa0523980:CDS
TTTATCACTACTCTGTGTAC+TGG 0.484624 3_4:-77439069 None:intergenic
TTCTCCATCTACAGCACAGC+AGG 0.485461 3_4:+77434967 Msa0523980:CDS
CATAGCAAAATCACTGAACT+TGG 0.489185 3_4:+77438288 Msa0523980:CDS
AGTATATCTTAAGGTACATC+CGG 0.491418 3_4:+77437796 Msa0523980:CDS
AGGGAGCCAAACGGTATTGA+AGG 0.498045 3_4:+77437719 Msa0523980:CDS
AGAATCGGTGGGTTCGGCAG+AGG 0.505359 3_4:+77434778 Msa0523980:CDS
GACTGATAGAGTATATCTTA+AGG 0.505600 3_4:+77437787 Msa0523980:CDS
CTACTCTGTGTACTGGACTC+TGG 0.522493 3_4:-77439062 None:intergenic
TTTACGCCTAGAACATGATC+AGG 0.523560 3_4:-77438391 None:intergenic
AAGTTTAAGGCAGTTATATG+AGG 0.523916 3_4:+77438252 Msa0523980:CDS
TGTAGATGGAGAAATGAGTT+TGG 0.524076 3_4:-77434957 None:intergenic
ATCAGTTCAAGAACTGTCGT+TGG 0.533223 3_4:+77434820 Msa0523980:CDS
GGCGTAAAGCCACATGCTGA+TGG 0.536648 3_4:+77438406 Msa0523980:CDS
GCAATTCTTTGAACTTCCAA+AGG 0.540464 3_4:+77437676 Msa0523980:CDS
GCTTGTCTCTTGACAAAGTG+AGG 0.546684 3_4:+77437642 Msa0523980:CDS
AAAATCACTGAACTTGGAAG+AGG 0.546943 3_4:+77438294 Msa0523980:CDS
TAGAAAGATGGCAGAATCGG+TGG 0.547145 3_4:+77434766 Msa0523980:exon
TAATGTTGGTGATCAAATAG+AGG 0.552527 3_4:+77438534 Msa0523980:CDS
ATTGTGAAAATTCTGAGCTA+TGG 0.555268 3_4:+77439354 Msa0523980:three_prime_UTR
TTGTAGATATAATTATTTGG+TGG 0.579722 3_4:-77434857 None:intergenic
CCGTCCACTAGTCTGTCGAC+TGG 0.584898 3_4:-77439156 None:intergenic
CAGTCGACAGACTAGTGGAC+GGG 0.592554 3_4:+77439157 Msa0523980:CDS
ACATGATCAGGCATAGGACA+TGG 0.597433 3_4:-77438379 None:intergenic
TATATCTACAATGAATTAGG+TGG 0.601026 3_4:+77434869 Msa0523980:CDS
AGAAAGATGGCAGAATCGGT+GGG 0.601789 3_4:+77434767 Msa0523980:exon
CTTGTCTCTTGACAAAGTGA+GGG 0.608187 3_4:+77437643 Msa0523980:CDS
GATGCTCTCGTGATTAATGT+TGG 0.610796 3_4:+77438520 Msa0523980:CDS
AAGTGCTAAAAGATAATCAG+TGG 0.615774 3_4:+77438476 Msa0523980:CDS
AAATATGCAAGGGAGCCAAA+CGG 0.617288 3_4:+77437710 Msa0523980:CDS
TGATAAATGAAGAAAAGGAA+AGG 0.617930 3_4:+77439085 Msa0523980:CDS
GAGACAAGCTTGTCATACCA+TGG 0.626742 3_4:-77437628 None:intergenic
GATTGCTTCCTAAAGGAATG+TGG 0.631118 3_4:+77438316 Msa0523980:CDS
AGGTACATCCGGAAGATCAG+AGG 0.633070 3_4:+77437807 Msa0523980:CDS
GTGATTTAGGCAATAAACCA+TGG 0.634072 3_4:+77437611 Msa0523980:intron
CCTAGAACATGATCAGGCAT+AGG 0.638733 3_4:-77438385 None:intergenic
GTTACACAGATAATGAGCAA+TGG 0.639099 3_4:+77439033 Msa0523980:intron
TAAACCAGTCGACAGACTAG+TGG 0.643978 3_4:+77439152 Msa0523980:CDS
CATTAATCACGAGAGCATCA+GGG 0.648254 3_4:-77438516 None:intergenic
CCCAAGAAGAGAGAGCAGAG+TGG 0.660002 3_4:-77435003 None:intergenic
CCAGTCGACAGACTAGTGGA+CGG 0.661367 3_4:+77439156 Msa0523980:CDS
ATAGATGATCCATCAGCATG+TGG 0.675560 3_4:-77438415 None:intergenic
ATATGAAGATCTGATTGTGA+AGG 0.677136 3_4:-77434917 None:intergenic
GATCAGGCATAGGACATGGA+GGG 0.679288 3_4:-77438375 None:intergenic
TGATCAGGCATAGGACATGG+AGG 0.683082 3_4:-77438376 None:intergenic
TGAACAATTTACATACAGAG+AGG 0.738395 3_4:-77434724 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAATTAAATTAATA+AGG - chr3_4:77435607-77435626 None:intergenic 0.0%
!! TAAATTAATAAGGTTAAAAT+TGG - chr3_4:77435597-77435616 None:intergenic 10.0%
!! AAATTATTATATGTATAATG+GGG + chr3_4:77435932-77435951 Msa0523980:intron 10.0%
!! TCATTGTAGATATAATTATT+TGG - chr3_4:77434863-77434882 None:intergenic 15.0%
!! AATTATATCTACAATGAATT+AGG + chr3_4:77434866-77434885 Msa0523980:CDS 15.0%
!!! ATTCTAAAACTTTATTTGAT+GGG - chr3_4:77435345-77435364 None:intergenic 15.0%
!!! TATTCTAAAACTTTATTTGA+TGG - chr3_4:77435346-77435365 None:intergenic 15.0%
!!! ATAAAGTACATTTATCATTT+TGG + chr3_4:77435855-77435874 Msa0523980:intron 15.0%
!!! TAAAGTACATTTATCATTTT+GGG + chr3_4:77435856-77435875 Msa0523980:intron 15.0%
!! TAAATATAAAATGACACAAA+AGG - chr3_4:77436059-77436078 None:intergenic 15.0%
!! TTTAATAATATTTGCAGATT+CGG - chr3_4:77436344-77436363 None:intergenic 15.0%
!! TTAAATCAATAAATCATAAC+AGG - chr3_4:77437408-77437427 None:intergenic 15.0%
!! TTGATTTAAATTAGAGAATA+CGG + chr3_4:77437419-77437438 Msa0523980:intron 15.0%
!! TTGAATGTAAATATTAGATA+TGG + chr3_4:77437496-77437515 Msa0523980:intron 15.0%
