AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1262310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262310 MtrunA17_Chr4g0063651 97.744 133 3 0 1 133 1 133 4.69e-92 262
Msa1262310 MtrunA17_Chr3g0137861 55.446 101 35 2 33 133 50 140 2.45e-33 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1262310 AT3G47650.1 67.816 87 27 1 47 133 51 136 3.30e-39 129

Find 37 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGGAAACTTTCAGTCTT+TGG 0.264657 8_2:+64956783 Msa1262310:CDS
TATTTGTTTCAGGGGTAAAA+AGG 0.295472 8_2:+64958761 Msa1262310:intron
TTCAGACAAACTTCCTTCAT+TGG 0.329261 8_2:-64956754 None:intergenic
CTTTCAGTCTTTGGTAGTTA+AGG 0.334458 8_2:+64956792 Msa1262310:CDS
TGTACACAATGCCAAGGTTC+TGG 0.337124 8_2:+64958549 Msa1262310:CDS
GAAGATTTCAAGGAACAAAT+AGG 0.342243 8_2:-64956587 None:intergenic
CACTTCAGACCAAGCTATAA+TGG 0.354403 8_2:+64956544 Msa1262310:exon
AGGAGCTGTTATTGGTAATT+CGG 0.357554 8_2:+64956714 Msa1262310:intron
CCTTCATTGGAAAAGCCTTT+CGG 0.366502 8_2:-64956741 None:intergenic
TTTGATGATTAGAAGAAGAT+TGG 0.375947 8_2:+64958840 Msa1262310:exon
GTGAAGGAGTGAAGTGTTAT+CGG 0.387571 8_2:-64956514 None:intergenic
ACTAACAACATAGGAACAAC+TGG 0.406823 8_2:-64958922 None:intergenic
AATACAATACATAAATGAAT+AGG 0.428057 8_2:-64958959 None:intergenic
AGGTGTGTTTGAAGATTTCA+AGG 0.444748 8_2:-64956597 None:intergenic
GTGGACTATGCTGGCTATGC+AGG 0.447749 8_2:+64958613 Msa1262310:CDS
AATTTGATAGATCACTTCAA+TGG 0.456646 8_2:+64958576 Msa1262310:CDS
TGTGCTGATTGTACTGGAAA+TGG 0.465789 8_2:+64957704 Msa1262310:CDS
ATAGTCCACCAGCTTTAAAT+CGG 0.467197 8_2:-64958599 None:intergenic
TAGCTGTGAACAAAGAGAAA+AGG 0.480249 8_2:+64958889 Msa1262310:three_prime_UTR
TTAAAGCTGGTGGACTATGC+TGG 0.490910 8_2:+64958604 Msa1262310:CDS
TGTGGAAGCTGTAATGGGGC+TGG 0.508502 8_2:+64958792 Msa1262310:CDS
TTCAATGGCCGATTTAAAGC+TGG 0.509356 8_2:+64958591 Msa1262310:CDS
ATTGTTTGTGCTGATTGTAC+TGG 0.511973 8_2:+64957698 Msa1262310:CDS
GTTTGTCTGAATTCTAAAGA+TGG 0.512722 8_2:+64956766 Msa1262310:CDS
TGGTAATTCGGTTGTCCGAA+AGG 0.519727 8_2:+64956726 Msa1262310:CDS
AAGATTGCGCCATTATAGCT+TGG 0.538410 8_2:-64956553 None:intergenic
TCAAATTAACTCCAGAACCT+TGG 0.541033 8_2:-64958560 None:intergenic
CTGAGTTTATAATTGTTCCA+TGG 0.553107 8_2:+64964679 Msa1262310:three_prime_UTR
AATGGCCGATTTAAAGCTGG+TGG 0.561238 8_2:+64958594 Msa1262310:CDS
TGAACAAAGAGAAAAGGAAG+TGG 0.568929 8_2:+64958895 Msa1262310:three_prime_UTR
ATTTATGTATTGTATTGTTG+TGG 0.585993 8_2:+64958966 Msa1262310:three_prime_UTR
AGTAGAATTACACTCATCCA+TGG 0.595035 8_2:-64964696 None:intergenic
GCTACAGAAGATAGTAGCAA+AGG 0.599716 8_2:+64957656 Msa1262310:CDS
TTGAAATCTTCAAACACACC+TGG 0.600375 8_2:+64956599 Msa1262310:CDS
ATAGAATGTACACAATGCCA+AGG 0.643179 8_2:+64958543 Msa1262310:CDS
TCTGAAGTGAAGTGAAGTGA+AGG 0.645211 8_2:-64956530 None:intergenic
TTTGTGTGGAAGCTGTAATG+GGG 0.699284 8_2:+64958788 Msa1262310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTATTTTATTTGTAAATT+GGG - chr8_2:64956836-64956855 None:intergenic 10.0%
!!! AAAGTATTTTATTTGTAAAT+TGG - chr8_2:64956837-64956856 None:intergenic 10.0%
!!! TCTGATTTATTTATATTTTT+TGG - chr8_2:64961507-64961526 None:intergenic 10.0%
!! GTATTATTGTATTTATATAT+AGG - chr8_2:64961748-64961767 None:intergenic 10.0%
!!! AACTTTGATTTTTTTTTTTA+TGG + chr8_2:64962447-64962466 Msa1262310:intron 10.0%
!! ATAAATAATATCAAAATAGT+TGG + chr8_2:64962732-64962751 Msa1262310:intron 10.0%
!!! TATATAAGTATAATTTTTCT+AGG + chr8_2:64963012-64963031 Msa1262310:intron 10.0%
!! AGAAAGAAAATAAAAATATT+TGG + chr8_2:64963224-64963243 Msa1262310:intron 10.0%
!! AAAAAGGTAATAAAATTAAA+TGG + chr8_2:64963353-64963372 Msa1262310:intron 10.0%
!! AAAAGGTAATAAAATTAAAT+GGG + chr8_2:64963354-64963373 Msa1262310:intron 10.0%
!! ATATTAGAAAATAAAAGAAA+AGG + chr8_2:64964148-64964167 Msa1262310:intron 10.0%
!! ATAGTTAAAAACATAAAAAT+TGG + chr8_2:64964448-64964467 Msa1262310:intron 10.0%
!!! TCATTTTCTCAAATTATTAT+TGG + chr8_2:64956978-64956997 Msa1262310:intron 15.0%
!! TTATAAAAATATCTGCAAAA+AGG - chr8_2:64957149-64957168 None:intergenic 15.0%
!! TTATTGAAGAAAAATTAAAC+TGG - chr8_2:64957298-64957317 None:intergenic 15.0%
!! AAGGAATAATTTCTAAATTT+AGG + chr8_2:64957417-64957436 Msa1262310:intron 15.0%
!! AATAGTAAAAACTAATTACA+GGG - chr8_2:64957483-64957502 None:intergenic 15.0%
!!! GATTTTTTAAGCATATTTTA+GGG + chr8_2:64958046-64958065 Msa1262310:intron 15.0%
!! AATACAATACATAAATGAAT+AGG - chr8_2:64958962-64958981 None:intergenic 15.0%
!! ATTCATCATAAAATATGTAT+GGG + chr8_2:64959085-64959104 Msa1262310:intron 15.0%
!!! AACACTCTTTTTTATAATTT+TGG - chr8_2:64959228-64959247 None:intergenic 15.0%
!! ATAATTAACATGATACTAAT+TGG + chr8_2:64959790-64959809 Msa1262310:intron 15.0%
!!! ATATTTTTTTAAGAAATCAG+CGG - chr8_2:64961197-64961216 None:intergenic 15.0%
