AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0296920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0296920 MtrunA17_Chr2g0319951 100.000 218 0 0 1 218 1 218 1.90e-162 447
Msa0296920 MtrunA17_Chr2g0315551 83.871 217 34 1 1 217 1 216 1.73e-135 379
Msa0296920 MtrunA17_Chr4g0046261 76.712 219 46 3 1 217 1 216 7.65e-122 344
Msa0296920 MtrunA17_Chr2g0283131 76.256 219 47 3 1 217 1 216 2.17e-121 343
Msa0296920 MtrunA17_Chr4g0040781 73.973 219 52 3 1 217 1 216 3.47e-120 340
Msa0296920 MtrunA17_Chr2g0325091 73.585 212 52 3 7 217 5 213 1.67e-112 320
Msa0296920 MtrunA17_Chr3g0112681 68.981 216 66 1 3 218 2 216 9.98e-111 316
Msa0296920 MtrunA17_Chr4g0032201 70.093 214 62 2 4 217 3 214 6.14e-110 314
Msa0296920 MtrunA17_Chr2g0276941 66.038 212 72 0 7 218 9 220 3.57e-102 295
Msa0296920 MtrunA17_Chr1g0174281 60.748 214 80 1 7 216 9 222 1.91e-95 278
Msa0296920 MtrunA17_Chr8g0381841 60.280 214 82 2 6 216 10 223 5.37e-92 269
Msa0296920 MtrunA17_Chr3g0123821 59.174 218 86 3 2 216 4 221 2.32e-91 267
Msa0296920 MtrunA17_Chr7g0231131 61.353 207 79 1 11 216 13 219 5.44e-91 266
Msa0296920 MtrunA17_Chr6g0482721 55.924 211 92 1 7 217 6 215 5.07e-84 248
Msa0296920 MtrunA17_Chr8g0346421 55.000 220 88 3 4 217 17 231 1.85e-83 248
Msa0296920 MtrunA17_Chr7g0214241 58.454 207 85 1 12 217 14 220 2.34e-83 247
Msa0296920 MtrunA17_Chr8g0351861 53.744 227 95 3 1 217 1 227 5.64e-82 243
Msa0296920 MtrunA17_Chr1g0189361 55.189 212 90 2 11 217 12 223 9.55e-81 240
Msa0296920 MtrunA17_Chr7g0275991 58.696 184 76 0 5 188 12 195 1.71e-78 234
Msa0296920 MtrunA17_Chr8g0392931 54.502 211 96 0 7 217 8 218 5.76e-77 230
Msa0296920 MtrunA17_Chr7g0234201 55.556 207 88 2 12 217 12 215 4.44e-76 228
Msa0296920 MtrunA17_Chr2g0290891 48.387 217 95 3 10 217 3 211 1.28e-64 199
Msa0296920 MtrunA17_Chr6g0458081 55.689 167 74 0 10 176 3 169 3.90e-64 197
Msa0296920 MtrunA17_Chr4g0055651 46.411 209 101 2 9 217 4 201 4.30e-59 184
Msa0296920 MtrunA17_Chr8g0349711 44.651 215 103 4 12 217 5 212 5.64e-58 182
Msa0296920 MtrunA17_Chr8g0335471 46.479 213 98 3 9 218 4 203 2.63e-57 180
Msa0296920 MtrunA17_Chr7g0250531 46.479 213 97 3 9 218 4 202 7.81e-57 179
Msa0296920 MtrunA17_Chr8g0349681 46.667 210 104 3 10 217 381 584 2.12e-55 185
Msa0296920 MtrunA17_Chr8g0349681 47.904 167 87 0 10 176 172 338 1.06e-49 170
Msa0296920 MtrunA17_Chr8g0349681 51.282 156 76 0 12 167 12 167 5.44e-49 168
Msa0296920 MtrunA17_Chr1g0182321 49.123 171 86 1 5 174 7 177 1.01e-53 171
Msa0296920 MtrunA17_Chr4g0030911 42.991 214 105 5 9 216 11 213 2.13e-53 170
Msa0296920 MtrunA17_Chr1g0212521 42.584 209 114 3 9 216 11 214 2.42e-53 170
Msa0296920 MtrunA17_Chr1g0182301 48.538 171 87 1 5 174 7 177 3.20e-53 170
Msa0296920 MtrunA17_Chr7g0263071 49.102 167 84 1 9 174 11 177 1.98e-52 168
Msa0296920 MtrunA17_Chr2g0276931 44.330 194 106 1 8 201 4 195 4.99e-52 166
Msa0296920 MtrunA17_Chr1g0199331 46.012 163 87 1 15 176 33 195 5.67e-50 161
Msa0296920 MtrunA17_Chr3g0109721 45.679 162 88 0 15 176 12 173 1.23e-48 158
Msa0296920 MtrunA17_Chr2g0327911 45.087 173 93 2 4 174 6 178 1.25e-48 158
Msa0296920 MtrunA17_Chr8g0384311 47.619 168 85 3 9 174 9 175 2.90e-48 157
Msa0296920 MtrunA17_Chr5g0433561 44.444 162 90 0 15 176 12 173 6.88e-47 153
Msa0296920 MtrunA17_Chr1g0159481 48.214 168 84 3 9 174 13 179 2.11e-46 152
Msa0296920 MtrunA17_Chr7g0265001 44.286 210 107 4 10 217 13 214 4.10e-46 152
Msa0296920 MtrunA17_Chr3g0130271 48.824 170 81 5 9 174 8 175 1.62e-45 150
Msa0296920 MtrunA17_Chr8g0390561 40.625 160 95 0 15 174 11 170 1.23e-43 145
Msa0296920 MtrunA17_Chr1g0197331 40.090 222 106 5 6 217 8 212 8.64e-43 143
Msa0296920 MtrunA17_Chr1g0180291 43.062 209 108 6 10 216 11 210 1.02e-42 143
Msa0296920 MtrunA17_Chr5g0400131 36.943 157 99 0 14 170 10 166 7.29e-40 135
Msa0296920 MtrunA17_Chr4g0055081 36.306 157 100 0 14 170 10 166 4.29e-39 134
Msa0296920 MtrunA17_Chr3g0123971 34.783 161 105 0 14 174 10 170 1.47e-38 132
Msa0296920 MtrunA17_Chr8g0382221 34.783 161 105 0 14 174 10 170 1.85e-38 132
Msa0296920 MtrunA17_Chr8g0383261 40.123 162 90 3 13 167 12 173 2.93e-34 121
Msa0296920 MtrunA17_Chr4g0034871 35.714 182 102 4 13 187 8 181 5.92e-34 120
Msa0296920 MtrunA17_Chr6g0466301 36.970 165 97 2 13 170 8 172 9.39e-34 120
Msa0296920 MtrunA17_Chr6g0465491 36.970 165 97 2 13 170 8 172 9.39e-34 120
Msa0296920 MtrunA17_Chr2g0331691 38.889 162 92 3 13 167 10 171 3.06e-33 119
Msa0296920 MtrunA17_Chr1g0201121 37.037 162 95 2 13 167 8 169 6.43e-33 117
Msa0296920 MtrunA17_Chr4g0004661 38.272 162 93 3 13 167 64 225 8.06e-32 116
Msa0296920 MtrunA17_Chr3g0138121 33.117 154 100 2 14 167 14 164 4.94e-24 95.1
Msa0296920 MtrunA17_Chr3g0138111 33.117 154 100 2 14 167 14 164 6.04e-24 95.1
Msa0296920 MtrunA17_Chr3g0138101 33.117 154 100 2 14 167 14 164 6.23e-24 95.1
Msa0296920 MtrunA17_Chr3g0117931 30.387 181 112 5 13 181 8 186 4.84e-22 89.7
Msa0296920 MtrunA17_Chr6g0466161 36.054 147 87 3 28 167 5 151 4.89e-22 89.7
Msa0296920 MtrunA17_Chr6g0465471 36.054 147 87 3 28 167 5 151 5.37e-22 89.7
Msa0296920 MtrunA17_Chr4g0037021 31.492 181 110 5 13 181 6 184 6.72e-22 89.0
Msa0296920 MtrunA17_Chr2g0325101 32.934 167 98 5 13 167 6 170 1.22e-21 88.2
Msa0296920 MtrunA17_Chr4g0046211 37.500 120 72 3 13 131 6 123 1.80e-21 86.7
Msa0296920 MtrunA17_Chr5g0405791 31.138 167 101 5 13 167 6 170 2.18e-20 85.1
Msa0296920 MtrunA17_Chr6g0486041 36.364 121 74 3 13 132 6 124 5.28e-20 84.3
Msa0296920 MtrunA17_Chr8g0371501 31.138 167 101 5 13 167 6 170 6.47e-20 84.0
Msa0296920 MtrunA17_Chr6g0466431 34.343 99 56 1 13 111 8 97 2.39e-16 71.6
Msa0296920 MtrunA17_Chr6g0465611 34.343 99 56 1 13 111 8 97 2.39e-16 71.6
Msa0296920 MtrunA17_Chr1g0178291 33.333 165 100 5 10 174 428 582 2.71e-15 73.9
Msa0296920 MtrunA17_Chr5g0443631 27.717 184 118 6 3 177 95 272 2.69e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0296920 AT1G06400.1 83.486 218 34 1 1 218 1 216 2.16e-136 381
Msa0296920 AT1G16920.1 82.569 218 36 2 1 218 1 216 3.61e-133 373
Msa0296920 AT4G18800.1 82.569 218 34 2 1 218 1 214 1.50e-131 369
Msa0296920 AT5G45750.1 81.651 218 38 1 1 218 1 216 3.95e-131 368
Msa0296920 AT5G60860.1 77.273 220 45 3 1 218 1 217 7.37e-125 352
Msa0296920 AT3G15060.1 75.455 220 49 3 1 218 1 217 8.39e-122 344
Msa0296920 AT4G18430.1 73.059 219 54 3 1 217 1 216 3.33e-119 338
Msa0296920 AT1G28550.1 72.146 219 57 3 1 217 1 217 4.94e-117 332
Msa0296920 AT2G33870.1 71.233 219 59 3 1 217 1 217 1.07e-114 327
Msa0296920 AT1G07410.1 70.423 213 60 2 5 217 4 213 2.45e-109 313
Msa0296920 AT1G09630.1 68.224 214 67 1 5 218 4 216 1.80e-107 308
Msa0296920 AT3G46830.1 68.056 216 67 2 4 218 3 217 6.43e-104 299
Msa0296920 AT3G46830.2 68.056 216 67 2 4 218 3 217 6.43e-104 299
Msa0296920 AT5G59150.1 66.977 215 69 2 4 217 3 216 5.20e-103 297
Msa0296920 AT5G47960.1 64.319 213 72 2 7 216 9 220 6.55e-96 279
Msa0296920 AT3G12160.1 63.158 209 72 2 11 216 13 219 1.24e-94 276
Msa0296920 AT4G39990.1 59.447 217 71 3 11 218 15 223 3.55e-90 265
Msa0296920 AT5G65270.1 58.447 219 73 3 11 218 15 226 1.50e-88 260
Msa0296920 AT2G43130.1 57.746 213 85 2 7 217 4 213 9.28e-84 248
