Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0540550 | XP_013455328.1 | 97.107 | 242 | 6 | 1 | 1 | 242 | 1 | 241 | 1.61e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0540550 | sp|O24464|KCY_PRUAR | 59.833 | 239 | 88 | 2 | 1 | 239 | 1 | 231 | 7.21e-102 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0540550 | A0A072UI20 | 97.107 | 242 | 6 | 1 | 1 | 242 | 1 | 241 | 7.71e-174 | 487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008840 | Msa0540550 | 0.801534 | 8.605192e-49 | -8.615850e-47 |
| Msa0020390 | Msa0540550 | 0.812473 | 4.166157e-51 | -8.615850e-47 |
| Msa0029260 | Msa0540550 | 0.809794 | 1.586763e-50 | -8.615850e-47 |
| Msa0033880 | Msa0540550 | 0.802908 | 4.487383e-49 | -8.615850e-47 |
| Msa0036540 | Msa0540550 | 0.807443 | 5.043008e-50 | -8.615850e-47 |
| Msa0042280 | Msa0540550 | 0.815648 | 8.301161e-52 | -8.615850e-47 |
| Msa0047160 | Msa0540550 | 0.805465 | 1.317819e-49 | -8.615850e-47 |
| Msa0048180 | Msa0540550 | 0.809607 | 1.740147e-50 | -8.615850e-47 |
| Msa0052610 | Msa0540550 | 0.800649 | 1.305414e-48 | -8.615850e-47 |
| Msa0068020 | Msa0540550 | 0.800456 | 1.429006e-48 | -8.615850e-47 |
| Msa0090520 | Msa0540550 | 0.804179 | 2.445434e-49 | -8.615850e-47 |
| Msa0111330 | Msa0540550 | 0.801609 | 8.305726e-49 | -8.615850e-47 |
| Msa0115370 | Msa0540550 | 0.802515 | 5.408792e-49 | -8.615850e-47 |
| Msa0126840 | Msa0540550 | 0.818428 | 1.970392e-52 | -8.615850e-47 |
| Msa0126880 | Msa0540550 | 0.803345 | 3.643947e-49 | -8.615850e-47 |
| Msa0127040 | Msa0540550 | 0.808859 | 2.518337e-50 | -8.615850e-47 |
| Msa0136120 | Msa0540550 | 0.803693 | 3.085736e-49 | -8.615850e-47 |
| Msa0137990 | Msa0540550 | 0.800659 | 1.299020e-48 | -8.615850e-47 |
| Msa0142410 | Msa0540550 | 0.804173 | 2.452536e-49 | -8.615850e-47 |
| Msa0166750 | Msa0540550 | 0.812192 | 4.797216e-51 | -8.615850e-47 |
| Msa0167480 | Msa0540550 | 0.822387 | 2.434252e-53 | -8.615850e-47 |
| Msa0169300 | Msa0540550 | 0.804086 | 2.557588e-49 | -8.615850e-47 |
| Msa0174000 | Msa0540550 | 0.800793 | 1.219888e-48 | -8.615850e-47 |
| Msa0183870 | Msa0540550 | 0.806646 | 7.435240e-50 | -8.615850e-47 |
| Msa0183900 | Msa0540550 | 0.808077 | 3.697937e-50 | -8.615850e-47 |
| Msa0188350 | Msa0540550 | 0.800456 | 1.429260e-48 | -8.615850e-47 |
| Msa0197530 | Msa0540550 | 0.809635 | 1.716751e-50 | -8.615850e-47 |
| Msa0209500 | Msa0540550 | 0.821240 | 4.486555e-53 | -8.615850e-47 |
| Msa0226460 | Msa0540550 | 0.806512 | 7.937047e-50 | -8.615850e-47 |
| Msa0231100 | Msa0540550 | 0.833311 | 5.735510e-56 | -8.615850e-47 |
| Msa0365860 | Msa0540550 | 0.805810 | 1.115238e-49 | -8.615850e-47 |
| Msa0376690 | Msa0540550 | 0.813779 | 2.153118e-51 | -8.615850e-47 |
| Msa0384880 | Msa0540550 | 0.828363 | 9.370598e-55 | -8.615850e-47 |
| Msa0385500 | Msa0540550 | 0.809347 | 1.979526e-50 | -8.615850e-47 |
| Msa0419720 | Msa0540550 | 0.818154 | 2.272661e-52 | -8.615850e-47 |
| Msa0427860 | Msa0540550 | -0.822441 | 2.365541e-53 | -8.615850e-47 |
| Msa0436200 | Msa0540550 | 0.818773 | 1.645911e-52 | -8.615850e-47 |
| Msa0437020 | Msa0540550 | 0.804833 | 1.786958e-49 | -8.615850e-47 |
| Msa0443390 | Msa0540550 | 0.841666 | 4.138283e-58 | -8.615850e-47 |
| Msa0450480 | Msa0540550 | 0.800717 | 1.263991e-48 | -8.615850e-47 |
| Msa0458060 | Msa0540550 | 0.809410 | 1.918286e-50 | -8.615850e-47 |
| Msa0474090 | Msa0540550 | -0.818912 | 1.530335e-52 | -8.615850e-47 |
| Msa0241830 | Msa0540550 | 0.812606 | 3.895834e-51 | -8.615850e-47 |
| Msa0244980 | Msa0540550 | 0.806421 | 8.293461e-50 | -8.615850e-47 |
| Msa0249580 | Msa0540550 | 0.832660 | 8.329272e-56 | -8.615850e-47 |
| Msa0257490 | Msa0540550 | 0.816524 | 5.290000e-52 | -8.615850e-47 |
| Msa0262480 | Msa0540550 | 0.827929 | 1.192103e-54 | -8.615850e-47 |
| Msa0275360 | Msa0540550 | 0.824454 | 8.002988e-54 | -8.615850e-47 |
| Msa0283420 | Msa0540550 | 0.814327 | 1.629964e-51 | -8.615850e-47 |
| Msa0296250 | Msa0540550 | 0.814983 | 1.166809e-51 | -8.615850e-47 |
| Msa0296790 | Msa0540550 | 0.820501 | 6.633191e-53 | -8.615850e-47 |
| Msa0296920 | Msa0540550 | 0.805476 | 1.310753e-49 | -8.615850e-47 |
| Msa0300350 | Msa0540550 | 0.812710 | 3.697131e-51 | -8.615850e-47 |
| Msa0304590 | Msa0540550 | 0.834178 | 3.483179e-56 | -8.615850e-47 |
| Msa0304660 | Msa0540550 | 0.850345 | 1.802854e-60 | -8.615850e-47 |
| Msa0315850 | Msa0540550 | 0.810196 | 1.299722e-50 | -8.615850e-47 |
| Msa0320590 | Msa0540550 | 0.807722 | 4.398701e-50 | -8.615850e-47 |
| Msa0321690 | Msa0540550 | 0.807780 | 4.277058e-50 | -8.615850e-47 |
| Msa0322900 | Msa0540550 | 0.800278 | 1.553563e-48 | -8.615850e-47 |
| Msa0331700 | Msa0540550 | 0.850490 | 1.641711e-60 | -8.615850e-47 |
| Msa0357900 | Msa0540550 | 0.801920 | 7.171058e-49 | -8.615850e-47 |
| Msa0360990 | Msa0540550 | 0.815538 | 8.783051e-52 | -8.615850e-47 |
| Msa0506400 | Msa0540550 | 0.806391 | 8.417678e-50 | -8.615850e-47 |
| Msa0511770 | Msa0540550 | 0.830105 | 3.542387e-55 | -8.615850e-47 |
| Msa0523810 | Msa0540550 | 0.818973 | 1.482175e-52 | -8.615850e-47 |
| Msa0524590 | Msa0540550 | 0.808133 | 3.597258e-50 | -8.615850e-47 |
| Msa0531650 | Msa0540550 | 0.810480 | 1.128654e-50 | -8.615850e-47 |
| Msa0534750 | Msa0540550 | 0.813448 | 2.546619e-51 | -8.615850e-47 |
| Msa0534900 | Msa0540550 | 0.829744 | 4.338137e-55 | -8.615850e-47 |
| Msa0540550 | Msa0547990 | 0.817718 | 2.851264e-52 | -8.615850e-47 |
| Msa0540550 | Msa0550540 | 0.805315 | 1.416822e-49 | -8.615850e-47 |
| Msa0540550 | Msa0550570 | 0.800939 | 1.138754e-48 | -8.615850e-47 |
| Msa0540550 | Msa0581110 | 0.812040 | 5.177134e-51 | -8.615850e-47 |
| Msa0540550 | Msa0581130 | 0.808196 | 3.488604e-50 | -8.615850e-47 |
| Msa0540550 | Msa0593700 | 0.811286 | 7.554123e-51 | -8.615850e-47 |
| Msa0540550 | Msa0602370 | 0.813292 | 2.756023e-51 | -8.615850e-47 |
| Msa0540550 | Msa0603570 | 0.826049 | 3.356510e-54 | -8.615850e-47 |
| Msa0540550 | Msa0610390 | 0.817756 | 2.795294e-52 | -8.615850e-47 |
| Msa0540550 | Msa0612720 | 0.823244 | 1.537806e-53 | -8.615850e-47 |
| Msa0540550 | Msa0615580 | 0.863760 | 1.977942e-64 | -8.615850e-47 |
| Msa0540550 | Msa0615680 | 0.805725 | 1.162112e-49 | -8.615850e-47 |
