Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470870 | XP_013461343.1 | 97.830 | 507 | 11 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1016 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470870 | sp|Q9LPL6|TOL3_ARATH | 58.333 | 528 | 172 | 13 | 1 | 506 | 1 | 502 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470870 | A0A072V220 | 97.830 | 507 | 11 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1016 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092680 | Msa0470870 | -0.811217 | 7.816604e-51 | -8.615850e-47 |
| Msa0092730 | Msa0470870 | -0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0094420 | Msa0470870 | -0.802314 | 5.949187e-49 | -8.615850e-47 |
| Msa0137600 | Msa0470870 | -0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0140530 | Msa0470870 | 0.821893 | 3.169630e-53 | -8.615850e-47 |
| Msa0150210 | Msa0470870 | -0.801599 | 8.345399e-49 | -8.615850e-47 |
| Msa0222070 | Msa0470870 | -0.805013 | 1.638204e-49 | -8.615850e-47 |
| Msa0222120 | Msa0470870 | -0.808905 | 2.461879e-50 | -8.615850e-47 |
| Msa0227490 | Msa0470870 | -0.806759 | 7.038958e-50 | -8.615850e-47 |
| Msa0227500 | Msa0470870 | -0.805224 | 1.479891e-49 | -8.615850e-47 |
| Msa0381580 | Msa0470870 | 0.829171 | 5.975910e-55 | -8.615850e-47 |
| Msa0418000 | Msa0470870 | -0.802718 | 4.912622e-49 | -8.615850e-47 |
| Msa0470350 | Msa0470870 | 0.827086 | 1.899407e-54 | -8.615850e-47 |
| Msa0470870 | Msa0524120 | -0.802070 | 6.678950e-49 | -8.615850e-47 |
| Msa0470870 | Msa0538240 | -0.819051 | 1.423070e-52 | -8.615850e-47 |
| Msa0470870 | Msa0546740 | -0.803333 | 3.664804e-49 | -8.615850e-47 |
| Msa0470870 | Msa0612030 | 0.803178 | 3.945403e-49 | -8.615850e-47 |
| Msa0470870 | Msa0619330 | -0.817497 | 3.197804e-52 | -8.615850e-47 |
| Msa0470870 | Msa0659800 | 0.800731 | 1.255856e-48 | -8.615850e-47 |
| Msa0470870 | Msa0681890 | -0.808754 | 2.651650e-50 | -8.615850e-47 |
| Msa0470870 | Msa0693570 | -0.809970 | 1.453822e-50 | -8.615850e-47 |
| Msa0470870 | Msa0694690 | 0.852670 | 3.964084e-61 | -8.615850e-47 |
| Msa0470870 | Msa0703720 | -0.815401 | 9.421738e-52 | -8.615850e-47 |
| Msa0470870 | Msa0725480 | 0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0470870 | Msa0766100 | 0.838557 | 2.680155e-57 | -8.615850e-47 |
| Msa0470870 | Msa0772210 | -0.802605 | 5.183115e-49 | -8.615850e-47 |
| Msa0470870 | Msa0799710 | -0.805430 | 1.339867e-49 | -8.615850e-47 |
| Msa0470870 | Msa0820670 | -0.809767 | 1.608243e-50 | -8.615850e-47 |
| Msa0470870 | Msa0837990 | -0.814120 | 1.811568e-51 | -8.615850e-47 |
| Msa0470870 | Msa0896210 | -0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0470870 | Msa0925160 | -0.816487 | 5.390857e-52 | -8.615850e-47 |
| Msa0470870 | Msa0930330 | -0.815422 | 9.319793e-52 | -8.615850e-47 |
| Msa0470870 | Msa0981010 | -0.816137 | 6.458631e-52 | -8.615850e-47 |
| Msa0470870 | Msa0989490 | 0.803117 | 4.063118e-49 | -8.615850e-47 |
| Msa0470870 | Msa1037060 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0470870 | Msa1147980 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0470870 | Msa1149760 | -0.832297 | 1.024637e-55 | -8.615850e-47 |
| Msa0470870 | Msa1164800 | 0.807450 | 5.023975e-50 | -8.615850e-47 |
| Msa0470870 | Msa1171060 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0470870 | Msa1220450 | 0.818010 | 2.450230e-52 | -8.615850e-47 |
| Msa0470870 | Msa1220460 | 0.820663 | 6.088518e-53 | -8.615850e-47 |
| Msa0470870 | Msa1220480 | 0.819691 | 1.016775e-52 | -8.615850e-47 |
| Msa0470870 | Msa1221570 | 0.812554 | 3.999575e-51 | -8.615850e-47 |
| Msa0470870 | Msa1254770 | -0.806524 | 7.888674e-50 | -8.615850e-47 |
| Msa0470870 | Msa1254800 | -0.809821 | 1.565209e-50 | -8.615850e-47 |
| Msa0470870 | Msa1262310 | -0.806730 | 7.137472e-50 | -8.615850e-47 |
| Msa0470870 | Msa1265820 | 0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0470870 | Msa1332110 | 0.806762 | 7.028987e-50 | -8.615850e-47 |
| Msa0470870 | Msa1332140 | 0.834098 | 3.647398e-56 | -8.615850e-47 |
| Msa0470870 | Msa1354040 | -0.812124 | 4.963418e-51 | -8.615850e-47 |
| Msa0470870 | Msa1357170 | -0.821306 | 4.332047e-53 | -8.615850e-47 |
| Msa0470870 | Msa1418200 | -0.813527 | 2.446403e-51 | -8.615850e-47 |
| Msa0470870 | Msa1428420 | -0.806593 | 7.629850e-50 | -8.615850e-47 |
| Msa0470870 | Msa1439670 | -0.804610 | 1.988509e-49 | -8.615850e-47 |
| Msa0257930 | Msa0470870 | 0.806563 | 7.743025e-50 | -8.615850e-47 |
| Msa0263620 | Msa0470870 | -0.809821 | 1.565779e-50 | -8.615850e-47 |
| Msa0293860 | Msa0470870 | 0.805357 | 1.387946e-49 | -8.615850e-47 |
| Msa0295520 | Msa0470870 | -0.802690 | 4.978491e-49 | -8.615850e-47 |
| Msa0301180 | Msa0470870 | -0.802628 | 5.127393e-49 | -8.615850e-47 |
| Msa0320540 | Msa0470870 | -0.818219 | 2.196805e-52 | -8.615850e-47 |
| Msa0331780 | Msa0470870 | -0.816358 | 5.764198e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470870 | MtrunA17_Chr3g0125541 | 97.830 | 507 | 11 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1016 |
| Msa0470870 | MtrunA17_Chr1g0157701 | 51.105 | 362 | 155 | 6 | 10 | 355 | 7 | 362 | 4.67e-112 | 346 |
| Msa0470870 | MtrunA17_Chr3g0139891 | 57.519 | 266 | 107 | 2 | 10 | 269 | 7 | 272 | 3.96e-102 | 320 |
| Msa0470870 | MtrunA17_Chr7g0244381 | 49.621 | 264 | 129 | 1 | 10 | 269 | 15 | 278 | 3.87e-86 | 280 |
| Msa0470870 | MtrunA17_Chr3g0131021 | 39.721 | 287 | 142 | 3 | 5 | 275 | 2 | 273 | 8.89e-60 | 204 |
| Msa0470870 | MtrunA17_Chr8g0385261 | 40.000 | 265 | 152 | 4 | 5 | 264 | 2 | 264 | 2.03e-56 | 193 |
| Msa0470870 | MtrunA17_Chr5g0395341 | 32.090 | 268 | 172 | 8 | 3 | 264 | 46 | 309 | 3.84e-32 | 127 |
| Msa0470870 | MtrunA17_Chr7g0261361 | 28.819 | 288 | 178 | 9 | 10 | 278 | 43 | 322 | 8.27e-23 | 100 |
| Msa0470870 | MtrunA17_Chr4g0039841 | 31.469 | 286 | 167 | 10 | 3 | 266 | 73 | 351 | 4.57e-21 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470870 | AT1G21380.1 | 58.333 | 528 | 172 | 13 | 1 | 506 | 1 | 502 | 0.0 | 536 |
| Msa0470870 | AT1G76970.2 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.29e-161 | 466 |
| Msa0470870 | AT1G76970.3 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.29e-161 | 466 |
| Msa0470870 | AT1G76970.6 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.29e-161 | 466 |
| Msa0470870 | AT1G76970.1 | 53.320 | 512 | 166 | 12 | 1 | 506 | 1 | 445 | 1.29e-161 | 466 |
| Msa0470870 | AT1G76970.7 | 50.737 | 475 | 161 | 12 | 38 | 506 | 12 | 419 | 3.21e-133 | 393 |
| Msa0470870 | AT1G76970.4 | 50.737 | 475 | 161 | 12 | 38 | 506 | 12 | 419 | 3.21e-133 | 393 |
| Msa0470870 | AT4G32760.3 | 49.133 | 346 | 164 | 4 | 7 | 347 | 4 | 342 | 5.20e-106 | 326 |
| Msa0470870 | AT1G76970.5 | 49.292 | 424 | 142 | 12 | 89 | 506 | 1 | 357 | 7.37e-106 | 320 |
| Msa0470870 | AT4G32760.2 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 4.57e-105 | 328 |
| Msa0470870 | AT4G32760.1 | 49.143 | 350 | 158 | 5 | 7 | 347 | 4 | 342 | 4.95e-105 | 328 |
| Msa0470870 | AT3G08790.1 | 52.060 | 267 | 116 | 3 | 9 | 269 | 6 | 266 | 3.96e-89 | 285 |
| Msa0470870 | AT2G38410.1 | 43.322 | 307 | 126 | 3 | 10 | 268 | 13 | 319 | 9.33e-73 | 244 |
| Msa0470870 | AT5G01760.1 | 42.164 | 268 | 147 | 3 | 9 | 269 | 26 | 292 | 1.92e-63 | 216 |
| Msa0470870 | AT5G63640.1 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 7.87e-63 | 212 |
| Msa0470870 | AT5G63640.2 | 43.494 | 269 | 143 | 3 | 5 | 267 | 2 | 267 | 7.87e-63 | 212 |