!! AAAGAATATTCATTGTTAAT+GGG - chr3_4:77437897-77437916 None:intergenic 15.0%
!! AAAAGAATATTCATTGTTAA+TGG - chr3_4:77437898-77437917 None:intergenic 15.0%
!!! ACATAACTATGATTAAATTT+TGG - chr3_4:77439271-77439290 None:intergenic 15.0%
!! TTGTAGATATAATTATTTGG+TGG - chr3_4:77434860-77434879 None:intergenic 20.0%
!! AAATAGAAAATATTAGCAGT+TGG - chr3_4:77435063-77435082 None:intergenic 20.0%
!!! AAAGTACATTTATCATTTTG+GGG + chr3_4:77435857-77435876 Msa0523980:intron 20.0%
!! CTGATTGAAATTAAAATGTT+TGG - chr3_4:77436107-77436126 None:intergenic 20.0%
!!! TTTTTTTTGGAGTTTGTTTT+AGG - chr3_4:77436488-77436507 None:intergenic 20.0%
!! TAAACAACAAACAAATCAAA+AGG + chr3_4:77436945-77436964 Msa0523980:intron 20.0%
!!! ACTCTCAAATAATTTTTTTC+TGG + chr3_4:77437543-77437562 Msa0523980:intron 20.0%
!!! AATTTTTTTCTGGTTCATAT+TGG + chr3_4:77437553-77437572 Msa0523980:intron 20.0%
!! CTAAATCACACAAAATAATT+AGG - chr3_4:77437600-77437619 None:intergenic 20.0%
!!! CTAATTATTTTGTGTGATTT+AGG + chr3_4:77437598-77437617 Msa0523980:intron 20.0%
!! AATTTATACCTGAAATCATT+GGG - chr3_4:77437857-77437876 None:intergenic 20.0%
!!! TACTTTATTTAATAACTCCA+CGG + chr3_4:77437938-77437957 Msa0523980:intron 20.0%
!! ACAAAAATAGTAGATTTGTA+GGG - chr3_4:77438021-77438040 None:intergenic 20.0%
!! AACAAAAATAGTAGATTTGT+AGG - chr3_4:77438022-77438041 None:intergenic 20.0%
!!! AACGTACAATTTTTTGTTAT+TGG + chr3_4:77438084-77438103 Msa0523980:intron 20.0%
!! TAGAGAAAATAATTGTGTAA+CGG - chr3_4:77438175-77438194 None:intergenic 20.0%
!! AACAATATACTGAAAGTTTA+AGG + chr3_4:77438239-77438258 Msa0523980:CDS 20.0%
!! GAAGATAAAAACAAAAAACA+CGG - chr3_4:77438622-77438641 None:intergenic 20.0%
!!! TTGTTATTTTCACTTTTTTG+TGG + chr3_4:77438743-77438762 Msa0523980:intron 20.0%
!! TATATCATAGATATAAGCTT+TGG - chr3_4:77438974-77438993 None:intergenic 20.0%
!! ATCTATGATATATAACTGAT+AGG + chr3_4:77438982-77439001 Msa0523980:intron 20.0%
!!! ATATTTTCAATATTACCAAC+AGG + chr3_4:77439224-77439243 Msa0523980:CDS 20.0%
!!! TATTTTCAATATTACCAACA+GGG + chr3_4:77439225-77439244 Msa0523980:CDS 20.0%
!!! CTTTAAAGGATTTATGTTTT+TGG - chr3_4:77439432-77439451 None:intergenic 20.0%
!! CAAAAACATAAATCCTTTAA+AGG + chr3_4:77439430-77439449 Msa0523980:three_prime_UTR 20.0%
!! TTATTATCATGTTCCTTTAA+AGG - chr3_4:77439446-77439465 None:intergenic 20.0%
! TATATCTACAATGAATTAGG+TGG + chr3_4:77434869-77434888 Msa0523980:CDS 25.0%
! ATACTATCTTCTAAGTTAAG+AGG - chr3_4:77435118-77435137 None:intergenic 25.0%
! TTAACTTAGAAGATAGTATC+AGG + chr3_4:77435119-77435138 Msa0523980:intron 25.0%
! ATCAGGATTGTAATTATGAT+CGG + chr3_4:77435136-77435155 Msa0523980:intron 25.0%
!!! TATTAAGTTTTGATGCAATC+AGG + chr3_4:77435317-77435336 Msa0523980:intron 25.0%
! TAATAAACATTGATCCTCTA+AGG + chr3_4:77435395-77435414 Msa0523980:intron 25.0%
! TTTAATAAACATCACGTTGA+TGG + chr3_4:77435629-77435648 Msa0523980:intron 25.0%
!!! GTCTTATATCCCTTTTTTTA+CGG + chr3_4:77435696-77435715 Msa0523980:intron 25.0%
!!! TCTTATATCCCTTTTTTTAC+GGG + chr3_4:77435697-77435716 Msa0523980:intron 25.0%
! AAAAATGTCCCGTAAAAAAA+GGG - chr3_4:77435708-77435727 None:intergenic 25.0%
! AAAAAATGTCCCGTAAAAAA+AGG - chr3_4:77435709-77435728 None:intergenic 25.0%
! CTCTAATACAACTATACTTA+GGG - chr3_4:77436245-77436264 None:intergenic 25.0%
! TCTCTAATACAACTATACTT+AGG - chr3_4:77436246-77436265 None:intergenic 25.0%
! GACAGATAAAATATACAAAG+TGG - chr3_4:77436302-77436321 None:intergenic 25.0%
! CGGAAAAAAAAAATCATAAC+AGG - chr3_4:77436324-77436343 None:intergenic 25.0%
!!! CAGTGCTTGTTTTTTTTTTT+TGG - chr3_4:77436501-77436520 None:intergenic 25.0%
! ACTATAATACCAAATTAGCA+GGG + chr3_4:77436770-77436789 Msa0523980:intron 25.0%
!!! AATCTTTGTTTGACTTGATT+TGG - chr3_4:77436828-77436847 None:intergenic 25.0%
! AATCAATAAATCATAACAGG+CGG - chr3_4:77437405-77437424 None:intergenic 25.0%
! ATACGGTATAATCTGTTATT+TGG + chr3_4:77437436-77437455 Msa0523980:intron 25.0%
! AATATTTACATTCAACTTCG+TGG - chr3_4:77437491-77437510 None:intergenic 25.0%