| Msa0540550 | Msa0616240 | 0.821877 | 3.196353e-53 | -8.615850e-47 |
| Msa0540550 | Msa0616870 | -0.800766 | 1.235514e-48 | -8.615850e-47 |
| Msa0540550 | Msa0631350 | 0.824596 | 7.410733e-54 | -8.615850e-47 |
| Msa0540550 | Msa0633570 | 0.807346 | 5.287588e-50 | -8.615850e-47 |
| Msa0540550 | Msa0642970 | 0.814145 | 1.788052e-51 | -8.615850e-47 |
| Msa0540550 | Msa0643320 | 0.811963 | 5.382342e-51 | -8.615850e-47 |
| Msa0540550 | Msa0650920 | 0.805904 | 1.065769e-49 | -8.615850e-47 |
| Msa0540550 | Msa0666230 | 0.829728 | 4.375533e-55 | -8.615850e-47 |
| Msa0540550 | Msa0669720 | 0.856473 | 3.141326e-62 | -8.615850e-47 |
| Msa0540550 | Msa0669760 | 0.839513 | 1.515245e-57 | -8.615850e-47 |
| Msa0540550 | Msa0672100 | 0.810436 | 1.154028e-50 | -8.615850e-47 |
| Msa0540550 | Msa0675000 | 0.941890 | 1.886414e-101 | -8.615850e-47 |
| Msa0540550 | Msa0683140 | 0.804248 | 2.366709e-49 | -8.615850e-47 |
| Msa0540550 | Msa0699570 | 0.813158 | 2.948454e-51 | -8.615850e-47 |
| Msa0540550 | Msa0719420 | 0.811705 | 6.124794e-51 | -8.615850e-47 |
| Msa0540550 | Msa0748920 | 0.814618 | 1.405449e-51 | -8.615850e-47 |
| Msa0540550 | Msa0751010 | 0.826859 | 2.152871e-54 | -8.615850e-47 |
| Msa0540550 | Msa0789680 | 0.810365 | 1.194951e-50 | -8.615850e-47 |
| Msa0540550 | Msa0794050 | 0.832432 | 9.485210e-56 | -8.615850e-47 |
| Msa0540550 | Msa0800370 | 0.832844 | 7.496420e-56 | -8.615850e-47 |
| Msa0540550 | Msa0806880 | 0.806842 | 6.757454e-50 | -8.615850e-47 |
| Msa0540550 | Msa0818770 | 0.830198 | 3.361184e-55 | -8.615850e-47 |
| Msa0540550 | Msa0826500 | 0.800730 | 1.256293e-48 | -8.615850e-47 |
| Msa0540550 | Msa0833190 | -0.803963 | 2.712495e-49 | -8.615850e-47 |
| Msa0540550 | Msa0879850 | 0.809337 | 1.989403e-50 | -8.615850e-47 |
| Msa0540550 | Msa0901110 | 0.811161 | 8.038869e-51 | -8.615850e-47 |
| Msa0540550 | Msa0905990 | 0.806196 | 9.252328e-50 | -8.615850e-47 |
| Msa0540550 | Msa0913240 | 0.836495 | 9.050307e-57 | -8.615850e-47 |
| Msa0540550 | Msa0944200 | 0.816117 | 6.523245e-52 | -8.615850e-47 |
| Msa0540550 | Msa0944610 | 0.844875 | 5.763502e-59 | -8.615850e-47 |
| Msa0540550 | Msa0997430 | 0.800981 | 1.116502e-48 | -8.615850e-47 |
| Msa0540550 | Msa1019240 | 0.825330 | 4.971169e-54 | -8.615850e-47 |
| Msa0540550 | Msa1019260 | 0.824717 | 6.939367e-54 | -8.615850e-47 |
| Msa0540550 | Msa1027250 | 0.803792 | 2.943273e-49 | -8.615850e-47 |
| Msa0540550 | Msa1027300 | 0.801581 | 8.416433e-49 | -8.615850e-47 |
| Msa0540550 | Msa1072710 | 0.802351 | 5.847506e-49 | -8.615850e-47 |
| Msa0540550 | Msa1084500 | -0.819945 | 8.897925e-53 | -8.615850e-47 |
| Msa0540550 | Msa1104210 | 0.824736 | 6.868572e-54 | -8.615850e-47 |
| Msa0540550 | Msa1122820 | 0.810699 | 1.012358e-50 | -8.615850e-47 |
| Msa0540550 | Msa1123350 | 0.808233 | 3.424817e-50 | -8.615850e-47 |
| Msa0540550 | Msa1125790 | -0.824314 | 8.633740e-54 | -8.615850e-47 |
| Msa0540550 | Msa1126830 | 0.816762 | 4.678411e-52 | -8.615850e-47 |
| Msa0540550 | Msa1126850 | 0.804714 | 1.892171e-49 | -8.615850e-47 |
| Msa0540550 | Msa1127540 | 0.802767 | 4.798343e-49 | -8.615850e-47 |
| Msa0540550 | Msa1131560 | 0.862258 | 5.757244e-64 | -8.615850e-47 |
| Msa0540550 | Msa1132310 | 0.809482 | 1.851410e-50 | -8.615850e-47 |
| Msa0540550 | Msa1165780 | 0.856463 | 3.162415e-62 | -8.615850e-47 |
| Msa0540550 | Msa1165960 | 0.809445 | 1.885358e-50 | -8.615850e-47 |
| Msa0540550 | Msa1166870 | 0.844613 | 6.782524e-59 | -8.615850e-47 |
| Msa0540550 | Msa1179950 | 0.801675 | 8.051815e-49 | -8.615850e-47 |
| Msa0540550 | Msa1179980 | 0.817646 | 2.959682e-52 | -8.615850e-47 |
| Msa0540550 | Msa1202580 | 0.846701 | 1.841233e-59 | -8.615850e-47 |
| Msa0540550 | Msa1206270 | 0.804044 | 2.609014e-49 | -8.615850e-47 |
| Msa0540550 | Msa1211830 | 0.827939 | 1.185880e-54 | -8.615850e-47 |
| Msa0540550 | Msa1262890 | 0.813528 | 2.445552e-51 | -8.615850e-47 |
| Msa0540550 | Msa1264210 | 0.829505 | 4.957475e-55 | -8.615850e-47 |
| Msa0540550 | Msa1265590 | 0.827730 | 1.330959e-54 | -8.615850e-47 |
| Msa0540550 | Msa1265630 | 0.803481 | 3.415205e-49 | -8.615850e-47 |
| Msa0540550 | Msa1270620 | 0.830895 | 2.269224e-55 | -8.615850e-47 |
| Msa0540550 | Msa1270690 | 0.821861 | 3.223291e-53 | -8.615850e-47 |
| Msa0540550 | Msa1275110 | 0.802727 | 4.889743e-49 | -8.615850e-47 |
| Msa0540550 | Msa1276970 | 0.802043 | 6.766174e-49 | -8.615850e-47 |
| Msa0540550 | Msa1296830 | 0.838248 | 3.218263e-57 | -8.615850e-47 |
| Msa0540550 | Msa1299700 | 0.827184 | 1.799438e-54 | -8.615850e-47 |
| Msa0540550 | Msa1302380 | 0.804541 | 2.055802e-49 | -8.615850e-47 |
| Msa0540550 | Msa1303580 | 0.816098 | 6.589087e-52 | -8.615850e-47 |
| Msa0540550 | Msa1306990 | 0.806537 | 7.839571e-50 | -8.615850e-47 |
| Msa0540550 | Msa1331250 | 0.823093 | 1.667636e-53 | -8.615850e-47 |
| Msa0540550 | Msa1332220 | 0.822533 | 2.250894e-53 | -8.615850e-47 |
| Msa0540550 | Msa1332590 | 0.825789 | 3.870577e-54 | -8.615850e-47 |
| Msa0540550 | Msa1336560 | 0.832652 | 8.363559e-56 | -8.615850e-47 |
| Msa0540550 | Msa1349570 | 0.808392 | 3.167120e-50 | -8.615850e-47 |
| Msa0540550 | Msa1351540 | 0.865707 | 4.858094e-65 | -8.615850e-47 |
| Msa0540550 | Msa1359270 | 0.800983 | 1.115540e-48 | -8.615850e-47 |
| Msa0540550 | Msa1391480 | 0.801332 | 9.467411e-49 | -8.615850e-47 |
| Msa0540550 | Msa1411950 | 0.802311 | 5.958563e-49 | -8.615850e-47 |
| Msa0540550 | Msa1413500 | 0.800524 | 1.384119e-48 | -8.615850e-47 |
| Msa0540550 | Msa1422810 | 0.831413 | 1.693111e-55 | -8.615850e-47 |
| Msa0540550 | Msa1433600 | 0.826419 | 2.740989e-54 | -8.615850e-47 |
| Msa0540550 | Msa1454450 | 0.838333 | 3.059957e-57 | -8.615850e-47 |
| Msa0540550 | Msa1454680 | 0.830386 | 3.023333e-55 | -8.615850e-47 |
| Msa0540550 | Msa1458090 | 0.836808 | 7.531666e-57 | -8.615850e-47 |
| Msa0540550 | Msa1459960 | 0.828597 | 8.228927e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0540550 | MtrunA17_Chr4g0018221 | 97.107 | 242 | 6 | 1 | 1 | 242 | 1 | 241 | 1.49e-177 | 487 |
| Msa0540550 | MtrunA17_Chr5g0428971 | 87.603 | 242 | 6 | 2 | 1 | 242 | 1 | 218 | 7.56e-152 | 421 |
| Msa0540550 | MtrunA17_Chr8g0337051 | 58.421 | 190 | 79 | 0 | 52 | 241 | 18 | 207 | 2.12e-79 | 237 |