| Msa0470870 | AT5G16880.4 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.73e-32 | 127 |
| Msa0470870 | AT5G16880.1 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.73e-32 | 127 |
| Msa0470870 | AT5G16880.2 | 31.970 | 269 | 173 | 8 | 9 | 269 | 52 | 318 | 8.73e-32 | 127 |
| Msa0470870 | AT5G16880.3 | 33.333 | 243 | 152 | 8 | 9 | 244 | 52 | 291 | 1.17e-29 | 118 |
| Msa0470870 | AT1G06210.1 | 27.715 | 267 | 170 | 7 | 9 | 258 | 42 | 302 | 1.41e-21 | 97.1 |
| Msa0470870 | AT1G06210.2 | 30.986 | 142 | 94 | 3 | 9 | 149 | 42 | 180 | 1.09e-13 | 72.0 |
Find 121 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCTGGTTTCTGTTCTT+TGG | 0.175763 | 3_3:+73070409 | None:intergenic |
| ATCTCAATATGACCTATTAT+TGG | 0.203376 | 3_3:+73070328 | None:intergenic |
| CAAGAAGCATGACACGTTTC+TGG | 0.211611 | 3_3:+73071362 | None:intergenic |
| ATATGACCTATTATTGGTTT+TGG | 0.213860 | 3_3:+73070334 | None:intergenic |
| GATGAGTCAGAAGATGATTT+TGG | 0.239011 | 3_3:-73071094 | Msa0470870:CDS |
| ATTTGATGATGCTGCTATTC+AGG | 0.241637 | 3_3:-73073577 | Msa0470870:CDS |
| CTGGTTTCTGTTCTTTGGTT+GGG | 0.252074 | 3_3:+73070414 | None:intergenic |
| CTTCTGACTCATCATCTTCA+TGG | 0.255854 | 3_3:+73071104 | None:intergenic |
| AAGAGACAGCAGCTGTGTTT+TGG | 0.269940 | 3_3:+73074827 | None:intergenic |
| ATTATATGCTGCATAGTATT+GGG | 0.271228 | 3_3:+73074114 | None:intergenic |
| ATAGGCTGTCTGCTATAAAT+TGG | 0.314887 | 3_3:+73070653 | None:intergenic |
| ATTTGCTCATTGGTCCTGAT+TGG | 0.315014 | 3_3:-73075858 | Msa0470870:CDS |
| ATCGAAATCGCTTCTCAATT+CGG | 0.316782 | 3_3:-73076257 | Msa0470870:five_prime_UTR |
| ATAGCGGATGAGGTGGGATT+AGG | 0.317539 | 3_3:+73070722 | None:intergenic |
| GATGCATGGCAAGAAGCTTT+TGG | 0.329126 | 3_3:-73074157 | Msa0470870:CDS |
| TGCATATACCCATATGTATA+TGG | 0.336397 | 3_3:-73070151 | Msa0470870:three_prime_UTR |
| TCCTAAACACAACCACAAAA+TGG | 0.348176 | 3_3:+73070233 | None:intergenic |
| GATATCACCTCGGGGTCTTT+CGG | 0.348200 | 3_3:+73072390 | None:intergenic |
| GGCATCTTTGATGCTGGTGG+TGG | 0.350846 | 3_3:+73070857 | None:intergenic |
| TCTGGTTTCTGTTCTTTGGT+TGG | 0.364136 | 3_3:+73070413 | None:intergenic |
| TTGATTCATTGGAGACGATA+TGG | 0.364861 | 3_3:-73075920 | Msa0470870:exon |
| ATCTTTGATGCTGGTGGTGG+GGG | 0.364963 | 3_3:+73070860 | None:intergenic |
| TGTCTCTGATTATACTTTGA+AGG | 0.370774 | 3_3:+73070542 | None:intergenic |
| TTCGTCTACTGACAGCTTGC+TGG | 0.373432 | 3_3:-73070471 | Msa0470870:CDS |
| CATCCTCCAAAACCAATAAT+AGG | 0.374177 | 3_3:-73070340 | Msa0470870:CDS |
| AAGTATGAACCATATACATA+TGG | 0.387000 | 3_3:+73070142 | None:intergenic |
| ATGAATTGTGAATGTTCATT+TGG | 0.389437 | 3_3:-73070271 | Msa0470870:three_prime_UTR |
| CAGTGGTTCTGAAGTCTTCA+TGG | 0.390162 | 3_3:+73070613 | None:intergenic |
| TAGCGGATGAGGTGGGATTA+GGG | 0.392358 | 3_3:+73070723 | None:intergenic |
| CATTATATGCTGCATAGTAT+TGG | 0.394535 | 3_3:+73074113 | None:intergenic |
| CCAACATAAGCAACAAGAAA+AGG | 0.397411 | 3_3:+73070299 | None:intergenic |
| GCGTGATATATTACACGAAA+TGG | 0.398151 | 3_3:-73074356 | Msa0470870:CDS |
| TCTTTGAAAAGGGCATCTTC+TGG | 0.400879 | 3_3:+73070395 | None:intergenic |
| GCATCTTTGATGCTGGTGGT+GGG | 0.400965 | 3_3:+73070858 | None:intergenic |
| GCGAAAGGAACTGCTAATTC+AGG | 0.408666 | 3_3:-73071172 | Msa0470870:CDS |
| TGGTTTCTGTTCTTTGGTTG+GGG | 0.408861 | 3_3:+73070415 | None:intergenic |
| GCAACCAGTGATTTGCTCAT+TGG | 0.412156 | 3_3:-73075868 | Msa0470870:CDS |
| TTTGCTCATTGGTCCTGATT+GGG | 0.413807 | 3_3:-73075857 | Msa0470870:CDS |
| TCGCAATATTGTCATGTTGA+AGG | 0.414484 | 3_3:+73071191 | None:intergenic |
| AATCAACTAGATCTTTGAAA+AGG | 0.414664 | 3_3:+73070384 | None:intergenic |
| ACATGTACAAGTGGCAGAAC+TGG | 0.424522 | 3_3:+73071130 | None:intergenic |
| TCCCAGGGAGCTGGAGGCAG+TGG | 0.429190 | 3_3:+73070596 | None:intergenic |
| AGTCAGATGCATCCGACCTT+AGG | 0.429675 | 3_3:-73073545 | Msa0470870:intron |
| CATCTTTGATGCTGGTGGTG+GGG | 0.432270 | 3_3:+73070859 | None:intergenic |
| CTCTGATTATACTTTGAAGG+TGG | 0.432987 | 3_3:+73070545 | None:intergenic |
| AGGTAGTAGTGGCATGAGGA+TGG | 0.438987 | 3_3:+73070681 | None:intergenic |
| ATCTGGTTGCAAACAGAGAA+TGG | 0.439921 | 3_3:-73070054 | Msa0470870:three_prime_UTR |
| AACCACTGCCTCCAGCTCCC+TGG | 0.441086 | 3_3:-73070598 | Msa0470870:CDS |
| TTAACAATCGGTTGAGTTTG+AGG | 0.441299 | 3_3:+73073612 | None:intergenic |
| GGAGATGGCTCATCATATAT+AGG | 0.453485 | 3_3:+73070635 | None:intergenic |
| GAAGATAATTAAGAAGCGCT+TGG | 0.458456 | 3_3:-73074862 | Msa0470870:CDS |
| AAGATAATTAAGAAGCGCTT+GGG | 0.476491 | 3_3:-73074861 | Msa0470870:CDS |
| TTTCTGTTCTTTGGTTGGGG+TGG | 0.479671 | 3_3:+73070418 | None:intergenic |
| TTGTAAAGGAGTTGATTCAT+TGG | 0.482903 | 3_3:-73075931 | Msa0470870:five_prime_UTR |
| ATCAACTAGATCTTTGAAAA+GGG | 0.485078 | 3_3:+73070385 | None:intergenic |
| CTCTCTAGGAATAGCGGATG+AGG | 0.485199 | 3_3:+73070712 | None:intergenic |
| GGTTGTGTTTAGGAAGCATT+CGG | 0.486887 | 3_3:-73070224 | Msa0470870:three_prime_UTR |
| TGATTATACTTTGAAGGTGG+GGG | 0.487825 | 3_3:+73070548 | None:intergenic |
| TCAATGTTGATAGCCCAATC+AGG | 0.495239 | 3_3:+73075844 | None:intergenic |
| GCTTGTGTATCCCAGGGAGC+TGG | 0.497061 | 3_3:+73070587 | None:intergenic |
| GACAGGAGCTTGTGTATCCC+AGG | 0.497968 | 3_3:+73070580 | None:intergenic |
| TCTGAAGTCTTCATGGGAGA+TGG | 0.501003 | 3_3:+73070620 | None:intergenic |
| ACCACTGCCTCCAGCTCCCT+GGG | 0.501310 | 3_3:-73070597 | Msa0470870:CDS |
| CAACATAAGCAACAAGAAAA+GGG | 0.506970 | 3_3:+73070300 | None:intergenic |
| TCTGATTATACTTTGAAGGT+GGG | 0.508439 | 3_3:+73070546 | None:intergenic |
| GAGTTCATCCTCACTGACTC+TGG | 0.514966 | 3_3:+73070890 | None:intergenic |
| CTGATTATACTTTGAAGGTG+GGG | 0.515817 | 3_3:+73070547 | None:intergenic |
| TGCAGCATATAATGAACTAA+AGG | 0.517669 | 3_3:-73074104 | Msa0470870:intron |
| TGTTCATTTGGTTTAGCTTG+AGG | 0.520655 | 3_3:-73070259 | Msa0470870:three_prime_UTR |
| GAGATACTCATACACAGATT+CGG | 0.522064 | 3_3:-73070916 | Msa0470870:CDS |
| TCTGCTGCAGAATTAACAAT+CGG | 0.522280 | 3_3:+73073600 | None:intergenic |
| ACACTAACGCATAAAAGAGA+TGG | 0.527995 | 3_3:+73070089 | None:intergenic |
| CGAGGAGCTACAAATGAAGT+TGG | 0.534144 | 3_3:+73070755 | None:intergenic |
| TCGTCTACTGACAGCTTGCT+GGG | 0.535234 | 3_3:-73070470 | Msa0470870:CDS |
| CAAAATATGTCAGGGCGTGA+AGG | 0.535246 | 3_3:-73071425 | Msa0470870:intron |
| TCTTAGTGGTGATGCATACA+AGG | 0.537375 | 3_3:-73070804 | Msa0470870:CDS |
| GGTTCATCTCATTCAAGTAA+TGG | 0.537379 | 3_3:-73070500 | Msa0470870:CDS |
| TCAAAGATGCCAGTCTACTC+TGG | 0.537786 | 3_3:-73070845 | Msa0470870:CDS |
| GTTTGAGGAGGTGTGAAGAA+TGG | 0.551390 | 3_3:+73073627 | None:intergenic |
| CACTAACGCATAAAAGAGAT+GGG | 0.552637 | 3_3:+73070090 | None:intergenic |
| AGTATGAACCATATACATAT+GGG | 0.553633 | 3_3:+73070143 | None:intergenic |
| TAGACTGGCATCTTTGATGC+TGG | 0.555060 | 3_3:+73070851 | None:intergenic |
| GGTTAAGATAGTGAAGAAGC+GGG | 0.556219 | 3_3:-73074335 | Msa0470870:intron |
| TTATATGCTGCATAGTATTG+GGG | 0.557867 | 3_3:+73074115 | None:intergenic |
| AGCACGGTTGACTATCTTAG+TGG | 0.568503 | 3_3:-73070818 | Msa0470870:CDS |
| GGATGGGTTGAAGACTCTCT+AGG | 0.571085 | 3_3:+73070698 | None:intergenic |
| AGGACCAATGAGCAAATCAC+TGG | 0.572265 | 3_3:+73075864 | None:intergenic |
| ACTGGCATCTTTGATGCTGG+TGG | 0.583559 | 3_3:+73070854 | None:intergenic |
| AATTGGTGATGAGGTAGTAG+TGG | 0.585150 | 3_3:+73070670 | None:intergenic |
| CAACATGACAATATTGCGAA+AGG | 0.596738 | 3_3:-73071187 | Msa0470870:CDS |