! AAAATAATTAGGAACCTCAT+TGG - chr3_4:77437589-77437608 None:intergenic 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr3_4:77437695-77437714 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr3_4:77437699-77437718 Msa0523980:CDS 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr3_4:77437700-77437719 Msa0523980:CDS 25.0%
! GAATTTATACCTGAAATCAT+TGG - chr3_4:77437858-77437877 None:intergenic 25.0%
! AATATCTAAGAGTTTGAACT+CGG - chr3_4:77438129-77438148 None:intergenic 25.0%
! ATATATTTCATGTTCAATGC+AGG + chr3_4:77438206-77438225 Msa0523980:intron 25.0%
! AGTAGTGATAAATGAAGAAA+AGG + chr3_4:77439080-77439099 Msa0523980:CDS 25.0%
! TGATAAATGAAGAAAAGGAA+AGG + chr3_4:77439085-77439104 Msa0523980:CDS 25.0%
!! AAATCAACATAGTTTTTCAC+TGG - chr3_4:77439204-77439223 None:intergenic 25.0%
!!! TAAATTTTGGAAGCTTCAAT+TGG - chr3_4:77439258-77439277 None:intergenic 25.0%
TGAACAATTTACATACAGAG+AGG - chr3_4:77434727-77434746 None:intergenic 30.0%
!!! CATCATCAGTTTTAGAAAGA+TGG + chr3_4:77434754-77434773 Msa0523980:exon 30.0%
!! TTTTAGAAAGATGGCAGAAT+CGG + chr3_4:77434763-77434782 Msa0523980:exon 30.0%
ATATGAAGATCTGATTGTGA+AGG - chr3_4:77434920-77434939 None:intergenic 30.0%
!! TAGTTTGTTTGTTGTTTACG+AGG + chr3_4:77435188-77435207 Msa0523980:intron 30.0%
!!! AGCTATAAGCTAGCTTTTTT+GGG - chr3_4:77435434-77435453 None:intergenic 30.0%
!!! AAGCTATAAGCTAGCTTTTT+TGG - chr3_4:77435435-77435454 None:intergenic 30.0%
!!! AAGCTTGTTTTGAAAGAATG+AGG + chr3_4:77435470-77435489 Msa0523980:intron 30.0%
AAGAAAGTGATATCAAACGT+GGG - chr3_4:77435667-77435686 None:intergenic 30.0%
AAAGAAAGTGATATCAAACG+TGG - chr3_4:77435668-77435687 None:intergenic 30.0%
! CGTTTGATATCACTTTCTTT+TGG + chr3_4:77435668-77435687 Msa0523980:intron 30.0%
! TTGATATCACTTTCTTTTGG+TGG + chr3_4:77435671-77435690 Msa0523980:intron 30.0%
CAAAGTGGACATTAGTTATA+AGG - chr3_4:77436287-77436306 None:intergenic 30.0%
!! TTTTAGGTGGTGATATGTTT+TGG - chr3_4:77436472-77436491 None:intergenic 30.0%
!!! TTTTTGGAGTTTGTTTTAGG+TGG - chr3_4:77436485-77436504 None:intergenic 30.0%
!!! TTTGACTCAAGTTGGTTTTT+GGG - chr3_4:77436707-77436726 None:intergenic 30.0%
AATTTGGTATTATAGTCTGG+TGG - chr3_4:77436766-77436785 None:intergenic 30.0%
GCTAATTTGGTATTATAGTC+TGG - chr3_4:77436769-77436788 None:intergenic 30.0%
GACTATAATACCAAATTAGC+AGG + chr3_4:77436769-77436788 Msa0523980:intron 30.0%
!!! ACTTGATTTGGTTTTTTCTC+TGG - chr3_4:77436816-77436835 None:intergenic 30.0%
AATATGTAAGACGAAAGACA+TGG + chr3_4:77436911-77436930 Msa0523980:intron 30.0%
CAACACAAACATAAATCTAG+AGG + chr3_4:77437301-77437320 Msa0523980:intron 30.0%
TATTTGAGAGTAGCATTCTT+GGG - chr3_4:77437534-77437553 None:intergenic 30.0%
TTATTTGAGAGTAGCATTCT+TGG - chr3_4:77437535-77437554 None:intergenic 30.0%
!!! TTTTTTCTGGTTCATATTGG+TGG + chr3_4:77437556-77437575 Msa0523980:intron 30.0%
CAGAAAATCAAAAGCTTGAT+TGG + chr3_4:77437765-77437784 Msa0523980:CDS 30.0%
GACTGATAGAGTATATCTTA+AGG + chr3_4:77437787-77437806 Msa0523980:CDS 30.0%
AGTATATCTTAAGGTACATC+CGG + chr3_4:77437796-77437815 Msa0523980:CDS 30.0%
ATCAGAGGAATTTCAAACTT+TGG + chr3_4:77437822-77437841 Msa0523980:CDS 30.0%
TATTTAATAACTCCACGGAA+AGG + chr3_4:77437943-77437962 Msa0523980:intron 30.0%
TAGATTTGTAGGGACTAAAA+AGG - chr3_4:77438011-77438030 None:intergenic 30.0%
CAAAAAATTGTACGTTTGCA+AGG - chr3_4:77438080-77438099 None:intergenic 30.0%
AAATAATTGTGTAACGGTCA+TGG - chr3_4:77438169-77438188 None:intergenic 30.0%
! AAGTTTAAGGCAGTTATATG+AGG + chr3_4:77438252-77438271 Msa0523980:CDS 30.0%
!!! TTTTTTGCTGCAAGATAAAG+AGG + chr3_4:77438441-77438460 Msa0523980:CDS 30.0%
! GATTATCTTTTAGCACTTGA+AGG - chr3_4:77438474-77438493 None:intergenic 30.0%
AAGTGCTAAAAGATAATCAG+TGG + chr3_4:77438476-77438495 Msa0523980:CDS 30.0%
!! TAATGTTGGTGATCAAATAG+AGG + chr3_4:77438534-77438553 Msa0523980:CDS 30.0%
! TGTAGGTTTTTCATATTTGC+AGG - chr3_4:77438850-77438869 None:intergenic 30.0%
AACCTACATCAACTAAATGT+TGG + chr3_4:77438862-77438881 Msa0523980:intron 30.0%
ACCTACATCAACTAAATGTT+GGG + chr3_4:77438863-77438882 Msa0523980:intron 30.0%