| Msa0540550 | MtrunA17_Chr4g0017231 | 34.559 | 136 | 81 | 3 | 45 | 178 | 82 | 211 | 1.14e-19 | 85.9 |
| Msa0540550 | MtrunA17_Chr2g0305051 | 24.775 | 222 | 137 | 5 | 45 | 239 | 62 | 280 | 3.14e-18 | 83.6 |
| Msa0540550 | MtrunA17_Chr1g0181801 | 24.413 | 213 | 116 | 4 | 61 | 230 | 117 | 327 | 2.16e-16 | 77.0 |
| Msa0540550 | MtrunA17_Chr4g0057771 | 27.143 | 210 | 120 | 4 | 59 | 235 | 33 | 242 | 3.62e-16 | 75.1 |
| Msa0540550 | MtrunA17_Chr7g0263541 | 24.107 | 224 | 125 | 3 | 50 | 230 | 31 | 252 | 5.52e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0540550 | AT4G25280.1 | 68.020 | 197 | 63 | 0 | 43 | 239 | 41 | 237 | 3.41e-97 | 285 |
| Msa0540550 | AT4G25280.2 | 68.020 | 197 | 63 | 0 | 43 | 239 | 41 | 237 | 3.41e-97 | 285 |
| Msa0540550 | AT3G60180.1 | 59.358 | 187 | 76 | 0 | 50 | 236 | 16 | 202 | 2.43e-80 | 240 |
| Msa0540550 | AT3G60180.2 | 59.358 | 187 | 76 | 0 | 50 | 236 | 16 | 202 | 2.43e-80 | 240 |
| Msa0540550 | AT5G26667.3 | 61.111 | 180 | 70 | 0 | 56 | 235 | 15 | 194 | 4.43e-78 | 234 |
| Msa0540550 | AT5G26667.2 | 61.111 | 180 | 70 | 0 | 56 | 235 | 15 | 194 | 4.43e-78 | 234 |
| Msa0540550 | AT5G26667.4 | 61.111 | 180 | 70 | 0 | 56 | 235 | 15 | 194 | 4.43e-78 | 234 |
| Msa0540550 | AT5G26667.1 | 61.111 | 180 | 70 | 0 | 56 | 235 | 15 | 194 | 6.51e-78 | 234 |
| Msa0540550 | AT3G60961.1 | 58.647 | 133 | 51 | 1 | 108 | 236 | 2 | 134 | 8.63e-52 | 165 |
| Msa0540550 | AT5G47840.2 | 30.317 | 221 | 140 | 7 | 22 | 230 | 31 | 249 | 3.43e-25 | 100 |
| Msa0540550 | AT5G47840.1 | 34.375 | 160 | 100 | 4 | 22 | 178 | 31 | 188 | 4.04e-25 | 100 |
| Msa0540550 | AT5G63400.1 | 30.288 | 208 | 112 | 4 | 61 | 235 | 39 | 246 | 8.71e-21 | 88.2 |
| Msa0540550 | AT5G35170.1 | 26.442 | 208 | 123 | 5 | 58 | 238 | 82 | 286 | 2.78e-20 | 89.7 |
| Msa0540550 | AT5G35170.2 | 26.442 | 208 | 123 | 5 | 58 | 238 | 82 | 286 | 3.03e-20 | 89.7 |
| Msa0540550 | AT2G37250.1 | 24.686 | 239 | 133 | 5 | 36 | 230 | 32 | 267 | 5.50e-18 | 81.3 |
| Msa0540550 | AT5G50370.1 | 29.293 | 198 | 107 | 4 | 61 | 225 | 40 | 237 | 8.90e-17 | 77.4 |
| Msa0540550 | AT2G39270.1 | 25.381 | 197 | 102 | 3 | 61 | 214 | 70 | 264 | 7.68e-16 | 75.5 |
| Msa0540550 | AT5G63400.2 | 32.787 | 122 | 78 | 2 | 61 | 178 | 39 | 160 | 3.06e-12 | 63.9 |
| Msa0540550 | AT5G50370.2 | 27.684 | 177 | 95 | 4 | 61 | 204 | 40 | 216 | 1.13e-11 | 63.2 |
Find 62 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCACCATCTCTTCTTC+AGG | 0.214393 | 4_1:-22901417 | None:intergenic |
| GAGCAAATCAGCCAGGAATT+TGG | 0.247846 | 4_1:-22902833 | None:intergenic |
| ATGCGGTTCTCCTCACTTCT+AGG | 0.250539 | 4_1:-22900958 | None:intergenic |
| TGGATCGCCTTTACACTTTC+AGG | 0.259735 | 4_1:+22897885 | Msa0540550:CDS |
| TCAAAACAGCGCGATGATTC+TGG | 0.264727 | 4_1:+22900831 | Msa0540550:intron |
| TTGTGAGAGCATCGTAAATT+TGG | 0.285319 | 4_1:+22902748 | Msa0540550:three_prime_UTR |
| AATCGTAAGTTTCTTATTGA+TGG | 0.289268 | 4_1:+22900931 | Msa0540550:CDS |
| ATGGTTTCCGACAGTGAATA+TGG | 0.306208 | 4_1:+22900735 | Msa0540550:CDS |
| TTGGTTCTAGCGAAAGGATT+TGG | 0.306697 | 4_1:+22903022 | Msa0540550:three_prime_UTR |
| TTACCTGTGTGATGTGAAAA+AGG | 0.308101 | 4_1:-22897736 | None:intergenic |
| TATAACCGAATCCATATGTT+TGG | 0.320695 | 4_1:-22899556 | None:intergenic |
| GCAAGAATTGTTGAAACATT+TGG | 0.322361 | 4_1:+22900672 | Msa0540550:CDS |
| TCGTAAATTTGGGTGAAGTA+TGG | 0.333501 | 4_1:+22902759 | Msa0540550:three_prime_UTR |
| CGCTAGAACCAACATATTGT+TGG | 0.364819 | 4_1:-22903011 | None:intergenic |
| CGTGATTTCTCCCAAACATA+TGG | 0.371968 | 4_1:+22899545 | Msa0540550:CDS |
| ATTTGATAATAACCTGATTA+CGG | 0.389843 | 4_1:-22901449 | None:intergenic |
| ATGAAATATTTGAGCAAGTT+CGG | 0.399297 | 4_1:+22902254 | Msa0540550:CDS |
| TGCCTTTAGTATCTTAAAGA+AGG | 0.401794 | 4_1:+22903113 | Msa0540550:three_prime_UTR |
| ACGGGTGCTGAGCCGTAATC+AGG | 0.406509 | 4_1:+22901437 | Msa0540550:CDS |
| TTCTCCCAAACATATGGATT+CGG | 0.410215 | 4_1:+22899551 | Msa0540550:CDS |
| TCAAAGAAAAGAACAAAATC+TGG | 0.410965 | 4_1:-22901390 | None:intergenic |
| CATTGCCATAGATTTATCTC+TGG | 0.430367 | 4_1:+22897865 | Msa0540550:CDS |
| GCGATCCAGAGATAAATCTA+TGG | 0.432864 | 4_1:-22897870 | None:intergenic |
| ATTCTAAGAGAGATGCAATA+TGG | 0.435899 | 4_1:+22900904 | Msa0540550:CDS |
| ATAACCGAATCCATATGTTT+GGG | 0.442781 | 4_1:-22899555 | None:intergenic |
| AATTCCTGGCTGATTTGCTC+TGG | 0.446154 | 4_1:+22902836 | Msa0540550:three_prime_UTR |
| AGCTACAAGATCCAAATTCC+TGG | 0.446239 | 4_1:+22902822 | Msa0540550:three_prime_UTR |
| TCCCTTCTTTAAGATACTAA+AGG | 0.456295 | 4_1:-22903115 | None:intergenic |
| GTTTCACCATCTCTTCTTCA+GGG | 0.464125 | 4_1:-22901416 | None:intergenic |
| ATCTACTGTTATTCCTGTCA+AGG | 0.473309 | 4_1:-22902944 | None:intergenic |
| TGAAGAAGAGATGGTGAAAC+GGG | 0.483819 | 4_1:+22901419 | Msa0540550:CDS |
| TGTGAGAGCATCGTAAATTT+GGG | 0.491439 | 4_1:+22902749 | Msa0540550:three_prime_UTR |
| GAAACGTCTTAAAGTATTCG+AGG | 0.497453 | 4_1:+22901570 | Msa0540550:CDS |
| GCCTTTAGTATCTTAAAGAA+GGG | 0.515319 | 4_1:+22903114 | Msa0540550:three_prime_UTR |
| GGATTTAAGCATCTGAGTGC+TGG | 0.521519 | 4_1:+22900693 | Msa0540550:CDS |
| AATCTGACAGTCACCGCTGA+TGG | 0.523930 | 4_1:-22900880 | None:intergenic |
| GTCGAATCGTAACCCTTGAC+AGG | 0.530453 | 4_1:+22902931 | Msa0540550:three_prime_UTR |
| TTACCGTAAAACTCATCCAC+TGG | 0.533946 | 4_1:+22902862 | Msa0540550:three_prime_UTR |
| TGCGGTTCTCCTCACTTCTA+GGG | 0.534418 | 4_1:-22900957 | None:intergenic |
| AGTTAATACCAACAATATGT+TGG | 0.536815 | 4_1:+22903003 | Msa0540550:three_prime_UTR |
| TGCATGAAAGCTGTGTGAAT+AGG | 0.540671 | 4_1:+22902721 | Msa0540550:exon |
| TGGTTTCCGACAGTGAATAT+GGG | 0.541266 | 4_1:+22900736 | Msa0540550:CDS |
| TATAGTACCTGAAAGTGTAA+AGG | 0.547370 | 4_1:-22897892 | None:intergenic |
| TCTACTGTTATTCCTGTCAA+GGG | 0.548709 | 4_1:-22902943 | None:intergenic |
| TTTGCATAATGATCAATCAC+AGG | 0.554235 | 4_1:-22901604 | None:intergenic |
| AATATGTTGGTTCTAGCGAA+AGG | 0.556726 | 4_1:+22903016 | Msa0540550:three_prime_UTR |
| TTTAAAGTGACTGGTTGTAA+CGG | 0.566306 | 4_1:+22902890 | Msa0540550:three_prime_UTR |
| TAGCTAACTAGAAGTTAACT+AGG | 0.567149 | 4_1:-22902804 | None:intergenic |
| AATTCAAGAAACAGAAAATG+TGG | 0.570280 | 4_1:+22897678 | Msa0540550:exon |
| ATCTCCGCAGATCAATGCTG+TGG | 0.571341 | 4_1:+22902222 | Msa0540550:intron |