| ATATCATTAACATGGACCCT+AGG | 0.596855 | 3_3:-73075813 | Msa0470870:intron |
| TCATGGTTTACATGTACAAG+TGG | 0.597818 | 3_3:+73071121 | None:intergenic |
| TAAAAGAAAGAAAGAAAAGT+CGG | 0.597842 | 3_3:-73076360 | Msa0470870:five_prime_UTR |
| CTAGGAATAGCGGATGAGGT+GGG | 0.601814 | 3_3:+73070716 | None:intergenic |
| GTTTCTGGTAAGAACGGCAC+TGG | 0.602167 | 3_3:+73071377 | None:intergenic |
| TCTAGGAATAGCGGATGAGG+TGG | 0.605134 | 3_3:+73070715 | None:intergenic |
| TTATATTTGTAGGCAAGCAA+AGG | 0.605384 | 3_3:-73074892 | Msa0470870:intron |
| AGTGGTTCTGAAGTCTTCAT+GGG | 0.606260 | 3_3:+73070614 | None:intergenic |
| TGGTTAAGATAGTGAAGAAG+CGG | 0.607102 | 3_3:-73074336 | Msa0470870:CDS |
| TGTGTATCCCAGGGAGCTGG+AGG | 0.607755 | 3_3:+73070590 | None:intergenic |
| GTTGAAGGAGTACTCGCTGA+AGG | 0.616029 | 3_3:+73071206 | None:intergenic |
| GGTAGTAGTGGCATGAGGAT+GGG | 0.618700 | 3_3:+73070682 | None:intergenic |
| GTGCTAGTACCAGAGTAGAC+TGG | 0.618718 | 3_3:+73070836 | None:intergenic |
| GGTGATGCATACAAGGCAGA+AGG | 0.619741 | 3_3:-73070797 | Msa0470870:CDS |
| AATATGTCAGGGCGTGAAGG+AGG | 0.620328 | 3_3:-73071422 | Msa0470870:intron |
| TCTGCTATAAATTGGTGATG+AGG | 0.626318 | 3_3:+73070661 | None:intergenic |
| ATGTGAACTAAATACACACA+TGG | 0.633578 | 3_3:+73070195 | None:intergenic |
| TGGTGGAAATTCAACTCCAG+CGG | 0.635802 | 3_3:+73073668 | None:intergenic |
| CTCAGCCGGACTTAAGTGTG+AGG | 0.638020 | 3_3:-73074201 | Msa0470870:intron |
| TGAAGACTCTCTAGGAATAG+CGG | 0.642392 | 3_3:+73070706 | None:intergenic |
| ACAGGAGCTTGTGTATCCCA+GGG | 0.649202 | 3_3:+73070581 | None:intergenic |
| TGACACGTTTCTGGTAAGAA+CGG | 0.650994 | 3_3:+73071371 | None:intergenic |
| ACAATCGGTTGAGTTTGAGG+AGG | 0.657220 | 3_3:+73073615 | None:intergenic |
| AGTCTACTCTGGTACTAGCA+CGG | 0.660902 | 3_3:-73070834 | Msa0470870:CDS |
| TCAGCCGGACTTAAGTGTGA+GGG | 0.669116 | 3_3:-73074200 | Msa0470870:intron |
| TATATGCTGCATAGTATTGG+GGG | 0.675300 | 3_3:+73074116 | None:intergenic |
| ATTGTGTGATATCATTAACA+TGG | 0.682485 | 3_3:-73075821 | Msa0470870:CDS |
| TTCGGAAACCAGAGTCAGTG+AGG | 0.691532 | 3_3:-73070898 | Msa0470870:CDS |
| GATGAGGTAGTAGTGGCATG+AGG | 0.699881 | 3_3:+73070677 | None:intergenic |
| GGATTAGGGCTAGAATGACG+AGG | 0.725632 | 3_3:+73070737 | None:intergenic |
| TTTGAATCCGAAAGACCCCG+AGG | 0.741330 | 3_3:-73072397 | Msa0470870:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGGTTAATAAATAATATT+AGG | - | chr3_3:73071950-73071969 | Msa0470870:intron | 10.0% |
| !! | TAACTAAAACAAATAATTAA+AGG | + | chr3_3:73074416-73074435 | None:intergenic | 10.0% |
| !!! | ATATTTCTTTTTTAAGTTAA+AGG | - | chr3_3:73074478-73074497 | Msa0470870:intron | 10.0% |
| !!! | TGATAATTTGATTTTGTTTT+AGG | - | chr3_3:73070505-73070524 | Msa0470870:CDS | 15.0% |
| !!! | TTCTATCAATTTTAATACTA+TGG | - | chr3_3:73071334-73071353 | Msa0470870:intron | 15.0% |
| !!! | AACCTAAATTTTATGAAAAT+AGG | - | chr3_3:73071393-73071412 | Msa0470870:CDS | 15.0% |
| !!! | TAAATTTTATGAAAATAGGA+GGG | - | chr3_3:73071397-73071416 | Msa0470870:CDS | 15.0% |
| !! | AGAAAGAATAAATTCAAAAA+TGG | + | chr3_3:73071440-73071459 | None:intergenic | 15.0% |
| !! | TATCAAATATTTCATCTATT+TGG | - | chr3_3:73071692-73071711 | Msa0470870:intron | 15.0% |
| !!! | TAAAAAATTATCTTTTTACG+AGG | - | chr3_3:73071806-73071825 | Msa0470870:intron | 15.0% |
| !!! | TAATTTTTTTTACTGTTCAA+TGG | - | chr3_3:73071932-73071951 | Msa0470870:intron | 15.0% |
| !! | TAAATAATATTAGGTGAATT+TGG | - | chr3_3:73071959-73071978 | Msa0470870:intron | 15.0% |
| !!! | AATTTTCTATATTGTATTTG+AGG | + | chr3_3:73072722-73072741 | None:intergenic | 15.0% |
| !!! | ATTATATATTGATAATAGCA+GGG | - | chr3_3:73073016-73073035 | Msa0470870:intron | 15.0% |
| !!! | TGAATTTGAGTTTTATAAAA+GGG | + | chr3_3:73073054-73073073 | None:intergenic | 15.0% |
| !!! | TTGAATTTGAGTTTTATAAA+AGG | + | chr3_3:73073055-73073074 | None:intergenic | 15.0% |
| !! | AACAAAACAAAAAAAAGTAA+AGG | + | chr3_3:73073368-73073387 | None:intergenic | 15.0% |
| !!! | AGTTTAGTTTTTATTGTTTA+TGG | - | chr3_3:73074136-73074155 | Msa0470870:CDS | 15.0% |
| !!! | GTTTAGTTTTTATTGTTTAT+GGG | - | chr3_3:73074137-73074156 | Msa0470870:CDS | 15.0% |
| !!! | TTTAGTTTTTATTGTTTATG+GGG | - | chr3_3:73074138-73074157 | Msa0470870:CDS | 15.0% |
| !!! | TACATTAATTTTGCTAAAAT+GGG | + | chr3_3:73074267-73074286 | None:intergenic | 15.0% |
| !!! | TTACATTAATTTTGCTAAAA+TGG | + | chr3_3:73074268-73074287 | None:intergenic | 15.0% |
| !! | TAAAAGAAAGAAAGAAAAGT+CGG | - | chr3_3:73070101-73070120 | Msa0470870:three_prime_UTR | 20.0% |
| !!! | ATTTTTTATGATGTTATCAG+TGG | - | chr3_3:73070472-73070491 | Msa0470870:CDS | 20.0% |
| !!! | TTTTGTTTTAGGTTTTGTAA+AGG | - | chr3_3:73070516-73070535 | Msa0470870:CDS | 20.0% |
| !!! | CTTTTTTCTCAAGTTATTAT+TGG | + | chr3_3:73070736-73070755 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAAATTCTTGAAA+AGG | - | chr3_3:73070944-73070963 | Msa0470870:intron | 20.0% |
| !! | TTTGTTGAAATTCTTGAAAA+GGG | - | chr3_3:73070945-73070964 | Msa0470870:intron | 20.0% |
| !! | TAAATGTGATACATTAATAG+TGG | + | chr3_3:73070987-73071006 | None:intergenic | 20.0% |
| !! | TTAGTGATAAGATATTAAGA+CGG | - | chr3_3:73071178-73071197 | Msa0470870:CDS | 20.0% |
| !!! | CTCCTATTTTCATAAAATTT+AGG | + | chr3_3:73071398-73071417 | None:intergenic | 20.0% |
| !!! | CTAAATTTTATGAAAATAGG+AGG | - | chr3_3:73071396-73071415 | Msa0470870:CDS | 20.0% |
| !!! | CTTGTTTTTATTTTTCTCAT+GGG | - | chr3_3:73071508-73071527 | Msa0470870:intron | 20.0% |
| !! | TATAATCAGAAAAGATGATT+AGG | + | chr3_3:73071554-73071573 | None:intergenic | 20.0% |
| !!! | TCTTTTCTGATTATATTTGT+AGG | - | chr3_3:73071559-73071578 | Msa0470870:intron | 20.0% |
| !!! | GTGTTATATTCTTTTAATCT+TGG | - | chr3_3:73071664-73071683 | Msa0470870:intron | 20.0% |
| !! | TTTCATCTATTTGGATATAA+TGG | - | chr3_3:73071701-73071720 | Msa0470870:intron | 20.0% |
| !! | TTCATCTATTTGGATATAAT+GGG | - | chr3_3:73071702-73071721 | Msa0470870:intron | 20.0% |
| !! | TTTAACACACTTGATATTAT+TGG | - | chr3_3:73071754-73071773 | Msa0470870:intron | 20.0% |
| !! | AGAGAATAAACTAATAATGA+AGG | - | chr3_3:73071847-73071866 | Msa0470870:intron | 20.0% |
| !! | CAGTAAAAAAAATTACTATG+AGG | + | chr3_3:73071927-73071946 | None:intergenic | 20.0% |
| !!! | TACTTGCATTATTAACTTTT+TGG | - | chr3_3:73072675-73072694 | Msa0470870:intron | 20.0% |
| !!! | CATTATATATTGATAATAGC+AGG | - | chr3_3:73073015-73073034 | Msa0470870:intron | 20.0% |
| !!! | GAATTTGAGTTTTATAAAAG+GGG | + | chr3_3:73073053-73073072 | None:intergenic | 20.0% |
| !!! | CAAATTTTTCATTTTTTGCA+TGG | - | chr3_3:73073090-73073109 | Msa0470870:intron | 20.0% |
| !! | TATAAAAACCAACAATTGAT+CGG | + | chr3_3:73073136-73073155 | None:intergenic | 20.0% |
| !! | GCATTTAATCATATATCTTT+AGG | - | chr3_3:73073304-73073323 | Msa0470870:intron | 20.0% |
| !!! | GAATTAATATGAACATTTTC+TGG | + | chr3_3:73073630-73073649 | None:intergenic | 20.0% |
| !! | AATGTTCATATTAATTCCTT+AGG | - | chr3_3:73073633-73073652 | Msa0470870:CDS | 20.0% |
| !!! | TGTTTTTTTTTCTTCTTCTT+TGG | - | chr3_3:73073678-73073697 | Msa0470870:intron | 20.0% |
| !! | AAACAATAAAAACTAAACTG+AGG | + | chr3_3:73074135-73074154 | None:intergenic | 20.0% |
| !! | TATCTATCAAGAAATTCAAA+AGG | + | chr3_3:73074391-73074410 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTCAGAATATGTT+TGG | - | chr3_3:73074439-73074458 | Msa0470870:intron | 20.0% |
| !!! | TAATTGAGTTGCTTTATTTT+AGG | - | chr3_3:73075191-73075210 | Msa0470870:intron | 20.0% |