Msa0296920 AT5G47520.1 55.022 229 84 3 1 218 1 221 9.51e-84 248
Msa0296920 AT1G05810.1 55.963 218 88 3 6 218 3 217 1.67e-81 242
Msa0296920 AT1G05810.2 55.963 218 88 3 6 218 49 263 4.72e-81 243
Msa0296920 AT2G31680.1 55.046 218 91 4 6 218 3 218 3.52e-80 239
Msa0296920 AT1G18200.1 56.604 212 85 2 1 205 1 212 7.41e-79 236
Msa0296920 AT1G73640.1 52.838 229 97 2 1 218 1 229 5.23e-78 234
Msa0296920 AT3G07410.1 54.419 215 98 0 3 217 2 216 5.65e-78 233
Msa0296920 AT1G01200.1 54.717 212 85 4 8 208 23 234 2.13e-74 225
Msa0296920 AT5G59150.2 62.805 164 59 2 55 217 3 165 1.11e-69 211
Msa0296920 AT4G35860.1 48.095 210 106 2 10 217 3 211 1.94e-65 201
Msa0296920 AT4G17170.1 48.611 216 94 3 10 216 3 210 2.81e-65 201
Msa0296920 AT4G17160.1 50.481 208 96 3 10 216 3 204 8.65e-64 197
Msa0296920 AT1G02130.1 47.642 212 95 3 9 217 4 202 1.18e-60 189
Msa0296920 AT5G47200.1 45.755 212 104 2 7 218 2 202 6.23e-58 182
Msa0296920 AT4G17530.1 45.755 212 104 2 7 218 2 202 9.02e-58 181
Msa0296920 AT3G11730.1 43.541 209 110 2 8 216 3 203 1.36e-54 173
Msa0296920 AT3G09900.1 43.119 218 119 2 1 217 3 216 8.16e-54 172
Msa0296920 AT5G03520.1 43.119 218 117 2 1 217 3 214 8.20e-54 172
Msa0296920 AT3G46060.2 42.105 209 115 3 9 216 11 214 1.83e-52 168
Msa0296920 AT3G46060.3 42.105 209 115 3 9 216 11 214 1.83e-52 168
Msa0296920 AT3G46060.1 42.105 209 115 3 9 216 11 214 1.83e-52 168
Msa0296920 AT5G59840.1 41.148 209 117 2 9 216 11 214 3.75e-52 167
Msa0296920 AT3G54840.1 46.471 170 90 1 8 176 28 197 4.93e-52 167
Msa0296920 AT4G19640.1 47.239 163 86 0 15 177 12 174 9.71e-52 166
Msa0296920 AT3G54840.3 47.531 162 84 1 16 176 2 163 1.49e-51 164
Msa0296920 AT3G53610.2 40.670 209 118 2 9 216 11 214 4.65e-51 165
Msa0296920 AT3G53610.3 40.670 209 118 2 9 216 11 214 4.65e-51 165
Msa0296920 AT3G53610.1 40.670 209 118 2 9 216 11 214 4.65e-51 165
Msa0296920 AT5G45130.1 46.012 163 88 0 15 177 12 174 6.86e-51 164
Msa0296920 AT3G54840.2 47.826 161 83 1 8 167 28 188 8.85e-51 163
Msa0296920 AT1G43890.3 47.644 191 96 4 1 189 1 189 1.76e-49 160
Msa0296920 AT1G43890.1 47.644 191 96 4 1 189 1 189 1.76e-49 160
Msa0296920 AT1G43890.2 47.644 191 96 4 1 189 1 189 1.76e-49 160
Msa0296920 AT5G45130.2 45.342 161 88 0 17 177 22 182 4.62e-49 159
Msa0296920 AT4G35860.2 46.386 166 82 2 55 216 2 164 5.18e-47 153
Msa0296920 AT5G03530.2 42.922 219 114 6 1 217 1 210 8.97e-45 149
Msa0296920 AT5G03530.1 42.922 219 114 6 1 217 1 210 8.97e-45 149
Msa0296920 AT4G19640.3 48.855 131 67 0 15 145 12 142 2.89e-40 136
Msa0296920 AT4G19640.2 50.862 116 57 0 15 130 12 127 3.03e-39 132
Msa0296920 AT2G22290.1 35.669 157 101 0 14 170 10 166 1.81e-38 132
Msa0296920 AT4G39890.1 36.076 158 100 1 14 170 10 167 4.18e-38 132
Msa0296920 AT5G10260.1 35.032 157 102 0 14 170 10 166 7.92e-38 130
Msa0296920 AT2G44610.1 35.669 157 101 0 14 170 10 166 2.55e-37 129
Msa0296920 AT5G03520.2 39.181 171 97 2 48 217 40 204 3.02e-37 129
Msa0296920 AT5G64990.1 34.783 161 105 0 14 174 8 168 2.72e-36 127
Msa0296920 AT3G09910.3 44.186 172 93 3 10 179 10 180 7.19e-36 125
Msa0296920 AT3G09910.1 44.186 172 93 3 10 179 10 180 7.19e-36 125
Msa0296920 AT3G09910.2 44.186 172 93 3 10 179 10 180 7.19e-36 125
Msa0296920 AT2G21880.1 38.182 165 95 2 13 170 9 173 4.16e-35 124
Msa0296920 AT3G18820.1 37.363 182 99 4 13 187 8 181 6.34e-35 123
Msa0296920 AT3G09910.5 43.787 169 92 3 10 176 10 177 6.51e-35 123
Msa0296920 AT3G09910.4 43.787 169 92 3 10 176 10 177 6.51e-35 123
Msa0296920 AT1G22740.1 38.272 162 93 2 13 167 8 169 7.42e-35 123
Msa0296920 AT5G46025.1 55.660 106 46 1 75 179 6 111 2.12e-34 119
Msa0296920 AT1G52280.1 35.673 171 103 2 13 176 8 178 4.38e-34 121
Msa0296920 AT5G64990.2 33.333 168 105 1 14 174 8 175 1.51e-33 120
Msa0296920 AT3G16100.1 37.037 162 95 2 13 167 8 169 4.55e-33 118
Msa0296920 AT4G09720.1 36.364 165 98 2 13 170 8 172 1.05e-32 117
Msa0296920 AT1G49300.2 35.165 182 103 3 13 187 8 181 3.48e-32 116
Msa0296920 AT1G49300.1 35.165 182 103 3 13 187 8 181 3.48e-32 116
Msa0296920 AT4G09720.4 35.882 170 97 3 13 170 8 177 2.19e-31 114
Msa0296920 AT4G09720.3 34.659 176 97 3 13 170 8 183 2.64e-30 112
Msa0296920 AT5G39620.1 38.182 165 93 3 14 170 6 169 3.87e-30 110
Msa0296920 AT5G55080.1 34.545 165 97 3 14 174 14 171 1.13e-26 102
Msa0296920 AT2G21880.4 35.811 148 88 2 30 170 1 148 2.24e-26 100
Msa0296920 AT2G21880.3 35.811 148 88 2 30 170 1 148 2.24e-26 100
Msa0296920 AT2G21880.2 33.333 165 95 3 13 170 9 165 2.95e-25 98.2
Msa0296920 AT2G44690.1 34.444 180 104 5 13 180 18 195 5.51e-25 97.8
Msa0296920 AT5G20020.1 33.117 154 100 2 14 167 14 164 7.04e-24 95.1
Msa0296920 AT5G20010.1 33.117 154 100 2 14 167 14 164 9.16e-24 94.7
Msa0296920 AT5G55190.1 33.117 154 100 2 14 167 14 164 9.46e-24 94.7
Msa0296920 AT4G09720.6 35.507 138 82 2 40 170 1 138 4.83e-22 89.0
Msa0296920 AT4G09720.5 35.507 138 82 2 40 170 1 138 4.83e-22 89.0
Msa0296920 AT4G09720.2 35.507 138 82 2 40 170 1 138 4.83e-22 89.0
Msa0296920 AT4G35020.1 35.088 171 89 6 13 167 6 170 9.28e-22 89.0
Msa0296920 AT4G35020.2 35.088 171 89 6 13 167 6 170 9.28e-22 89.0
Msa0296920 AT4G35020.3 35.088 171 89 6 13 167 6 170 9.28e-22 89.0
Msa0296920 AT1G75840.1 33.533 167 97 6 13 167 6 170 2.08e-21 88.2
Msa0296920 AT1G20090.1 33.533 167 97 6 13 167 5 169 3.87e-21 87.4
Msa0296920 AT4G08190.1 63.636 66 21 1 102 167 65 127 8.59e-21 84.7
Msa0296920 AT3G48040.1 30.601 183 109 6 13 183 8 184 2.46e-20 85.5
Msa0296920 AT4G28950.1 28.571 182 118 5 13 184 6 185 2.67e-20 85.5
Msa0296920 AT5G62880.1 30.114 176 109 5 13 176 8 181 5.14e-20 84.7
Msa0296920 AT3G51300.1 31.515 165 99 5 15 167 8 170 1.01e-19 83.6
Msa0296920 AT5G45970.1 37.500 120 72 3 13 131 6 123 1.92e-19 83.2
Msa0296920 AT2G17800.2 31.737 167 100 6 13 167 6 170 2.74e-19 82.4
Msa0296920 AT2G17800.1 31.737 167 100 6 13 167 6 170 2.74e-19 82.4
Msa0296920 AT4G35950.1 31.737 167 100 6 13 167 6 170 3.37e-19 82.4
Msa0296920 AT3G48040.2 35.000 120 75 3 13 131 8 125 1.48e-18 80.1
Msa0296920 AT4G35020.4 37.719 114 68 3 15 127 8 119 2.25e-18 79.0
Msa0296920 AT4G35020.5 37.719 114 68 3 15 127 8 119 2.25e-18 79.0
Msa0296920 AT5G62880.2 33.094 139 83 4 13 150 8 137 3.54e-18 79.3
Msa0296920 AT3G51290.2 30.159 126 75 4 54 167 647 771 1.61e-11 63.5
Msa0296920 AT5G09910.1 26.056 142 80 3 14 130 23 164 8.33e-11 60.8
Msa0296920 AT5G09910.4 26.056 142 80 3 14 130 23 164 8.33e-11 60.8

Find 87 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTGACCTGTATGAATT+TGG 0.094207 2_3:-50494172 None:intergenic
ATAAGCATGACCACAATATT+AGG 0.173279 2_3:-50493678 None:intergenic
AATATTGTGGTCATGCTTAT+TGG 0.176164 2_3:+50493681 Msa0296920:CDS
CACTAGAAACGAGTTCAATT+TGG 0.247348 2_3:+50488351 Msa0296920:CDS
GTAGAGTTTGTTTCAACTAT+TGG 0.250340 2_3:-50488209 None:intergenic
GCTAGTCTTACATATGGTTT+TGG 0.283944 2_3:+50494068 Msa0296920:three_prime_UTR
CTAGTTCTAATCGGCGATTC+AGG 0.284120 2_3:+50488298 Msa0296920:CDS
GTTATTTGCTGCACCATTAC+TGG 0.287223 2_3:-50494225 None:intergenic
AAAGTTGTACTTAAACAAAT+AGG 0.313858 2_3:+50494144 Msa0296920:three_prime_UTR
AATCCAGGTTGCTCCATTTC+CGG 0.320810 2_3:+50488084 Msa0296920:five_prime_UTR