| CTGAAGAAGAGATGGTGAAA+CGG | 0.581877 | 4_1:+22901418 | Msa0540550:CDS |
| ATTCTGGAAACAATAAGAGA+AGG | 0.596485 | 4_1:+22900847 | Msa0540550:CDS |
| AAATTACCCATATTCACTGT+CGG | 0.597914 | 4_1:-22900742 | None:intergenic |
| ATTTCCAGAGCAAATCAGCC+AGG | 0.600652 | 4_1:-22902840 | None:intergenic |
| AAGTGATGATTTGAATGAAG+AGG | 0.606557 | 4_1:-22897711 | None:intergenic |
| TGATGGTTTCCCTAGAAGTG+AGG | 0.612889 | 4_1:+22900948 | Msa0540550:CDS |
| TGATTGCCCTGAAGAAGAGA+TGG | 0.623914 | 4_1:+22901410 | Msa0540550:CDS |
| GTCACTTTAAAATTCTCCAG+TGG | 0.630321 | 4_1:-22902878 | None:intergenic |
| AGGAAGAATCGTTCCATCAG+CGG | 0.632469 | 4_1:+22900867 | Msa0540550:CDS |
| TCTCCGCAGATCAATGCTGT+GGG | 0.641952 | 4_1:+22902223 | Msa0540550:intron |
| GATCAATGCTGTGGGAACAG+AGG | 0.655407 | 4_1:+22902231 | Msa0540550:intron |
| CAATATGTTCAAAAGCTATG+CGG | 0.685079 | 4_1:-22900975 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATTTATTATTAGATT+TGG | + | chr4_1:22899822-22899841 | Msa0540550:intron | 10.0% |
| !! | TTTCTATAACATAAATTTAA+GGG | - | chr4_1:22901027-22901046 | None:intergenic | 10.0% |
| !!! | CAATTAATTTTTTTATAATG+AGG | + | chr4_1:22902361-22902380 | Msa0540550:intron | 10.0% |
| !! | GTATAAAAAAAATATATTGA+GGG | + | chr4_1:22903086-22903105 | Msa0540550:three_prime_UTR | 10.0% |
| !!! | TTTTTATATACTAACTTCAA+AGG | - | chr4_1:22899017-22899036 | None:intergenic | 15.0% |
| !!! | TTTTTTATACCTTATACTTT+AGG | + | chr4_1:22899166-22899185 | Msa0540550:intron | 15.0% |
| !!! | TATTTATTATTAGATTTGGT+AGG | + | chr4_1:22899826-22899845 | Msa0540550:intron | 15.0% |
| !! | ATGTAAAAGTTATTTGAAAA+TGG | + | chr4_1:22900313-22900332 | Msa0540550:intron | 15.0% |
| !!! | TTTTTTTTTATATGTTTCCT+CGG | + | chr4_1:22900778-22900797 | Msa0540550:intron | 15.0% |
| !! | CTTTCTATAACATAAATTTA+AGG | - | chr4_1:22901028-22901047 | None:intergenic | 15.0% |
| !! | NNGTATAATAAACAATAAAG+AGG | - | chr4_1:22901169-22901188 | None:intergenic | 15.0% |
| !! | ATAAAATATCTATAACCAAA+AGG | - | chr4_1:22901747-22901766 | None:intergenic | 15.0% |
| !!! | ATTTTATTAACTATCCTTTA+AGG | + | chr4_1:22901760-22901779 | Msa0540550:intron | 15.0% |
| !! | CGTATAAAAAAAATATATTG+AGG | + | chr4_1:22903085-22903104 | Msa0540550:three_prime_UTR | 15.0% |
| !!! | CATCTATGTAAAATGATTTT+AGG | + | chr4_1:22898042-22898061 | Msa0540550:intron | 20.0% |
| !!! | AATTTGTTCAACTTTATTTC+TGG | + | chr4_1:22898092-22898111 | Msa0540550:intron | 20.0% |
| !!! | ATTTGTTCAACTTTATTTCT+GGG | + | chr4_1:22898093-22898112 | Msa0540550:intron | 20.0% |
| !!! | AAAATTGATTTTGTTATGTC+TGG | - | chr4_1:22898857-22898876 | None:intergenic | 20.0% |
| !!! | ATCATTTTTATGTGTATGTT+TGG | - | chr4_1:22898920-22898939 | None:intergenic | 20.0% |
| !! | TTTATTTGTTCCTTTCTAAT+TGG | + | chr4_1:22899275-22899294 | Msa0540550:intron | 20.0% |
| !!! | TTAAAGTATTGACTGTATTA+CGG | + | chr4_1:22899615-22899634 | Msa0540550:intron | 20.0% |
| !!! | TAGACTTATATATTTTGTTG+CGG | - | chr4_1:22899899-22899918 | None:intergenic | 20.0% |
| !!! | TGTTACTATGTTTAAAATCA+AGG | + | chr4_1:22899958-22899977 | Msa0540550:intron | 20.0% |
| !!! | ATGTTTAAAATCAAGGATTT+TGG | + | chr4_1:22899965-22899984 | Msa0540550:intron | 20.0% |
| !!! | TGTTTAAAATCAAGGATTTT+GGG | + | chr4_1:22899966-22899985 | Msa0540550:intron | 20.0% |
| !! | AATAATCTAATTAACCTAGA+TGG | - | chr4_1:22900027-22900046 | None:intergenic | 20.0% |
| !! | AATACAAAAATATTCTAACC+AGG | - | chr4_1:22900152-22900171 | None:intergenic | 20.0% |
| !!! | GAATATTTTTGTATTTGATG+TGG | + | chr4_1:22900157-22900176 | Msa0540550:intron | 20.0% |
| !! | AACACAGAATTAGAAAATTA+TGG | - | chr4_1:22900258-22900277 | None:intergenic | 20.0% |
| !!! | ATTCCTTAATTCATTTTAGT+CGG | - | chr4_1:22900472-22900491 | None:intergenic | 20.0% |
| !!! | ATTCTATTCACTATTGTTTT+TGG | + | chr4_1:22900565-22900584 | Msa0540550:intron | 20.0% |
| !! | TTAATGAGTTGTTATAGTAT+AGG | + | chr4_1:22901084-22901103 | Msa0540550:intron | 20.0% |
| !! | TAATGAGTTGTTATAGTATA+GGG | + | chr4_1:22901085-22901104 | Msa0540550:intron | 20.0% |
| !!! | ATTTGATAATAACCTGATTA+CGG | - | chr4_1:22901452-22901471 | None:intergenic | 20.0% |
| !! | TGTTGAATTCAAATAAAAAC+TGG | - | chr4_1:22901663-22901682 | None:intergenic | 20.0% |
| !! | ATATTCAGTTTAATGTCTAA+CGG | + | chr4_1:22901805-22901824 | Msa0540550:intron | 20.0% |
| !!! | CTTAAATTATGATTTGACTT+GGG | + | chr4_1:22901865-22901884 | Msa0540550:intron | 20.0% |
| !!! | ATTTAGATATATGTTTGTTG+TGG | + | chr4_1:22901888-22901907 | Msa0540550:intron | 20.0% |
| !! | AAAAAAATTAATTGTGTACG+TGG | - | chr4_1:22902355-22902374 | None:intergenic | 20.0% |
| !! | ATTAGTATTGCAAGTTATTA+AGG | + | chr4_1:22902447-22902466 | Msa0540550:intron | 20.0% |
| !!! | ATATTCCAAAACACTATTTT+TGG | + | chr4_1:22902577-22902596 | Msa0540550:intron | 20.0% |
| !!! | TATTCCAAAACACTATTTTT+GGG | + | chr4_1:22902578-22902597 | Msa0540550:intron | 20.0% |
| !! | AATATTAATACACAAAGAGA+TGG | - | chr4_1:22902648-22902667 | None:intergenic | 20.0% |
| !!! | TTTCTTGAATTGATTTTGTG+GGG | - | chr4_1:22897669-22897688 | None:intergenic | 25.0% |
| !!! | GTTTCTTGAATTGATTTTGT+GGG | - | chr4_1:22897670-22897689 | None:intergenic | 25.0% |
| !!! | TGTTTCTTGAATTGATTTTG+TGG | - | chr4_1:22897671-22897690 | None:intergenic | 25.0% |
| ! | AATTCAAGAAACAGAAAATG+TGG | + | chr4_1:22897678-22897697 | Msa0540550:exon | 25.0% |
| !! | TTAAATGTTGTTGTTAATCG+AGG | + | chr4_1:22898148-22898167 | Msa0540550:intron | 25.0% |
| ! | CATTGAATAATTGATGTATC+TGG | + | chr4_1:22898366-22898385 | Msa0540550:intron | 25.0% |
| ! | ATCTAGTAATTTGAAGATCT+AGG | + | chr4_1:22898542-22898561 | Msa0540550:intron | 25.0% |
| ! | TCTAGTAATTTGAAGATCTA+GGG | + | chr4_1:22898543-22898562 | Msa0540550:intron | 25.0% |
| !!! | CTTTTTAAAAGATGAGAATC+CGG | - | chr4_1:22898637-22898656 | None:intergenic | 25.0% |
| ! | TTTCACATGAATGTATTCAA+AGG | - | chr4_1:22898740-22898759 | None:intergenic | 25.0% |
| !!! | ATTTTGTTATGTCTGGATTA+GGG | - | chr4_1:22898850-22898869 | None:intergenic | 25.0% |
| ! | GTTTATCTAACCAATTAGAA+AGG | - | chr4_1:22899288-22899307 | None:intergenic | 25.0% |
| ! | ATAATACAATCATGAGTTTG+TGG | + | chr4_1:22899348-22899367 | Msa0540550:intron | 25.0% |