| !!! | AATTGAGTTGCTTTATTTTA+GGG | - | chr3_3:73075192-73075211 | Msa0470870:intron | 20.0% |
| !!! | TTTCTTTTATTTGTTGCTTC+TGG | + | chr3_3:73070090-73070109 | None:intergenic | 25.0% |
| !!! | ATACTCAGTTTAAGATTTTG+AGG | + | chr3_3:73070128-73070147 | None:intergenic | 25.0% |
| ! | TGTGAAAATAGAGAAAAAGA+GGG | + | chr3_3:73070242-73070261 | None:intergenic | 25.0% |
| !!! | TATTGTTGTTAAGAGGTTTT+AGG | - | chr3_3:73070335-73070354 | Msa0470870:CDS | 25.0% |
| ! | ATTGTGTGATATCATTAACA+TGG | - | chr3_3:73070640-73070659 | Msa0470870:CDS | 25.0% |
| ! | ATGTGAATTAACAATACCTA+GGG | + | chr3_3:73070667-73070686 | None:intergenic | 25.0% |
| ! | AATGTGAATTAACAATACCT+AGG | + | chr3_3:73070668-73070687 | None:intergenic | 25.0% |
| ! | TCCTTAAATGCAAAAGAAAT+GGG | + | chr3_3:73070891-73070910 | None:intergenic | 25.0% |
| ! | TTGTTGAAATTCTTGAAAAG+GGG | - | chr3_3:73070946-73070965 | Msa0470870:intron | 25.0% |
| !! | AATCAAAGAATTTTTCCAAC+AGG | + | chr3_3:73071229-73071248 | None:intergenic | 25.0% |
| ! | ATATTGCTGCAATTAGAAAT+AGG | - | chr3_3:73071362-73071381 | Msa0470870:CDS | 25.0% |
| ! | TATTGCTGCAATTAGAAATA+GGG | - | chr3_3:73071363-73071382 | Msa0470870:CDS | 25.0% |
| !! | TCTTTCTTTCTTTGTAGTTT+TGG | - | chr3_3:73071457-73071476 | Msa0470870:intron | 25.0% |
| ! | CCATGAGAAAAATAAAAACA+AGG | + | chr3_3:73071510-73071529 | None:intergenic | 25.0% |
| !!! | CCTTGTTTTTATTTTTCTCA+TGG | - | chr3_3:73071507-73071526 | Msa0470870:intron | 25.0% |
| ! | TATGTTAACTTTGTAGAGAA+TGG | + | chr3_3:73071781-73071800 | None:intergenic | 25.0% |
| ! | ACTACTACTAGAATTATTCT+TGG | - | chr3_3:73071877-73071896 | Msa0470870:intron | 25.0% |
| ! | CTACTACTAGAATTATTCTT+GGG | - | chr3_3:73071878-73071897 | Msa0470870:intron | 25.0% |
| !! | TTCATATTTTATGTAGGTAC+TGG | - | chr3_3:73072033-73072052 | Msa0470870:intron | 25.0% |
| !!! | TATGTATTGATTTTTGACAC+TGG | - | chr3_3:73072149-73072168 | Msa0470870:intron | 25.0% |
| ! | TCAAAAATTTAGTTGCAGAA+AGG | + | chr3_3:73072194-73072213 | None:intergenic | 25.0% |
| !!! | TACTGATTTTAATTGATGCA+TGG | - | chr3_3:73072290-73072309 | Msa0470870:intron | 25.0% |
| ! | ATTATATGCTGCATAGTATT+GGG | + | chr3_3:73072350-73072369 | None:intergenic | 25.0% |
| ! | ATATAATGAACTAAAGGTGA+TGG | - | chr3_3:73072363-73072382 | Msa0470870:intron | 25.0% |
| ! | AAAAATATAATGATGACCAC+AGG | + | chr3_3:73072593-73072612 | None:intergenic | 25.0% |
| !! | TGGTCATCATTATATTTTTC+TGG | - | chr3_3:73072594-73072613 | Msa0470870:intron | 25.0% |
| !!! | TTGTTGCTTTTTGAATTAAC+AGG | - | chr3_3:73072770-73072789 | Msa0470870:intron | 25.0% |
| ! | CAAAATAAACAAGTGTATGA+TGG | + | chr3_3:73072955-73072974 | None:intergenic | 25.0% |
| !!! | TTATTTTGTGTTTGTTGTGT+AGG | - | chr3_3:73072967-73072986 | Msa0470870:intron | 25.0% |
| !!! | TATTTTGTGTTTGTTGTGTA+GGG | - | chr3_3:73072968-73072987 | Msa0470870:intron | 25.0% |
| ! | ATATTATGTCTCACAGTAAA+TGG | + | chr3_3:73073236-73073255 | None:intergenic | 25.0% |
| ! | AACAAAAAAAAGTAAAGGCA+AGG | + | chr3_3:73073363-73073382 | None:intergenic | 25.0% |
| !! | TTTTCCTACCTAGTTAAATA+TGG | - | chr3_3:73073394-73073413 | Msa0470870:intron | 25.0% |
| !!! | TGATTTTTTCTTCATAGAGT+TGG | - | chr3_3:73073432-73073451 | Msa0470870:intron | 25.0% |
| !! | AATTTCTCACAATTTTCTAC+AGG | - | chr3_3:73073455-73073474 | Msa0470870:intron | 25.0% |
| !! | CTAATAGTAGAATGGTATTT+TGG | - | chr3_3:73073566-73073585 | Msa0470870:CDS | 25.0% |
| ! | TAGAGATTAAAAATGCTCAA+GGG | - | chr3_3:73074009-73074028 | Msa0470870:intron | 25.0% |
| !!! | ACTTTAAAGTTGCTGTATTT+TGG | - | chr3_3:73074174-73074193 | Msa0470870:CDS | 25.0% |
| ! | TTAGCAAAATTAATGTAAGC+TGG | - | chr3_3:73074270-73074289 | Msa0470870:intron | 25.0% |
| ! | ATCTTCCTGTAATACAATAT+TGG | - | chr3_3:73074889-73074908 | Msa0470870:intron | 25.0% |
| ! | TAGATCCAATATTGTATTAC+AGG | + | chr3_3:73074897-73074916 | None:intergenic | 25.0% |
| ! | GTAATTAATAACACCAGTAA+TGG | - | chr3_3:73075167-73075186 | Msa0470870:intron | 25.0% |
| !! | AATATAACACGAGAACTTTT+GGG | + | chr3_3:73075413-73075432 | None:intergenic | 25.0% |
| !! | TAATATAACACGAGAACTTT+TGG | + | chr3_3:73075414-73075433 | None:intergenic | 25.0% |
| ! | GATTTCAATACTGTAATTTC+AGG | - | chr3_3:73075515-73075534 | Msa0470870:intron | 25.0% |
| !! | ATCAACTAGATCTTTGAAAA+GGG | + | chr3_3:73076079-73076098 | None:intergenic | 25.0% |
| !! | AATCAACTAGATCTTTGAAA+AGG | + | chr3_3:73076080-73076099 | None:intergenic | 25.0% |
| !!! | ATATGACCTATTATTGGTTT+TGG | + | chr3_3:73076130-73076149 | None:intergenic | 25.0% |
| ! | ATCTCAATATGACCTATTAT+TGG | + | chr3_3:73076136-73076155 | None:intergenic | 25.0% |
| ! | ATGAATTGTGAATGTTCATT+TGG | - | chr3_3:73076190-73076209 | Msa0470870:intron | 25.0% |
| ! | AGTATGAACCATATACATAT+GGG | + | chr3_3:73076321-73076340 | None:intergenic | 25.0% |
| ! | AAGTATGAACCATATACATA+TGG | + | chr3_3:73076322-73076341 | None:intergenic | 25.0% |
| !! | AGTGTTTTCTTCAAATAATC+TGG | - | chr3_3:73076390-73076409 | Msa0470870:five_prime_UTR | 25.0% |
| CTGTGAAAATAGAGAAAAAG+AGG | + | chr3_3:73070243-73070262 | None:intergenic | 30.0% | |
| ! | TTTCTCTATTTTCACAGCTA+AGG | - | chr3_3:73070246-73070265 | Msa0470870:three_prime_UTR | 30.0% |
| CGATCGATGATATAATAGAA+GGG | + | chr3_3:73070299-73070318 | None:intergenic | 30.0% | |
| TCGATCGATGATATAATAGA+AGG | + | chr3_3:73070300-73070319 | None:intergenic | 30.0% | |
| AATAGATCGAATTTGAGTGA+TGG | + | chr3_3:73070378-73070397 | None:intergenic | 30.0% | |
| AGTCAACTCAATAAGAATAG+AGG | + | chr3_3:73070411-73070430 | None:intergenic | 30.0% | |
| ! | TTGTAAAGGAGTTGATTCAT+TGG | - | chr3_3:73070530-73070549 | Msa0470870:CDS | 30.0% |
| !! | TTTGAAGCTTGCTATGTTAT+GGG | - | chr3_3:73070817-73070836 | Msa0470870:CDS | 30.0% |
| ! | TCCCATTTCTTTTGCATTTA+AGG | - | chr3_3:73070887-73070906 | Msa0470870:CDS | 30.0% |
| CTCCTTAAATGCAAAAGAAA+TGG | + | chr3_3:73070892-73070911 | None:intergenic | 30.0% | |
| AGAATTTCAACAAAACCCAT+AGG | + | chr3_3:73070939-73070958 | None:intergenic | 30.0% | |
| TGTTGAAATTCTTGAAAAGG+GGG | - | chr3_3:73070947-73070966 | Msa0470870:intron | 30.0% | |
| !!! | AGTACTCGTCTTTTTTGATT+TGG | - | chr3_3:73071010-73071029 | Msa0470870:intron | 30.0% |
| !!! | TTTTTTGATTTGGACATGTG+CGG | - | chr3_3:73071020-73071039 | Msa0470870:intron | 30.0% |
| TTATATTTGTAGGCAAGCAA+AGG | - | chr3_3:73071569-73071588 | Msa0470870:intron | 30.0% | |
| !! | AAGATAATTAAGAAGCGCTT+GGG | - | chr3_3:73071600-73071619 | Msa0470870:intron | 30.0% |
| ! | GGACACTTCATATTTTATGT+AGG | - | chr3_3:73072027-73072046 | Msa0470870:intron | 30.0% |
| !!! | TTCACCGCAATTTTTAGTAA+GGG | + | chr3_3:73072062-73072081 | None:intergenic | 30.0% |
| !!! | TTTCACCGCAATTTTTAGTA+AGG | + | chr3_3:73072063-73072082 | None:intergenic | 30.0% |
| !! | CTGCAACTAAATTTTTGAAG+AGG | - | chr3_3:73072196-73072215 | Msa0470870:intron | 30.0% |
| ! | TTTTAATCTAATTGCTCAGC+CGG | - | chr3_3:73072246-73072265 | Msa0470870:intron | 30.0% |
| TTATATGCTGCATAGTATTG+GGG | + | chr3_3:73072349-73072368 | None:intergenic | 30.0% | |
| CATTATATGCTGCATAGTAT+TGG | + | chr3_3:73072351-73072370 | None:intergenic | 30.0% | |
| TGCAGCATATAATGAACTAA+AGG | - | chr3_3:73072357-73072376 | Msa0470870:intron | 30.0% | |
| TAAACAGCAACATTTATCAC+AGG | + | chr3_3:73072487-73072506 | None:intergenic | 30.0% | |
| !! | AAATGTTGCTGTTTACATAC+TGG | - | chr3_3:73072492-73072511 | Msa0470870:intron | 30.0% |