! TAATCTCTTGTTCTGAATCT+GGG - chr3_4:77439134-77439153 None:intergenic 30.0%
! TTAATCTCTTGTTCTGAATC+TGG - chr3_4:77439135-77439154 None:intergenic 30.0%
! TTCACTGGTCTGTATAATAT+TGG - chr3_4:77439189-77439208 None:intergenic 30.0%
AATATTACCAACAGGGAAAA+AGG + chr3_4:77439232-77439251 Msa0523980:CDS 30.0%
TAGTTATGTACAAGACTTCT+AGG + chr3_4:77439282-77439301 Msa0523980:three_prime_UTR 30.0%
ATTGTGAAAATTCTGAGCTA+TGG + chr3_4:77439354-77439373 Msa0523980:three_prime_UTR 30.0%
TACAATGAATTAGGTGGTGT+TGG + chr3_4:77434875-77434894 Msa0523980:CDS 35.0%
TGTAGATGGAGAAATGAGTT+TGG - chr3_4:77434960-77434979 None:intergenic 35.0%
TATTCAAGGGGATTTGAACT+CGG - chr3_4:77435249-77435268 None:intergenic 35.0%
AGTTCAAATCCCCTTGAATA+CGG + chr3_4:77435249-77435268 Msa0523980:intron 35.0%
! AAAGCTAGCTTATAGCTTCT+TGG + chr3_4:77435437-77435456 Msa0523980:intron 35.0%
!!! GTAGCTTTTTAGCTTATAGC+TGG + chr3_4:77435552-77435571 Msa0523980:intron 35.0%
GGTAAAATTAGCTGTTGAAG+TGG - chr3_4:77436086-77436105 None:intergenic 35.0%
! AAAAGCTAGCTTATAGCTGA+TGG - chr3_4:77436163-77436182 None:intergenic 35.0%
AACTATACTTAGGGTGTGTT+TGG - chr3_4:77436236-77436255 None:intergenic 35.0%
TATAAGGTTAAGACGCATGA+GGG - chr3_4:77436271-77436290 None:intergenic 35.0%
TTATAAGGTTAAGACGCATG+AGG - chr3_4:77436272-77436291 None:intergenic 35.0%
TGGACGAATCAAGATACAAA+TGG + chr3_4:77436389-77436408 Msa0523980:intron 35.0%
!!! TTATCTTCAGGGGTGTTTTT+AGG - chr3_4:77436444-77436463 None:intergenic 35.0%
!! TTTTGGAGGGTTTATCTTCA+GGG - chr3_4:77436455-77436474 None:intergenic 35.0%
!!! ATTTTGAGGGTGTTCTTTGT+GGG - chr3_4:77436562-77436581 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+TGG - chr3_4:77436563-77436582 None:intergenic 35.0%
!!! GTCTGGGAGTTTTATTTTGA+GGG - chr3_4:77436575-77436594 None:intergenic 35.0%
!!! CTTTGACTCAAGTTGGTTTT+TGG - chr3_4:77436708-77436727 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr3_4:77436739-77436758 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr3_4:77436740-77436759 None:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+CGG + chr3_4:77436739-77436758 Msa0523980:intron 35.0%
!!! ACATATTGTGTGCTGGTTTT+CGG - chr3_4:77436898-77436917 None:intergenic 35.0%
TTGGATGGTTTAGGTGTTTA+CGG - chr3_4:77437009-77437028 None:intergenic 35.0%
!! TTGTGCTTTTTGGATGGTTT+AGG - chr3_4:77437018-77437037 None:intergenic 35.0%
!! TCTTGTTTGTGCTTTTTGGA+TGG - chr3_4:77437024-77437043 None:intergenic 35.0%
!! TAGCTCTTGTTTGTGCTTTT+TGG - chr3_4:77437028-77437047 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr3_4:77437289-77437308 None:intergenic 35.0%
GTGATTTAGGCAATAAACCA+TGG + chr3_4:77437611-77437630 Msa0523980:intron 35.0%
GCAATTCTTTGAACTTCCAA+AGG + chr3_4:77437676-77437695 Msa0523980:CDS 35.0%
TTGAAATTCCTCTGATCTTC+CGG - chr3_4:77437818-77437837 None:intergenic 35.0%
! CTGAAATCATTGGGTTTTTG+GGG - chr3_4:77437848-77437867 None:intergenic 35.0%
! CCTGAAATCATTGGGTTTTT+GGG - chr3_4:77437849-77437868 None:intergenic 35.0%
! ACCTGAAATCATTGGGTTTT+TGG - chr3_4:77437850-77437869 None:intergenic 35.0%
CATTGTTAATGGGAACTTAG+TGG - chr3_4:77437887-77437906 None:intergenic 35.0%
! CAAGTTCAGTGATTTTGCTA+TGG - chr3_4:77438290-77438309 None:intergenic 35.0%
CATAGCAAAATCACTGAACT+TGG + chr3_4:77438288-77438307 Msa0523980:CDS 35.0%
AAAATCACTGAACTTGGAAG+AGG + chr3_4:77438294-77438313 Msa0523980:CDS 35.0%
CACGACAAAAGTAGAAGAAT+CGG + chr3_4:77438780-77438799 Msa0523980:intron 35.0%
GCTATTTGTCATATTGTGTG+TGG - chr3_4:77438924-77438943 None:intergenic 35.0%
! CATAGATATAAGCTTTGGTG+TGG - chr3_4:77438969-77438988 None:intergenic 35.0%
! GTAACACATTCAAGTTCAAC+AGG - chr3_4:77439018-77439037 None:intergenic 35.0%
GTTACACAGATAATGAGCAA+TGG + chr3_4:77439033-77439052 Msa0523980:intron 35.0%
TTTATCACTACTCTGTGTAC+TGG - chr3_4:77439072-77439091 None:intergenic 35.0%
! CTTCTAGGAACTTTGTGAAA+TGG + chr3_4:77439297-77439316 Msa0523980:three_prime_UTR 35.0%
!! TCGGCAGAGGTTGATATAAT+CGG + chr3_4:77434791-77434810 Msa0523980:CDS 40.0%
ATCAGTTCAAGAACTGTCGT+TGG + chr3_4:77434820-77434839 Msa0523980:CDS 40.0%