| !!! | TCGGTTATAACTTTTGTTTT+AGG | + | chr4_1:22899570-22899589 | Msa0540550:CDS | 25.0% |
| ! | TAATTACAAAAATGCTACCT+TGG | - | chr4_1:22899647-22899666 | None:intergenic | 25.0% |
| ! | CTTGCAATTAACATTATGTA+TGG | + | chr4_1:22899789-22899808 | Msa0540550:intron | 25.0% |
| !!! | ATCTTTGAAGTTACAAGAAA+AGG | - | chr4_1:22899873-22899892 | None:intergenic | 25.0% |
| ! | TTGTTCTCATTATATCTATC+TGG | + | chr4_1:22900366-22900385 | Msa0540550:intron | 25.0% |
| ! | CTGGATATTATTACACAAAT+TGG | + | chr4_1:22900385-22900404 | Msa0540550:intron | 25.0% |
| ! | AAACCGACTAAAATGAATTA+AGG | + | chr4_1:22900466-22900485 | Msa0540550:intron | 25.0% |
| ! | ATAGAATCGTAAAAAACATG+CGG | - | chr4_1:22900552-22900571 | None:intergenic | 25.0% |
| !!! | TATTCACTATTGTTTTTGGT+TGG | + | chr4_1:22900569-22900588 | Msa0540550:intron | 25.0% |
| ! | AATCGTAAGTTTCTTATTGA+TGG | + | chr4_1:22900931-22900950 | Msa0540550:CDS | 25.0% |
| ! | TCATTAACATTAGAAAGAAG+AGG | - | chr4_1:22901071-22901090 | None:intergenic | 25.0% |
| ! | AATAAACAATAAAGAGGATG+TGG | - | chr4_1:22901163-22901182 | None:intergenic | 25.0% |
| ! | TCAAAGAAAAGAACAAAATC+TGG | - | chr4_1:22901393-22901412 | None:intergenic | 25.0% |
| ! | ATTGATCATTATGCAAAAAG+AGG | + | chr4_1:22901610-22901629 | Msa0540550:CDS | 25.0% |
| ! | TTGATCATTATGCAAAAAGA+GGG | + | chr4_1:22901611-22901630 | Msa0540550:CDS | 25.0% |
| ! | ATAACCAAAAGGTTAAGAAA+AGG | - | chr4_1:22901736-22901755 | None:intergenic | 25.0% |
| ! | GCTTAAATTATGATTTGACT+TGG | + | chr4_1:22901864-22901883 | Msa0540550:intron | 25.0% |
| ! | TATAACAATGTGATTAAGAG+TGG | + | chr4_1:22901915-22901934 | Msa0540550:intron | 25.0% |
| ! | TTCGGTAACATATATATCAA+CGG | - | chr4_1:22901995-22902014 | None:intergenic | 25.0% |
| ! | CAAGTAAAGACAAATTTACT+TGG | - | chr4_1:22902028-22902047 | None:intergenic | 25.0% |
| ! | ATGAAATATTTGAGCAAGTT+CGG | + | chr4_1:22902254-22902273 | Msa0540550:CDS | 25.0% |
| ! | AGCTAATAAAACACTTTAGA+GGG | - | chr4_1:22902486-22902505 | None:intergenic | 25.0% |
| ! | ATGCTTAATAAAACTCATGA+TGG | - | chr4_1:22902525-22902544 | None:intergenic | 25.0% |
| ! | AGTTAATACCAACAATATGT+TGG | + | chr4_1:22903003-22903022 | Msa0540550:three_prime_UTR | 25.0% |
| AAGTGATGATTTGAATGAAG+AGG | - | chr4_1:22897714-22897733 | None:intergenic | 30.0% | |
| ! | TTTGATTCGTTTCTGATTCT+AGG | + | chr4_1:22897816-22897835 | Msa0540550:intron | 30.0% |
| ! | TATAGTACCTGAAAGTGTAA+AGG | - | chr4_1:22897895-22897914 | None:intergenic | 30.0% |
| TTAATCGAGGAATTATGAGT+TGG | + | chr4_1:22898161-22898180 | Msa0540550:intron | 30.0% | |
| AGTACATGTCAAATGGTAAA+AGG | - | chr4_1:22898220-22898239 | None:intergenic | 30.0% | |
| AAGTGAAAAGGCTTATGAAA+AGG | - | chr4_1:22898253-22898272 | None:intergenic | 30.0% | |
| AATACACTGCAAAAGTGAAA+AGG | - | chr4_1:22898265-22898284 | None:intergenic | 30.0% | |
| AAAAGTGAGTAGTGTAATCA+AGG | + | chr4_1:22898288-22898307 | Msa0540550:intron | 30.0% | |
| TCAAATATAAGCAATGCATC+TGG | - | chr4_1:22898400-22898419 | None:intergenic | 30.0% | |
| ! | TTGCTTATATTTGAGACTAG+AGG | + | chr4_1:22898406-22898425 | Msa0540550:intron | 30.0% |
| ! | TGCTTATATTTGAGACTAGA+GGG | + | chr4_1:22898407-22898426 | Msa0540550:intron | 30.0% |
| CTGATACATCTATTCACAAA+GGG | - | chr4_1:22898443-22898462 | None:intergenic | 30.0% | |
| TCTGATACATCTATTCACAA+AGG | - | chr4_1:22898444-22898463 | None:intergenic | 30.0% | |
| CTAGTAATTTGAAGATCTAG+GGG | + | chr4_1:22898544-22898563 | Msa0540550:intron | 30.0% | |
| TTCAAAGATTCCTTGTAGTT+AGG | + | chr4_1:22898582-22898601 | Msa0540550:intron | 30.0% | |
| TCAAAGATTCCTTGTAGTTA+GGG | + | chr4_1:22898583-22898602 | Msa0540550:intron | 30.0% | |
| TGAATTGAATAAAACGAGCT+AGG | + | chr4_1:22898761-22898780 | Msa0540550:intron | 30.0% | |
| !! | TTTTGTTATGTCTGGATTAG+GGG | - | chr4_1:22898849-22898868 | None:intergenic | 30.0% |
| !! | GATTTTGTTATGTCTGGATT+AGG | - | chr4_1:22898851-22898870 | None:intergenic | 30.0% |
| TACTAACTTCAAAGGCTATT+GGG | - | chr4_1:22899009-22899028 | None:intergenic | 30.0% | |
| ATACTAACTTCAAAGGCTAT+TGG | - | chr4_1:22899010-22899029 | None:intergenic | 30.0% | |
| ATATACTTTAGTGACCAAGT+AGG | + | chr4_1:22899102-22899121 | Msa0540550:intron | 30.0% | |
| ATACTTGAAGGACTAAATTG+AGG | + | chr4_1:22899135-22899154 | Msa0540550:intron | 30.0% | |
| TATTTGAAAGACACACTCTT+CGG | - | chr4_1:22899456-22899475 | None:intergenic | 30.0% | |
| ATAACCGAATCCATATGTTT+GGG | - | chr4_1:22899558-22899577 | None:intergenic | 30.0% | |
| TATAACCGAATCCATATGTT+TGG | - | chr4_1:22899559-22899578 | None:intergenic | 30.0% | |
| CTGAGACATTCACAAAATTA+CGG | - | chr4_1:22899721-22899740 | None:intergenic | 30.0% | |
| ! | GAAAGTTGATTGATCACTAA+TGG | + | chr4_1:22900084-22900103 | Msa0540550:intron | 30.0% |
| TGAAATAAGAACTACAACTC+TGG | + | chr4_1:22900218-22900237 | Msa0540550:intron | 30.0% | |
| TAGAATCGTAAAAAACATGC+GGG | - | chr4_1:22900551-22900570 | None:intergenic | 30.0% | |
| GCAAGAATTGTTGAAACATT+TGG | + | chr4_1:22900672-22900691 | Msa0540550:CDS | 30.0% | |
| AAATTACCCATATTCACTGT+CGG | - | chr4_1:22900745-22900764 | None:intergenic | 30.0% | |
| ! | ATTCTGGAAACAATAAGAGA+AGG | + | chr4_1:22900847-22900866 | Msa0540550:CDS | 30.0% |
| ! | ATTCTAAGAGAGATGCAATA+TGG | + | chr4_1:22900904-22900923 | Msa0540550:CDS | 30.0% |
| CAATATGTTCAAAAGCTATG+CGG | - | chr4_1:22900978-22900997 | None:intergenic | 30.0% | |
| CATAATAAAGAGTGATTACG+TGG | - | chr4_1:22901355-22901374 | None:intergenic | 30.0% | |
| TTTGCATAATGATCAATCAC+AGG | - | chr4_1:22901607-22901626 | None:intergenic | 30.0% | |
| TTCAGTAGAATATCATTCAC+TGG | + | chr4_1:22901960-22901979 | Msa0540550:intron | 30.0% | |
| TCAGTAGAATATCATTCACT+GGG | + | chr4_1:22901961-22901980 | Msa0540550:intron | 30.0% | |
| TCGGTAACATATATATCAAC+GGG | - | chr4_1:22901994-22902013 | None:intergenic | 30.0% | |
| !! | TCTTTACTTGTTTTCTATCG+TGG | + | chr4_1:22902038-22902057 | Msa0540550:intron | 30.0% |
| !! | CTTTACTTGTTTTCTATCGT+GGG | + | chr4_1:22902039-22902058 | Msa0540550:intron | 30.0% |
| AAAAAAATCAGCTTGTCACA+TGG | + | chr4_1:22902151-22902170 | Msa0540550:intron | 30.0% | |
| ACTTGCAATACTAATGAACA+AGG | - | chr4_1:22902442-22902461 | None:intergenic | 30.0% | |