AGGAGGGAATTTCGGTGAAT+TGG 0.329562 2_3:-50488154 None:intergenic
ATTGTTTAGTCGAGGCTTAC+AGG 0.334133 2_3:+50488019 None:intergenic
TTGGAATCTAAATCCACTAT+TGG 0.346232 2_3:+50488370 Msa0296920:CDS
CATCTCAAACCTGATTATCT+TGG 0.347657 2_3:+50494340 Msa0296920:three_prime_UTR
ATGTAACAAAACTAAACATA+TGG 0.353981 2_3:-50494286 None:intergenic
CGAGGCTTACAGGTCGAAAA+AGG 0.355566 2_3:+50488029 Msa0296920:five_prime_UTR
TGTTGATGCTAAAGTCATTA+AGG 0.361634 2_3:+50488420 Msa0296920:CDS
ATAACTTAACCAAGATAATC+AGG 0.362783 2_3:-50494349 None:intergenic
AGTCATTAAGGCTCAGATTT+GGG 0.364724 2_3:+50488432 Msa0296920:CDS
ATGTTTAAAGCATCATTTGC+AGG 0.365719 2_3:+50494094 Msa0296920:three_prime_UTR
GAATTTCGGTGAATTGGAAT+TGG 0.366954 2_3:-50488148 None:intergenic
TAGAATGAAGGAGGGAATTT+CGG 0.377107 2_3:-50488162 None:intergenic
AACTTGACCTGTATGAATTT+GGG 0.380874 2_3:-50494171 None:intergenic
CTTCATGGAGACTTCTGCTT+TGG 0.384252 2_3:+50493782 Msa0296920:CDS
AAGAAGAAAATGCGTTGTTC+CGG 0.389901 2_3:-50488103 None:intergenic
AAGTCATTAAGGCTCAGATT+TGG 0.391753 2_3:+50488431 Msa0296920:CDS
AAAATGCGTTGTTCCGGAAA+TGG 0.401169 2_3:-50488097 None:intergenic
GAGGGAGTCTCTCTACTTCA+TGG 0.418666 2_3:+50493767 Msa0296920:CDS
AAACGTGAAAGAGGATTCTT+CGG 0.420021 2_3:+50493932 Msa0296920:CDS
CATAAGGCTAGTCTTACATA+TGG 0.431448 2_3:+50494062 Msa0296920:three_prime_UTR
AGCGAATTCAACACCAATAG+TGG 0.433002 2_3:-50488383 None:intergenic
TGTTCTTCTTCAACCATGGC+TGG 0.439946 2_3:+50488238 Msa0296920:exon
AAGACTTTCCATCTTCTGTT+GGG 0.447210 2_3:-50493737 None:intergenic
AAAGACTTTCCATCTTCTGT+TGG 0.448264 2_3:-50493738 None:intergenic
TAAGCATGACCACAATATTA+GGG 0.453467 2_3:-50493677 None:intergenic
GATTTGGGATACTGCTGGTC+AGG 0.455851 2_3:+50488447 Msa0296920:CDS
GTTCTCAAATGTGGCACGCC+TGG 0.475604 2_3:-50493616 None:intergenic
GAATTTCAACTTGTAGCATA+AGG 0.479529 2_3:+50494046 Msa0296920:three_prime_UTR
CACTTGTTCTTCTTCAACCA+TGG 0.481232 2_3:+50488234 Msa0296920:exon
CAATAACTAGAGGATGTATA+TGG 0.484795 2_3:-50494317 None:intergenic
GGTGCTTCATGTATGTCAGT+TGG 0.486853 2_3:+50493986 Msa0296920:exon
ATTTGGATGCTGCTCGAACT+AGG 0.492151 2_3:+50493965 Msa0296920:CDS
CGATTAGAACTAGTTTGAAA+AGG 0.492988 2_3:-50488288 None:intergenic
CTAATCGGCGATTCAGGTGT+TGG 0.497795 2_3:+50488304 Msa0296920:CDS
AGCATCAACAGTCAAACTCT+TGG 0.503401 2_3:-50488407 None:intergenic
TACACGATTCCGCACAATCC+AGG 0.509461 2_3:+50488069 Msa0296920:five_prime_UTR
AGCAAGAAAGCAGTTGAAGC+GGG 0.518997 2_3:+50493864 Msa0296920:CDS
CCACATTTGAGAACGCTGCC+AGG 0.522619 2_3:+50493625 Msa0296920:CDS
CATCTTGTAAATGTCTGCAC+TGG 0.524710 2_3:+50494024 Msa0296920:three_prime_UTR
TGTAACAAAACTAAACATAT+GGG 0.528434 2_3:-50494285 None:intergenic
GTTGCTGTCCCAACAGAAGA+TGG 0.535125 2_3:+50493729 Msa0296920:CDS
TTGATGTAACGGTAGAATGA+AGG 0.540826 2_3:-50488174 None:intergenic
GTCTGCTCTGTATCCAGCCA+TGG 0.542247 2_3:-50488251 None:intergenic
GCAGTTGAAGCGGGTGAAGG+TGG 0.542492 2_3:+50493873 Msa0296920:CDS
AGTGAATCTAGAAAGCAAGT+TGG 0.548595 2_3:-50488332 None:intergenic
ATGTAACGGTAGAATGAAGG+AGG 0.551793 2_3:-50488171 None:intergenic
ACAGACAATAAACGTGAAAG+AGG 0.555146 2_3:+50493923 Msa0296920:CDS
GTTCCGGAAATGGAGCAACC+TGG 0.556577 2_3:-50488087 None:intergenic
AGGACTACCCAAATTCATAC+AGG 0.557263 2_3:+50494164 Msa0296920:three_prime_UTR
GCTCAGATTTGGGATACTGC+TGG 0.571910 2_3:+50488442 Msa0296920:CDS
GAGCAAGAAAGCAGTTGAAG+CGG 0.576413 2_3:+50493863 Msa0296920:CDS
TACTTGTCTATGATGTCACC+AGG 0.586902 2_3:+50493598 Msa0296920:CDS
TCGCAACTCTTTCAACCACC+TGG 0.589547 2_3:-50493643 None:intergenic
TTATTGTCTGTCCTACAGAC+GGG 0.589827 2_3:-50493911 None:intergenic
AAAGCAGTTGAAGCGGGTGA+AGG 0.591230 2_3:+50493870 Msa0296920:CDS
GGGATACTGCTGGTCAGGAA+AGG 0.593119 2_3:+50488452 Msa0296920:CDS
TTTATTGTCTGTCCTACAGA+CGG 0.598655 2_3:-50493912 None:intergenic
CTTCTGTTGGGACAGCAACA+AGG 0.604051 2_3:-50493725 None:intergenic
GCTTACTACCGAGGAGCTGT+CGG 0.604595 2_3:+50493570 Msa0296920:CDS
TATTTGCTATGCTCCAGTAA+TGG 0.605685 2_3:+50494212 Msa0296920:three_prime_UTR
CCTGGCAGCGTTCTCAAATG+TGG 0.607575 2_3:-50493625 None:intergenic
GTAAAGCACCGACAGCTCCT+CGG 0.608510 2_3:-50493578 None:intergenic
TTGGGACAGCAACAAGGTGT+CGG 0.610129 2_3:-50493719 None:intergenic
TCCTCGTCAGTCCCGTCTGT+AGG 0.610460 2_3:+50493900 Msa0296920:CDS
TCACACAGACCCTAATATTG+TGG 0.615605 2_3:+50493668 Msa0296920:CDS
ATGGAGCAACCTGGATTGTG+CGG 0.618740 2_3:-50488078 None:intergenic
TGTAACGGTAGAATGAAGGA+GGG 0.625360 2_3:-50488170 None:intergenic
TTTGATTTGATTTGATGTAA+CGG 0.629354 2_3:-50488185 None:intergenic
GTTTGAGATGCAATAACTAG+AGG 0.632605 2_3:-50494327 None:intergenic
CTGCTTTCTTGCTCACTATG+CGG 0.632736 2_3:-50493854 None:intergenic
TCCTACAGACGGGACTGACG+AGG 0.654473 2_3:-50493901 None:intergenic
AGTAAGCACTAGTGATGGCA+CGG 0.659457 2_3:-50493554 None:intergenic
TCGGTAGTAAGCACTAGTGA+TGG 0.661244 2_3:-50493559 None:intergenic
ATCACTAGTGCTTACTACCG+AGG 0.674407 2_3:+50493561 Msa0296920:CDS
CATTTGAGAACGCTGCCAGG+TGG 0.693994 2_3:+50493628 Msa0296920:CDS
AGACATTTACAAGATGACAC+AGG 0.741946 2_3:-50494017 None:intergenic
TGTAGAAAATGCATTCACTG+AGG 0.755384 2_3:+50493815 Msa0296920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAAATAAAAAAAA+AGG - chr2_3:50489496-50489515 None:intergenic 0.0%
!! AAAAATTGAAATTAAAGAAA+AGG - chr2_3:50488495-50488514 None:intergenic 10.0%
!!! ATTGATAATTGATAAATAAA+GGG - chr2_3:50491659-50491678 None:intergenic 10.0%
!!! TATTGATAATTGATAAATAA+AGG - chr2_3:50491660-50491679 None:intergenic 10.0%
!!! AAGTTTTTTATTTTTTTTGA+GGG + chr2_3:50493018-50493037 Msa0296920:intron 10.0%
!! AAATAAGAACAAATCAATAA+GGG - chr2_3:50488555-50488574 None:intergenic 15.0%
!! TCAAAATTTAAACAATCAAT+CGG - chr2_3:50488685-50488704 None:intergenic 15.0%
!! TAATGTGATCAATAAATTTA+AGG - chr2_3:50489053-50489072 None:intergenic 15.0%
!! GTGTTTAAAAATAAAAATAG+AGG - chr2_3:50490288-50490307 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG - chr2_3:50491465-50491484 None:intergenic 15.0%
!! AACATGTAATTAAGAATTAT+TGG - chr2_3:50491805-50491824 None:intergenic 15.0%
!!! AGATTTTTTGGATAAAATTA+CGG - chr2_3:50492779-50492798 None:intergenic 15.0%
!! CTCAAAAAAAATAAAAAACT+TGG - chr2_3:50493019-50493038 None:intergenic 15.0%
!!! CAAGTTTTTTATTTTTTTTG+AGG + chr2_3:50493017-50493036 Msa0296920:intron 15.0%
!!! TTTGATTTGATTTGATGTAA+CGG - chr2_3:50488188-50488207 None:intergenic 20.0%
!! GAAATAAGAACAAATCAATA+AGG - chr2_3:50488556-50488575 None:intergenic 20.0%
!!! ATATGTAGTAGTAGTTTTTA+GGG + chr2_3:50488628-50488647 Msa0296920:intron 20.0%
!! CAAAATTTAAACAATCAATC+GGG - chr2_3:50488684-50488703 None:intergenic 20.0%
!!! AAACATTTTTGTTTATTTGC+CGG + chr2_3:50488772-50488791 Msa0296920:intron 20.0%
!!! AGTATGATTTTGTTTTTACA+CGG + chr2_3:50488813-50488832 Msa0296920:intron 20.0%
!!! AAATTTAAATCTGCACTTTT+TGG - chr2_3:50488922-50488941 None:intergenic 20.0%
!! ATTTAATTCATATACACTGT+CGG - chr2_3:50489030-50489049 None:intergenic 20.0%
!! TATTTCAAAATCGTTCTTAT+TGG + chr2_3:50489081-50489100 Msa0296920:intron 20.0%
!!! TTCAAAGTTTTCTATAAACT+TGG + chr2_3:50489113-50489132 Msa0296920:intron 20.0%
!!! AATAGTTTTCTAATCATTTC+AGG - chr2_3:50489544-50489563 None:intergenic 20.0%