| !!! | TTCTGGTATTTTTAGTAAGC+TGG | - | chr3_3:73072611-73072630 | Msa0470870:intron | 30.0% |
| GTATGCACTTGTACAATTAA+TGG | + | chr3_3:73072641-73072660 | None:intergenic | 30.0% | |
| ! | CTATATTGTATTTGAGGTGA+AGG | + | chr3_3:73072716-73072735 | None:intergenic | 30.0% |
| ! | TGATAATAGCAGGGTATTTA+AGG | - | chr3_3:73073025-73073044 | Msa0470870:intron | 30.0% |
| ATAATATGCAGATTCCATAG+CGG | - | chr3_3:73073249-73073268 | Msa0470870:intron | 30.0% | |
| AGATAAGTAGGTAAACATGT+AGG | + | chr3_3:73073281-73073300 | None:intergenic | 30.0% | |
| ATTAAATGCTGCAGATAAGT+AGG | + | chr3_3:73073293-73073312 | None:intergenic | 30.0% | |
| CATTCCATATTTAACTAGGT+AGG | + | chr3_3:73073401-73073420 | None:intergenic | 30.0% | |
| CTACCTAGTTAAATATGGAA+TGG | - | chr3_3:73073399-73073418 | Msa0470870:intron | 30.0% | |
| TCTCCATTCCATATTTAACT+AGG | + | chr3_3:73073405-73073424 | None:intergenic | 30.0% | |
| ATTATGGAGGAAATGAAACA+TGG | + | chr3_3:73073514-73073533 | None:intergenic | 30.0% | |
| ATACCATTCTACTATTAGAC+AGG | + | chr3_3:73073564-73073583 | None:intergenic | 30.0% | |
| ATTCATGTGTTGAACAGTAA+GGG | - | chr3_3:73073701-73073720 | Msa0470870:intron | 30.0% | |
| !! | TTAAGGTGGACTAATAACAA+GGG | + | chr3_3:73073802-73073821 | None:intergenic | 30.0% |
| TATAAACGAATAACTTCGAC+AGG | + | chr3_3:73073917-73073936 | None:intergenic | 30.0% | |
| AAAAAATAGTCAGAGAGAGA+GGG | + | chr3_3:73073970-73073989 | None:intergenic | 30.0% | |
| TAAAAAATAGTCAGAGAGAG+AGG | + | chr3_3:73073971-73073990 | None:intergenic | 30.0% | |
| CTAGAGATTAAAAATGCTCA+AGG | - | chr3_3:73074008-73074027 | Msa0470870:intron | 30.0% | |
| ATGAAAAGATGATATCACCT+CGG | + | chr3_3:73074084-73074103 | None:intergenic | 30.0% | |
| ACTAGCAGAAAATGAAAACA+TGG | + | chr3_3:73074203-73074222 | None:intergenic | 30.0% | |
| CAAAATTAATGTAAGCTGGT+TGG | - | chr3_3:73074274-73074293 | Msa0470870:intron | 30.0% | |
| TTTATCGTGTCAATCTTTCA+AGG | - | chr3_3:73074557-73074576 | Msa0470870:intron | 30.0% | |
| TTGTATTACAGGAAGATTGA+AGG | + | chr3_3:73074886-73074905 | None:intergenic | 30.0% | |
| !! | GTTGCTGTTTCTTAATATTC+TGG | - | chr3_3:73075012-73075031 | Msa0470870:intron | 30.0% |
| TATTCTGGACAAAATATGTC+AGG | - | chr3_3:73075027-73075046 | Msa0470870:intron | 30.0% | |
| ATTCTGGACAAAATATGTCA+GGG | - | chr3_3:73075028-73075047 | Msa0470870:intron | 30.0% | |
| ACTGTAAAATCACTACAACT+AGG | + | chr3_3:73075486-73075505 | None:intergenic | 30.0% | |
| ! | TCTGATTATACTTTGAAGGT+GGG | + | chr3_3:73075918-73075937 | None:intergenic | 30.0% |
| TGTCTCTGATTATACTTTGA+AGG | + | chr3_3:73075922-73075941 | None:intergenic | 30.0% | |
| CAACATAAGCAACAAGAAAA+GGG | + | chr3_3:73076164-73076183 | None:intergenic | 30.0% | |
| ATGTGAACTAAATACACACA+TGG | + | chr3_3:73076269-73076288 | None:intergenic | 30.0% | |
| TGCATATACCCATATGTATA+TGG | - | chr3_3:73076310-73076329 | Msa0470870:five_prime_UTR | 30.0% | |
| ATCGAAATCGCTTCTCAATT+CGG | - | chr3_3:73070204-73070223 | Msa0470870:three_prime_UTR | 35.0% | |
| ! | TCTCTGCTATTGTTGTTAAG+AGG | - | chr3_3:73070328-73070347 | Msa0470870:exon | 35.0% |
| TTGATTCATTGGAGACGATA+TGG | - | chr3_3:73070541-73070560 | Msa0470870:CDS | 35.0% | |
| ATATCATTAACATGGACCCT+AGG | - | chr3_3:73070648-73070667 | Msa0470870:CDS | 35.0% | |
| !! | CTTTGAAGCTTGCTATGTTA+TGG | - | chr3_3:73070816-73070835 | Msa0470870:CDS | 35.0% |
| TGGAGAACAATCCAATAGTT+AGG | - | chr3_3:73071083-73071102 | Msa0470870:CDS | 35.0% | |
| AAAGGTCCAACCAATTAAGA+AGG | - | chr3_3:73071122-73071141 | Msa0470870:CDS | 35.0% | |
| ACTTTCAAGGCCTTCTTAAT+TGG | + | chr3_3:73071135-73071154 | None:intergenic | 35.0% | |
| TTTATGAAAATAGGAGGGCT+AGG | - | chr3_3:73071402-73071421 | Msa0470870:CDS | 35.0% | |
| !! | GAAGATAATTAAGAAGCGCT+TGG | - | chr3_3:73071599-73071618 | Msa0470870:intron | 35.0% |
| GAATTTGGAAATATTCGTGC+AGG | - | chr3_3:73071974-73071993 | Msa0470870:intron | 35.0% | |
| GAAATAGTGATTACCTGACA+TGG | - | chr3_3:73072006-73072025 | Msa0470870:intron | 35.0% | |
| ! | AAATATGAAGTGTCCATGTC+AGG | + | chr3_3:73072022-73072041 | None:intergenic | 35.0% |
| GAGACCCTTACTAAAAATTG+CGG | - | chr3_3:73072055-73072074 | Msa0470870:intron | 35.0% | |
| GCGTGATATATTACACGAAA+TGG | - | chr3_3:73072105-73072124 | Msa0470870:intron | 35.0% | |
| TGGTTAAGATAGTGAAGAAG+CGG | - | chr3_3:73072125-73072144 | Msa0470870:intron | 35.0% | |
| ! | ATTTAGTTGCAGAAAGGCAT+TGG | + | chr3_3:73072188-73072207 | None:intergenic | 35.0% |
| ! | TATATGCTGCATAGTATTGG+GGG | + | chr3_3:73072348-73072367 | None:intergenic | 35.0% |
| TACAAAAATCTGCTTCAGAC+TGG | + | chr3_3:73072536-73072555 | None:intergenic | 35.0% | |
| ! | ACACTATTTTCTTCTCTTGG+TGG | + | chr3_3:73072813-73072832 | None:intergenic | 35.0% |
| TTAACAATCGGTTGAGTTTG+AGG | + | chr3_3:73072852-73072871 | None:intergenic | 35.0% | |
| TCTGCTGCAGAATTAACAAT+CGG | + | chr3_3:73072864-73072883 | None:intergenic | 35.0% | |
| !! | ATTTGATGATGCTGCTATTC+AGG | - | chr3_3:73072884-73072903 | Msa0470870:intron | 35.0% |
| TGCATGGTCAAAAATCACAA+TGG | - | chr3_3:73073106-73073125 | Msa0470870:intron | 35.0% | |
| GCATGGTCAAAAATCACAAT+GGG | - | chr3_3:73073107-73073126 | Msa0470870:intron | 35.0% | |
| CATGTGCAATGACATGTAAA+TGG | + | chr3_3:73073163-73073182 | None:intergenic | 35.0% | |
| AAGGCAGACACTCATAATTA+TGG | + | chr3_3:73073530-73073549 | None:intergenic | 35.0% | |
| TAGACAGGAGAAATATCGAA+AGG | + | chr3_3:73073549-73073568 | None:intergenic | 35.0% | |
| TCTCCTGTCTAATAGTAGAA+TGG | - | chr3_3:73073558-73073577 | Msa0470870:CDS | 35.0% | |
| GATTCATGTGTTGAACAGTA+AGG | - | chr3_3:73073700-73073719 | Msa0470870:intron | 35.0% | |
| !! | TAAGGTGGACTAATAACAAG+GGG | + | chr3_3:73073801-73073820 | None:intergenic | 35.0% |
| !! | CTTAAGGTGGACTAATAACA+AGG | + | chr3_3:73073803-73073822 | None:intergenic | 35.0% |
| !! | CTTGTTATTAGTCCACCTTA+AGG | - | chr3_3:73073801-73073820 | Msa0470870:intron | 35.0% |
| GACGAGTACAAAAAACAAAC+TGG | + | chr3_3:73073889-73073908 | None:intergenic | 35.0% | |
| TGAAAAGATGATATCACCTC+GGG | + | chr3_3:73074083-73074102 | None:intergenic | 35.0% | |
| GGTAAGCGATTGAACATAAA+TGG | + | chr3_3:73074114-73074133 | None:intergenic | 35.0% | |
| TGTTGTGCATTATGGAATTC+TGG | - | chr3_3:73074228-73074247 | Msa0470870:intron | 35.0% | |
| !!! | TCATGCCTTTTTTTCTATGC+TGG | - | chr3_3:73074334-73074353 | Msa0470870:intron | 35.0% |
| ! | TCTGCTGAAATGTGTCTTTT+TGG | - | chr3_3:73074358-73074377 | Msa0470870:CDS | 35.0% |
| TCAGAATATGTTTGGACAGA+GGG | - | chr3_3:73074447-73074466 | Msa0470870:intron | 35.0% | |
| !! | TTAGGAGTTGGATTTTAGAG+AGG | + | chr3_3:73074634-73074653 | None:intergenic | 35.0% |
| ! | CACTTACTAAGGGTATGTTT+AGG | + | chr3_3:73074652-73074671 | None:intergenic | 35.0% |
| AACATACCCTTAGTAAGTGA+AGG | - | chr3_3:73074653-73074672 | Msa0470870:intron | 35.0% | |
| ACATACCCTTAGTAAGTGAA+GGG | - | chr3_3:73074654-73074673 | Msa0470870:intron | 35.0% | |
| !! | TTAGAGTGACAGTTTTGTAC+TGG | + | chr3_3:73074992-73075011 | None:intergenic | 35.0% |
| GCAACTCAATTAACCATTAC+TGG | + | chr3_3:73075183-73075202 | None:intergenic | 35.0% | |
| !!! | GTTGCTTTATTTTAGGGATG+AGG | - | chr3_3:73075198-73075217 | Msa0470870:intron | 35.0% |
| TCGCAATATTGTCATGTTGA+AGG | + | chr3_3:73075273-73075292 | None:intergenic | 35.0% | |
| CAACATGACAATATTGCGAA+AGG | - | chr3_3:73075274-73075293 | Msa0470870:intron | 35.0% | |
| TCATGGTTTACATGTACAAG+TGG | + | chr3_3:73075343-73075362 | None:intergenic | 35.0% | |