!! ATCTATAAGAACATTATAAT+CGG + chr8_2:64961220-64961239 Msa1262310:intron 15.0%
!!! GTTTTATATGATATAGTTAT+GGG - chr8_2:64961270-64961289 None:intergenic 15.0%
!!! ATATTTTTTGGTTTCTTTAT+TGG - chr8_2:64961495-64961514 None:intergenic 15.0%
!!! GTTGTAACAATTTTTATATT+TGG - chr8_2:64961976-64961995 None:intergenic 15.0%
!! TCAAAACAAAGTTAAAATAA+AGG + chr8_2:64962329-64962348 Msa1262310:intron 15.0%
!!! TTTTTAAGTTAAATGTTGTT+TGG + chr8_2:64962410-64962429 Msa1262310:intron 15.0%
!!! ATGTTTAAAATATTTTCTGA+AGG + chr8_2:64962583-64962602 Msa1262310:intron 15.0%
!!! TTATAAGAATACCATATTTT+TGG + chr8_2:64962792-64962811 Msa1262310:intron 15.0%
!!! TATTATATTTGTTACATTGT+TGG + chr8_2:64962850-64962869 Msa1262310:intron 15.0%
!!! AGAAAATTCTTTTGAAAAAA+AGG + chr8_2:64963337-64963356 Msa1262310:intron 15.0%
!!! TTTTAATGCATAAAATTGAA+TGG - chr8_2:64963568-64963587 None:intergenic 15.0%
!! AAATAAGTACTTAGTAAAAA+AGG - chr8_2:64963597-64963616 None:intergenic 15.0%
!! TGGAAAATAGTTAAAAAAAT+CGG + chr8_2:64963775-64963794 Msa1262310:intron 15.0%
!!! TAATTTTTTTTAGTGTTGAT+TGG - chr8_2:64963816-64963835 None:intergenic 15.0%
!! AAATACTTAAAAAAATTGTG+AGG + chr8_2:64964508-64964527 Msa1262310:intron 15.0%
!! AATACTTAAAAAAATTGTGA+GGG + chr8_2:64964509-64964528 Msa1262310:intron 15.0%
!!! GAATTTGTTTCACTTTTAAT+AGG + chr8_2:64956694-64956713 Msa1262310:intron 20.0%
!! TGAAATGAAAAAGAGAAATT+TGG + chr8_2:64957169-64957188 Msa1262310:intron 20.0%
!! TCAAATATGAAAGAATGAAA+TGG - chr8_2:64957218-64957237 None:intergenic 20.0%
!!! ATATTTGAAACAGTGAATTA+TGG + chr8_2:64957230-64957249 Msa1262310:intron 20.0%
!! TTTCTTCAATAATAGAAAGT+AGG + chr8_2:64957306-64957325 Msa1262310:intron 20.0%
!! ATAGTAAAAACTAATTACAG+GGG - chr8_2:64957482-64957501 None:intergenic 20.0%
!! CAATAGTAAAAACTAATTAC+AGG - chr8_2:64957484-64957503 None:intergenic 20.0%
!!! CTTTGATTTTGATTTAATAC+AGG + chr8_2:64957634-64957653 Msa1262310:intron 20.0%
!!! AGATTTCAACTTTCTTTTTA+TGG + chr8_2:64957740-64957759 Msa1262310:intron 20.0%
!!! GGATTTTTTAAGCATATTTT+AGG + chr8_2:64958045-64958064 Msa1262310:intron 20.0%
!! AAAAGTCATAATTAAGAACA+AGG + chr8_2:64958363-64958382 Msa1262310:intron 20.0%
!! ATGTATGTATATTTGTTTCA+GGG + chr8_2:64958752-64958771 Msa1262310:intron 20.0%
!! ATTTATGTATTGTATTGTTG+TGG + chr8_2:64958966-64958985 Msa1262310:three_prime_UTR 20.0%
!! GATTCATCATAAAATATGTA+TGG + chr8_2:64959084-64959103 Msa1262310:intron 20.0%
!! TATAATCAGTTTATGAGATT+AGG + chr8_2:64959123-64959142 Msa1262310:intron 20.0%
!! TAGGAATTGACATAATATTT+AGG + chr8_2:64959142-64959161 Msa1262310:intron 20.0%
!!! ATATTTAGGATGAAAACAAT+TGG + chr8_2:64959156-64959175 Msa1262310:intron 20.0%
!! ATTTCATCTGATGTAAATAT+GGG - chr8_2:64959283-64959302 None:intergenic 20.0%
!! ATTAACGTTACATAATAGTT+AGG + chr8_2:64959841-64959860 Msa1262310:intron 20.0%
!!! ATTTTGTCTGATGTAAATAT+TGG - chr8_2:64959917-64959936 None:intergenic 20.0%
!! TTTGTTTCAACAATGTTAAT+TGG - chr8_2:64960327-64960346 None:intergenic 20.0%
!! ATTAACATTGTTGAAACAAA+TGG + chr8_2:64960327-64960346 Msa1262310:intron 20.0%
!! AAGTTTATAAATTCAGCAAT+TGG + chr8_2:64960604-64960623 Msa1262310:intron 20.0%
!! ACCAATTGTTACATATATTT+GGG + chr8_2:64960900-64960919 Msa1262310:intron 20.0%
!!! TATTTTTTTAAGAAATCAGC+GGG - chr8_2:64961196-64961215 None:intergenic 20.0%
!!! CGTTTTATATGATATAGTTA+TGG - chr8_2:64961271-64961290 None:intergenic 20.0%
!! GTAACATTGATAAATCATAA+AGG + chr8_2:64961541-64961560 Msa1262310:intron 20.0%
!!! ATTTTTTTTTTTATGGTGTC+CGG + chr8_2:64962454-64962473 Msa1262310:intron 20.0%
!!! GACTTGTTAAATATTTGATT+AGG + chr8_2:64962678-64962697 Msa1262310:intron 20.0%
!!! CATAGTTTGTTACAATATAA+AGG + chr8_2:64962922-64962941 Msa1262310:intron 20.0%
!!! TTCCATTTAATTTTTTAAGG+AGG - chr8_2:64963381-64963400 None:intergenic 20.0%
!!! TCGTTCCATTTAATTTTTTA+AGG - chr8_2:64963384-64963403 None:intergenic 20.0%
!!! CTGAATTTGAGATAAAAAAT+TGG + chr8_2:64963719-64963738 Msa1262310:intron 20.0%
!! GGTTCAAAAAAAAAGTTAAA+TGG + chr8_2:64964100-64964119 Msa1262310:intron 20.0%
!! TTTGAATGCATAAAATTGAA+TGG - chr8_2:64964269-64964288 None:intergenic 20.0%
!! ATACTTAAAAAAATTGTGAG+GGG + chr8_2:64964510-64964529 Msa1262310:intron 20.0%
!!! CATTTTTGTAATTTCCAAAT+TGG - chr8_2:64964588-64964607 None:intergenic 20.0%
!!! TTCTACTATATTTTGTTGAT+TGG + chr8_2:64964712-64964731 Msa1262310:three_prime_UTR 20.0%
! ACATAAAAGTTAATAGTACC+AGG - chr8_2:64956620-64956639 None:intergenic 25.0%
!!! GATTTGTTGAATTCTATGAA+AGG + chr8_2:64957040-64957059 Msa1262310:intron 25.0%
! TTTGGATATCTGTTGTATAA+TGG + chr8_2:64957079-64957098 Msa1262310:intron 25.0%
! AATTTCTGTATTCATTGCAT+TGG + chr8_2:64957371-64957390 Msa1262310:intron 25.0%
! TCAAAATCAAAGACTTATTC+AGG - chr8_2:64957626-64957645 None:intergenic 25.0%
! AATGGTGCTCATTAATTTAA+AGG - chr8_2:64957806-64957825 None:intergenic 25.0%