!! TGAAATGATTAGAAAACTAT+TGG + chr2_3:50489543-50489562 Msa0296920:intron 20.0%
!! CAAGCATAGATAAAAATATT+CGG + chr2_3:50489800-50489819 Msa0296920:intron 20.0%
!! AAGCATAGATAAAAATATTC+GGG + chr2_3:50489801-50489820 Msa0296920:intron 20.0%
!!! TAAATCCTATTTTTTCAGAT+AGG - chr2_3:50490197-50490216 None:intergenic 20.0%
!! TCTGAAAAAATAGGATTTAT+AGG + chr2_3:50490198-50490217 Msa0296920:intron 20.0%
!! CTGAAAAAATAGGATTTATA+GGG + chr2_3:50490199-50490218 Msa0296920:intron 20.0%
!! TGAAAAAATAGGATTTATAG+GGG + chr2_3:50490200-50490219 Msa0296920:intron 20.0%
!!! ATTTTATGCAGAATCATAAA+GGG - chr2_3:50490662-50490681 None:intergenic 20.0%
!!! AAGATTACACATTTTCAAAT+GGG - chr2_3:50491425-50491444 None:intergenic 20.0%
!! ATTGATAAATAAAGGGAAAA+AGG - chr2_3:50491652-50491671 None:intergenic 20.0%
!!! TCTTTTTTTTTTTTTTGAGG+GGG - chr2_3:50491689-50491708 None:intergenic 20.0%
!!! CTCTTTTTTTTTTTTTTGAG+GGG - chr2_3:50491690-50491709 None:intergenic 20.0%
!!! GCTCTTTTTTTTTTTTTTGA+GGG - chr2_3:50491691-50491710 None:intergenic 20.0%
!!! AGCTCTTTTTTTTTTTTTTG+AGG - chr2_3:50491692-50491711 None:intergenic 20.0%
!!! CAGTTTTACATAGATTAATA+AGG - chr2_3:50492465-50492484 None:intergenic 20.0%
!! TGAACTTATGTTTATTACAT+AGG + chr2_3:50492486-50492505 Msa0296920:intron 20.0%
!!! GATTTTTTGGATAAAATTAC+GGG - chr2_3:50492778-50492797 None:intergenic 20.0%
!! TAAATGTTTACTATACTCAA+TGG + chr2_3:50493097-50493116 Msa0296920:intron 20.0%
!! CATTATCTTGTATAAATATG+AGG - chr2_3:50493142-50493161 None:intergenic 20.0%
!! TACTTAAAGATATAGAATGA+AGG + chr2_3:50493224-50493243 Msa0296920:intron 20.0%
!!! TTTTTTTGAATAAACTGAGT+TGG + chr2_3:50493411-50493430 Msa0296920:intron 20.0%
!! AAAGTTGTACTTAAACAAAT+AGG + chr2_3:50494144-50494163 Msa0296920:three_prime_UTR 20.0%
!! TGTAACAAAACTAAACATAT+GGG - chr2_3:50494288-50494307 None:intergenic 20.0%
!! ATGTAACAAAACTAAACATA+TGG - chr2_3:50494289-50494308 None:intergenic 20.0%
!!! CTTTTCAAACTAGTTCTAAT+CGG + chr2_3:50488289-50488308 Msa0296920:CDS 25.0%
!! GATATGTAGTAGTAGTTTTT+AGG + chr2_3:50488627-50488646 Msa0296920:intron 25.0%
!!! AATTTTGATACGCTGTTAAA+AGG + chr2_3:50488709-50488728 Msa0296920:intron 25.0%
!! AATCACGTATTCAATCATTT+TGG + chr2_3:50488872-50488891 Msa0296920:intron 25.0%
!! TATTCAATCATTTTGGACAT+CGG + chr2_3:50488879-50488898 Msa0296920:intron 25.0%
!! TTTTCTATAAACTTGGCATT+GGG + chr2_3:50489120-50489139 Msa0296920:intron 25.0%
! TTAAGGATTAAGGGTAATAA+AGG - chr2_3:50489314-50489333 None:intergenic 25.0%
! AGATAAGTAAGATTTGCAAA+GGG - chr2_3:50489666-50489685 None:intergenic 25.0%
! AAGATAAGTAAGATTTGCAA+AGG - chr2_3:50489667-50489686 None:intergenic 25.0%
! TTTATTAATCCATGTAACCA+TGG + chr2_3:50489685-50489704 Msa0296920:intron 25.0%
!!! TGCCCAAATAATATTGATTT+GGG + chr2_3:50489932-50489951 Msa0296920:intron 25.0%
! ACCCCAAATCAATATTATTT+GGG - chr2_3:50489937-50489956 None:intergenic 25.0%
! AACCCCAAATCAATATTATT+TGG - chr2_3:50489938-50489957 None:intergenic 25.0%
! CTTTGTAAGAAAAAATGAAG+AGG - chr2_3:50490239-50490258 None:intergenic 25.0%
!! TTTTAAACACAAGTTACTCA+TGG + chr2_3:50490298-50490317 Msa0296920:intron 25.0%
! TTTAAACACAAGTTACTCAT+GGG + chr2_3:50490299-50490318 Msa0296920:intron 25.0%
!! TTTTATGCAGAATCATAAAG+GGG - chr2_3:50490661-50490680 None:intergenic 25.0%
!! GATTTTATGCAGAATCATAA+AGG - chr2_3:50490663-50490682 None:intergenic 25.0%
! ACTATGTCGTATTAACTATT+AGG - chr2_3:50490727-50490746 None:intergenic 25.0%
! ACTTAAAAACACATGAACAT+TGG - chr2_3:50490979-50490998 None:intergenic 25.0%
!! TTATTGAGTTGCTTTAGATT+AGG + chr2_3:50491184-50491203 Msa0296920:intron 25.0%
! GTACAGTAGAATGTAATAAT+AGG + chr2_3:50491286-50491305 Msa0296920:intron 25.0%
!! CAAGATTACACATTTTCAAA+TGG - chr2_3:50491426-50491445 None:intergenic 25.0%
! AAATATGGTCAAAGTAAGTT+AGG - chr2_3:50491450-50491469 None:intergenic 25.0%
!!! TTTTTTTTTTTTTTGAGGGG+GGG - chr2_3:50491687-50491706 None:intergenic 25.0%
!!! CTTTTTTTTTTTTTTGAGGG+GGG - chr2_3:50491688-50491707 None:intergenic 25.0%
!! TTGTATTCATTTGATAGCAT+GGG + chr2_3:50491876-50491895 Msa0296920:intron 25.0%
! TAACAAATATCAAAGGGAAT+TGG - chr2_3:50492115-50492134 None:intergenic 25.0%
! ATGAGCTAACAAATATCAAA+GGG - chr2_3:50492121-50492140 None:intergenic 25.0%
! AAACGAGATAGAAATCTAAA+AGG - chr2_3:50492294-50492313 None:intergenic 25.0%
! TTAATAAGGATAACTGGATA+AGG - chr2_3:50492451-50492470 None:intergenic 25.0%
! CATAGATTAATAAGGATAAC+TGG - chr2_3:50492457-50492476 None:intergenic 25.0%
! AGATATTATGTGACTATGTT+AGG + chr2_3:50492822-50492841 Msa0296920:intron 25.0%
!! AGGGAATGATTTGTATAAAT+AGG + chr2_3:50492887-50492906 Msa0296920:intron 25.0%
!! GAATGATTTGTATAAATAGG+AGG + chr2_3:50492890-50492909 Msa0296920:intron 25.0%
! TGTTTGGATATAGAATAAAG+GGG - chr2_3:50493198-50493217 None:intergenic 25.0%
! CTGTTTGGATATAGAATAAA+GGG - chr2_3:50493199-50493218 None:intergenic 25.0%
! ATCAATTGCAAAAAAAATCG+AGG - chr2_3:50493391-50493410 None:intergenic 25.0%
!!! AGGATTTGTTTTTCTTATAG+CGG + chr2_3:50494114-50494133 Msa0296920:three_prime_UTR 25.0%
!! AATTGGAGTTTTTGAGGAAA+AGG - chr2_3:50488134-50488153 None:intergenic 30.0%
! AATTGGAATTGGAGTTTTTG+AGG - chr2_3:50488140-50488159 None:intergenic 30.0%
! GTAGAGTTTGTTTCAACTAT+TGG - chr2_3:50488212-50488231 None:intergenic 30.0%
! CGATTAGAACTAGTTTGAAA+AGG - chr2_3:50488291-50488310 None:intergenic 30.0%
TTGGAATCTAAATCCACTAT+TGG + chr2_3:50488370-50488389 Msa0296920:CDS 30.0%
TGTTGATGCTAAAGTCATTA+AGG + chr2_3:50488420-50488439 Msa0296920:CDS 30.0%
!!! TAGTAGTAGTTTTTAGGGTT+TGG + chr2_3:50488633-50488652 Msa0296920:intron 30.0%
TGTTAAAAGGTCGCAATAAT+TGG + chr2_3:50488722-50488741 Msa0296920:intron 30.0%
! GTTTTCTATAAACTTGGCAT+TGG + chr2_3:50489119-50489138 Msa0296920:intron 30.0%
TTTCTATAAACTTGGCATTG+GGG + chr2_3:50489121-50489140 Msa0296920:intron 30.0%
GTGTTTAAATCACTTTCAAG+TGG + chr2_3:50489195-50489214 Msa0296920:intron 30.0%
ATTTGAAAAAATTTCCACCG+AGG + chr2_3:50489267-50489286 Msa0296920:intron 30.0%
!! CTGTGGATTTTAAGGATTAA+GGG - chr2_3:50489323-50489342 None:intergenic 30.0%
!! TCTGTGGATTTTAAGGATTA+AGG - chr2_3:50489324-50489343 None:intergenic 30.0%
AAAGCAAGTCAACAAATGTA+CGG - chr2_3:50489349-50489368 None:intergenic 30.0%
! AGTTTTCTAATCATTTCAGG+AGG - chr2_3:50489541-50489560 None:intergenic 30.0%
! GTGCCCAAATAATATTGATT+TGG + chr2_3:50489931-50489950 Msa0296920:intron 30.0%
!! GCCCAAATAATATTGATTTG+GGG + chr2_3:50489933-50489952 Msa0296920:intron 30.0%
ATGATCCACTAATAGGAAAT+GGG - chr2_3:50490146-50490165 None:intergenic 30.0%
TATGATCCACTAATAGGAAA+TGG - chr2_3:50490147-50490166 None:intergenic 30.0%
CCACAAACATAAGTATAACT+GGG - chr2_3:50490173-50490192 None:intergenic 30.0%
CCAGTTATACTTATGTTTGT+GGG + chr2_3:50490171-50490190 Msa0296920:intron 30.0%
AATACGACATAGTGCTTATA+TGG + chr2_3:50490734-50490753 Msa0296920:intron 30.0%
!!! AGTGTTGGTTTTACAAAGAA+GGG - chr2_3:50490819-50490838 None:intergenic 30.0%
!!! AAGTGTTGGTTTTACAAAGA+AGG - chr2_3:50490820-50490839 None:intergenic 30.0%
TGACAGTAACACATTGATAT+CGG - chr2_3:50490947-50490966 None:intergenic 30.0%
!!! ATGTGTTTTTAAGTGCTTCA+TGG + chr2_3:50490985-50491004 Msa0296920:intron 30.0%
TCCACATATATAAAGGATAG+AGG + chr2_3:50491011-50491030 Msa0296920:intron 30.0%