AGTTTGGCAATGTCAACAAC+TGG - chr3_4:77434944-77434963 None:intergenic 40.0%
AAATCCCCTTGAATACGGTT+TGG + chr3_4:77435254-77435273 Msa0523980:intron 40.0%
TTGAAAGAATGAGGCGTGTT+TGG + chr3_4:77435479-77435498 Msa0523980:intron 40.0%
! AAACATCACGTTGATGGACA+AGG + chr3_4:77435635-77435654 Msa0523980:intron 40.0%
TATGGTGTACCGTCTATATG+CGG - chr3_4:77436417-77436436 None:intergenic 40.0%
TTTGGAGGGTTTATCTTCAG+GGG - chr3_4:77436454-77436473 None:intergenic 40.0%
!!! GTTTTGGAGGGTTTATCTTC+AGG - chr3_4:77436456-77436475 None:intergenic 40.0%
!! AGGTGGTGATATGTTTTGGA+GGG - chr3_4:77436468-77436487 None:intergenic 40.0%
!! TAGGTGGTGATATGTTTTGG+AGG - chr3_4:77436469-77436488 None:intergenic 40.0%
!!! GGTCTGGGAGTTTTATTTTG+AGG - chr3_4:77436576-77436595 None:intergenic 40.0%
ATAGCTGCATGATCCTTCTT+CGG - chr3_4:77436638-77436657 None:intergenic 40.0%
GTCAGTTCTTTGACTCAAGT+TGG - chr3_4:77436715-77436734 None:intergenic 40.0%
!!! TGGTTTTTTCTCTGGTGTAC+CGG - chr3_4:77436808-77436827 None:intergenic 40.0%
! AGTTCATTTGGCTTCGAGAT+CGG - chr3_4:77436869-77436888 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr3_4:77436905-77436924 None:intergenic 40.0%
GTTTAGGTGTTTACGGAGTT+TGG - chr3_4:77437002-77437021 None:intergenic 40.0%
TAGATGCAACCTCTGTTACA+CGG - chr3_4:77437069-77437088 None:intergenic 40.0%
GTAACAGAGGTTGCATCTAA+AGG + chr3_4:77437070-77437089 Msa0523980:intron 40.0%
AGGTTATTCAATTGTGGTGG+GGG - chr3_4:77437194-77437213 None:intergenic 40.0%
GAGGTTATTCAATTGTGGTG+GGG - chr3_4:77437195-77437214 None:intergenic 40.0%
GGAGGTTATTCAATTGTGGT+GGG - chr3_4:77437196-77437215 None:intergenic 40.0%
TGGAGGTTATTCAATTGTGG+TGG - chr3_4:77437197-77437216 None:intergenic 40.0%
TGGTGGAGGTTATTCAATTG+TGG - chr3_4:77437200-77437219 None:intergenic 40.0%
! GTTTCTTGGTGAGGATGTTT+TGG - chr3_4:77437275-77437294 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr3_4:77437284-77437303 None:intergenic 40.0%
CGAAATCCAACGACAAAACA+CGG + chr3_4:77437328-77437347 Msa0523980:intron 40.0%
GAAATCCAACGACAAAACAC+GGG + chr3_4:77437329-77437348 Msa0523980:intron 40.0%
! CCTTTTTATGATCTGGGTTG+TGG - chr3_4:77437379-77437398 None:intergenic 40.0%
CCACAACCCAGATCATAAAA+AGG + chr3_4:77437376-77437395 Msa0523980:intron 40.0%
CAACCCAGATCATAAAAAGG+CGG + chr3_4:77437379-77437398 Msa0523980:intron 40.0%
GCATTCTTGGGTTTGTGAAA+AGG - chr3_4:77437522-77437541 None:intergenic 40.0%
CTTGTCTCTTGACAAAGTGA+GGG + chr3_4:77437643-77437662 Msa0523980:CDS 40.0%
AAATATGCAAGGGAGCCAAA+CGG + chr3_4:77437710-77437729 Msa0523980:CDS 40.0%
CCATATCCTTCAATACCGTT+TGG - chr3_4:77437728-77437747 None:intergenic 40.0%
! CCAAACGGTATTGAAGGATA+TGG + chr3_4:77437725-77437744 Msa0523980:CDS 40.0%
CCCAAAAACCCAATGATTTC+AGG + chr3_4:77437846-77437865 Msa0523980:CDS 40.0%
TGTTAATGGGAACTTAGTGG+AGG - chr3_4:77437884-77437903 None:intergenic 40.0%
GATTGCTTCCTAAAGGAATG+TGG + chr3_4:77438316-77438335 Msa0523980:CDS 40.0%
TTTACGCCTAGAACATGATC+AGG - chr3_4:77438394-77438413 None:intergenic 40.0%
ATAGATGATCCATCAGCATG+TGG - chr3_4:77438418-77438437 None:intergenic 40.0%
CTGCAAGATAAAGAGGTAGA+AGG + chr3_4:77438448-77438467 Msa0523980:CDS 40.0%
!! CATTAATCACGAGAGCATCA+GGG - chr3_4:77438519-77438538 None:intergenic 40.0%
!! ACATTAATCACGAGAGCATC+AGG - chr3_4:77438520-77438539 None:intergenic 40.0%
GATGCTCTCGTGATTAATGT+TGG + chr3_4:77438520-77438539 Msa0523980:CDS 40.0%
!! GTTGGTGATCAAATAGAGGT+TGG + chr3_4:77438538-77438557 Msa0523980:intron 40.0%
CACGATAGTATCAGAGATGA+AGG - chr3_4:77438661-77438680 None:intergenic 40.0%
! GCCCAACATTTAGTTGATGT+AGG - chr3_4:77438867-77438886 None:intergenic 40.0%
TAGAAAGATGGCAGAATCGG+TGG + chr3_4:77434766-77434785 Msa0523980:exon 45.0%
AGAAAGATGGCAGAATCGGT+GGG + chr3_4:77434767-77434786 Msa0523980:exon 45.0%
CTCTTCTTGGGGATTGTTTC+AGG + chr3_4:77435015-77435034 Msa0523980:CDS 45.0%
! TTTACGAGGTATCAGCTCAG+TGG + chr3_4:77435202-77435221 Msa0523980:intron 45.0%
CAGTCCAAACCGTATTCAAG+GGG - chr3_4:77435261-77435280 None:intergenic 45.0%
GCAGTCCAAACCGTATTCAA+GGG - chr3_4:77435262-77435281 None:intergenic 45.0%