! AGAAAAATCTCCAAACTATT+GGG - chr8_2:64957985-64958004 None:intergenic 25.0%
!! TGCTTTTGTTACCAATTATT+TGG + chr8_2:64958073-64958092 Msa1262310:intron 25.0%
! TGAAGAAAAGTTGAAGAAAA+AGG - chr8_2:64958247-64958266 None:intergenic 25.0%
! GAAAAATGAGTATAAAGTGT+TGG - chr8_2:64958307-64958326 None:intergenic 25.0%
! AATTTGATAGATCACTTCAA+TGG + chr8_2:64958576-64958595 Msa1262310:CDS 25.0%
! ATATACATACATGTTGCAAA+GGG - chr8_2:64958744-64958763 None:intergenic 25.0%
! AATATACATACATGTTGCAA+AGG - chr8_2:64958745-64958764 None:intergenic 25.0%
! CATGTATGTATATTTGTTTC+AGG + chr8_2:64958751-64958770 Msa1262310:intron 25.0%
! TGTATGTATATTTGTTTCAG+GGG + chr8_2:64958753-64958772 Msa1262310:intron 25.0%
!! TTTGATGATTAGAAGAAGAT+TGG + chr8_2:64958840-64958859 Msa1262310:exon 25.0%
! CAAAAAAAGACTAACAACAT+AGG - chr8_2:64958934-64958953 None:intergenic 25.0%
! AAGAGTAGATATTAAAACGA+CGG + chr8_2:64959053-64959072 Msa1262310:intron 25.0%
! AAAACAATTGGAACCAATAA+AGG + chr8_2:64959168-64959187 Msa1262310:intron 25.0%
! AATCATAATTCACACATCAT+TGG - chr8_2:64959196-64959215 None:intergenic 25.0%
! TGTTATAGAGTTACCAAAAA+AGG + chr8_2:64959250-64959269 Msa1262310:intron 25.0%
! GATTTCATCTGATGTAAATA+TGG - chr8_2:64959284-64959303 None:intergenic 25.0%
! ATGAACACCAAATCTTTATT+TGG + chr8_2:64959383-64959402 Msa1262310:intron 25.0%
!! TGAACACCAAATCTTTATTT+GGG + chr8_2:64959384-64959403 Msa1262310:intron 25.0%
! ATATCAAGGACATTTCTAAA+AGG - chr8_2:64959612-64959631 None:intergenic 25.0%
!! TCTATTTTGTTCAAGAGATT+AGG + chr8_2:64959756-64959775 Msa1262310:intron 25.0%
! TAGTCTAATGCATATTTACA+TGG + chr8_2:64960139-64960158 Msa1262310:intron 25.0%
! AAACATACTGCATTACTATT+TGG - chr8_2:64960476-64960495 None:intergenic 25.0%
! TGGTCAAAAAACAATCAAAT+CGG + chr8_2:64960762-64960781 Msa1262310:intron 25.0%
! AATATATGTAACAATTGGTC+AGG - chr8_2:64960899-64960918 None:intergenic 25.0%
! GACCAATTGTTACATATATT+TGG + chr8_2:64960899-64960918 Msa1262310:intron 25.0%
! ACCCAAATATATGTAACAAT+TGG - chr8_2:64960904-64960923 None:intergenic 25.0%
! TATTGTTGATGTAACACTAT+GGG - chr8_2:64961002-64961021 None:intergenic 25.0%
! ATATTGTTGATGTAACACTA+TGG - chr8_2:64961003-64961022 None:intergenic 25.0%
! ACATTGTGTTGAAAGATAAA+AGG - chr8_2:64961115-64961134 None:intergenic 25.0%
! TCATTTAAGGAAATTCAAGA+TGG - chr8_2:64961309-64961328 None:intergenic 25.0%
!! ATTTCGCTTTAAGTCATTTA+AGG - chr8_2:64961322-64961341 None:intergenic 25.0%
!!! TTTAAGGTTGTTTTTAGTTC+TGG - chr8_2:64961393-64961412 None:intergenic 25.0%
! CATTGCATTTAATCTCTTTA+AGG - chr8_2:64961409-64961428 None:intergenic 25.0%
!!! TTTTTGGTTTCTTTATTGGA+AGG - chr8_2:64961491-64961510 None:intergenic 25.0%
!! TCAAAAATGATTTGGACATT+TGG - chr8_2:64961687-64961706 None:intergenic 25.0%
! TAAGGATCTCAAAAATGATT+TGG - chr8_2:64961695-64961714 None:intergenic 25.0%
!! TTTCTGTATCATCAACTTTT+TGG + chr8_2:64961876-64961895 Msa1262310:intron 25.0%
!!! TGATTGGTGTAAATTTGTTT+TGG - chr8_2:64961917-64961936 None:intergenic 25.0%
! GAAAAAAAATTGATGCATGT+GGG - chr8_2:64962028-64962047 None:intergenic 25.0%
! TGAAAAAAAATTGATGCATG+TGG - chr8_2:64962029-64962048 None:intergenic 25.0%
!!! ACAATTGCTATTTTAGTTTC+TGG - chr8_2:64962061-64962080 None:intergenic 25.0%
!!! CTTGAGTTGACTAATTTTTA+TGG - chr8_2:64962182-64962201 None:intergenic 25.0%
!!! TTTTTTTTTTTATGGTGTCC+GGG + chr8_2:64962455-64962474 Msa1262310:intron 25.0%
! TGATTAGGAGAAACAATTTA+AGG + chr8_2:64962693-64962712 Msa1262310:intron 25.0%
! TTTGAAAGACACCAAAAATA+TGG - chr8_2:64962806-64962825 None:intergenic 25.0%
!! AGATGTCTTTTCTTCAAAAA+AGG - chr8_2:64963046-64963065 None:intergenic 25.0%
!!! CTACTGCGTATAATTTTTTT+TGG - chr8_2:64963129-64963148 None:intergenic 25.0%
! CGTGAATAAAAATATTTGTG+AGG + chr8_2:64963263-64963282 Msa1262310:intron 25.0%
! GACCTCCTTAAAAAATTAAA+TGG + chr8_2:64963376-64963395 Msa1262310:intron 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG - chr8_2:64963634-64963653 None:intergenic 25.0%
!! TCAACTTCTCTACATTTTTA+AGG - chr8_2:64963644-64963663 None:intergenic 25.0%
! TAGAGAAGTTGAAAAAAAAC+CGG + chr8_2:64963652-64963671 Msa1262310:intron 25.0%
! AATAGTTAAAAAAATCGGTG+AGG + chr8_2:64963780-64963799 Msa1262310:intron 25.0%
! AGTAACAAAAAAATAGACAG+AGG + chr8_2:64963846-64963865 Msa1262310:intron 25.0%
! GTAACAAAAAAATAGACAGA+GGG + chr8_2:64963847-64963866 Msa1262310:intron 25.0%
! CGTGAATAAAAATATTTGTG+AGG + chr8_2:64963263-64963282 Msa1262310:intron 25.0%
! AACCTCCTTAAAAAATTGAA+TGG + chr8_2:64964074-64964093 Msa1262310:intron 25.0%
!!! TTCCATTCAATTTTTTAAGG+AGG - chr8_2:64964079-64964098 None:intergenic 25.0%
! CCTTAAAAAATTGAATGGAA+CGG + chr8_2:64964079-64964098 Msa1262310:intron 25.0%
!! AAGTAACATTCAACAACTTT+TGG + chr8_2:64964231-64964250 Msa1262310:intron 25.0%