| CAGCTAATAAAACACTTTAG+AGG | - | chr4_1:22902487-22902506 | None:intergenic | 30.0% | |
| !! | TAAAACTCATGATGGATGTA+TGG | - | chr4_1:22902517-22902536 | None:intergenic | 30.0% |
| ! | ACTACCCAAAAATAGTGTTT+TGG | - | chr4_1:22902585-22902604 | None:intergenic | 30.0% |
| TCTAAATTATAAGTCCACCT+TGG | + | chr4_1:22902619-22902638 | Msa0540550:intron | 30.0% | |
| TAGCTAACTAGAAGTTAACT+AGG | - | chr4_1:22902807-22902826 | None:intergenic | 30.0% | |
| ! | TTTAAAGTGACTGGTTGTAA+CGG | + | chr4_1:22902890-22902909 | Msa0540550:three_prime_UTR | 30.0% |
| TGCCTTTAGTATCTTAAAGA+AGG | + | chr4_1:22903113-22903132 | Msa0540550:three_prime_UTR | 30.0% | |
| TACCTGTGTGATGTGAAAAA+GGG | - | chr4_1:22897738-22897757 | None:intergenic | 35.0% | |
| TTACCTGTGTGATGTGAAAA+AGG | - | chr4_1:22897739-22897758 | None:intergenic | 35.0% | |
| ! | ATTCGTTTCTGATTCTAGGA+AGG | + | chr4_1:22897820-22897839 | Msa0540550:intron | 35.0% |
| CATTGCCATAGATTTATCTC+TGG | + | chr4_1:22897865-22897884 | Msa0540550:CDS | 35.0% | |
| GAAAAGGCTTATGAAAAGGA+CGG | - | chr4_1:22898249-22898268 | None:intergenic | 35.0% | |
| ATATAAGCAATGCATCTGGT+CGG | - | chr4_1:22898396-22898415 | None:intergenic | 35.0% | |
| ! | GTAGTTTTCCGATTTTTGTC+CGG | + | chr4_1:22898615-22898634 | Msa0540550:intron | 35.0% |
| ATGAGAATCCGGACAAAAAT+CGG | - | chr4_1:22898626-22898645 | None:intergenic | 35.0% | |
| ! | TATGTTTGGTTTCACTTTGG+AGG | - | chr4_1:22898906-22898925 | None:intergenic | 35.0% |
| ! | GTGTATGTTTGGTTTCACTT+TGG | - | chr4_1:22898909-22898928 | None:intergenic | 35.0% |
| AGCATCAAGCCTAAAGTATA+AGG | - | chr4_1:22899178-22899197 | None:intergenic | 35.0% | |
| TTCTCCCAAACATATGGATT+CGG | + | chr4_1:22899551-22899570 | Msa0540550:CDS | 35.0% | |
| ! | AGCTAATGCATGTTGATTGT+TGG | + | chr4_1:22899918-22899937 | Msa0540550:intron | 35.0% |
| ! | TTGGGAAGTATAGTCAATGA+TGG | + | chr4_1:22899984-22900003 | Msa0540550:intron | 35.0% |
| TAGTCAATGATGGTTAATGC+TGG | + | chr4_1:22899994-22900013 | Msa0540550:intron | 35.0% | |
| CAATCAACTTTCACTTACTC+TGG | - | chr4_1:22900076-22900095 | None:intergenic | 35.0% | |
| TTTGATGTGGTTGTTCTGTT+AGG | + | chr4_1:22900170-22900189 | Msa0540550:intron | 35.0% | |
| ACACAAATTGGCATGACTAA+AGG | + | chr4_1:22900397-22900416 | Msa0540550:intron | 35.0% | |
| ACTAAAGGCTAACCATACAA+TGG | + | chr4_1:22900412-22900431 | Msa0540550:intron | 35.0% | |
| AGTTAAGCTTAGCCATTGTA+TGG | - | chr4_1:22900427-22900446 | None:intergenic | 35.0% | |
| TTAGAAAGAAGAGGCAAAAG+AGG | - | chr4_1:22901062-22901081 | None:intergenic | 35.0% | |
| AAAGCATACAAAATCAGAGC+TGG | - | chr4_1:22901122-22901141 | None:intergenic | 35.0% | |
| TCACTCTTTATTATGCAGAC+TGG | + | chr4_1:22901360-22901379 | Msa0540550:intron | 35.0% | |
| ! | GAAACGTCTTAAAGTATTCG+AGG | + | chr4_1:22901570-22901589 | Msa0540550:CDS | 35.0% |
| AAAAAGAGGGAGACTTCATA+GGG | + | chr4_1:22901624-22901643 | Msa0540550:CDS | 35.0% | |
| ! | CAGTTTTTCTATGCAAGTCA+AGG | - | chr4_1:22901713-22901732 | None:intergenic | 35.0% |
| ! | ACTGCCTTTTCTTAACCTTT+TGG | + | chr4_1:22901729-22901748 | Msa0540550:intron | 35.0% |
| TCAGTTTAATGTCTAACGGT+TGG | + | chr4_1:22901809-22901828 | Msa0540550:intron | 35.0% | |
| CAGTTTAATGTCTAACGGTT+GGG | + | chr4_1:22901810-22901829 | Msa0540550:intron | 35.0% | |
| ATTTAAGCCAAACGCACAAA+AGG | - | chr4_1:22901852-22901871 | None:intergenic | 35.0% | |
| TTACTTGGACAGTTTCAGTT+CGG | - | chr4_1:22902013-22902032 | None:intergenic | 35.0% | |
| ! | TTTTGCCATCTGATTCAAAC+GGG | - | chr4_1:22902076-22902095 | None:intergenic | 35.0% |
| ! | GTTTTGCCATCTGATTCAAA+CGG | - | chr4_1:22902077-22902096 | None:intergenic | 35.0% |
| ! | AGTCTCTTTCTCAGTTTTCT+CGG | + | chr4_1:22902098-22902117 | Msa0540550:intron | 35.0% |
| CATGGTTGTACATTTCTTTC+TGG | + | chr4_1:22902169-22902188 | Msa0540550:intron | 35.0% | |
| TTACAAATGCTCAAGATGCT+TGG | + | chr4_1:22902327-22902346 | Msa0540550:intron | 35.0% | |
| CACCTAAAATGTAAGGACTT+AGG | + | chr4_1:22902411-22902430 | Msa0540550:intron | 35.0% | |
| ! | GTCCTAAGTCCTTACATTTT+AGG | - | chr4_1:22902416-22902435 | None:intergenic | 35.0% |
| AAAATGTAAGGACTTAGGAC+CGG | + | chr4_1:22902416-22902435 | Msa0540550:intron | 35.0% | |
| ! | ATGCCTTTATTTGCTTCTGT+GGG | + | chr4_1:22902543-22902562 | Msa0540550:intron | 35.0% |
| AGAGTGATACAAGTGATTAG+AGG | - | chr4_1:22902689-22902708 | None:intergenic | 35.0% | |
| !! | TTGTGAGAGCATCGTAAATT+TGG | + | chr4_1:22902748-22902767 | Msa0540550:three_prime_UTR | 35.0% |
| !! | TGTGAGAGCATCGTAAATTT+GGG | + | chr4_1:22902749-22902768 | Msa0540550:three_prime_UTR | 35.0% |
| TCGTAAATTTGGGTGAAGTA+TGG | + | chr4_1:22902759-22902778 | Msa0540550:three_prime_UTR | 35.0% | |
| !! | GTCACTTTAAAATTCTCCAG+TGG | - | chr4_1:22902881-22902900 | None:intergenic | 35.0% |
| !!! | CTGGAGAATTTTAAAGTGAC+TGG | + | chr4_1:22902881-22902900 | Msa0540550:three_prime_UTR | 35.0% |
| TCTACTGTTATTCCTGTCAA+GGG | - | chr4_1:22902946-22902965 | None:intergenic | 35.0% | |
| ATCTACTGTTATTCCTGTCA+AGG | - | chr4_1:22902947-22902966 | None:intergenic | 35.0% | |
| !! | AATATGTTGGTTCTAGCGAA+AGG | + | chr4_1:22903016-22903035 | Msa0540550:three_prime_UTR | 35.0% |
| !! | TTCCCTTTTTCACATCACAC+AGG | + | chr4_1:22897733-22897752 | Msa0540550:CDS | 40.0% |
| GCGATCCAGAGATAAATCTA+TGG | - | chr4_1:22897873-22897892 | None:intergenic | 40.0% | |
| GAAGGGTAGTACATGTCAAA+TGG | - | chr4_1:22898227-22898246 | None:intergenic | 40.0% | |
| TCCTTGTAGTTAGGGATGAA+AGG | + | chr4_1:22898591-22898610 | Msa0540550:intron | 40.0% | |
| TCCTTTCATCCCTAACTACA+AGG | - | chr4_1:22898595-22898614 | None:intergenic | 40.0% | |
| AACTTCAAAGGCTATTGGGA+TGG | - | chr4_1:22899005-22899024 | None:intergenic | 40.0% | |
| GTATCACTATCTCTCCTACT+TGG | - | chr4_1:22899119-22899138 | None:intergenic | 40.0% | |
| GGAGAGATAGTGATACTTGA+AGG | + | chr4_1:22899123-22899142 | Msa0540550:intron | 40.0% | |
| CAAAGGGAACAAAGAAAGAC+AGG | - | chr4_1:22899511-22899530 | None:intergenic | 40.0% | |
| TTCTTTGTTCCCTTTGATGC+AGG | + | chr4_1:22899515-22899534 | Msa0540550:intron | 40.0% | |
| CGTGATTTCTCCCAAACATA+TGG | + | chr4_1:22899545-22899564 | Msa0540550:CDS | 40.0% | |
| CTGTATTACGGTCAAATCCA+AGG | + | chr4_1:22899627-22899646 | Msa0540550:intron | 40.0% | |