| ! | GATGAGTCAGAAGATGATTT+TGG | - | chr3_3:73075367-73075386 | Msa0470870:intron | 35.0% |
| !! | ATTTTGGTCAATTAGCCCAT+AGG | - | chr3_3:73075383-73075402 | Msa0470870:intron | 35.0% |
| TTCATCTTGCTCTTTCTTCT+TGG | - | chr3_3:73075457-73075476 | Msa0470870:intron | 35.0% | |
| GAGATACTCATACACAGATT+CGG | - | chr3_3:73075545-73075564 | Msa0470870:intron | 35.0% | |
| !!! | AGTTGGTTCTGAGTTTTCAA+GGG | + | chr3_3:73075692-73075711 | None:intergenic | 35.0% |
| !!! | AAGTTGGTTCTGAGTTTTCA+AGG | + | chr3_3:73075693-73075712 | None:intergenic | 35.0% |
| !! | TCTGCTATAAATTGGTGATG+AGG | + | chr3_3:73075803-73075822 | None:intergenic | 35.0% |
| ATAGGCTGTCTGCTATAAAT+TGG | + | chr3_3:73075811-73075830 | None:intergenic | 35.0% | |
| ! | TGATTATACTTTGAAGGTGG+GGG | + | chr3_3:73075916-73075935 | None:intergenic | 35.0% |
| ! | CTGATTATACTTTGAAGGTG+GGG | + | chr3_3:73075917-73075936 | None:intergenic | 35.0% |
| ! | CTCTGATTATACTTTGAAGG+TGG | + | chr3_3:73075919-73075938 | None:intergenic | 35.0% |
| !!! | CAACAGTTTTTTGAGCAACA+AGG | - | chr3_3:73075940-73075959 | Msa0470870:intron | 35.0% |
| GGTTCATCTCATTCAAGTAA+TGG | - | chr3_3:73075961-73075980 | Msa0470870:intron | 35.0% | |
| !! | ATCTTCTGGTTTCTGTTCTT+TGG | + | chr3_3:73076055-73076074 | None:intergenic | 35.0% |
| CATCCTCCAAAACCAATAAT+AGG | - | chr3_3:73076121-73076140 | Msa0470870:intron | 35.0% | |
| !!! | TGACCTATTATTGGTTTTGG+AGG | + | chr3_3:73076127-73076146 | None:intergenic | 35.0% |
| CCAACATAAGCAACAAGAAA+AGG | + | chr3_3:73076165-73076184 | None:intergenic | 35.0% | |
| !! | CCTTTTCTTGTTGCTTATGT+TGG | - | chr3_3:73076162-73076181 | Msa0470870:intron | 35.0% |
| !! | TGTTCATTTGGTTTAGCTTG+AGG | - | chr3_3:73076202-73076221 | Msa0470870:intron | 35.0% |
| ! | TCCATTTTGTGGTTGTGTTT+AGG | - | chr3_3:73076227-73076246 | Msa0470870:five_prime_UTR | 35.0% |
| TCCTAAACACAACCACAAAA+TGG | + | chr3_3:73076231-73076250 | None:intergenic | 35.0% | |
| CACTAACGCATAAAAGAGAT+GGG | + | chr3_3:73076374-73076393 | None:intergenic | 35.0% | |
| ACACTAACGCATAAAAGAGA+TGG | + | chr3_3:73076375-73076394 | None:intergenic | 35.0% | |
| ATTTGCTCATTGGTCCTGAT+TGG | - | chr3_3:73070603-73070622 | Msa0470870:CDS | 40.0% | |
| TTTGCTCATTGGTCCTGATT+GGG | - | chr3_3:73070604-73070623 | Msa0470870:CDS | 40.0% | |
| !! | TCAATGTTGATAGCCCAATC+AGG | + | chr3_3:73070620-73070639 | None:intergenic | 40.0% |
| CAATCCAATAGTTAGGCAGA+AGG | - | chr3_3:73071090-73071109 | Msa0470870:CDS | 40.0% | |
| ATCTCCTTCTGCCTAACTAT+TGG | + | chr3_3:73071097-73071116 | None:intergenic | 40.0% | |
| TCAAGGCCTTCTTAATTGGT+TGG | + | chr3_3:73071131-73071150 | None:intergenic | 40.0% | |
| ATGTAGACCACGTACTTTCA+AGG | + | chr3_3:73071148-73071167 | None:intergenic | 40.0% | |
| TGTCTCTTGAATGCCAATAC+AGG | - | chr3_3:73071275-73071294 | Msa0470870:intron | 40.0% | |
| GTCTCTTGAATGCCAATACA+GGG | - | chr3_3:73071276-73071295 | Msa0470870:intron | 40.0% | |
| TCTACTGCTGACATGACTAT+TGG | + | chr3_3:73071302-73071321 | None:intergenic | 40.0% | |
| TTTGGAAATATTCGTGCAGG+AGG | - | chr3_3:73071977-73071996 | Msa0470870:intron | 40.0% | |
| GGTTAAGATAGTGAAGAAGC+GGG | - | chr3_3:73072126-73072145 | Msa0470870:intron | 40.0% | |
| ! | TTTTCCCTCACACTTAAGTC+CGG | + | chr3_3:73072268-73072287 | None:intergenic | 40.0% |
| ! | TTTTTGAATTAACAGGCCGC+TGG | - | chr3_3:73072777-73072796 | Msa0470870:intron | 40.0% |
| ! | GGCACACTATTTTCTTCTCT+TGG | + | chr3_3:73072816-73072835 | None:intergenic | 40.0% |
| !! | GTAAAAAGAGCACCTAAGGT+CGG | + | chr3_3:73072931-73072950 | None:intergenic | 40.0% |
| !! | TGGAGTAAAAAGAGCACCTA+AGG | + | chr3_3:73072935-73072954 | None:intergenic | 40.0% |
| !! | TGTTTGTTGTGTAGGGCTAA+TGG | - | chr3_3:73072975-73072994 | Msa0470870:intron | 40.0% |
| ATGGGAATCCGATCAATTGT+TGG | - | chr3_3:73073125-73073144 | Msa0470870:intron | 40.0% | |
| GCAGACACTCATAATTATGG+AGG | + | chr3_3:73073527-73073546 | None:intergenic | 40.0% | |
| !! | GTTGAACAGTAAGGGTGTTT+AGG | - | chr3_3:73073709-73073728 | Msa0470870:intron | 40.0% |
| TTCCACATGGGGTAATCTTA+AGG | - | chr3_3:73073732-73073751 | Msa0470870:intron | 40.0% | |
| TCCACATGGGGTAATCTTAA+GGG | - | chr3_3:73073733-73073752 | Msa0470870:intron | 40.0% | |
| TTAAGGGTTCATCCCTCATA+TGG | - | chr3_3:73073749-73073768 | Msa0470870:intron | 40.0% | |
| TAAGGGTTCATCCCTCATAT+GGG | - | chr3_3:73073750-73073769 | Msa0470870:intron | 40.0% | |
| AAACGAATAACTTCGACAGG+AGG | + | chr3_3:73073914-73073933 | None:intergenic | 40.0% | |
| GAGAGATAAAGTAAAGCTGG+TGG | + | chr3_3:73073948-73073967 | None:intergenic | 40.0% | |
| AGGGAGAGATAAAGTAAAGC+TGG | + | chr3_3:73073951-73073970 | None:intergenic | 40.0% | |
| GATTAAAAATGCTCAAGGGC+TGG | - | chr3_3:73074013-73074032 | Msa0470870:intron | 40.0% | |
| GAAAAGATGATATCACCTCG+GGG | + | chr3_3:73074082-73074101 | None:intergenic | 40.0% | |
| AGTCGATGTGTTGTGCATTA+TGG | - | chr3_3:73074220-73074239 | Msa0470870:intron | 40.0% | |
| CATTATGGAATTCTGGACCT+GGG | - | chr3_3:73074235-73074254 | Msa0470870:intron | 40.0% | |
| GCTAAAATGGGATAAATCCC+AGG | + | chr3_3:73074255-73074274 | None:intergenic | 40.0% | |
| CAGAGCCAGCATAGAAAAAA+AGG | + | chr3_3:73074342-73074361 | None:intergenic | 40.0% | |
| GTCAGAATATGTTTGGACAG+AGG | - | chr3_3:73074446-73074465 | Msa0470870:intron | 40.0% | |
| CAGAATATGTTTGGACAGAG+GGG | - | chr3_3:73074448-73074467 | Msa0470870:intron | 40.0% | |
| ! | TCGGAGGGAAGTCTATATTT+TGG | + | chr3_3:73074605-73074624 | None:intergenic | 40.0% |
| !! | GAGTTGGATTTTAGAGAGGA+CGG | + | chr3_3:73074630-73074649 | None:intergenic | 40.0% |
| ! | CTAAGGGTATGTTTAGGAGT+TGG | + | chr3_3:73074646-73074665 | None:intergenic | 40.0% |
| CATACCCTTAGTAAGTGAAG+GGG | - | chr3_3:73074655-73074674 | Msa0470870:intron | 40.0% | |
| CTAACCCCTTCACTTACTAA+GGG | + | chr3_3:73074662-73074681 | None:intergenic | 40.0% | |
| AGGAGGTGAGGTCTATTATT+AGG | - | chr3_3:73074680-73074699 | Msa0470870:intron | 40.0% | |
| TGACTCAGAATTGTTAGGAG+AGG | - | chr3_3:73074733-73074752 | Msa0470870:intron | 40.0% | |
| TCAGAATTGTTAGGAGAGGT+TGG | - | chr3_3:73074737-73074756 | Msa0470870:intron | 40.0% | |
| ACTCTATCAAGATTCGAGAG+TGG | + | chr3_3:73074763-73074782 | None:intergenic | 40.0% | |
| CTTGATAGAGTTGCACACAA+AGG | - | chr3_3:73074772-73074791 | Msa0470870:intron | 40.0% | |
| CTAGAAACTCCTTCATGTGT+AGG | + | chr3_3:73074851-73074870 | None:intergenic | 40.0% | |
| AAACGTTCCTTGCAAAATGC+AGG | - | chr3_3:73074920-73074939 | Msa0470870:intron | 40.0% | |
| ! | TCTTAGTCCTGCATTTTGCA+AGG | + | chr3_3:73074930-73074949 | None:intergenic | 40.0% |
| !! | TGACACGTTTCTGGTAAGAA+CGG | + | chr3_3:73075093-73075112 | None:intergenic | 40.0% |
| ! | TTTAGGGATGAGGAGCTTTT+AGG | - | chr3_3:73075208-73075227 | Msa0470870:intron | 40.0% |
| CTTCTGACTCATCATCTTCA+TGG | + | chr3_3:73075360-73075379 | None:intergenic | 40.0% | |
| !!! | GAACTTTTGGGTTCACCTAT+GGG | + | chr3_3:73075401-73075420 | None:intergenic | 40.0% |
| !!! | AGAACTTTTGGGTTCACCTA+TGG | + | chr3_3:73075402-73075421 | None:intergenic | 40.0% |
| ! | TCTTAGTGGTGATGCATACA+AGG | - | chr3_3:73075657-73075676 | Msa0470870:intron | 40.0% |
| ! | TGAAGACTCTCTAGGAATAG+CGG | + | chr3_3:73075758-73075777 | None:intergenic | 40.0% |
| !! | AATTGGTGATGAGGTAGTAG+TGG | + | chr3_3:73075794-73075813 | None:intergenic | 40.0% |
| GGAGATGGCTCATCATATAT+AGG | + | chr3_3:73075829-73075848 | None:intergenic | 40.0% | |
| !! | AGTGGTTCTGAAGTCTTCAT+GGG | + | chr3_3:73075850-73075869 | None:intergenic | 40.0% |