TGCAGTCCAAACCGTATTCA+AGG - chr3_4:77435263-77435282 None:intergenic 45.0%
TTTGGACTGCAAGCAGTTCT+TGG + chr3_4:77435272-77435291 Msa0523980:intron 45.0%
!! TGATCCTCTAAGGCTGTGTT+TGG + chr3_4:77435405-77435424 Msa0523980:intron 45.0%
GTTACCAAACACAGCCTTAG+AGG - chr3_4:77435412-77435431 None:intergenic 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr3_4:77436405-77436424 Msa0523980:intron 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG - chr3_4:77436435-77436454 None:intergenic 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG - chr3_4:77436441-77436460 None:intergenic 45.0%
TGTGGGTGAGTAGTGACAAT+GGG - chr3_4:77436545-77436564 None:intergenic 45.0%
TTGTGGGTGAGTAGTGACAA+TGG - chr3_4:77436546-77436565 None:intergenic 45.0%
TTCGAAATGTGGCTCAGCTT+GGG - chr3_4:77436605-77436624 None:intergenic 45.0%
GTTAGGTGCTCTTCGAAATG+TGG - chr3_4:77436616-77436635 None:intergenic 45.0%
TGCATGATCCTTCTTCGGTT+AGG - chr3_4:77436633-77436652 None:intergenic 45.0%
TTTGTGTTGTGCTCTTTCGG+TGG - chr3_4:77436683-77436702 None:intergenic 45.0%
! GGCTTTGTGTTGTGCTCTTT+CGG - chr3_4:77436686-77436705 None:intergenic 45.0%
!!! TTTTTTCTCTGGTGTACCGG+GGG - chr3_4:77436805-77436824 None:intergenic 45.0%
!!! GTTTTTTCTCTGGTGTACCG+GGG - chr3_4:77436806-77436825 None:intergenic 45.0%
!!! GGTTTTTTCTCTGGTGTACC+GGG - chr3_4:77436807-77436826 None:intergenic 45.0%
! GTTCATTTGGCTTCGAGATC+GGG - chr3_4:77436868-77436887 None:intergenic 45.0%
GATCTCGAAGCCAAATGAAC+TGG + chr3_4:77436868-77436887 Msa0523980:intron 45.0%
!!! ATTGTGTGCTGGTTTTCGGT+GGG - chr3_4:77436894-77436913 None:intergenic 45.0%
!!! TATTGTGTGCTGGTTTTCGG+TGG - chr3_4:77436895-77436914 None:intergenic 45.0%
AGGTGTTTACGGAGTTTGGA+GGG - chr3_4:77436998-77437017 None:intergenic 45.0%
TAGGTGTTTACGGAGTTTGG+AGG - chr3_4:77436999-77437018 None:intergenic 45.0%
AGATGCAACCTCTGTTACAC+GGG - chr3_4:77437068-77437087 None:intergenic 45.0%
!! GGTGTTTTAAGTGAGGAGGT+GGG - chr3_4:77437114-77437133 None:intergenic 45.0%
!! TGGTGTTTTAAGTGAGGAGG+TGG - chr3_4:77437115-77437134 None:intergenic 45.0%
!! GGTTGGTGTTTTAAGTGAGG+AGG - chr3_4:77437118-77437137 None:intergenic 45.0%
!! GGTGGTTGGTGTTTTAAGTG+AGG - chr3_4:77437121-77437140 None:intergenic 45.0%
!! TGATGATGTGTGTTGGTGGT+TGG - chr3_4:77437135-77437154 None:intergenic 45.0%
! TTATTCAATTGTGGTGGGGG+TGG - chr3_4:77437191-77437210 None:intergenic 45.0%
!! TCTTGGTGAGGATGTTTTGG+CGG - chr3_4:77437272-77437291 None:intergenic 45.0%
GAGACAAGCTTGTCATACCA+TGG - chr3_4:77437631-77437650 None:intergenic 45.0%
GCTTGTCTCTTGACAAAGTG+AGG + chr3_4:77437642-77437661 Msa0523980:CDS 45.0%
AAGACAGCAAAACCTTTCCG+TGG - chr3_4:77437958-77437977 None:intergenic 45.0%
GGAAGAGGATTGCTTCCTAA+AGG + chr3_4:77438309-77438328 Msa0523980:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr3_4:77438327-77438346 None:intergenic 45.0%
ACATGATCAGGCATAGGACA+TGG - chr3_4:77438382-77438401 None:intergenic 45.0%
CCTAGAACATGATCAGGCAT+AGG - chr3_4:77438388-77438407 None:intergenic 45.0%
CCTATGCCTGATCATGTTCT+AGG + chr3_4:77438385-77438404 Msa0523980:CDS 45.0%
!! ACGAGAGCATCAGGGATTAT+TGG - chr3_4:77438511-77438530 None:intergenic 45.0%
TAAACCAGTCGACAGACTAG+TGG + chr3_4:77439152-77439171 Msa0523980:CDS 45.0%
!!! CAATTGGCCTTTTTCCCTGT+TGG - chr3_4:77439242-77439261 None:intergenic 45.0%
!! TAAAATTATTATATGTATAA+TGG + chr3_4:77435930-77435949 Msa0523980:intron 5.0%
!! AAAATTATTATATGTATAAT+GGG + chr3_4:77435931-77435950 Msa0523980:intron 5.0%
TTCTCCATCTACAGCACAGC+AGG + chr3_4:77434967-77434986 Msa0523980:CDS 50.0%
AGTTCCTGCTGTGCTGTAGA+TGG - chr3_4:77434974-77434993 None:intergenic 50.0%
TCCACTCTGCTCTCTCTTCT+TGG + chr3_4:77435002-77435021 Msa0523980:CDS 50.0%
CCACTCTGCTCTCTCTTCTT+GGG + chr3_4:77435003-77435022 Msa0523980:CDS 50.0%
CACTCTGCTCTCTCTTCTTG+GGG + chr3_4:77435004-77435023 Msa0523980:CDS 50.0%
GACTGCAAGCAGTTCTTGGT+GGG + chr3_4:77435276-77435295 Msa0523980:intron 50.0%
CTTCGAAATGTGGCTCAGCT+TGG - chr3_4:77436606-77436625 None:intergenic 50.0%
!! GAAGAGCACCTAACCGAAGA+AGG + chr3_4:77436622-77436641 Msa0523980:intron 50.0%