!!! TACATTTTTAAGGAGAAGTT+AGG - chr8_2:64963634-64963653 None:intergenic 25.0%
!! TTTTGTAATTTCCAAATTGG+TGG - chr8_2:64964585-64964604 None:intergenic 25.0%
GAAGATTTCAAGGAACAAAT+AGG - chr8_2:64956590-64956609 None:intergenic 30.0%
! CTTTTAATAGGAGCTGTTAT+TGG + chr8_2:64956706-64956725 Msa1262310:intron 30.0%
! GTTTGTCTGAATTCTAAAGA+TGG + chr8_2:64956766-64956785 Msa1262310:CDS 30.0%
CTGAATATAATCACATGTGT+CGG - chr8_2:64956953-64956972 None:intergenic 30.0%
ATTCTATGAAAGGATATGTC+AGG + chr8_2:64957050-64957069 Msa1262310:intron 30.0%
TTCTATGAAAGGATATGTCA+GGG + chr8_2:64957051-64957070 Msa1262310:intron 30.0%
GAAAGAATGAAATGGAATCA+AGG - chr8_2:64957210-64957229 None:intergenic 30.0%
GCATTGGAAATTGTAATAGT+TGG + chr8_2:64957387-64957406 Msa1262310:intron 30.0%
!!! TGTAATAGTTGGCTTTTTGA+AGG + chr8_2:64957398-64957417 Msa1262310:intron 30.0%
! TAGTTTTTACTATTGTGTCG+TGG + chr8_2:64957489-64957508 Msa1262310:intron 30.0%
!! GAAGAGAAGTGTTGAAATAA+CGG + chr8_2:64957521-64957540 Msa1262310:intron 30.0%
ATGAAACAGACTGCTATAAA+TGG - chr8_2:64957824-64957843 None:intergenic 30.0%
ATGTTCGACTGTATTGTTTA+AGG - chr8_2:64957886-64957905 None:intergenic 30.0%
GAGAAAAATCTCCAAACTAT+TGG - chr8_2:64957986-64958005 None:intergenic 30.0%
!! ATTGTTGTTGATGATTCTCT+AGG + chr8_2:64958024-64958043 Msa1262310:intron 30.0%
! TGTTACCAATTATTTGGAGT+TGG + chr8_2:64958079-64958098 Msa1262310:intron 30.0%
! GTTACCAATTATTTGGAGTT+GGG + chr8_2:64958080-64958099 Msa1262310:intron 30.0%
! TTACCAATTATTTGGAGTTG+GGG + chr8_2:64958081-64958100 Msa1262310:intron 30.0%
! CTTCAACTTTTCTTCATGTT+TGG + chr8_2:64958251-64958270 Msa1262310:intron 30.0%
!! AAATGAGTATAAAGTGTTGG+AGG - chr8_2:64958304-64958323 None:intergenic 30.0%
AATCTTTCATGGAAAAGGTT+TGG - chr8_2:64958420-64958439 None:intergenic 30.0%
! ACCTTTTCCATGAAAGATTT+AGG + chr8_2:64958421-64958440 Msa1262310:intron 30.0%
CTACCTACATATTATGAATC+AGG + chr8_2:64958449-64958468 Msa1262310:intron 30.0%
GATCCTGATTCATAATATGT+AGG - chr8_2:64958455-64958474 None:intergenic 30.0%
! ATAACTTTTTGCTCAATTCC+AGG + chr8_2:64958516-64958535 Msa1262310:intron 30.0%
ATGCTCATACAAGATAACAA+AGG - chr8_2:64958661-64958680 None:intergenic 30.0%
GCAAAGGGATGATTATAATA+TGG - chr8_2:64958729-64958748 None:intergenic 30.0%
TATTTGTTTCAGGGGTAAAA+AGG + chr8_2:64958761-64958780 Msa1262310:intron 30.0%
! GGTAAAAAGGATATTTTGTG+TGG + chr8_2:64958774-64958793 Msa1262310:CDS 30.0%
ATCATAAAATATGTATGGGC+TGG + chr8_2:64959089-64959108 Msa1262310:intron 30.0%
!!! TATGGGTATCAATCCTTTTT+TGG - chr8_2:64959266-64959285 None:intergenic 30.0%
! ACTTGAACGTGCATATTTTT+AGG + chr8_2:64959411-64959430 Msa1262310:intron 30.0%
AGTTACGAAAAATACTTAGG+CGG - chr8_2:64959510-64959529 None:intergenic 30.0%
GCAAGTTACGAAAAATACTT+AGG - chr8_2:64959513-64959532 None:intergenic 30.0%
AATGTCCTTGATATCTCATT+TGG + chr8_2:64959618-64959637 Msa1262310:intron 30.0%
ATGTCCTTGATATCTCATTT+GGG + chr8_2:64959619-64959638 Msa1262310:intron 30.0%
ATACTAATTGGAACCAATGA+AGG + chr8_2:64959802-64959821 Msa1262310:intron 30.0%
GTGTCAAAGACAAACTAAAA+AGG + chr8_2:64959883-64959902 Msa1262310:intron 30.0%
!!! ATTTTCATAGCTTGCTCTAT+CGG + chr8_2:64959985-64960004 Msa1262310:intron 30.0%
TGTATTTATCTAGACCTTAC+AGG - chr8_2:64960276-64960295 None:intergenic 30.0%
TCTCATAATACAATCCAAAC+TGG + chr8_2:64960427-64960446 Msa1262310:intron 30.0%
TAATACAATCCAAACTGGTT+AGG + chr8_2:64960432-64960451 Msa1262310:intron 30.0%
AAATTCAATCCTAACCAGTT+TGG - chr8_2:64960444-64960463 None:intergenic 30.0%
AAGCATGTTTGTGCATAAAA+AGG + chr8_2:64960569-64960588 Msa1262310:intron 30.0%
AAATGTAAGCAAAGAACTCA+AGG + chr8_2:64960938-64960957 Msa1262310:intron 30.0%
AAGAACTCAAGGTAAATAGA+TGG + chr8_2:64960949-64960968 Msa1262310:intron 30.0%
GATGGTAAATGATAAAGCTA+TGG + chr8_2:64960967-64960986 Msa1262310:intron 30.0%
TTGTTAAGACAACACCAATT+GGG - chr8_2:64961160-64961179 None:intergenic 30.0%
ATTGTTAAGACAACACCAAT+TGG - chr8_2:64961161-64961180 None:intergenic 30.0%
!!! TGTTTTTAGTTCTGGTACAA+AGG - chr8_2:64961385-64961404 None:intergenic 30.0%
GACATTTGGAAAATAGGATT+TGG - chr8_2:64961673-64961692 None:intergenic 30.0%
GATTTGGACATTTGGAAAAT+AGG - chr8_2:64961679-64961698 None:intergenic 30.0%
AAGGGATTATGACTACATTA+AGG - chr8_2:64961713-64961732 None:intergenic 30.0%
TATAGGACTTTCAATGTCAA+GGG - chr8_2:64961731-64961750 None:intergenic 30.0%
ATATAGGACTTTCAATGTCA+AGG - chr8_2:64961732-64961751 None:intergenic 30.0%
TCGATATCAGAATGAACAAA+GGG - chr8_2:64961787-64961806 None:intergenic 30.0%
TTCGATATCAGAATGAACAA+AGG - chr8_2:64961788-64961807 None:intergenic 30.0%
!!! TTGTTTTGGTCATATCATTG+TGG - chr8_2:64961903-64961922 None:intergenic 30.0%
!!! TTGAATTTTAGCTCATGGTA+AGG - chr8_2:64962091-64962110 None:intergenic 30.0%
!!! GATGATTGAATTTTAGCTCA+TGG - chr8_2:64962096-64962115 None:intergenic 30.0%