| TGGTTTCTGTTCTTTGGTTG+GGG | + | chr3_3:73076049-73076068 | None:intergenic | 40.0% | |
| CTGGTTTCTGTTCTTTGGTT+GGG | + | chr3_3:73076050-73076069 | None:intergenic | 40.0% | |
| ! | TCTGGTTTCTGTTCTTTGGT+TGG | + | chr3_3:73076051-73076070 | None:intergenic | 40.0% |
| !! | TCTTTGAAAAGGGCATCTTC+TGG | + | chr3_3:73076069-73076088 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTGGAGGATGAAG+AGG | + | chr3_3:73076118-73076137 | None:intergenic | 40.0% |
| !! | GGTTGTGTTTAGGAAGCATT+CGG | - | chr3_3:73076237-73076256 | Msa0470870:five_prime_UTR | 40.0% |
| ATCTGGTTGCAAACAGAGAA+TGG | - | chr3_3:73076407-73076426 | Msa0470870:five_prime_UTR | 40.0% | |
| AGAAGGGAACGAAGATGAGA+GGG | + | chr3_3:73070283-73070302 | None:intergenic | 45.0% | |
| TAGAAGGGAACGAAGATGAG+AGG | + | chr3_3:73070284-73070303 | None:intergenic | 45.0% | |
| !! | GCAACCAGTGATTTGCTCAT+TGG | - | chr3_3:73070593-73070612 | Msa0470870:CDS | 45.0% |
| AGGACCAATGAGCAAATCAC+TGG | + | chr3_3:73070600-73070619 | None:intergenic | 45.0% | |
| CAACAAAACCCATAGGACCT+GGG | + | chr3_3:73070932-73070951 | None:intergenic | 45.0% | |
| TCAACAAAACCCATAGGACC+TGG | + | chr3_3:73070933-73070952 | None:intergenic | 45.0% | |
| ATTCTTGAAAAGGGGGTCGA+TGG | - | chr3_3:73070954-73070973 | Msa0470870:intron | 45.0% | |
| TTCTTGAAAAGGGGGTCGAT+GGG | - | chr3_3:73070955-73070974 | Msa0470870:intron | 45.0% | |
| ATTAAGGAGGGTAGGTCATG+TGG | - | chr3_3:73071063-73071082 | Msa0470870:intron | 45.0% | |
| GGCAGAAGGAGATTGAGAAA+AGG | - | chr3_3:73071104-73071123 | Msa0470870:CDS | 45.0% | |
| ! | AAGAAGGCCTTGAAAGTACG+TGG | - | chr3_3:73071138-73071157 | Msa0470870:CDS | 45.0% |
| ATGTAGCTAACTCTGCCTGT+TGG | - | chr3_3:73071211-73071230 | Msa0470870:CDS | 45.0% | |
| CATGACTATTGGCCCTGTAT+TGG | + | chr3_3:73071291-73071310 | None:intergenic | 45.0% | |
| AGTCATGTCAGCAGTAGATG+AGG | - | chr3_3:73071304-73071323 | Msa0470870:intron | 45.0% | |
| ! | AGAGACAGCAGCTGTGTTTT+GGG | + | chr3_3:73071636-73071655 | None:intergenic | 45.0% |
| ! | AAGAGACAGCAGCTGTGTTT+TGG | + | chr3_3:73071637-73071656 | None:intergenic | 45.0% |
| ! | GATGCATGGCAAGAAGCTTT+TGG | - | chr3_3:73072304-73072323 | Msa0470870:intron | 45.0% |
| TGGTGGAAATTCAACTCCAG+CGG | + | chr3_3:73072796-73072815 | None:intergenic | 45.0% | |
| ! | GTTTGAGGAGGTGTGAAGAA+TGG | + | chr3_3:73072837-73072856 | None:intergenic | 45.0% |
| ACAATCGGTTGAGTTTGAGG+AGG | + | chr3_3:73072849-73072868 | None:intergenic | 45.0% | |
| CATGTAGGTTGTAACCGCTA+TGG | + | chr3_3:73073266-73073285 | None:intergenic | 45.0% | |
| TCCTTAGGCATGTGATGTGA+TGG | - | chr3_3:73073648-73073667 | Msa0470870:CDS | 45.0% | |
| ACCATCACATCACATGCCTA+AGG | + | chr3_3:73073652-73073671 | None:intergenic | 45.0% | |
| TTAGGCATGTGATGTGATGG+TGG | - | chr3_3:73073651-73073670 | Msa0470870:CDS | 45.0% | |
| !! | AAGGGTGTTTAGGTTCCACA+TGG | - | chr3_3:73073719-73073738 | Msa0470870:intron | 45.0% |
| ! | AGGGTGTTTAGGTTCCACAT+GGG | - | chr3_3:73073720-73073739 | Msa0470870:intron | 45.0% |
| ACCCTTAAGATTACCCCATG+TGG | + | chr3_3:73073737-73073756 | None:intergenic | 45.0% | |
| AATGCACCATGCCCATATGA+GGG | + | chr3_3:73073764-73073783 | None:intergenic | 45.0% | |
| AAATGCACCATGCCCATATG+AGG | + | chr3_3:73073765-73073784 | None:intergenic | 45.0% | |
| AGACAACATTAGCTAGCGCA+AGG | + | chr3_3:73073853-73073872 | None:intergenic | 45.0% | |
| GCATTATGGAATTCTGGACC+TGG | - | chr3_3:73074234-73074253 | Msa0470870:intron | 45.0% | |
| ! | TAAGCTGGTTGGTGTGAGAT+TGG | - | chr3_3:73074285-73074304 | Msa0470870:intron | 45.0% |
| AATATGTTTGGACAGAGGGG+AGG | - | chr3_3:73074451-73074470 | Msa0470870:intron | 45.0% | |
| !! | GATTTTAGAGAGGACGGCTT+CGG | + | chr3_3:73074624-73074643 | None:intergenic | 45.0% |
| CCTAACCCCTTCACTTACTA+AGG | + | chr3_3:73074663-73074682 | None:intergenic | 45.0% | |
| CCTTAGTAAGTGAAGGGGTT+AGG | - | chr3_3:73074660-73074679 | Msa0470870:intron | 45.0% | |
| TAGTAAGTGAAGGGGTTAGG+AGG | - | chr3_3:73074663-73074682 | Msa0470870:intron | 45.0% | |
| GTGCGTGACTCAGAATTGTT+AGG | - | chr3_3:73074728-73074747 | Msa0470870:intron | 45.0% | |
| GTCTTTCCCTTAATGCCTGT+TGG | - | chr3_3:73074823-73074842 | Msa0470870:intron | 45.0% | |
| TAGGAGCCAACAGGCATTAA+GGG | + | chr3_3:73074832-73074851 | None:intergenic | 45.0% | |
| CAAAATATGTCAGGGCGTGA+AGG | - | chr3_3:73075036-73075055 | Msa0470870:intron | 45.0% | |
| ! | CAAGAAGCATGACACGTTTC+TGG | + | chr3_3:73075102-73075121 | None:intergenic | 45.0% |
| !! | GATGAGGAGCTTTTAGGTCT+GGG | - | chr3_3:73075214-73075233 | Msa0470870:intron | 45.0% |
| GCGAAAGGAACTGCTAATTC+AGG | - | chr3_3:73075289-73075308 | Msa0470870:intron | 45.0% | |
| ACATGTACAAGTGGCAGAAC+TGG | + | chr3_3:73075334-73075353 | None:intergenic | 45.0% | |
| TAGACTGGCATCTTTGATGC+TGG | + | chr3_3:73075613-73075632 | None:intergenic | 45.0% | |
| TCAAAGATGCCAGTCTACTC+TGG | - | chr3_3:73075616-73075635 | Msa0470870:intron | 45.0% | |
| AGTCTACTCTGGTACTAGCA+CGG | - | chr3_3:73075627-73075646 | Msa0470870:intron | 45.0% | |
| AGCACGGTTGACTATCTTAG+TGG | - | chr3_3:73075643-73075662 | Msa0470870:intron | 45.0% | |
| CGAGGAGCTACAAATGAAGT+TGG | + | chr3_3:73075709-73075728 | None:intergenic | 45.0% | |
| ! | TCTGAAGTCTTCATGGGAGA+TGG | + | chr3_3:73075844-73075863 | None:intergenic | 45.0% |
| !! | CAGTGGTTCTGAAGTCTTCA+TGG | + | chr3_3:73075851-73075870 | None:intergenic | 45.0% |
| ! | TTATACTTTGAAGGTGGGGG+TGG | + | chr3_3:73075913-73075932 | None:intergenic | 45.0% |
| TTTCTGTTCTTTGGTTGGGG+TGG | + | chr3_3:73076046-73076065 | None:intergenic | 45.0% | |
| TACTATACCACCATGTGCCC+AGG | - | chr3_3:73070912-73070931 | Msa0470870:CDS | 50.0% | |
| TGGACATGTGCGGAGAAGAT+AGG | - | chr3_3:73071030-73071049 | Msa0470870:intron | 50.0% | |
| CATGTGCGGAGAAGATAGGT+CGG | - | chr3_3:73071034-73071053 | Msa0470870:intron | 50.0% | |
| GATAGGTCGGAGTGCGATTA+AGG | - | chr3_3:73071047-73071066 | Msa0470870:intron | 50.0% | |
| TCAGCCGGACTTAAGTGTGA+GGG | - | chr3_3:73072261-73072280 | Msa0470870:intron | 50.0% | |
| ! | GCATGGCAAGAAGCTTTTGG+AGG | - | chr3_3:73072307-73072326 | Msa0470870:intron | 50.0% |
| ATTGGGGGAAAACTCCGCTT+GGG | + | chr3_3:73072333-73072352 | None:intergenic | 50.0% | |
| TATTGGGGGAAAACTCCGCT+TGG | + | chr3_3:73072334-73072353 | None:intergenic | 50.0% | |
| ATGATGACCACAGGCTAAGC+TGG | + | chr3_3:73072584-73072603 | None:intergenic | 50.0% | |
| AGTCAGATGCATCCGACCTT+AGG | - | chr3_3:73072916-73072935 | Msa0470870:intron | 50.0% | |
| ! | GGGTGTTTAGGTTCCACATG+GGG | - | chr3_3:73073721-73073740 | Msa0470870:intron | 50.0% |
| GTTCATCCCTCATATGGGCA+TGG | - | chr3_3:73073755-73073774 | Msa0470870:intron | 50.0% | |
| CACCTTAAGGCTGCATTTCG+CGG | - | chr3_3:73073814-73073833 | Msa0470870:intron | 50.0% | |
| ACCTTAAGGCTGCATTTCGC+GGG | - | chr3_3:73073815-73073834 | Msa0470870:intron | 50.0% | |
| TTTGAATCCGAAAGACCCCG+AGG | - | chr3_3:73074064-73074083 | Msa0470870:intron | 50.0% | |
| GATATCACCTCGGGGTCTTT+CGG | + | chr3_3:73074074-73074093 | None:intergenic | 50.0% | |
| GTAGGAGCCAACAGGCATTA+AGG | + | chr3_3:73074833-73074852 | None:intergenic | 50.0% | |
| CTTCATGTGTAGGAGCCAAC+AGG | + | chr3_3:73074841-73074860 | None:intergenic | 50.0% | |
| !! | CTGTTGGCTCCTACACATGA+AGG | - | chr3_3:73074839-73074858 | Msa0470870:CDS | 50.0% |
| AATATGTCAGGGCGTGAAGG+AGG | - | chr3_3:73075039-73075058 | Msa0470870:intron | 50.0% | |