TTTCGGTGGGCCAGTTCATT+TGG - chr3_4:77436881-77436900 None:intergenic 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr3_4:77437041-77437060 Msa0523980:intron 50.0%
AACATGGACCCGTGTAACAG+AGG + chr3_4:77437057-77437076 Msa0523980:intron 50.0%
!! TAGTGATGCAGTGATGGTGG+TGG - chr3_4:77437247-77437266 None:intergenic 50.0%
GTTGTGGTTCCGCTTCAAAC+CGG - chr3_4:77437363-77437382 None:intergenic 50.0%
! CGGCCGCCTTTTTATGATCT+GGG - chr3_4:77437385-77437404 None:intergenic 50.0%
! TTGGTGGCTGAGTTCCAATG+AGG + chr3_4:77437572-77437591 Msa0523980:intron 50.0%
! AGGGAGCCAAACGGTATTGA+AGG + chr3_4:77437719-77437738 Msa0523980:CDS 50.0%
AGGTACATCCGGAAGATCAG+AGG + chr3_4:77437807-77437826 Msa0523980:CDS 50.0%
GATCAGGCATAGGACATGGA+GGG - chr3_4:77438378-77438397 None:intergenic 50.0%
TGATCAGGCATAGGACATGG+AGG - chr3_4:77438379-77438398 None:intergenic 50.0%
CTACTCTGTGTACTGGACTC+TGG - chr3_4:77439065-77439084 None:intergenic 50.0%
! GATGGCAGAATCGGTGGGTT+CGG + chr3_4:77434772-77434791 Msa0523980:exon 55.0%
CCCAAGAAGAGAGAGCAGAG+TGG - chr3_4:77435006-77435025 None:intergenic 55.0%
GGACTGCAAGCAGTTCTTGG+TGG + chr3_4:77435275-77435294 Msa0523980:intron 55.0%
TCCATACCTTGCGTCTTGCG+GGG - chr3_4:77436373-77436392 None:intergenic 55.0%
GTCCATACCTTGCGTCTTGC+GGG - chr3_4:77436374-77436393 None:intergenic 55.0%
CGTCCATACCTTGCGTCTTG+CGG - chr3_4:77436375-77436394 None:intergenic 55.0%
TGAGTAGTGACAATGGGCGG+TGG - chr3_4:77436539-77436558 None:intergenic 55.0%
GGGTGAGTAGTGACAATGGG+CGG - chr3_4:77436542-77436561 None:intergenic 55.0%
TGTGGCTCAGCTTGGGTGTT+GGG - chr3_4:77436598-77436617 None:intergenic 55.0%
ATGTGGCTCAGCTTGGGTGT+TGG - chr3_4:77436599-77436618 None:intergenic 55.0%
GTGCTCTTTCGGTGGTTCAG+AGG - chr3_4:77436675-77436694 None:intergenic 55.0%
TTGGCTTCGAGATCGGGAGT+CGG - chr3_4:77436862-77436881 None:intergenic 55.0%
TGAGGAGGTGGGTGCTTGTT+GGG - chr3_4:77437103-77437122 None:intergenic 55.0%
! GGGGTGATGATGTGTGTTGG+TGG - chr3_4:77437139-77437158 None:intergenic 55.0%
! TGGGGGGTGATGATGTGTGT+TGG - chr3_4:77437142-77437161 None:intergenic 55.0%
!! TGGTGGTGGTGAAGTGTGGT+GGG - chr3_4:77437161-77437180 None:intergenic 55.0%
GCGTAGTGATGCAGTGATGG+TGG - chr3_4:77437250-77437269 None:intergenic 55.0%
! GCGGCCGCCTTTTTATGATC+TGG - chr3_4:77437386-77437405 None:intergenic 55.0%
GGCGTAAAGCCACATGCTGA+TGG + chr3_4:77438406-77438425 Msa0523980:CDS 55.0%
CCAGTCGACAGACTAGTGGA+CGG + chr3_4:77439156-77439175 Msa0523980:CDS 55.0%
! CAGTCGACAGACTAGTGGAC+GGG + chr3_4:77439157-77439176 Msa0523980:CDS 55.0%
! AGAATCGGTGGGTTCGGCAG+AGG + chr3_4:77434778-77434797 Msa0523980:CDS 60.0%
TCCCCGCAAGACGCAAGGTA+TGG + chr3_4:77436369-77436388 Msa0523980:intron 60.0%
!! CAGCTTGGGTGTTGGGGTCT+GGG - chr3_4:77436591-77436610 None:intergenic 60.0%
!! TCAGCTTGGGTGTTGGGGTC+TGG - chr3_4:77436592-77436611 None:intergenic 60.0%
! GTGGCTCAGCTTGGGTGTTG+GGG - chr3_4:77436597-77436616 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr3_4:77436782-77436801 None:intergenic 60.0%
TGGCTTCGAGATCGGGAGTC+GGG - chr3_4:77436861-77436880 None:intergenic 60.0%
! GAGGAGGTGGGTGCTTGTTG+GGG - chr3_4:77437102-77437121 None:intergenic 60.0%
GTGAGGAGGTGGGTGCTTGT+TGG - chr3_4:77437104-77437123 None:intergenic 60.0%
! TGGTGGTGAAGTGTGGTGGG+GGG - chr3_4:77437158-77437177 None:intergenic 60.0%
! GTGGTGGTGAAGTGTGGTGG+GGG - chr3_4:77437159-77437178 None:intergenic 60.0%
! GGTGGTGGTGAAGTGTGGTG+GGG - chr3_4:77437160-77437179 None:intergenic 60.0%
!! GTGGTGGTGGTGAAGTGTGG+TGG - chr3_4:77437162-77437181 None:intergenic 60.0%
!! TGCGTGGTGGTGGTGAAGTG+TGG - chr3_4:77437165-77437184 None:intergenic 60.0%
!! TGGTGATGCAGTGGTGGTGG+AGG - chr3_4:77437214-77437233 None:intergenic 60.0%
!! GTGATGGTGGTGGTGTTGCG+CGG - chr3_4:77437237-77437256 None:intergenic 60.0%
GCGGCGTAGTGATGCAGTGA+TGG - chr3_4:77437253-77437272 None:intergenic 60.0%
! CGCTGCCCGTGTTTTGTCGT+TGG - chr3_4:77437337-77437356 None:intergenic 60.0%
! CCGTCCACTAGTCTGTCGAC+TGG - chr3_4:77439159-77439178 None:intergenic 60.0%