!!! CTGTTTTAGTTTTTGCTATG+TGG - chr8_2:64962136-64962155 None:intergenic 30.0%
! ACTAATTTTTATGGCTTGAG+GGG - chr8_2:64962173-64962192 None:intergenic 30.0%
! GACTAATTTTTATGGCTTGA+GGG - chr8_2:64962174-64962193 None:intergenic 30.0%
! TGACTAATTTTTATGGCTTG+AGG - chr8_2:64962175-64962194 None:intergenic 30.0%
TTCACTTTCTTCTTCATTAG+AGG - chr8_2:64962246-64962265 None:intergenic 30.0%
! TTTTAGACCGTAAAAAACCT+TGG - chr8_2:64962303-64962322 None:intergenic 30.0%
! AACTTTAGCTTCGTTCTTAA+AGG - chr8_2:64962355-64962374 None:intergenic 30.0%
!!! TTTTTTTTTTATGGTGTCCG+GGG + chr8_2:64962456-64962475 Msa1262310:intron 30.0%
! AAGTGACATTCAACAACTTT+TGG + chr8_2:64963530-64963549 Msa1262310:intron 30.0%
AGAGAAGTTGAAAAAAAACC+GGG + chr8_2:64963653-64963672 Msa1262310:intron 30.0%
!!! CCGTTCCATTCAATTTTTTA+AGG - chr8_2:64964082-64964101 None:intergenic 30.0%
AAATTGAATGGAATGAGCTT+TGG - chr8_2:64963556-64963575 None:intergenic 30.0%
! CCAACTTCTCTACATTTTTA+AGG - chr8_2:64964346-64964365 None:intergenic 30.0%
CCTTAAAAATGTAGAGAAGT+TGG + chr8_2:64963641-64963660 Msa1262310:intron 30.0%
AGAGAAGTTGGAAAAAAAAC+CGG + chr8_2:64964355-64964374 Msa1262310:intron 30.0%
AATGTAGAAGCAACTGAATT+TGG + chr8_2:64964409-64964428 Msa1262310:intron 30.0%
ATGTAGAAGCAACTGAATTT+GGG + chr8_2:64964410-64964429 Msa1262310:intron 30.0%
GGTAAATTTCACCCATAAAA+AGG + chr8_2:64964539-64964558 Msa1262310:intron 30.0%
AAAACCAATTTCCACCAATT+TGG + chr8_2:64964571-64964590 Msa1262310:intron 30.0%
ATTTCCAAATTGGTGGAAAT+TGG - chr8_2:64964578-64964597 None:intergenic 30.0%
GGCAAAATGAGAAATTCATA+GGG + chr8_2:64964619-64964638 Msa1262310:intron 30.0%
CTGAGTTTATAATTGTTCCA+TGG + chr8_2:64964679-64964698 Msa1262310:three_prime_UTR 30.0%
AGGTGTGTTTGAAGATTTCA+AGG - chr8_2:64956600-64956619 None:intergenic 35.0%
TTGAAATCTTCAAACACACC+TGG + chr8_2:64956599-64956618 Msa1262310:CDS 35.0%
! AGGAGCTGTTATTGGTAATT+CGG + chr8_2:64956714-64956733 Msa1262310:intron 35.0%
TTCAGACAAACTTCCTTCAT+TGG - chr8_2:64956757-64956776 None:intergenic 35.0%
AGATGGAAACTTTCAGTCTT+TGG + chr8_2:64956783-64956802 Msa1262310:CDS 35.0%
! CTTTCAGTCTTTGGTAGTTA+AGG + chr8_2:64956792-64956811 Msa1262310:CDS 35.0%
! AACAAATCTATGAAGCACTC+CGG - chr8_2:64957028-64957047 None:intergenic 35.0%
AGAATGAAATGGAATCAAGG+AGG - chr8_2:64957207-64957226 None:intergenic 35.0%
CAAAGGCTATGGAATATACT+AGG - chr8_2:64957258-64957277 None:intergenic 35.0%
CTAGTATATTCCATAGCCTT+TGG + chr8_2:64957256-64957275 Msa1262310:intron 35.0%
TATTGTGTCGTGGTTAACAA+TGG + chr8_2:64957499-64957518 Msa1262310:intron 35.0%
GTTGAAATAACGGTTAGAGT+TGG + chr8_2:64957531-64957550 Msa1262310:intron 35.0%
GTGTACAACAGATCTGTAAT+AGG + chr8_2:64957562-64957581 Msa1262310:intron 35.0%
CTATGACAAGTATCAGGAAA+AGG - chr8_2:64957593-64957612 None:intergenic 35.0%
!! ATTGTTTGTGCTGATTGTAC+TGG + chr8_2:64957698-64957717 Msa1262310:CDS 35.0%
CAAACTATTGGGTTATCTCA+CGG - chr8_2:64957974-64957993 None:intergenic 35.0%
! GAGCTGATGTTTATAATGGA+AGG - chr8_2:64958152-64958171 None:intergenic 35.0%
TGGTGAGCTGATGTTTATAA+TGG - chr8_2:64958156-64958175 None:intergenic 35.0%
! CTTGATGCATTGACATCTAT+TGG - chr8_2:64958176-64958195 None:intergenic 35.0%
TAAGTACGAGGAAAAAGAGA+AGG - chr8_2:64958223-64958242 None:intergenic 35.0%
GAAGAAAAAGGATAAGTACG+AGG - chr8_2:64958235-64958254 None:intergenic 35.0%
! ACTTTTCTTCATGTTTGGCT+AGG + chr8_2:64958256-64958275 Msa1262310:intron 35.0%
GCCTAAATCTTTCATGGAAA+AGG - chr8_2:64958425-64958444 None:intergenic 35.0%
ATCATAAAGATTGCTTCGAC+TGG + chr8_2:64958489-64958508 Msa1262310:intron 35.0%
TCATAAAGATTGCTTCGACT+GGG + chr8_2:64958490-64958509 Msa1262310:intron 35.0%
ATAGAATGTACACAATGCCA+AGG + chr8_2:64958543-64958562 Msa1262310:CDS 35.0%
TCAAATTAACTCCAGAACCT+TGG - chr8_2:64958563-64958582 None:intergenic 35.0%
!! ATAGTCCACCAGCTTTAAAT+CGG - chr8_2:64958602-64958621 None:intergenic 35.0%
GTGTAACTGTGTTATGTTCT+TGG + chr8_2:64958681-64958700 Msa1262310:intron 35.0%
! ATTTTGTGTGGAAGCTGTAA+TGG + chr8_2:64958786-64958805 Msa1262310:CDS 35.0%
! TTTTGTGTGGAAGCTGTAAT+GGG + chr8_2:64958787-64958806 Msa1262310:CDS 35.0%
TAGCTGTGAACAAAGAGAAA+AGG + chr8_2:64958889-64958908 Msa1262310:three_prime_UTR 35.0%
TGAACAAAGAGAAAAGGAAG+TGG + chr8_2:64958895-64958914 Msa1262310:three_prime_UTR 35.0%
ACTAACAACATAGGAACAAC+TGG - chr8_2:64958925-64958944 None:intergenic 35.0%
!! CACATCATTGGTTCCTTTAT+TGG - chr8_2:64959184-64959203 None:intergenic 35.0%
ATCAAGCAAAGTAGTAGCAT+CGG + chr8_2:64959301-64959320 Msa1262310:intron 35.0%
GAGTGAAGATAATCTAGTCT+AGG + chr8_2:64959325-64959344 Msa1262310:intron 35.0%
! CTAGTCTAGGATTAGAGTTA+AGG + chr8_2:64959338-64959357 Msa1262310:intron 35.0%
AAGGTGATATGTTGAAAGTG+CGG + chr8_2:64959357-64959376 Msa1262310:intron 35.0%
GTCGTTCCCAAATAAAGATT+TGG - chr8_2:64959393-64959412 None:intergenic 35.0%