ACCTCTATCCTTTATATATG+TGG - chr2_3:50491015-50491034 None:intergenic 30.0%
CATATATAAAGGATAGAGGT+AGG + chr2_3:50491015-50491034 Msa0296920:intron 30.0%
AACTCAATAACAGACCAATA+TGG - chr2_3:50491174-50491193 None:intergenic 30.0%
TTAAGCTCAAAATTGTGCAT+TGG + chr2_3:50491577-50491596 Msa0296920:intron 30.0%
TCAACTGTGTCAAGTATTAT+GGG + chr2_3:50491614-50491633 Msa0296920:intron 30.0%
!!! TTTTTTTTTTTTTGAGGGGG+GGG - chr2_3:50491686-50491705 None:intergenic 30.0%
ATCAAATGAATACAAGTTGC+AGG - chr2_3:50491871-50491890 None:intergenic 30.0%
! CTTGTATTCATTTGATAGCA+TGG + chr2_3:50491875-50491894 Msa0296920:intron 30.0%
! TGTATTCATTTGATAGCATG+GGG + chr2_3:50491877-50491896 Msa0296920:intron 30.0%
CATGAGCTAACAAATATCAA+AGG - chr2_3:50492122-50492141 None:intergenic 30.0%
ACCAGAACTTCTAGTAATAT+GGG - chr2_3:50492230-50492249 None:intergenic 30.0%
AAGAACTGAACTTGTATCAA+AGG + chr2_3:50492340-50492359 Msa0296920:intron 30.0%
TAACATCATATTCACTTCTG+CGG + chr2_3:50492381-50492400 Msa0296920:intron 30.0%
TCACGTTTGACAAAATTACT+AGG + chr2_3:50492672-50492691 Msa0296920:intron 30.0%
TATCTCTAGTTAGTGTATCA+GGG - chr2_3:50492807-50492826 None:intergenic 30.0%
ATATCTCTAGTTAGTGTATC+AGG - chr2_3:50492808-50492827 None:intergenic 30.0%
TATAGAAGCAGTCATCTATT+TGG + chr2_3:50492846-50492865 Msa0296920:intron 30.0%
ATAGAAGCAGTCATCTATTT+GGG + chr2_3:50492847-50492866 Msa0296920:intron 30.0%
! ATTTGGGACAGTTAATTAGA+TGG + chr2_3:50492863-50492882 Msa0296920:intron 30.0%
TTGAAAGAATGAGAAAGAAC+AGG + chr2_3:50492957-50492976 Msa0296920:intron 30.0%
TGAAAGAATGAGAAAGAACA+GGG + chr2_3:50492958-50492977 Msa0296920:intron 30.0%
ACATTTAGTAAATAGAGCAG+TGG - chr2_3:50493084-50493103 None:intergenic 30.0%
TGTATAAATATGAGGATGCA+AGG - chr2_3:50493134-50493153 None:intergenic 30.0%
CCTGTTTGGATATAGAATAA+AGG - chr2_3:50493200-50493219 None:intergenic 30.0%
CCTTTATTCTATATCCAAAC+AGG + chr2_3:50493197-50493216 Msa0296920:intron 30.0%
TCTTTAAGTAATAGCCTGTT+TGG - chr2_3:50493214-50493233 None:intergenic 30.0%
CATCTACTCAATATATTCTG+CGG + chr2_3:50493306-50493325 Msa0296920:intron 30.0%
ATTAGTTATGCCGTTAACAA+TGG + chr2_3:50493468-50493487 Msa0296920:intron 30.0%
TTAGTTATGCCGTTAACAAT+GGG + chr2_3:50493469-50493488 Msa0296920:intron 30.0%
TAAGCATGACCACAATATTA+GGG - chr2_3:50493680-50493699 None:intergenic 30.0%
ATAAGCATGACCACAATATT+AGG - chr2_3:50493681-50493700 None:intergenic 30.0%
AATATTGTGGTCATGCTTAT+TGG + chr2_3:50493681-50493700 Msa0296920:CDS 30.0%
! AGTGAATGCATTTTCTACAT+TGG - chr2_3:50493814-50493833 None:intergenic 30.0%
GAATTTCAACTTGTAGCATA+AGG + chr2_3:50494046-50494065 Msa0296920:three_prime_UTR 30.0%
! ATGTTTAAAGCATCATTTGC+AGG + chr2_3:50494094-50494113 Msa0296920:three_prime_UTR 30.0%
AACTTGACCTGTATGAATTT+GGG - chr2_3:50494174-50494193 None:intergenic 30.0%
AAACTTGACCTGTATGAATT+TGG - chr2_3:50494175-50494194 None:intergenic 30.0%
CAATAACTAGAGGATGTATA+TGG - chr2_3:50494320-50494339 None:intergenic 30.0%
AAGAAGAAAATGCGTTGTTC+CGG - chr2_3:50488106-50488125 None:intergenic 35.0%
GAATTTCGGTGAATTGGAAT+TGG - chr2_3:50488151-50488170 None:intergenic 35.0%
TAGAATGAAGGAGGGAATTT+CGG - chr2_3:50488165-50488184 None:intergenic 35.0%
TTGATGTAACGGTAGAATGA+AGG - chr2_3:50488177-50488196 None:intergenic 35.0%
AGTGAATCTAGAAAGCAAGT+TGG - chr2_3:50488335-50488354 None:intergenic 35.0%
CACTAGAAACGAGTTCAATT+TGG + chr2_3:50488351-50488370 Msa0296920:CDS 35.0%
AAGTCATTAAGGCTCAGATT+TGG + chr2_3:50488431-50488450 Msa0296920:CDS 35.0%
AGTCATTAAGGCTCAGATTT+GGG + chr2_3:50488432-50488451 Msa0296920:CDS 35.0%
TGTTGTCAATCACTCATTAC+CGG - chr2_3:50488794-50488813 None:intergenic 35.0%
GAAGTCGTTCGATAAAGATT+GGG - chr2_3:50488955-50488974 None:intergenic 35.0%
CATTCACGAATTCAAGACAT+CGG - chr2_3:50488977-50488996 None:intergenic 35.0%
GCGTGCACATGATAATTTAT+TGG + chr2_3:50489173-50489192 Msa0296920:intron 35.0%
TTGTCAAATAGTGGCTATAG+TGG + chr2_3:50489220-50489239 Msa0296920:intron 35.0%
TAACAAGTCACGTATGTACA+TGG - chr2_3:50489383-50489402 None:intergenic 35.0%
TTCTAATCATTTCAGGAGGT+TGG - chr2_3:50489537-50489556 None:intergenic 35.0%
CAAAGGGTGAAATATGTTCA+GGG - chr2_3:50489650-50489669 None:intergenic 35.0%
!! TTTTGACTACCATGGTTACA+TGG - chr2_3:50489697-50489716 None:intergenic 35.0%
!! GGGTTTTATGATCCACTAAT+AGG - chr2_3:50490153-50490172 None:intergenic 35.0%
CCCAGTTATACTTATGTTTG+TGG + chr2_3:50490170-50490189 Msa0296920:intron 35.0%
CCCACAAACATAAGTATAAC+TGG - chr2_3:50490174-50490193 None:intergenic 35.0%
!! ACTCTCTATTTCTGTTCTGT+AGG + chr2_3:50490390-50490409 Msa0296920:intron 35.0%
TCTGTAGGATTAGATGTTCA+TGG + chr2_3:50490405-50490424 Msa0296920:intron 35.0%
TCATAAAGGGGAGGTAAAAT+CGG - chr2_3:50490649-50490668 None:intergenic 35.0%
ACGTCTTTGATCATAAGTGT+TGG - chr2_3:50490834-50490853 None:intergenic 35.0%
ATGGCGTTCCACATATATAA+AGG + chr2_3:50491004-50491023 Msa0296920:intron 35.0%
ATAAAGGATAGAGGTAGGTA+TGG + chr2_3:50491020-50491039 Msa0296920:intron 35.0%
TACTGCAATTCATTGCAACT+AGG - chr2_3:50491056-50491075 None:intergenic 35.0%
AATAACAGACCAATATGGCT+GGG - chr2_3:50491169-50491188 None:intergenic 35.0%
!!! AATGGCCTTTGAAGCATTTT+GGG - chr2_3:50491355-50491374 None:intergenic 35.0%
GGAATGAATGAAAAGGTCAA+TGG - chr2_3:50491373-50491392 None:intergenic 35.0%
AGTAAGGGGAATGAATGAAA+AGG - chr2_3:50491380-50491399 None:intergenic 35.0%
TTCAAATGGGTCATCAATTG+CGG - chr2_3:50491412-50491431 None:intergenic 35.0%
GTCAACTGTGTCAAGTATTA+TGG + chr2_3:50491613-50491632 Msa0296920:intron 35.0%
!!! TTTTTTTTTTTTGAGGGGGG+GGG - chr2_3:50491685-50491704 None:intergenic 35.0%
TTGTGAAAACAAGTGGGATA+CGG - chr2_3:50491760-50491779 None:intergenic 35.0%
CCTTGATTGTGAAAACAAGT+GGG - chr2_3:50491766-50491785 None:intergenic 35.0%
TCCTTGATTGTGAAAACAAG+TGG - chr2_3:50491767-50491786 None:intergenic 35.0%
!! ACTTGTTTTCACAATCAAGG+AGG + chr2_3:50491766-50491785 Msa0296920:intron 35.0%
ATTAAGAATTATTGGCCAGC+TGG - chr2_3:50491797-50491816 None:intergenic 35.0%
! GTATTCATTTGATAGCATGG+GGG + chr2_3:50491878-50491897 Msa0296920:intron 35.0%
! TATTCATTTGATAGCATGGG+GGG + chr2_3:50491879-50491898 Msa0296920:intron 35.0%
AGATCGGAATTGCATTAACA+TGG - chr2_3:50491967-50491986 None:intergenic 35.0%
TGACAAAGTTGCATCAAGAT+CGG - chr2_3:50491983-50492002 None:intergenic 35.0%
ATTCTTTCCAACACCTTGTA+AGG + chr2_3:50492003-50492022 Msa0296920:intron 35.0%
! GAGCTTACAAATTGTTTCTC+AGG + chr2_3:50492157-50492176 Msa0296920:intron 35.0%
TAGTAATATGGGAGAACCTT+GGG - chr2_3:50492219-50492238 None:intergenic 35.0%
TCCCATATTACTAGAAGTTC+TGG + chr2_3:50492226-50492245 Msa0296920:intron 35.0%
CACCAGAACTTCTAGTAATA+TGG - chr2_3:50492231-50492250 None:intergenic 35.0%
CCATAATACAAATTGCAGCT+AGG - chr2_3:50492262-50492281 None:intergenic 35.0%
CCTAGCTGCAATTTGTATTA+TGG + chr2_3:50492259-50492278 Msa0296920:intron 35.0%
GATACAAGTTCAGTTCTTGA+TGG - chr2_3:50492338-50492357 None:intergenic 35.0%
AAGGATAACTGGATAAGGTT+TGG - chr2_3:50492446-50492465 None:intergenic 35.0%
GTGACAGTGTTGTAAAATAG+TGG + chr2_3:50492508-50492527 Msa0296920:intron 35.0%
CGTTTGACAAAATTACTAGG+TGG + chr2_3:50492675-50492694 Msa0296920:intron 35.0%