| !! | GTTTCTGGTAAGAACGGCAC+TGG | + | chr3_3:73075087-73075106 | None:intergenic | 50.0% |
| !! | GGATGAGGAGCTTTTAGGTC+TGG | - | chr3_3:73075213-73075232 | Msa0470870:intron | 50.0% |
| !! | GGAGCTTTTAGGTCTGGGAT+TGG | - | chr3_3:73075219-73075238 | Msa0470870:intron | 50.0% |
| !! | GTTGAAGGAGTACTCGCTGA+AGG | + | chr3_3:73075258-73075277 | None:intergenic | 50.0% |
| TTCGGAAACCAGAGTCAGTG+AGG | - | chr3_3:73075563-73075582 | Msa0470870:intron | 50.0% | |
| !! | GAGTTCATCCTCACTGACTC+TGG | + | chr3_3:73075574-73075593 | None:intergenic | 50.0% |
| !! | ATCTTTGATGCTGGTGGTGG+GGG | + | chr3_3:73075604-73075623 | None:intergenic | 50.0% |
| ! | CATCTTTGATGCTGGTGGTG+GGG | + | chr3_3:73075605-73075624 | None:intergenic | 50.0% |
| GCATCTTTGATGCTGGTGGT+GGG | + | chr3_3:73075606-73075625 | None:intergenic | 50.0% | |
| ACTGGCATCTTTGATGCTGG+TGG | + | chr3_3:73075610-73075629 | None:intergenic | 50.0% | |
| GTGCTAGTACCAGAGTAGAC+TGG | + | chr3_3:73075628-73075647 | None:intergenic | 50.0% | |
| GGTGATGCATACAAGGCAGA+AGG | - | chr3_3:73075664-73075683 | Msa0470870:intron | 50.0% | |
| GGATTAGGGCTAGAATGACG+AGG | + | chr3_3:73075727-73075746 | None:intergenic | 50.0% | |
| ! | TAGCGGATGAGGTGGGATTA+GGG | + | chr3_3:73075741-73075760 | None:intergenic | 50.0% |
| !! | ATAGCGGATGAGGTGGGATT+AGG | + | chr3_3:73075742-73075761 | None:intergenic | 50.0% |
| !! | CTAGGAATAGCGGATGAGGT+GGG | + | chr3_3:73075748-73075767 | None:intergenic | 50.0% |
| !! | TCTAGGAATAGCGGATGAGG+TGG | + | chr3_3:73075749-73075768 | None:intergenic | 50.0% |
| !! | CTCTCTAGGAATAGCGGATG+AGG | + | chr3_3:73075752-73075771 | None:intergenic | 50.0% |
| !! | GGATGGGTTGAAGACTCTCT+AGG | + | chr3_3:73075766-73075785 | None:intergenic | 50.0% |
| GGTAGTAGTGGCATGAGGAT+GGG | + | chr3_3:73075782-73075801 | None:intergenic | 50.0% | |
| AGGTAGTAGTGGCATGAGGA+TGG | + | chr3_3:73075783-73075802 | None:intergenic | 50.0% | |
| GATGAGGTAGTAGTGGCATG+AGG | + | chr3_3:73075787-73075806 | None:intergenic | 50.0% | |
| ACAGGAGCTTGTGTATCCCA+GGG | + | chr3_3:73075883-73075902 | None:intergenic | 50.0% | |
| TTCGTCTACTGACAGCTTGC+TGG | - | chr3_3:73075990-73076009 | Msa0470870:intron | 50.0% | |
| ! | TCGTCTACTGACAGCTTGCT+GGG | - | chr3_3:73075991-73076010 | Msa0470870:intron | 50.0% |
| !! | AGCTTGAGGCGTCCATTTTG+TGG | - | chr3_3:73076216-73076235 | Msa0470870:five_prime_UTR | 50.0% |
| ACCATGTGCCCAGGTCCTAT+GGG | - | chr3_3:73070921-73070940 | Msa0470870:CDS | 55.0% | |
| TGAAAAGGGGGTCGATGGGA+CGG | - | chr3_3:73070959-73070978 | Msa0470870:intron | 55.0% | |
| AGGTCGGAGTGCGATTAAGG+AGG | - | chr3_3:73071050-73071069 | Msa0470870:intron | 55.0% | |
| GGTCGGAGTGCGATTAAGGA+GGG | - | chr3_3:73071051-73071070 | Msa0470870:intron | 55.0% | |
| GGAGTGCGATTAAGGAGGGT+AGG | - | chr3_3:73071055-73071074 | Msa0470870:intron | 55.0% | |
| CTCAGCCGGACTTAAGTGTG+AGG | - | chr3_3:73072260-73072279 | Msa0470870:intron | 55.0% | |
| !! | GAAGCTTTTGGAGGCCCAAG+CGG | - | chr3_3:73072316-73072335 | Msa0470870:intron | 55.0% |
| TCCATCACCAGCTTAGCCTG+TGG | - | chr3_3:73072574-73072593 | Msa0470870:intron | 55.0% | |
| ACCACAGGCTAAGCTGGTGA+TGG | + | chr3_3:73072578-73072597 | None:intergenic | 55.0% | |
| CGCGAAATGCAGCCTTAAGG+TGG | + | chr3_3:73073816-73073835 | None:intergenic | 55.0% | |
| ACCCGCGAAATGCAGCCTTA+AGG | + | chr3_3:73073819-73073838 | None:intergenic | 55.0% | |
| ! | GGCTGCATTTCGCGGGTTTT+TGG | - | chr3_3:73073822-73073841 | Msa0470870:intron | 55.0% |
| TTAGAGAGGACGGCTTCGGA+GGG | + | chr3_3:73074620-73074639 | None:intergenic | 55.0% | |
| TTTAGAGAGGACGGCTTCGG+AGG | + | chr3_3:73074621-73074640 | None:intergenic | 55.0% | |
| AGTGAAGGGGTTAGGAGGTG+AGG | - | chr3_3:73074668-73074687 | Msa0470870:intron | 55.0% | |
| GGCATCTTTGATGCTGGTGG+TGG | + | chr3_3:73075607-73075626 | None:intergenic | 55.0% | |
| GACAGGAGCTTGTGTATCCC+AGG | + | chr3_3:73075884-73075903 | None:intergenic | 55.0% | |
| CATAGGACCTGGGCACATGG+TGG | + | chr3_3:73070922-73070941 | None:intergenic | 60.0% | |
| CACCATGTGCCCAGGTCCTA+TGG | - | chr3_3:73070920-73070939 | Msa0470870:CDS | 60.0% | |
| ACCCATAGGACCTGGGCACA+TGG | + | chr3_3:73070925-73070944 | None:intergenic | 60.0% | |
| GAAAAGGGGGTCGATGGGAC+GGG | - | chr3_3:73070960-73070979 | Msa0470870:intron | 60.0% | |
| TGTGTATCCCAGGGAGCTGG+AGG | + | chr3_3:73075874-73075893 | None:intergenic | 60.0% | |
| GCTTGTGTATCCCAGGGAGC+TGG | + | chr3_3:73075877-73075896 | None:intergenic | 60.0% | |
| AACCACTGCCTCCAGCTCCC+TGG | - | chr3_3:73075863-73075882 | Msa0470870:CDS | 65.0% | |
| ACCACTGCCTCCAGCTCCCT+GGG | - | chr3_3:73075864-73075883 | Msa0470870:CDS | 65.0% | |
| GGTGGGGGTGGAATCACGAC+AGG | + | chr3_3:73075901-73075920 | None:intergenic | 65.0% | |
| TCCCAGGGAGCTGGAGGCAG+TGG | + | chr3_3:73075868-73075887 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 73070047 | 73076436 | 73070047 | ID=Msa0470870;Name=Msa0470870 |
| chr3_3 | mRNA | 73070047 | 73076436 | 73070047 | ID=Msa0470870-mRNA-1;Parent=Msa0470870;Name=Msa0470870-mRNA-1;_AED=0.21;_eAED=0.21;_QI=254|1|1|1|0.88|0.8|10|284|507 |
| chr3_3 | exon | 73070047 | 73070946 | 73070047 | ID=Msa0470870-mRNA-1:exon:18453;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73071079 | 73071270 | 73071079 | ID=Msa0470870-mRNA-1:exon:18452;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73071349 | 73071434 | 73071349 | ID=Msa0470870-mRNA-1:exon:18451;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73072398 | 73072479 | 73072398 | ID=Msa0470870-mRNA-1:exon:18450;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73073546 | 73073691 | 73073546 | ID=Msa0470870-mRNA-1:exon:18449;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73074105 | 73074218 | 73074105 | ID=Msa0470870-mRNA-1:exon:18448;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73074336 | 73074434 | 73074336 | ID=Msa0470870-mRNA-1:exon:18447;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73074824 | 73074902 | 73074824 | ID=Msa0470870-mRNA-1:exon:18446;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73075814 | 73075956 | 73075814 | ID=Msa0470870-mRNA-1:exon:18445;Parent=Msa0470870-mRNA-1 |
| chr3_3 | exon | 73076216 | 73076436 | 73076216 | ID=Msa0470870-mRNA-1:exon:18444;Parent=Msa0470870-mRNA-1 |
| chr3_3 | five_prime_UTR | 73076216 | 73076436 | 73076216 | ID=Msa0470870-mRNA-1:five_prime_utr;Parent=Msa0470870-mRNA-1 |
| chr3_3 | five_prime_UTR | 73075924 | 73075956 | 73075924 | ID=Msa0470870-mRNA-1:five_prime_utr;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73075814 | 73075923 | 73075814 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73074824 | 73074902 | 73074824 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73074336 | 73074434 | 73074336 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73074105 | 73074218 | 73074105 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73073546 | 73073691 | 73073546 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73072398 | 73072479 | 73072398 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73071349 | 73071434 | 73071349 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73071079 | 73071270 | 73071079 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | CDS | 73070331 | 73070946 | 73070331 | ID=Msa0470870-mRNA-1:cds;Parent=Msa0470870-mRNA-1 |
| chr3_3 | three_prime_UTR | 73070047 | 73070330 | 73070047 | ID=Msa0470870-mRNA-1:three_prime_utr;Parent=Msa0470870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