!!! TGAACGTGCATATTTTTAGG+TGG + chr8_2:64959414-64959433 Msa1262310:intron 35.0%
CTACCTCTAACATATGTTCT+CGG + chr8_2:64959466-64959485 Msa1262310:intron 35.0%
AAAAATACTTAGGCGGACAA+TGG - chr8_2:64959503-64959522 None:intergenic 35.0%
!! GTATAAGTGTCGCTTGATAA+CGG - chr8_2:64959544-64959563 None:intergenic 35.0%
! GGACATTTCTAAAAGGAACA+CGG - chr8_2:64959605-64959624 None:intergenic 35.0%
ACTTCCCAAATGAGATATCA+AGG - chr8_2:64959626-64959645 None:intergenic 35.0%
AACGTTAATCTGCACATTGT+TGG - chr8_2:64959830-64959849 None:intergenic 35.0%
GCTATGAAAATTACTTGCGT+GGG - chr8_2:64959976-64959995 None:intergenic 35.0%
AGCTATGAAAATTACTTGCG+TGG - chr8_2:64959977-64959996 None:intergenic 35.0%
GTGTCAAGAACAATTCTGAA+AGG - chr8_2:64960079-64960098 None:intergenic 35.0%
TGTTTAACATTTCCCAAACG+AGG - chr8_2:64960101-64960120 None:intergenic 35.0%
TCGTTTGGGAAATGTTAAAC+AGG + chr8_2:64960100-64960119 Msa1262310:intron 35.0%
CTTCCTATTATCTTCCTGTA+AGG + chr8_2:64960259-64960278 Msa1262310:intron 35.0%
AGACCTTACAGGAAGATAAT+AGG - chr8_2:64960265-64960284 None:intergenic 35.0%
ACAATGTTAATTGGTCAACG+AGG - chr8_2:64960318-64960337 None:intergenic 35.0%
GCTAACTATATATGCACATG+CGG - chr8_2:64960369-64960388 None:intergenic 35.0%
TCGAAGACATCAATGTCAAA+TGG - chr8_2:64960393-64960412 None:intergenic 35.0%
CATTGATGTCTTCGAACATT+TGG + chr8_2:64960398-64960417 Msa1262310:intron 35.0%
CGACAACAATTCAAGAAACA+TGG + chr8_2:64960742-64960761 Msa1262310:intron 35.0%
GTCTTAAACTTCTCAACAAC+CGG + chr8_2:64960845-64960864 Msa1262310:intron 35.0%
AACAATATTCCCACTGCATA+AGG + chr8_2:64961015-64961034 Msa1262310:intron 35.0%
GCATAAGGAAAGACATCTTT+CGG + chr8_2:64961030-64961049 Msa1262310:intron 35.0%
CATAAGGAAAGACATCTTTC+GGG + chr8_2:64961031-64961050 Msa1262310:intron 35.0%
! TTTTGTCAGCATCAGATGAT+AGG - chr8_2:64961080-64961099 None:intergenic 35.0%
TTCAACACAATGTTCGTACA+CGG + chr8_2:64961122-64961141 Msa1262310:intron 35.0%
GCTCATTATTTGTGATGCAA+AGG - chr8_2:64961599-64961618 None:intergenic 35.0%
TACACCAATCAACTTTCGTA+CGG + chr8_2:64961926-64961945 Msa1262310:intron 35.0%
TAGTCAACTCAAGTCATGTA+TGG + chr8_2:64962189-64962208 Msa1262310:intron 35.0%
AACGACATCTAAGTTCAGTT+GGG - chr8_2:64962277-64962296 None:intergenic 35.0%
AAACGACATCTAAGTTCAGT+TGG - chr8_2:64962278-64962297 None:intergenic 35.0%
AACTGAACTTAGATGTCGTT+TGG + chr8_2:64962277-64962296 Msa1262310:intron 35.0%
ATAAATATATGCCAAGTCCG+AGG - chr8_2:64962488-64962507 None:intergenic 35.0%
GAGAAACAATTTAAGGAGCA+TGG + chr8_2:64962700-64962719 Msa1262310:intron 35.0%
!! TTGTTACATTGTTGGTGTCA+TGG + chr8_2:64962858-64962877 Msa1262310:intron 35.0%
ATCTCTCTTCAATTCACGTT+GGG - chr8_2:64963475-64963494 None:intergenic 35.0%
TGAAAAAAAACCGGGTCAAA+CGG + chr8_2:64963661-64963680 Msa1262310:intron 35.0%
GAGAAGTTGGAAAAAAAACC+GGG + chr8_2:64964356-64964375 Msa1262310:intron 35.0%
GATACCTTAATCTCCTACAA+CGG + chr8_2:64964385-64964404 Msa1262310:intron 35.0%
AAAAATTGTGAGGGGCAAAA+TGG + chr8_2:64964518-64964537 Msa1262310:intron 35.0%
ATTTCACCCATAAAAAGGTG+AGG + chr8_2:64964544-64964563 Msa1262310:intron 35.0%
! GAATTTCTCATTTTGCCCTT+GGG - chr8_2:64964616-64964635 None:intergenic 35.0%
! TGAATTTCTCATTTTGCCCT+TGG - chr8_2:64964617-64964636 None:intergenic 35.0%
GGGCAAAATGAGAAATTCAT+AGG + chr8_2:64964618-64964637 Msa1262310:intron 35.0%
AGTAGAATTACACTCATCCA+TGG - chr8_2:64964699-64964718 None:intergenic 35.0%
! GTGAAGGAGTGAAGTGTTAT+CGG - chr8_2:64956517-64956536 None:intergenic 40.0%
! TCTGAAGTGAAGTGAAGTGA+AGG - chr8_2:64956533-64956552 None:intergenic 40.0%
CACTTCAGACCAAGCTATAA+TGG + chr8_2:64956544-64956563 Msa1262310:exon 40.0%
AAGATTGCGCCATTATAGCT+TGG - chr8_2:64956556-64956575 None:intergenic 40.0%
CCTTCATTGGAAAAGCCTTT+CGG - chr8_2:64956744-64956763 None:intergenic 40.0%
ACACGTCTTCAATCAAAGGT+TGG - chr8_2:64956896-64956915 None:intergenic 40.0%
! ACAAATCTATGAAGCACTCC+GGG - chr8_2:64957027-64957046 None:intergenic 40.0%
! AAATGGAATCAAGGAGGCAT+AGG - chr8_2:64957201-64957220 None:intergenic 40.0%
TACTGATCTACCAAAGGCTA+TGG - chr8_2:64957269-64957288 None:intergenic 40.0%
! CTACTGTACTGATCTACCAA+AGG - chr8_2:64957275-64957294 None:intergenic 40.0%
! AGGATCCTTAAAGAGTACAC+CGG + chr8_2:64957437-64957456 Msa1262310:intron 40.0%
TTACAGGGGTCTTACTAAAG+AGG - chr8_2:64957468-64957487 None:intergenic 40.0%
ATGCAGCTATGACAAGTATC+AGG - chr8_2:64957599-64957618 None:intergenic 40.0%
GCTACAGAAGATAGTAGCAA+AGG + chr8_2:64957656-64957675 Msa1262310:CDS 40.0%
!! TGTGCTGATTGTACTGGAAA+TGG + chr8_2:64957704-64957723 Msa1262310:CDS 40.0%
CGTGAGATAACCCAATAGTT+TGG + chr8_2:64957972-64957991 Msa1262310:intron 40.0%
TCAATGCATCAAGCGTCTTA+TGG + chr8_2:64958183-64958202 Msa1262310:intron 40.0%
AGCTTCGCCTAAATCTTTCA+TGG - chr8_2:64958431-64958450 None:intergenic 40.0%