TGGTCTGTAAGTTGTTCATA+TGG + chr2_3:50492695-50492714 Msa0296920:intron 35.0%
GTTCATATGGCAAAGATAGT+AGG + chr2_3:50492708-50492727 Msa0296920:intron 35.0%
!!! ATCAGGGAGGTAAGATTTTT+TGG - chr2_3:50492791-50492810 None:intergenic 35.0%
GGACAGTTAATTAGATGGTA+GGG + chr2_3:50492868-50492887 Msa0296920:intron 35.0%
GAAAGAATGAGAAAGAACAG+GGG + chr2_3:50492959-50492978 Msa0296920:intron 35.0%
GGATATAGAATAAAGGGGAT+TGG - chr2_3:50493193-50493212 None:intergenic 35.0%
GTATCATCATCAGATACATG+TGG - chr2_3:50493279-50493298 None:intergenic 35.0%
AATAACTAACAAGAGAGACC+AGG - chr2_3:50493355-50493374 None:intergenic 35.0%
TGCTTTGCAACAAAAATGCA+CGG - chr2_3:50493438-50493457 None:intergenic 35.0%
AAGACTTTCCATCTTCTGTT+GGG - chr2_3:50493740-50493759 None:intergenic 35.0%
AAAGACTTTCCATCTTCTGT+TGG - chr2_3:50493741-50493760 None:intergenic 35.0%
TGTAGAAAATGCATTCACTG+AGG + chr2_3:50493815-50493834 Msa0296920:CDS 35.0%
TTTATTGTCTGTCCTACAGA+CGG - chr2_3:50493915-50493934 None:intergenic 35.0%
ACAGACAATAAACGTGAAAG+AGG + chr2_3:50493923-50493942 Msa0296920:CDS 35.0%
AAACGTGAAAGAGGATTCTT+CGG + chr2_3:50493932-50493951 Msa0296920:CDS 35.0%
!!! TCTTCGGTTTTGAAGAGATT+TGG + chr2_3:50493948-50493967 Msa0296920:CDS 35.0%
AGACATTTACAAGATGACAC+AGG - chr2_3:50494020-50494039 None:intergenic 35.0%
!! CATAAGGCTAGTCTTACATA+TGG + chr2_3:50494062-50494081 Msa0296920:three_prime_UTR 35.0%
!!! GCTAGTCTTACATATGGTTT+TGG + chr2_3:50494068-50494087 Msa0296920:three_prime_UTR 35.0%
!!! ACAGGTCAAGTTTTATTTGC+AGG + chr2_3:50494182-50494201 Msa0296920:three_prime_UTR 35.0%
!! TATTTGCTATGCTCCAGTAA+TGG + chr2_3:50494212-50494231 Msa0296920:three_prime_UTR 35.0%
! GTTTGAGATGCAATAACTAG+AGG - chr2_3:50494330-50494349 None:intergenic 35.0%
GTCGAAAAAGGAGAAAAGTG+TGG + chr2_3:50488041-50488060 Msa0296920:five_prime_UTR 40.0%
AAAATGCGTTGTTCCGGAAA+TGG - chr2_3:50488100-50488119 None:intergenic 40.0%
TGTAACGGTAGAATGAAGGA+GGG - chr2_3:50488173-50488192 None:intergenic 40.0%
ATGTAACGGTAGAATGAAGG+AGG - chr2_3:50488174-50488193 None:intergenic 40.0%
CACTTGTTCTTCTTCAACCA+TGG + chr2_3:50488234-50488253 Msa0296920:exon 40.0%
AGCGAATTCAACACCAATAG+TGG - chr2_3:50488386-50488405 None:intergenic 40.0%
AGCATCAACAGTCAAACTCT+TGG - chr2_3:50488410-50488429 None:intergenic 40.0%
ACAATCAATCGGGATACGAA+AGG - chr2_3:50488674-50488693 None:intergenic 40.0%
TACACGGACAGTGTAGAATT+CGG + chr2_3:50488829-50488848 Msa0296920:intron 40.0%
! TCAATCATTTTGGACATCGG+TGG + chr2_3:50488882-50488901 Msa0296920:intron 40.0%
! CAATCATTTTGGACATCGGT+GGG + chr2_3:50488883-50488902 Msa0296920:intron 40.0%
!! CTGCACTTTTTGGACCTAAT+CGG - chr2_3:50488912-50488931 None:intergenic 40.0%
GGAAGTCGTTCGATAAAGAT+TGG - chr2_3:50488956-50488975 None:intergenic 40.0%
TTCATATACACTGTCGGATC+CGG - chr2_3:50489024-50489043 None:intergenic 40.0%
!! CAAGTGGTGTTGTCAAATAG+TGG + chr2_3:50489211-50489230 Msa0296920:intron 40.0%
TCAGTAAAGCTGACATTCCT+CGG - chr2_3:50489287-50489306 None:intergenic 40.0%
! TACGGCATCTGTGGATTTTA+AGG - chr2_3:50489331-50489350 None:intergenic 40.0%
!! GTTGACTTGCTTTATGACCA+TGG + chr2_3:50489356-50489375 Msa0296920:intron 40.0%
!! GAGTATTGTGTTGATGACAC+TGG + chr2_3:50489407-50489426 Msa0296920:intron 40.0%
!! TATTGTGTTGATGACACTGG+TGG + chr2_3:50489410-50489429 Msa0296920:intron 40.0%
ACAAGTTACAACAACCCAAC+TGG + chr2_3:50489624-50489643 Msa0296920:intron 40.0%
AAATATGTTCAGGGCCAGTT+GGG - chr2_3:50489641-50489660 None:intergenic 40.0%
GCAAAGGGTGAAATATGTTC+AGG - chr2_3:50489651-50489670 None:intergenic 40.0%
!!! ACACACGATTTTGACTACCA+TGG - chr2_3:50489705-50489724 None:intergenic 40.0%
ACACAAGAGAAATACTTGCC+TGG + chr2_3:50489774-50489793 Msa0296920:intron 40.0%
CACAAGAGAAATACTTGCCT+GGG + chr2_3:50489775-50489794 Msa0296920:intron 40.0%
! TTTTATCTATGCTTGTGCCC+AGG - chr2_3:50489795-50489814 None:intergenic 40.0%
!! CAATCGGGTTTTGGTGAAAT+CGG + chr2_3:50489985-50490004 Msa0296920:intron 40.0%
!! AATCGGGTTTTGGTGAAATC+GGG + chr2_3:50489986-50490005 Msa0296920:intron 40.0%
CGAATCTGCAATTAACCAGT+GGG - chr2_3:50490022-50490041 None:intergenic 40.0%
ACGAATCTGCAATTAACCAG+TGG - chr2_3:50490023-50490042 None:intergenic 40.0%
TTCGTATGATCTGCGATTTC+TGG + chr2_3:50490045-50490064 Msa0296920:intron 40.0%
TCGTATGATCTGCGATTTCT+GGG + chr2_3:50490046-50490065 Msa0296920:intron 40.0%
AAAAGGGGTTTATGTAAGCC+TGG - chr2_3:50490099-50490118 None:intergenic 40.0%
! GCTTACATAAACCCCTTTTC+TGG + chr2_3:50490100-50490119 Msa0296920:intron 40.0%
AACGACCCATTTCCTATTAG+TGG + chr2_3:50490138-50490157 Msa0296920:intron 40.0%
GTGGGCCTATCTGAAAAAAT+AGG + chr2_3:50490189-50490208 Msa0296920:intron 40.0%
AAACACAAGTTACTCATGGG+CGG + chr2_3:50490302-50490321 Msa0296920:intron 40.0%
ATGAGGTAGAAGCAGAGAAA+AGG - chr2_3:50490328-50490347 None:intergenic 40.0%
! TTTTCTCTGCTTCTACCTCA+TGG + chr2_3:50490327-50490346 Msa0296920:intron 40.0%
TATGCAGAATCATAAAGGGG+AGG - chr2_3:50490658-50490677 None:intergenic 40.0%
CGACATAGTGCTTATATGGT+TGG + chr2_3:50490738-50490757 Msa0296920:intron 40.0%
CTTATGATCAAAGACGTGCA+TGG + chr2_3:50490837-50490856 Msa0296920:intron 40.0%
AGTGTCATGTTGTCAGACAT+CGG - chr2_3:50490876-50490895 None:intergenic 40.0%
CAACATGACACTGTCACATA+TGG + chr2_3:50490884-50490903 Msa0296920:intron 40.0%
TAATCACCAGAAGAACAGGA+GGG - chr2_3:50491109-50491128 None:intergenic 40.0%
ATAATCACCAGAAGAACAGG+AGG - chr2_3:50491110-50491129 None:intergenic 40.0%
GTGATAATCACCAGAAGAAC+AGG - chr2_3:50491113-50491132 None:intergenic 40.0%
AGATAGTTTCCCAGCCATAT+TGG + chr2_3:50491157-50491176 Msa0296920:intron 40.0%
CAATAACAGACCAATATGGC+TGG - chr2_3:50491170-50491189 None:intergenic 40.0%
! ACTGTACATTTTCCTACACC+CGG - chr2_3:50491273-50491292 None:intergenic 40.0%
!!! ATGGCCTTTGAAGCATTTTG+GGG - chr2_3:50491354-50491373 None:intergenic 40.0%
!!! CAATGGCCTTTGAAGCATTT+TGG - chr2_3:50491356-50491375 None:intergenic 40.0%
TCAAATGGGTCATCAATTGC+GGG - chr2_3:50491411-50491430 None:intergenic 40.0%
TGTCGTTAGATTTGTCTCGA+TGG + chr2_3:50491508-50491527 Msa0296920:intron 40.0%
GTCGTTAGATTTGTCTCGAT+GGG + chr2_3:50491509-50491528 Msa0296920:intron 40.0%
CTGTGTCAAGTATTATGGGA+CGG + chr2_3:50491618-50491637 Msa0296920:intron 40.0%
!!! TTTTTTTTTTTGAGGGGGGG+GGG - chr2_3:50491684-50491703 None:intergenic 40.0%
GATACGGCTACTAGTGTTAA+AGG - chr2_3:50491744-50491763 None:intergenic 40.0%
!! CCCACTTGTTTTCACAATCA+AGG + chr2_3:50491763-50491782 Msa0296920:intron 40.0%
! TCTAGTACTGAGATGTGTTC+TGG + chr2_3:50491833-50491852 Msa0296920:intron 40.0%
! CTAGTACTGAGATGTGTTCT+GGG + chr2_3:50491834-50491853 Msa0296920:intron 40.0%
! GGAAGAAAGAGATTAGTTGC+TGG - chr2_3:50492188-50492207 None:intergenic 40.0%
AGTAATATGGGAGAACCTTG+GGG - chr2_3:50492218-50492237 None:intergenic 40.0%
CTAGTAATATGGGAGAACCT+TGG - chr2_3:50492220-50492239 None:intergenic 40.0%
CAAACGTGAATCGCAGAAAA+TGG - chr2_3:50492661-50492680 None:intergenic 40.0%
TGGCAAAGATAGTAGGATGT+AGG + chr2_3:50492715-50492734 Msa0296920:intron 40.0%
GGGACAGTTAATTAGATGGT+AGG + chr2_3:50492867-50492886 Msa0296920:intron 40.0%
GTTGTAGTAGGGGAAATACT+TGG - chr2_3:50493057-50493076 None:intergenic 40.0%
TATGAGGATGCAAGGATAGA+GGG - chr2_3:50493126-50493145 None:intergenic 40.0%