| ATTGCAAGCATAGAACTGCA+GGG | - | chr4_1:22899777-22899796 | None:intergenic | 40.0% | |
| AATTGCAAGCATAGAACTGC+AGG | - | chr4_1:22899778-22899797 | None:intergenic | 40.0% | |
| AAAAGGACCTTATCAACCAG+TGG | - | chr4_1:22899856-22899875 | None:intergenic | 40.0% | |
| AATACTGTTCTCATGCTCTC+AGG | + | chr4_1:22900618-22900637 | Msa0540550:intron | 40.0% | |
| ATACTGTTCTCATGCTCTCA+GGG | + | chr4_1:22900619-22900638 | Msa0540550:intron | 40.0% | |
| ! | TGATCTTTTGCGGAAGGAAA+TGG | + | chr4_1:22900716-22900735 | Msa0540550:CDS | 40.0% |
| ATGGTTTCCGACAGTGAATA+TGG | + | chr4_1:22900735-22900754 | Msa0540550:CDS | 40.0% | |
| TGGTTTCCGACAGTGAATAT+GGG | + | chr4_1:22900736-22900755 | Msa0540550:CDS | 40.0% | |
| GTTTCACCATCTCTTCTTCA+GGG | - | chr4_1:22901419-22901438 | None:intergenic | 40.0% | |
| CTGAAGAAGAGATGGTGAAA+CGG | + | chr4_1:22901418-22901437 | Msa0540550:CDS | 40.0% | |
| TGAAGAAGAGATGGTGAAAC+GGG | + | chr4_1:22901419-22901438 | Msa0540550:CDS | 40.0% | |
| ! | ATATGCTGCTCATTTTACGC+AGG | + | chr4_1:22901516-22901535 | Msa0540550:intron | 40.0% |
| ! | TATGCTGCTCATTTTACGCA+GGG | + | chr4_1:22901517-22901536 | Msa0540550:intron | 40.0% |
| CAAAAAGAGGGAGACTTCAT+AGG | + | chr4_1:22901623-22901642 | Msa0540550:CDS | 40.0% | |
| CAAAGCAACACACACCTTAA+AGG | - | chr4_1:22901777-22901796 | None:intergenic | 40.0% | |
| ! | AAGATAGCCTTTTGTGCGTT+TGG | + | chr4_1:22901842-22901861 | Msa0540550:intron | 40.0% |
| ATGTGATTAAGAGTGGTCAC+TGG | + | chr4_1:22901922-22901941 | Msa0540550:intron | 40.0% | |
| TTCTCGGTTTCAGTATGTGA+TGG | + | chr4_1:22902114-22902133 | Msa0540550:intron | 40.0% | |
| !! | CCTTACATTTTAGGTGCTCA+GGG | - | chr4_1:22902407-22902426 | None:intergenic | 40.0% |
| !! | TCCTTACATTTTAGGTGCTC+AGG | - | chr4_1:22902408-22902427 | None:intergenic | 40.0% |
| GCAATACTAATGAACAAGGC+CGG | - | chr4_1:22902438-22902457 | None:intergenic | 40.0% | |
| ! | CATGCCTTTATTTGCTTCTG+TGG | + | chr4_1:22902542-22902561 | Msa0540550:intron | 40.0% |
| ! | TGCCTTTATTTGCTTCTGTG+GGG | + | chr4_1:22902544-22902563 | Msa0540550:intron | 40.0% |
| TTCCCCACAGAAGCAAATAA+AGG | - | chr4_1:22902549-22902568 | None:intergenic | 40.0% | |
| TTGTATCACTCTGCAGCAAA+CGG | + | chr4_1:22902697-22902716 | Msa0540550:intron | 40.0% | |
| TGCATGAAAGCTGTGTGAAT+AGG | + | chr4_1:22902721-22902740 | Msa0540550:exon | 40.0% | |
| ! | TGGGTGAAGTATGGATTTTG+TGG | + | chr4_1:22902768-22902787 | Msa0540550:three_prime_UTR | 40.0% |
| ! | GGGTGAAGTATGGATTTTGT+GGG | + | chr4_1:22902769-22902788 | Msa0540550:three_prime_UTR | 40.0% |
| AGCTACAAGATCCAAATTCC+TGG | + | chr4_1:22902822-22902841 | Msa0540550:three_prime_UTR | 40.0% | |
| TTACCGTAAAACTCATCCAC+TGG | + | chr4_1:22902862-22902881 | Msa0540550:three_prime_UTR | 40.0% | |
| ! | TCTCCAGTGGATGAGTTTTA+CGG | - | chr4_1:22902868-22902887 | None:intergenic | 40.0% |
| CGCTAGAACCAACATATTGT+TGG | - | chr4_1:22903014-22903033 | None:intergenic | 40.0% | |
| !! | TTGGTTCTAGCGAAAGGATT+TGG | + | chr4_1:22903022-22903041 | Msa0540550:three_prime_UTR | 40.0% |
| TGGATCGCCTTTACACTTTC+AGG | + | chr4_1:22897885-22897904 | Msa0540550:CDS | 45.0% | |
| GGCTTATGAAAAGGACGGAA+GGG | - | chr4_1:22898244-22898263 | None:intergenic | 45.0% | |
| AGGCTTATGAAAAGGACGGA+AGG | - | chr4_1:22898245-22898264 | None:intergenic | 45.0% | |
| ! | TGTTATGTCTGGATTAGGGG+CGG | - | chr4_1:22898846-22898865 | None:intergenic | 45.0% |
| GTTCCCTTTGATGCAGGAAA+AGG | + | chr4_1:22899521-22899540 | Msa0540550:intron | 45.0% | |
| ! | CGTCCTTTTCCTGCATCAAA+GGG | - | chr4_1:22899527-22899546 | None:intergenic | 45.0% |
| ! | ACGTCCTTTTCCTGCATCAA+AGG | - | chr4_1:22899528-22899547 | None:intergenic | 45.0% |
| GTTTCATGCTGTACTCTACC+TGG | + | chr4_1:22899748-22899767 | Msa0540550:intron | 45.0% | |
| ! | AGATTTGGTAGGTACACCAC+TGG | + | chr4_1:22899837-22899856 | Msa0540550:intron | 45.0% |
| ! | AGGTACACCACTGGTTGATA+AGG | + | chr4_1:22899846-22899865 | Msa0540550:intron | 45.0% |
| !! | CTTTCACTTACTCTGGAGTC+TGG | - | chr4_1:22900069-22900088 | None:intergenic | 45.0% |
| GATGTGGTTGTTCTGTTAGG+TGG | + | chr4_1:22900173-22900192 | Msa0540550:intron | 45.0% | |
| GTTAGGTGGAAACTCTGTGT+TGG | + | chr4_1:22900187-22900206 | Msa0540550:intron | 45.0% | |
| TACTGTTCTCATGCTCTCAG+GGG | + | chr4_1:22900620-22900639 | Msa0540550:intron | 45.0% | |
| ! | TGTGTACCTTTTCCACTACC+AGG | - | chr4_1:22900648-22900667 | None:intergenic | 45.0% |
| GGATTTAAGCATCTGAGTGC+TGG | + | chr4_1:22900693-22900712 | Msa0540550:CDS | 45.0% | |
| !!! | TGAGTGCTGGTGATCTTTTG+CGG | + | chr4_1:22900706-22900725 | Msa0540550:CDS | 45.0% |
| TTTCCTCGGCGCATATTTGA+GGG | + | chr4_1:22900792-22900811 | Msa0540550:intron | 45.0% | |
| TCAAAACAGCGCGATGATTC+TGG | + | chr4_1:22900831-22900850 | Msa0540550:intron | 45.0% | |
| AGGAAGAATCGTTCCATCAG+CGG | + | chr4_1:22900867-22900886 | Msa0540550:CDS | 45.0% | |
| TGATGGTTTCCCTAGAAGTG+AGG | + | chr4_1:22900948-22900967 | Msa0540550:CDS | 45.0% | |
| TGATTGCCCTGAAGAAGAGA+TGG | + | chr4_1:22901410-22901429 | Msa0540550:CDS | 45.0% | |
| CGTTTCACCATCTCTTCTTC+AGG | - | chr4_1:22901420-22901439 | None:intergenic | 45.0% | |
| GATTAAGAGTGGTCACTGGT+TGG | + | chr4_1:22901926-22901945 | Msa0540550:intron | 45.0% | |
| TGACACCCGTTTGAATCAGA+TGG | + | chr4_1:22902068-22902087 | Msa0540550:intron | 45.0% | |
| CCCTGAGCACCTAAAATGTA+AGG | + | chr4_1:22902404-22902423 | Msa0540550:intron | 45.0% | |
| TTGCTTCTGTGGGGAAGAAA+AGG | + | chr4_1:22902553-22902572 | Msa0540550:intron | 45.0% | |
| ACACAAAGAGATGGAAGCCA+AGG | - | chr4_1:22902639-22902658 | None:intergenic | 45.0% | |
| GAGCAAATCAGCCAGGAATT+TGG | - | chr4_1:22902836-22902855 | None:intergenic | 45.0% | |
| !! | AATTCCTGGCTGATTTGCTC+TGG | + | chr4_1:22902836-22902855 | Msa0540550:three_prime_UTR | 45.0% |
| ATTTCCAGAGCAAATCAGCC+AGG | - | chr4_1:22902843-22902862 | None:intergenic | 45.0% | |
| !! | GAAATATTAAAATATTAAAT+TGG | + | chr4_1:22899370-22899389 | Msa0540550:intron | 5.0% |
| !!! | AATTAATTTTTTTATAATGA+GGG | + | chr4_1:22902362-22902381 | Msa0540550:intron | 5.0% |
| TAAAACGAGCTAGGCCGAGT+CGG | + | chr4_1:22898770-22898789 | Msa0540550:intron | 50.0% | |
| ! | GTTATGTCTGGATTAGGGGC+GGG | - | chr4_1:22898845-22898864 | None:intergenic | 50.0% |
| ! | GGCTATTGGGATGGATTTCG+AGG | - | chr4_1:22898996-22899015 | None:intergenic | 50.0% |
| ! | CATAGAACTGCAGGGTATCC+AGG | - | chr4_1:22899769-22899788 | None:intergenic | 50.0% |
| GACACAGTCACTGTCTAGAG+AGG | + | chr4_1:22900126-22900145 | Msa0540550:intron | 50.0% | |
| ACTGTTCTCATGCTCTCAGG+GGG | + | chr4_1:22900621-22900640 | Msa0540550:intron | 50.0% | |
| ! | TGCTGGTGATCTTTTGCGGA+AGG | + | chr4_1:22900710-22900729 | Msa0540550:CDS | 50.0% |
| GTTTCCTCGGCGCATATTTG+AGG | + | chr4_1:22900791-22900810 | Msa0540550:intron | 50.0% | |
| AAACCCTCAAATATGCGCCG+AGG | - | chr4_1:22900798-22900817 | None:intergenic | 50.0% | |
| AATCTGACAGTCACCGCTGA+TGG | - | chr4_1:22900883-22900902 | None:intergenic | 50.0% | |
| TGCGGTTCTCCTCACTTCTA+GGG | - | chr4_1:22900960-22900979 | None:intergenic | 50.0% | |
| ATGCGGTTCTCCTCACTTCT+AGG | - | chr4_1:22900961-22900980 | None:intergenic | 50.0% | |
| ATCTCCGCAGATCAATGCTG+TGG | + | chr4_1:22902222-22902241 | Msa0540550:intron | 50.0% | |
| TCTCCGCAGATCAATGCTGT+GGG | + | chr4_1:22902223-22902242 | Msa0540550:intron | 50.0% | |
| !! | GTTCCCACAGCATTGATCTG+CGG | - | chr4_1:22902229-22902248 | None:intergenic | 50.0% |
| GATCAATGCTGTGGGAACAG+AGG | + | chr4_1:22902231-22902250 | Msa0540550:intron | 50.0% | |
| ! | GCAAGTTCGGCCAGTTTTTG+CGG | + | chr4_1:22902267-22902286 | Msa0540550:CDS | 50.0% |
| ACCTCACATGCCGCAAAAAC+TGG | - | chr4_1:22902280-22902299 | None:intergenic | 50.0% | |
| CAAAGAGATGGAAGCCAAGG+TGG | - | chr4_1:22902636-22902655 | None:intergenic | 50.0% | |
| GTCGAATCGTAACCCTTGAC+AGG | + | chr4_1:22902931-22902950 | Msa0540550:three_prime_UTR | 50.0% | |
| AAAACGAGCTAGGCCGAGTC+GGG | + | chr4_1:22898771-22898790 | Msa0540550:intron | 55.0% | |
| GGCCTACTTAAAGCCCGACT+CGG | - | chr4_1:22898787-22898806 | None:intergenic | 55.0% | |
| !! | GAGTCGGGCTTTAAGTAGGC+CGG | + | chr4_1:22898786-22898805 | Msa0540550:intron | 55.0% |
| !! | AGTCGGGCTTTAAGTAGGCC+GGG | + | chr4_1:22898787-22898806 | Msa0540550:intron | 55.0% |
| CTTTAAGTAGGCCGGGCCAT+AGG | + | chr4_1:22898794-22898813 | Msa0540550:intron | 55.0% | |
| ! | TCTGGATTAGGGGCGGGAAT+AGG | - | chr4_1:22898839-22898858 | None:intergenic | 55.0% |
| ATGCTGGAGCTGAGCCATCT+AGG | + | chr4_1:22900010-22900029 | Msa0540550:intron | 55.0% | |
| AGTCACTGTCTAGAGAGGCC+TGG | + | chr4_1:22900131-22900150 | Msa0540550:intron | 55.0% | |
| CTGTTCTCATGCTCTCAGGG+GGG | + | chr4_1:22900622-22900641 | Msa0540550:intron | 55.0% | |
| ! | GCCAGTTTTTGCGGCATGTG+AGG | + | chr4_1:22902276-22902295 | Msa0540550:CDS | 55.0% |
| !! | GGCCGAGTCGGGCTTTAAGT+AGG | + | chr4_1:22898782-22898801 | Msa0540550:intron | 60.0% |
| ATTAGGGGCGGGAATAGGCC+AGG | - | chr4_1:22898834-22898853 | None:intergenic | 60.0% | |
| !! | ACGGGTGCTGAGCCGTAATC+AGG | + | chr4_1:22901437-22901456 | Msa0540550:CDS | 60.0% |
| !! | GGGGGGCCTGGTAGTGGAAA+AGG | + | chr4_1:22900639-22900658 | Msa0540550:intron | 65.0% |
| GCCGGGCCATAGGCCCTTGA+CGG | + | chr4_1:22898804-22898823 | Msa0540550:intron | 70.0% | |
| CCCGTCAAGGGCCTATGGCC+CGG | - | chr4_1:22898808-22898827 | None:intergenic | 70.0% | |
| CCGGGCCATAGGCCCTTGAC+GGG | + | chr4_1:22898805-22898824 | Msa0540550:intron | 70.0% | |
| GGCCATAGGCCCTTGACGGG+CGG | + | chr4_1:22898808-22898827 | Msa0540550:intron | 70.0% | |
| TAGGCCAGGCCGCCCGTCAA+GGG | - | chr4_1:22898820-22898839 | None:intergenic | 70.0% | |
| ATAGGCCAGGCCGCCCGTCA+AGG | - | chr4_1:22898821-22898840 | None:intergenic | 70.0% | |
| CTCATGCTCTCAGGGGGGCC+TGG | + | chr4_1:22900627-22900646 | Msa0540550:intron | 70.0% | |
| CTCTCAGGGGGGCCTGGTAG+TGG | + | chr4_1:22900633-22900652 | Msa0540550:intron | 70.0% | |
| GGCCGCCCGTCAAGGGCCTA+TGG | - | chr4_1:22898813-22898832 | None:intergenic | 75.0% | |
| ! | TAGGCCCTTGACGGGCGGCC+TGG | + | chr4_1:22898813-22898832 | Msa0540550:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 22897665 | 22903136 | 22897665 | ID=Msa0540550;Name=Msa0540550 |
| chr4_1 | mRNA | 22897665 | 22903136 | 22897665 | ID=Msa0540550-mRNA-1;Parent=Msa0540550;Name=Msa0540550-mRNA-1;_AED=0.08;_eAED=0.08;_QI=30|1|1|1|1|1|9|409|242 |
| chr4_1 | exon | 22897665 | 22897754 | 22897665 | ID=Msa0540550-mRNA-1:exon:6351;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22897838 | 22897906 | 22897838 | ID=Msa0540550-mRNA-1:exon:6352;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22899537 | 22899591 | 22899537 | ID=Msa0540550-mRNA-1:exon:6353;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22900640 | 22900757 | 22900640 | ID=Msa0540550-mRNA-1:exon:6354;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22900840 | 22900996 | 22900840 | ID=Msa0540550-mRNA-1:exon:6355;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22901378 | 22901458 | 22901378 | ID=Msa0540550-mRNA-1:exon:6356;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22901538 | 22901645 | 22901538 | ID=Msa0540550-mRNA-1:exon:6357;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22902232 | 22902297 | 22902232 | ID=Msa0540550-mRNA-1:exon:6358;Parent=Msa0540550-mRNA-1 |
| chr4_1 | exon | 22902713 | 22903136 | 22902713 | ID=Msa0540550-mRNA-1:exon:6359;Parent=Msa0540550-mRNA-1 |
| chr4_1 | five_prime_UTR | 22897665 | 22897694 | 22897665 | ID=Msa0540550-mRNA-1:five_prime_utr;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22897695 | 22897754 | 22897695 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22897838 | 22897906 | 22897838 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22899537 | 22899591 | 22899537 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22900640 | 22900757 | 22900640 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22900840 | 22900996 | 22900840 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22901378 | 22901458 | 22901378 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22901538 | 22901645 | 22901538 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22902232 | 22902297 | 22902232 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | CDS | 22902713 | 22902727 | 22902713 | ID=Msa0540550-mRNA-1:cds;Parent=Msa0540550-mRNA-1 |
| chr4_1 | three_prime_UTR | 22902728 | 22903136 | 22902728 | ID=Msa0540550-mRNA-1:three_prime_utr;Parent=Msa0540550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