CGTCTTCCCCGCAAGACGCA+AGG + chr3_4:77436364-77436383 Msa0523980:intron 65.0%
TCGGTGGTTCAGAGGTCGCG+AGG - chr3_4:77436667-77436686 None:intergenic 65.0%
GGCTTCGAGATCGGGAGTCG+GGG - chr3_4:77436860-77436879 None:intergenic 65.0%
! CGGTGGTGATGCAGTGGTGG+TGG - chr3_4:77437217-77437236 None:intergenic 65.0%
! GTTGCGCGGTGGTGATGCAG+TGG - chr3_4:77437223-77437242 None:intergenic 65.0%
!! ATGGTGGTGGTGTTGCGCGG+TGG - chr3_4:77437234-77437253 None:intergenic 65.0%
CAAAACACGGGCAGCGACGC+CGG + chr3_4:77437341-77437360 Msa0523980:intron 65.0%
!! GCAGCGACGCCGGTTTGAAG+CGG + chr3_4:77437351-77437370 Msa0523980:intron 65.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr3_4:77436798-77436817 None:intergenic 70.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr3_4:77436799-77436818 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr3_4:77436800-77436819 None:intergenic 70.0%
! GGGGTGGTGATGCGTGGTGG+TGG - chr3_4:77437175-77437194 None:intergenic 70.0%
! GTGGGGGTGGTGATGCGTGG+TGG - chr3_4:77437178-77437197 None:intergenic 70.0%
! GTGGTGGGGGTGGTGATGCG+TGG - chr3_4:77437181-77437200 None:intergenic 70.0%
! GCGCGGTGGTGATGCAGTGG+TGG - chr3_4:77437220-77437239 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr3_4:77436786-77436805 Msa0523980:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 77434708 77439479 77434708 ID=Msa0523980;Name=Msa0523980
chr3_4 mRNA 77434708 77439479 77434708 ID=Msa0523980-mRNA-1;Parent=Msa0523980;Name=Msa0523980-mRNA-1;_AED=0.41;_eAED=0.41;_QI=65|1|1|1|1|1|4|201|358
chr3_4 exon 77434708 77435036 77434708 ID=Msa0523980-mRNA-1:exon:22710;Parent=Msa0523980-mRNA-1
chr3_4 exon 77437620 77437867 77437620 ID=Msa0523980-mRNA-1:exon:22711;Parent=Msa0523980-mRNA-1
chr3_4 exon 77438228 77438555 77438228 ID=Msa0523980-mRNA-1:exon:22712;Parent=Msa0523980-mRNA-1
chr3_4 exon 77439042 77439479 77439042 ID=Msa0523980-mRNA-1:exon:22713;Parent=Msa0523980-mRNA-1
chr3_4 five_prime_UTR 77434708 77434772 77434708 ID=Msa0523980-mRNA-1:five_prime_utr;Parent=Msa0523980-mRNA-1
chr3_4 CDS 77434773 77435036 77434773 ID=Msa0523980-mRNA-1:cds;Parent=Msa0523980-mRNA-1
chr3_4 CDS 77437620 77437867 77437620 ID=Msa0523980-mRNA-1:cds;Parent=Msa0523980-mRNA-1
chr3_4 CDS 77438228 77438555 77438228 ID=Msa0523980-mRNA-1:cds;Parent=Msa0523980-mRNA-1
chr3_4 CDS 77439042 77439278 77439042 ID=Msa0523980-mRNA-1:cds;Parent=Msa0523980-mRNA-1
chr3_4 three_prime_UTR 77439279 77439479 77439279 ID=Msa0523980-mRNA-1:three_prime_utr;Parent=Msa0523980-mRNA-1
Gene Sequence

>Msa0523980

ATGGCAGAATCGGTGGGTTCGGCAGAGGTTGATATAATCGGTTGTAAATCAGTTCAAGAACTGTCGTTGGATTCTGAAAATCTACCACCAAATAATTATATCTACAATGAATTAGGTGGTGTTGGATTTCGTGAAGCTCTTCTTCCTTCACAATCAGATCTTCATATTCCAGTTGTTGACATTGCCAAACTCATTTCTCCATCTACAGCACAGCAGGAACTTCATAAACTCCACTCTGCTCTCTCTTCTTGGGGATTGTTTCAGGCAATAAACCATGGTATGACAAGCTTGTCTCTTGACAAAGTGAGGGAAATTTCAAAGCAATTCTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAGCCAAACGGTATTGAAGGATATGGAAATGATGTAATATTATCAGAAAATCAAAAGCTTGATTGGACTGATAGAGTATATCTTAAGGTACATCCGGAAGATCAGAGGAATTTCAAACTTTGGCCCCAAAAACCCAATGATTTCAGGAATACTATAGAACAATATACTGAAAGTTTAAGGCAGTTATATGAGGTAATTTTAAGAGCCATAGCAAAATCACTGAACTTGGAAGAGGATTGCTTCCTAAAGGAATGTGGAGAGAGAGCTACAATGTTTATGAGAATCAATTACTACCCTCCATGTCCTATGCCTGATCATGTTCTAGGCGTAAAGCCACATGCTGATGGATCATCTATAACTTTTTTGCTGCAAGATAAAGAGGTAGAAGGCCTTCAAGTGCTAAAAGATAATCAGTGGTTTAAAGTTCCAATAATCCCTGATGCTCTCGTGATTAATGTTGGTGATCAAATAGAGATAATGAGCAATGGAATTTTCCAGAGTCCAGTACACAGAGTAGTGATAAATGAAGAAAAGGAAAGGCTCACAGTAGCAATGTTCTGCATCCCAGATTCAGAACAAGAGATTAAACCAGTCGACAGACTAGTGGACGGGACAAAGCCAATATTATACAGACCAGTGAAAAACTATGTTGATTTATATTTTCAATATTACCAACAGGGAAAAAGGCCAATTGAAGCTTCCAAAATTTAA
Protein sequence

>Msa0523980

MAESVGSAEVDIIGCKSVQELSLDSENLPPNNYIYNELGGVGFREALLPSQSDLHIPVVDIAKLISPSTAQQELHKLHSALSSWGLFQAINHGMTSLSLDKVREISKQFFELPKEEKQKYAREPNGIEGYGNDVILSENQKLDWTDRVYLKVHPEDQRNFKLWPQKPNDFRNTIEQYTESLRQLYEVILRAIAKSLNLEEDCFLKECGERATMFMRINYYPPCPMPDHVLGVKPHADGSSITFLLQDKEVEGLQVLKDNQWFKVPIIPDALVINVGDQIEIMSNGIFQSPVHRVVINEEKERLTVAMFCIPDSEQEIKPVDRLVDGTKPILYRPVKNYVDLYFQYYQQGKRPIEASKI*