ATATGAGGATGCAAGGATAG+AGG - chr2_3:50493127-50493146 None:intergenic 40.0%
ATTGGAGTAGTAAGAGCAGT+TGG - chr2_3:50493175-50493194 None:intergenic 40.0%
CTCAATATATTCTGCGGTAG+TGG + chr2_3:50493312-50493331 Msa0296920:intron 40.0%
ATTTCTCCGCCCATTGTTAA+CGG - chr2_3:50493481-50493500 None:intergenic 40.0%
GAACTGTGTGCTTCTGTAAT+AGG + chr2_3:50493529-50493548 Msa0296920:intron 40.0%
TACTTGTCTATGATGTCACC+AGG + chr2_3:50493598-50493617 Msa0296920:CDS 40.0%
TCACACAGACCCTAATATTG+TGG + chr2_3:50493668-50493687 Msa0296920:CDS 40.0%
! ATGGAAAGTCTTTTGCAGAG+AGG + chr2_3:50493748-50493767 Msa0296920:CDS 40.0%
! TGGAAAGTCTTTTGCAGAGA+GGG + chr2_3:50493749-50493768 Msa0296920:CDS 40.0%
TTATTGTCTGTCCTACAGAC+GGG - chr2_3:50493914-50493933 None:intergenic 40.0%
CATCTTGTAAATGTCTGCAC+TGG + chr2_3:50494024-50494043 Msa0296920:three_prime_UTR 40.0%
AGGACTACCCAAATTCATAC+AGG + chr2_3:50494164-50494183 Msa0296920:three_prime_UTR 40.0%
! GTTATTTGCTGCACCATTAC+TGG - chr2_3:50494228-50494247 None:intergenic 40.0%
AATCCAGGTTGCTCCATTTC+CGG + chr2_3:50488084-50488103 Msa0296920:five_prime_UTR 45.0%
AGGAGGGAATTTCGGTGAAT+TGG - chr2_3:50488157-50488176 None:intergenic 45.0%
TGTTCTTCTTCAACCATGGC+TGG + chr2_3:50488238-50488257 Msa0296920:exon 45.0%
!! CTAGTTCTAATCGGCGATTC+AGG + chr2_3:50488298-50488317 Msa0296920:CDS 45.0%
CGTGATTCACATACTACTGC+AGG - chr2_3:50488859-50488878 None:intergenic 45.0%
ATGCAAGAAATCCTGACTGC+AGG + chr2_3:50488994-50489013 Msa0296920:intron 45.0%
TGCAAGAAATCCTGACTGCA+GGG + chr2_3:50488995-50489014 Msa0296920:intron 45.0%
TAGTGGCTATAGTGGCACTA+TGG + chr2_3:50489228-50489247 Msa0296920:intron 45.0%
CACTATGGCGGTATGGTTTA+GGG + chr2_3:50489243-50489262 Msa0296920:intron 45.0%
CAACAAATGTACGGCATCTG+TGG - chr2_3:50489340-50489359 None:intergenic 45.0%
TCACGTATGTACATGGACCA+TGG - chr2_3:50489376-50489395 None:intergenic 45.0%
!! TCATTTCAGGAGGTTGGTGA+TGG - chr2_3:50489531-50489550 None:intergenic 45.0%
GAAATATGTTCAGGGCCAGT+TGG - chr2_3:50489642-50489661 None:intergenic 45.0%
GTGTGTACTCTTAATCGCTG+AGG - chr2_3:50489756-50489775 None:intergenic 45.0%
TTGGGCACACTCACATGAAA+TGG - chr2_3:50489919-50489938 None:intergenic 45.0%
! AGACTTGCTCCACACACAAT+CGG + chr2_3:50489969-50489988 Msa0296920:intron 45.0%
! TATGATCTGCGATTTCTGGG+TGG + chr2_3:50490049-50490068 Msa0296920:intron 45.0%
! ATGATCTGCGATTTCTGGGT+GGG + chr2_3:50490050-50490069 Msa0296920:intron 45.0%
!! TAAACCCCTTTTCTGGTACG+CGG + chr2_3:50490107-50490126 Msa0296920:intron 45.0%
AACTACCTTGCGTGTAACCT+TGG + chr2_3:50490691-50490710 Msa0296920:intron 45.0%
TATTAGGCCTGAGTTCACCA+AGG - chr2_3:50490711-50490730 None:intergenic 45.0%
TGTCAGACATCGGTACATGT+CGG - chr2_3:50490866-50490885 None:intergenic 45.0%
AATCACCAGAAGAACAGGAG+GGG - chr2_3:50491108-50491127 None:intergenic 45.0%
TTGGGACAGGATTGGAACTA+GGG - chr2_3:50491233-50491252 None:intergenic 45.0%
ATTGGGACAGGATTGGAACT+AGG - chr2_3:50491234-50491253 None:intergenic 45.0%
!!! TTTGAAGCATTTTGGGGTGG+GGG - chr2_3:50491348-50491367 None:intergenic 45.0%
!!! CTTTGAAGCATTTTGGGGTG+GGG - chr2_3:50491349-50491368 None:intergenic 45.0%
!!! CCTTTGAAGCATTTTGGGGT+GGG - chr2_3:50491350-50491369 None:intergenic 45.0%
! GTGCATTGGCATGCGTAATA+AGG + chr2_3:50491591-50491610 Msa0296920:intron 45.0%
TGTCAAGTATTATGGGACGG+AGG + chr2_3:50491621-50491640 Msa0296920:intron 45.0%
GTCAAGTATTATGGGACGGA+GGG + chr2_3:50491622-50491641 Msa0296920:intron 45.0%
!!! TTTTTTTTTTGAGGGGGGGG+GGG - chr2_3:50491683-50491702 None:intergenic 45.0%
AAAGAGCTTCCTTGTCCTCA+AGG + chr2_3:50491704-50491723 Msa0296920:intron 45.0%
TTCTTTCCACCTTGAGGACA+AGG - chr2_3:50491716-50491735 None:intergenic 45.0%
TGTCCTCAAGGTGGAAAGAA+AGG + chr2_3:50491716-50491735 Msa0296920:intron 45.0%
TGCCACTACTTTCTTCAGCA+AGG + chr2_3:50491916-50491935 Msa0296920:intron 45.0%
CTCCTTGCTGAAGAAAGTAG+TGG - chr2_3:50491921-50491940 None:intergenic 45.0%
! GTGGACTGAGTTTCTCATTG+TGG + chr2_3:50492037-50492056 Msa0296920:intron 45.0%
TGGAGTCACAGATTGGGTAT+GGG - chr2_3:50492095-50492114 None:intergenic 45.0%
TTGGAGTCACAGATTGGGTA+TGG - chr2_3:50492096-50492115 None:intergenic 45.0%
GGGAATTGGAGTCACAGATT+GGG - chr2_3:50492101-50492120 None:intergenic 45.0%
AGGGAATTGGAGTCACAGAT+TGG - chr2_3:50492102-50492121 None:intergenic 45.0%
! CCATAGCTCTATGGCGTATT+GGG + chr2_3:50492533-50492552 Msa0296920:intron 45.0%
GCGATACGCGATTTAGTACA+AGG + chr2_3:50492580-50492599 Msa0296920:intron 45.0%
ACGTGAATCGCAGAAAATGG+TGG - chr2_3:50492658-50492677 None:intergenic 45.0%
CTCTAGTTAGTGTATCAGGG+AGG - chr2_3:50492804-50492823 None:intergenic 45.0%
ATGAGGATGCAAGGATAGAG+GGG - chr2_3:50493125-50493144 None:intergenic 45.0%
!!! GTTCTAGTTTTGAAGCAGCC+TGG + chr2_3:50493334-50493353 Msa0296920:intron 45.0%
GTTATGCCGTTAACAATGGG+CGG + chr2_3:50493472-50493491 Msa0296920:intron 45.0%
ACACAGTTCAAGTGAGTAGC+AGG - chr2_3:50493518-50493537 None:intergenic 45.0%
AGTAAGCACTAGTGATGGCA+CGG - chr2_3:50493557-50493576 None:intergenic 45.0%
TCGGTAGTAAGCACTAGTGA+TGG - chr2_3:50493562-50493581 None:intergenic 45.0%
ATCACTAGTGCTTACTACCG+AGG + chr2_3:50493561-50493580 Msa0296920:CDS 45.0%
CTTCATGGAGACTTCTGCTT+TGG + chr2_3:50493782-50493801 Msa0296920:CDS 45.0%
CTGCTTTCTTGCTCACTATG+CGG - chr2_3:50493857-50493876 None:intergenic 45.0%
GAGCAAGAAAGCAGTTGAAG+CGG + chr2_3:50493863-50493882 Msa0296920:CDS 45.0%
AGCAAGAAAGCAGTTGAAGC+GGG + chr2_3:50493864-50493883 Msa0296920:CDS 45.0%
ATTTGGATGCTGCTCGAACT+AGG + chr2_3:50493965-50493984 Msa0296920:CDS 45.0%
GGTGCTTCATGTATGTCAGT+TGG + chr2_3:50493986-50494005 Msa0296920:exon 45.0%
!!! TTTTTTATTTATTTGAATTT+TGG + chr2_3:50488510-50488529 Msa0296920:intron 5.0%
CGAGGCTTACAGGTCGAAAA+AGG + chr2_3:50488029-50488048 Msa0296920:five_prime_UTR 50.0%
TACACGATTCCGCACAATCC+AGG + chr2_3:50488069-50488088 Msa0296920:five_prime_UTR 50.0%
ATGGAGCAACCTGGATTGTG+CGG - chr2_3:50488081-50488100 None:intergenic 50.0%
CTAATCGGCGATTCAGGTGT+TGG + chr2_3:50488304-50488323 Msa0296920:CDS 50.0%
! GCTCAGATTTGGGATACTGC+TGG + chr2_3:50488442-50488461 Msa0296920:CDS 50.0%
! GATTTGGGATACTGCTGGTC+AGG + chr2_3:50488447-50488466 Msa0296920:CDS 50.0%
ATCGGGATACGAAAGGAGCT+TGG - chr2_3:50488667-50488686 None:intergenic 50.0%
TGGCTATAGTGGCACTATGG+CGG + chr2_3:50489231-50489250 Msa0296920:intron 50.0%
ATAGTGGCACTATGGCGGTA+TGG + chr2_3:50489236-50489255 Msa0296920:intron 50.0%
GCACTATGGCGGTATGGTTT+AGG + chr2_3:50489242-50489261 Msa0296920:intron 50.0%
GTAAAGCTGACATTCCTCGG+TGG - chr2_3:50489284-50489303 None:intergenic 50.0%
!! TCAGGAGGTTGGTGATGGTT+AGG - chr2_3:50489526-50489545 None:intergenic 50.0%
!! TTGATTTGGGGTTGTGCCCA+TGG + chr2_3:50489945-50489964 Msa0296920:intron 50.0%
GTGTGGAGCAAGTCTTCCAT+GGG - chr2_3:50489964-50489983 None:intergenic 50.0%
TGTGTGGAGCAAGTCTTCCA+TGG - chr2_3:50489965-50489984 None:intergenic 50.0%
! GACTTGCTCCACACACAATC+GGG + chr2_3:50489970-50489989 Msa0296920:intron 50.0%
! CTCCACACACAATCGGGTTT+TGG + chr2_3:50489976-50489995 Msa0296920:intron 50.0%
CACCAAAACCCGATTGTGTG+TGG - chr2_3:50489981-50490000 None:intergenic 50.0%
TTATGTAAGCCTGGCGTGTG+CGG - chr2_3:50490090-50490109 None:intergenic 50.0%