TGTGTACATTCTATTGCACC+TGG - chr8_2:64958537-64958556 None:intergenic 40.0%
! TTCAATGGCCGATTTAAAGC+TGG + chr8_2:64958591-64958610 Msa1262310:CDS 40.0%
TTTGTGTGGAAGCTGTAATG+GGG + chr8_2:64958788-64958807 Msa1262310:CDS 40.0%
!!! TGTAATGGGGCTGGTTTTAT+TGG + chr8_2:64958801-64958820 Msa1262310:CDS 40.0%
TTGCCGAGAACATATGTTAG+AGG - chr8_2:64959472-64959491 None:intergenic 40.0%
TCGACAAGCAAGCTCAAAAA+AGG - chr8_2:64959566-64959585 None:intergenic 40.0%
!! TATCTCATTTGGGAAGTGCT+AGG + chr8_2:64959629-64959648 Msa1262310:intron 40.0%
!! CACATTGTTGGTTCCTTCAT+TGG - chr8_2:64959818-64959837 None:intergenic 40.0%
! GTGGGAAGTGGTTCAATTTT+GGG - chr8_2:64959958-64959977 None:intergenic 40.0%
AAAATTACTTGCGTGGGAAG+TGG - chr8_2:64959970-64959989 None:intergenic 40.0%
AGTTATACTGTCTCTGTGTC+TGG + chr8_2:64960023-64960042 Msa1262310:intron 40.0%
ATTGTTCTTGACACCTCGTT+TGG + chr8_2:64960085-64960104 Msa1262310:intron 40.0%
TTGTTCTTGACACCTCGTTT+GGG + chr8_2:64960086-64960105 Msa1262310:intron 40.0%
TTTCCAAACTGTCTCAGGTT+AGG - chr8_2:64960630-64960649 None:intergenic 40.0%
! CGATTTTTCCAAACTGTCTC+AGG - chr8_2:64960635-64960654 None:intergenic 40.0%
TCTGAGCTTGAGAACTGTTA+AGG + chr8_2:64960716-64960735 Msa1262310:intron 40.0%
GATGTCTTTCCTTATGCAGT+GGG - chr8_2:64961027-64961046 None:intergenic 40.0%
AGATGTCTTTCCTTATGCAG+TGG - chr8_2:64961028-64961047 None:intergenic 40.0%
CTGGATTCTTGGATTGTGAA+TGG - chr8_2:64961646-64961665 None:intergenic 40.0%
! GAAAATAGGATTTGGAGTGC+TGG - chr8_2:64961665-64961684 None:intergenic 40.0%
TTCGTACGGCTCAATCATAT+AGG + chr8_2:64961940-64961959 Msa1262310:intron 40.0%
TGCTATGTGGAGTATAGTAG+AGG - chr8_2:64962123-64962142 None:intergenic 40.0%
! GGTCTCAGAAGCATGAAAAA+AGG + chr8_2:64962210-64962229 Msa1262310:intron 40.0%
!!! CGTTTGGCCAAGGTTTTTTA+CGG + chr8_2:64962293-64962312 Msa1262310:intron 40.0%
! GTGAGTTTAGCTCAGATGAT+TGG - chr8_2:64962519-64962538 None:intergenic 40.0%
CATCTCTCTTCAATTCACGT+TGG - chr8_2:64963476-64963495 None:intergenic 40.0%
GATTTAGATACCGTTTGACC+CGG - chr8_2:64963674-64963693 None:intergenic 40.0%
GGTATCTAAATCTCCCACAA+CGG + chr8_2:64963682-64963701 Msa1262310:intron 40.0%
TGTGTGTGTATATATTCGCG+AGG + chr8_2:64963896-64963915 Msa1262310:intron 40.0%
ATATTCGCGAGGTTGAAGAA+AGG + chr8_2:64963907-64963926 Msa1262310:intron 40.0%
ATTGCCGTTGTAGGAGATTA+AGG - chr8_2:64964392-64964411 None:intergenic 40.0%
! TTGCCACCTCACCTTTTTAT+GGG - chr8_2:64964553-64964572 None:intergenic 40.0%
! TTTGCCACCTCACCTTTTTA+TGG - chr8_2:64964554-64964573 None:intergenic 40.0%
TGGTAATTCGGTTGTCCGAA+AGG + chr8_2:64956726-64956745 Msa1262310:CDS 45.0%
! CCGAAAGGCTTTTCCAATGA+AGG + chr8_2:64956741-64956760 Msa1262310:CDS 45.0%
CTGGACACGTCTTCAATCAA+AGG - chr8_2:64956900-64956919 None:intergenic 45.0%
!! TGTCCAGTGTTGACATGTTC+TGG + chr8_2:64956913-64956932 Msa1262310:intron 45.0%
ACACCAGAACATGTCAACAC+TGG - chr8_2:64956919-64956938 None:intergenic 45.0%
GGATATGTCAGGGCTATGTT+TGG + chr8_2:64957061-64957080 Msa1262310:intron 45.0%
! GGATCCTTAAAGAGTACACC+GGG + chr8_2:64957438-64957457 Msa1262310:intron 45.0%
! GATCCTTAAAGAGTACACCG+GGG + chr8_2:64957439-64957458 Msa1262310:intron 45.0%
! ATCCTTAAAGAGTACACCGG+GGG + chr8_2:64957440-64957459 Msa1262310:intron 45.0%
TCTTACTAAAGAGGTTCCCC+CGG - chr8_2:64957459-64957478 None:intergenic 45.0%
!! GTCGAACATCATGCTGATTC+CGG + chr8_2:64957897-64957916 Msa1262310:intron 45.0%
CAAAGACACTATGTTCTCGC+CGG - chr8_2:64957923-64957942 None:intergenic 45.0%
GCTCCCCAACTCCAAATAAT+TGG - chr8_2:64958087-64958106 None:intergenic 45.0%
CGAGGAAAAAGAGAAGGACA+TGG - chr8_2:64958217-64958236 None:intergenic 45.0%
TGTACACAATGCCAAGGTTC+TGG + chr8_2:64958549-64958568 Msa1262310:CDS 45.0%
! AATGGCCGATTTAAAGCTGG+TGG + chr8_2:64958594-64958613 Msa1262310:CDS 45.0%
!! TTAAAGCTGGTGGACTATGC+TGG + chr8_2:64958604-64958623 Msa1262310:CDS 45.0%
!!! AATGGGGCTGGTTTTATTGG+TGG + chr8_2:64958804-64958823 Msa1262310:CDS 45.0%
! CGTGGGAAGTGGTTCAATTT+TGG - chr8_2:64959959-64959978 None:intergenic 45.0%
!! TTCATAGCTTGCTCTATCGG+CGG + chr8_2:64959988-64960007 Msa1262310:intron 45.0%
TCTCAACAACCGGATGATGT+AGG + chr8_2:64960855-64960874 Msa1262310:intron 45.0%
GCTCATCAACCTACATCATC+CGG - chr8_2:64960867-64960886 None:intergenic 45.0%
GTAACAATTGGTCAGGTTCG+AGG - chr8_2:64960892-64960911 None:intergenic 45.0%
GGTTTCTTTCCAGTCCCAAT+TGG + chr8_2:64961143-64961162 Msa1262310:intron 45.0%
AAGACAACACCAATTGGGAC+TGG - chr8_2:64961155-64961174 None:intergenic 45.0%
!! GATTTGGAGTGCTGGATTCT+TGG - chr8_2:64961657-64961676 None:intergenic 45.0%
! TGAGCCGTACGAAAGTTGAT+TGG - chr8_2:64961933-64961952 None:intergenic 45.0%
! ACTTAGATGTCGTTTGGCCA+AGG + chr8_2:64962283-64962302 Msa1262310:intron 45.0%
TCATCTGAGCTAAACTCACG+AGG + chr8_2:64962520-64962539 Msa1262310:intron 45.0%
TGTGTGTGTGTGTATTTGCG+AGG + chr8_2:64963197-64963216 Msa1262310:intron 45.0%
! ACCTCTTTTCAACTCACGCT+GGG - chr8_2:64964176-64964195 None:intergenic 45.0%
!! GATTAAGGTATCGCTTGACC+CGG - chr8_2:64964377-64964396 None:intergenic 45.0%
TGCTTCTACATTGCCGTTGT+AGG - chr8_2:64964401-64964420 None:intergenic 45.0%
TCACCCATAAAAAGGTGAGG+TGG + chr8_2:64964547-64964566 Msa1262310:intron 45.0%
TTACAAAAATGCCCCTCCCA+AGG + chr8_2:64964597-64964616 Msa1262310:intron 45.0%
TACAAAAATGCCCCTCCCAA+GGG + chr8_2:64964598-64964617 Msa1262310:intron 45.0%
! TTCTCATTTTGCCCTTGGGA+GGG - chr8_2:64964612-64964631 None:intergenic 45.0%
! TTTCTCATTTTGCCCTTGGG+AGG - chr8_2:64964613-64964632 None:intergenic 45.0%
!! ACATATAATTTATAAAATAA+AGG + chr8_2:64960185-64960204 Msa1262310:intron 5.0%
!!! TTCTTATATTTAATTTTTTT+TGG - chr8_2:64963409-64963428 None:intergenic 5.0%
!!! GTTTTTAAAAATATAAAAAT+TGG + chr8_2:64963755-64963774 Msa1262310:intron 5.0%
!! AAAAAGATAATAAAATTAAA+TGG + chr8_2:64964051-64964070 Msa1262310:intron 5.0%
ACATGTCTCAGTCGTTGTCC+CGG + chr8_2:64957006-64957025 Msa1262310:intron 50.0%
TTCCCCCGGTGTACTCTTTA+AGG - chr8_2:64957445-64957464 None:intergenic 50.0%
!! AACATCATGCTGATTCCGGC+CGG + chr8_2:64957901-64957920 Msa1262310:intron 50.0%
TTACAAACCCGTGCTTCGCA+CGG + chr8_2:64958996-64959015 Msa1262310:intron 50.0%
TATTGAACCCGTGCGAAGCA+CGG - chr8_2:64959007-64959026 None:intergenic 50.0%
TTGCTCTATCGGCGGTAATG+AGG + chr8_2:64959996-64960015 Msa1262310:intron 50.0%
TGGCCTAACCTGAGACAGTT+TGG + chr8_2:64960624-64960643 Msa1262310:intron 50.0%
TGCTTCTACACTGCCGTTGT+GGG - chr8_2:64963698-64963717 None:intergenic 50.0%
TTGCTTCTACACTGCCGTTG+TGG - chr8_2:64963699-64963718 None:intergenic 50.0%
! TCCCAGCGTGAGTTGAAAAG+AGG + chr8_2:64964172-64964191 Msa1262310:intron 50.0%
! CACCTCTTTTCAACTCACGC+TGG - chr8_2:64964177-64964196 None:intergenic 50.0%
! TCTCATTTTGCCCTTGGGAG+GGG - chr8_2:64964611-64964630 None:intergenic 50.0%
! GTGGACTATGCTGGCTATGC+AGG + chr8_2:64958613-64958632 Msa1262310:CDS 55.0%
! TGTGGAAGCTGTAATGGGGC+TGG + chr8_2:64958792-64958811 Msa1262310:CDS 55.0%
TACAAACCCGTGCTTCGCAC+GGG + chr8_2:64958997-64959016 Msa1262310:intron 55.0%
ATTGAACCCGTGCGAAGCAC+GGG - chr8_2:64959006-64959025 None:intergenic 55.0%
GACACTATGTTCTCGCCGGC+CGG - chr8_2:64957919-64957938 None:intergenic 60.0%
CAAGTCCGAGGTTCGAACCC+CGG - chr8_2:64962476-64962495 None:intergenic 60.0%
GGTGTCCGGGGTTCGAACCT+CGG + chr8_2:64962468-64962487 Msa1262310:intron 65.0%
CGGGGTTCGAACCTCGGACT+TGG + chr8_2:64962474-64962493 Msa1262310:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 64956485 64964759 64956485 ID=Msa1262310;Name=Msa1262310
chr8_2 mRNA 64956485 64964759 64956485 ID=Msa1262310-mRNA-1;Parent=Msa1262310;Name=Msa1262310-mRNA-1;_AED=0.33;_eAED=0.33;_QI=78|1|1|1|0.8|0.66|6|232|133
chr8_2 exon 64956485 64956620 64956485 ID=Msa1262310-mRNA-1:exon:21013;Parent=Msa1262310-mRNA-1
chr8_2 exon 64956716 64956813 64956716 ID=Msa1262310-mRNA-1:exon:21014;Parent=Msa1262310-mRNA-1
chr8_2 exon 64957656 64957725 64957656 ID=Msa1262310-mRNA-1:exon:21015;Parent=Msa1262310-mRNA-1
chr8_2 exon 64958538 64958634 64958538 ID=Msa1262310-mRNA-1:exon:21016;Parent=Msa1262310-mRNA-1
chr8_2 exon 64958773 64958990 64958773 ID=Msa1262310-mRNA-1:exon:21017;Parent=Msa1262310-mRNA-1
chr8_2 exon 64964667 64964759 64964667 ID=Msa1262310-mRNA-1:exon:21018;Parent=Msa1262310-mRNA-1
chr8_2 five_prime_UTR 64956485 64956562 64956485 ID=Msa1262310-mRNA-1:five_prime_utr;Parent=Msa1262310-mRNA-1
chr8_2 CDS 64956563 64956620 64956563 ID=Msa1262310-mRNA-1:cds;Parent=Msa1262310-mRNA-1
chr8_2 CDS 64956716 64956813 64956716 ID=Msa1262310-mRNA-1:cds;Parent=Msa1262310-mRNA-1
chr8_2 CDS 64957656 64957725 64957656 ID=Msa1262310-mRNA-1:cds;Parent=Msa1262310-mRNA-1
chr8_2 CDS 64958538 64958634 64958538 ID=Msa1262310-mRNA-1:cds;Parent=Msa1262310-mRNA-1
chr8_2 CDS 64958773 64958851 64958773 ID=Msa1262310-mRNA-1:cds;Parent=Msa1262310-mRNA-1
chr8_2 three_prime_UTR 64958852 64958990 64958852 ID=Msa1262310-mRNA-1:three_prime_utr;Parent=Msa1262310-mRNA-1
chr8_2 three_prime_UTR 64964667 64964759 64964667 ID=Msa1262310-mRNA-1:three_prime_utr;Parent=Msa1262310-mRNA-1
Gene Sequence

>Msa1262310

ATGGCGCAATCTTTGTCTTTTGCTCCTATTTGTTCCTTGAAATCTTCAAACACACCTGGAGCTGTTATTGGTAATTCGGTTGTCCGAAAGGCTTTTCCAATGAAGGAAGTTTGTCTGAATTCTAAAGATGGAAACTTTCAGTCTTTGGTAGTTAAGGCTACAGAAGATAGTAGCAAAGGCACAACAAAAATGAAGAGCATTGTTTGTGCTGATTGTACTGGAAATGGTGCAATAGAATGTACACAATGCCAAGGTTCTGGAGTTAATTTGATAGATCACTTCAATGGCCGATTTAAAGCTGGTGGACTATGCTGGCTATGCAGGGGTAAAAAGGATATTTTGTGTGGAAGCTGTAATGGGGCTGGTTTTATTGGTGGATTCATGAGCACATTTGATGATTAG

Protein sequence

>Msa1262310

MAQSLSFAPICSLKSSNTPGAVIGNSVVRKAFPMKEVCLNSKDGNFQSLVVKATEDSSKGTTKMKSIVCADCTGNGAIECTQCQGSGVNLIDHFNGRFKAGGLCWLCRGKKDILCGSCNGAGFIGGFMSTFDD*