!! AAACCCCTTTTCTGGTACGC+GGG + chr2_3:50490108-50490127 Msa0296920:intron 50.0%
TCAACCCGCGTACCAGAAAA+GGG - chr2_3:50490115-50490134 None:intergenic 50.0%
ACGAGATACATGTGAGGCAC+AGG - chr2_3:50490363-50490382 None:intergenic 50.0%
ACACGCACGAGATACATGTG+AGG - chr2_3:50490369-50490388 None:intergenic 50.0%
GTTCACCAAGGTTACACGCA+AGG - chr2_3:50490699-50490718 None:intergenic 50.0%
CGTGTAACCTTGGTGAACTC+AGG + chr2_3:50490701-50490720 Msa0296920:intron 50.0%
TTATATGGTTGGCGTGCTGC+TGG + chr2_3:50490749-50490768 Msa0296920:intron 50.0%
GTCAGACATCGGTACATGTC+GGG - chr2_3:50490865-50490884 None:intergenic 50.0%
AATTCCCCCTCCTGTTCTTC+TGG + chr2_3:50491100-50491119 Msa0296920:intron 50.0%
ATCACCAGAAGAACAGGAGG+GGG - chr2_3:50491107-50491126 None:intergenic 50.0%
GTTCCAATCCTGTCCCAATG+CGG + chr2_3:50491235-50491254 Msa0296920:intron 50.0%
AATCCTGTCCCAATGCGGAT+GGG + chr2_3:50491240-50491259 Msa0296920:intron 50.0%
CCCACCCCAAAATGCTTCAA+AGG + chr2_3:50491347-50491366 Msa0296920:intron 50.0%
!!! GCCTTTGAAGCATTTTGGGG+TGG - chr2_3:50491351-50491370 None:intergenic 50.0%
ATGGGTCATCAATTGCGGGA+CGG - chr2_3:50491407-50491426 None:intergenic 50.0%
ATCAAGGAGGTTCAACCAGC+TGG + chr2_3:50491779-50491798 Msa0296920:intron 50.0%
! CTGAGATGTGTTCTGGGCTT+TGG + chr2_3:50491840-50491859 Msa0296920:intron 50.0%
TTTCTTCCTGTCTTGCCCCA+AGG + chr2_3:50492200-50492219 Msa0296920:intron 50.0%
! ATAGTGGCGCCATAGCTCTA+TGG + chr2_3:50492524-50492543 Msa0296920:intron 50.0%
! GCCATAGCTCTATGGCGTAT+TGG + chr2_3:50492532-50492551 Msa0296920:intron 50.0%
CCCAATACGCCATAGAGCTA+TGG - chr2_3:50492536-50492555 None:intergenic 50.0%
GGGAGAGAGACAGAGAGAAT+AGG + chr2_3:50492979-50492998 Msa0296920:intron 50.0%
! CAGTGGCTCTGTTGTAGTAG+GGG - chr2_3:50493067-50493086 None:intergenic 50.0%
! GCAGTGGCTCTGTTGTAGTA+GGG - chr2_3:50493068-50493087 None:intergenic 50.0%
! AGCAGTGGCTCTGTTGTAGT+AGG - chr2_3:50493069-50493088 None:intergenic 50.0%
TGAGGATGCAAGGATAGAGG+GGG - chr2_3:50493124-50493143 None:intergenic 50.0%
TCGCAACTCTTTCAACCACC+TGG - chr2_3:50493646-50493665 None:intergenic 50.0%
TTGGGACAGCAACAAGGTGT+CGG - chr2_3:50493722-50493741 None:intergenic 50.0%
CTTCTGTTGGGACAGCAACA+AGG - chr2_3:50493728-50493747 None:intergenic 50.0%
GTTGCTGTCCCAACAGAAGA+TGG + chr2_3:50493729-50493748 Msa0296920:CDS 50.0%
GAGGGAGTCTCTCTACTTCA+TGG + chr2_3:50493767-50493786 Msa0296920:CDS 50.0%
AAAGCAGTTGAAGCGGGTGA+AGG + chr2_3:50493870-50493889 Msa0296920:CDS 50.0%
GTTCCGGAAATGGAGCAACC+TGG - chr2_3:50488090-50488109 None:intergenic 55.0%
GTCTGCTCTGTATCCAGCCA+TGG - chr2_3:50488254-50488273 None:intergenic 55.0%
GGGATACTGCTGGTCAGGAA+AGG + chr2_3:50488452-50488471 Msa0296920:CDS 55.0%
ACATCGGTGGGTGTCCGATT+AGG + chr2_3:50488895-50488914 Msa0296920:intron 55.0%
AATCCTGACTGCAGGGAAGC+CGG + chr2_3:50489002-50489021 Msa0296920:intron 55.0%
!! CGGGTTTTGGTGAAATCGGG+TGG + chr2_3:50489989-50490008 Msa0296920:intron 55.0%
TCGGGTGGAATCAATCCCAC+TGG + chr2_3:50490004-50490023 Msa0296920:intron 55.0%
CAACCCGCGTACCAGAAAAG+GGG - chr2_3:50490114-50490133 None:intergenic 55.0%
CTCAACCCGCGTACCAGAAA+AGG - chr2_3:50490116-50490135 None:intergenic 55.0%
ACAGGCAGAGAAAGGCCATG+AGG - chr2_3:50490345-50490364 None:intergenic 55.0%
TGTGAGGCACAGGCAGAGAA+AGG - chr2_3:50490353-50490372 None:intergenic 55.0%
CATCCGCATTGGGACAGGAT+TGG - chr2_3:50491241-50491260 None:intergenic 55.0%
CAATCCTGTCCCAATGCGGA+TGG + chr2_3:50491239-50491258 Msa0296920:intron 55.0%
GTGTTGCACCCATCCGCATT+GGG - chr2_3:50491251-50491270 None:intergenic 55.0%
AATGCGGATGGGTGCAACAC+CGG + chr2_3:50491251-50491270 Msa0296920:intron 55.0%
GTCATCAATTGCGGGACGGA+GGG - chr2_3:50491403-50491422 None:intergenic 55.0%
GAGCTTCCTTGTCCTCAAGG+TGG + chr2_3:50491707-50491726 Msa0296920:intron 55.0%
GCGCCTTTCTTTCCACCTTG+AGG - chr2_3:50491722-50491741 None:intergenic 55.0%
! GATGTGTTCTGGGCTTTGGC+TGG + chr2_3:50491844-50491863 Msa0296920:intron 55.0%
GCTTACTACCGAGGAGCTGT+CGG + chr2_3:50493570-50493589 Msa0296920:CDS 55.0%
!! GTAAAGCACCGACAGCTCCT+CGG - chr2_3:50493581-50493600 None:intergenic 55.0%
GTTCTCAAATGTGGCACGCC+TGG - chr2_3:50493619-50493638 None:intergenic 55.0%
CCTGGCAGCGTTCTCAAATG+TGG - chr2_3:50493628-50493647 None:intergenic 55.0%
CCACATTTGAGAACGCTGCC+AGG + chr2_3:50493625-50493644 Msa0296920:CDS 55.0%
CATTTGAGAACGCTGCCAGG+TGG + chr2_3:50493628-50493647 Msa0296920:CDS 55.0%
CTGGGTGGGAGTTGCGACAA+CGG + chr2_3:50490064-50490083 Msa0296920:intron 60.0%
! GGTGTTGCACCCATCCGCAT+TGG - chr2_3:50491252-50491271 None:intergenic 60.0%
ATGCGGATGGGTGCAACACC+GGG + chr2_3:50491252-50491271 Msa0296920:intron 60.0%
ATGGGTGCAACACCGGGTGT+AGG + chr2_3:50491258-50491277 Msa0296920:intron 60.0%
TTGCGGGACGGAGGGAGTAA+GGG - chr2_3:50491395-50491414 None:intergenic 60.0%
ATTGCGGGACGGAGGGAGTA+AGG - chr2_3:50491396-50491415 None:intergenic 60.0%
GGTCATCAATTGCGGGACGG+AGG - chr2_3:50491404-50491423 None:intergenic 60.0%
GGAGAACCTTGGGGCAAGAC+AGG - chr2_3:50492209-50492228 None:intergenic 60.0%
GCAGTTGAAGCGGGTGAAGG+TGG + chr2_3:50493873-50493892 Msa0296920:CDS 60.0%
TCCTCGTCAGTCCCGTCTGT+AGG + chr2_3:50493900-50493919 Msa0296920:CDS 60.0%
TCCTACAGACGGGACTGACG+AGG - chr2_3:50493904-50493923 None:intergenic 60.0%
GATCCGGCTTCCCTGCAGTC+AGG - chr2_3:50489008-50489027 None:intergenic 65.0%
GCACCCATCCGCATTGGGAC+AGG - chr2_3:50491246-50491265 None:intergenic 65.0%
TGCGGGACGGAGGGAGTAAG+GGG - chr2_3:50491394-50491413 None:intergenic 65.0%
CGACAACGGCCGCACACGCC+AGG + chr2_3:50490078-50490097 Msa0296920:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 50488029 50494359 50488029 ID=Msa0296920;Name=Msa0296920
chr2_3 mRNA 50488029 50494359 50488029 ID=Msa0296920-mRNA-1;Parent=Msa0296920;Name=Msa0296920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=224|1|1|1|0|1|2|373|218
chr2_3 exon 50488029 50488473 50488029 ID=Msa0296920-mRNA-1:exon:15886;Parent=Msa0296920-mRNA-1
chr2_3 exon 50493551 50494359 50493551 ID=Msa0296920-mRNA-1:exon:15887;Parent=Msa0296920-mRNA-1
chr2_3 five_prime_UTR 50488029 50488252 50488029 ID=Msa0296920-mRNA-1:five_prime_utr;Parent=Msa0296920-mRNA-1
chr2_3 CDS 50488253 50488473 50488253 ID=Msa0296920-mRNA-1:cds;Parent=Msa0296920-mRNA-1
chr2_3 CDS 50493551 50493986 50493551 ID=Msa0296920-mRNA-1:cds;Parent=Msa0296920-mRNA-1
chr2_3 three_prime_UTR 50493987 50494359 50493987 ID=Msa0296920-mRNA-1:three_prime_utr;Parent=Msa0296920-mRNA-1
Gene Sequence

>Msa0296920

ATGGCTGGATACAGAGCAGACGATGAATACGATTACCTTTTCAAACTAGTTCTAATCGGCGATTCAGGTGTTGGTAAATCCAACTTGCTTTCTAGATTCACTAGAAACGAGTTCAATTTGGAATCTAAATCCACTATTGGTGTTGAATTCGCTACCAAGAGTTTGACTGTTGATGCTAAAGTCATTAAGGCTCAGATTTGGGATACTGCTGGTCAGGAAAGGTACCGTGCCATCACTAGTGCTTACTACCGAGGAGCTGTCGGTGCTTTACTTGTCTATGATGTCACCAGGCGTGCCACATTTGAGAACGCTGCCAGGTGGTTGAAAGAGTTGCGAGATCACACAGACCCTAATATTGTGGTCATGCTTATTGGAAATAAGTCTGATCTCCGACACCTTGTTGCTGTCCCAACAGAAGATGGAAAGTCTTTTGCAGAGAGGGAGTCTCTCTACTTCATGGAGACTTCTGCTTTGGAAGCAACCAATGTAGAAAATGCATTCACTGAGGTTCTTTCTCAGATATACCGCATAGTGAGCAAGAAAGCAGTTGAAGCGGGTGAAGGTGGCAGTTCCTCGTCAGTCCCGTCTGTAGGACAGACAATAAACGTGAAAGAGGATTCTTCGGTTTTGAAGAGATTTGGATGCTGCTCGAACTAG
Protein sequence

>Msa0296920

MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN*