AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1138840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1138840 MtrunA17_Chr7g0219051 98.932 468 5 0 1 468 1 468 0.0 973
Msa1138840 MtrunA17_Chr1g0199991 54.957 464 190 9 7 465 8 457 0.0 521
Msa1138840 MtrunA17_Chr1g0199971 53.478 460 199 8 11 465 8 457 6.91e-178 506
Msa1138840 MtrunA17_Chr2g0309511 51.584 442 199 7 30 466 33 464 1.12e-168 483
Msa1138840 MtrunA17_Chr2g0309521 51.467 443 198 8 30 466 33 464 2.80e-168 482
Msa1138840 MtrunA17_Chr2g0318911 50.431 464 212 9 5 463 12 462 6.32e-166 476
Msa1138840 MtrunA17_Chr2g0309541 48.822 467 217 10 12 466 9 465 2.86e-164 472
Msa1138840 MtrunA17_Chr4g0038311 49.455 459 222 7 12 465 11 464 1.89e-160 462
Msa1138840 MtrunA17_Chr3g0090331 50.909 440 197 7 28 464 67 490 3.80e-159 460
Msa1138840 MtrunA17_Chr4g0020241 50.114 437 201 4 29 464 67 487 1.48e-155 451
Msa1138840 MtrunA17_Chr4g0047861 47.216 449 232 3 22 466 40 487 5.51e-150 436
Msa1138840 MtrunA17_Chr2g0281621 46.405 459 242 3 11 466 10 467 1.25e-147 429
Msa1138840 MtrunA17_Chr4g0068841 47.193 481 223 8 9 464 3 477 3.26e-146 426
Msa1138840 MtrunA17_Chr3g0118841 49.883 429 194 6 34 460 77 486 2.58e-143 419
Msa1138840 MtrunA17_Chr3g0118881 48.344 453 202 8 25 464 65 498 3.82e-143 419
Msa1138840 MtrunA17_Chr3g0118851 50.917 436 180 10 34 460 76 486 3.32e-142 416
Msa1138840 MtrunA17_Chr1g0153881 47.489 438 203 6 32 466 86 499 1.23e-141 415
Msa1138840 MtrunA17_Chr1g0153941 45.435 471 211 9 24 468 65 515 1.40e-136 403
Msa1138840 MtrunA17_Chr3g0118831 46.469 439 184 5 29 465 71 460 4.92e-128 379
Msa1138840 MtrunA17_Chr2g0281641 46.736 383 201 1 87 466 7 389 2.06e-126 372
Msa1138840 MtrunA17_Chr5g0431301 42.283 473 248 8 8 468 6 465 1.41e-125 373
Msa1138840 MtrunA17_Chr3g0126051 41.649 473 259 6 5 468 3 467 5.57e-124 369
Msa1138840 MtrunA17_Chr3g0126031 42.227 476 249 9 3 468 1 460 2.08e-122 365
Msa1138840 MtrunA17_Chr3g0118861 45.618 445 180 7 29 460 69 464 1.39e-121 363
Msa1138840 MtrunA17_Chr4g0068861 44.749 438 217 9 3 420 44 476 2.02e-121 363
Msa1138840 MtrunA17_Chr3g0118891 46.620 429 176 7 34 460 76 453 2.49e-121 362
Msa1138840 MtrunA17_Chr8g0385871 45.045 444 220 9 34 465 32 463 1.04e-120 360
Msa1138840 MtrunA17_Chr3g0131731 42.737 475 240 11 7 467 8 464 1.69e-120 360
Msa1138840 MtrunA17_Chr7g0221551 42.793 444 228 8 34 465 29 458 2.70e-120 359
Msa1138840 MtrunA17_Chr3g0094811 41.438 473 241 9 7 467 9 457 3.65e-115 346
Msa1138840 MtrunA17_Chr2g0304931 41.775 462 238 11 16 464 19 462 9.68e-115 345
Msa1138840 MtrunA17_Chr1g0204191 34.829 468 246 13 12 465 69 491 1.02e-81 261
Msa1138840 MtrunA17_Chr8g0338461 32.525 495 285 13 12 463 7 495 5.25e-80 256
Msa1138840 MtrunA17_Chr7g0234051 31.558 507 285 16 7 463 1 495 1.99e-77 250
Msa1138840 MtrunA17_Chr7g0249431 33.665 502 275 17 11 463 6 498 1.25e-74 243
Msa1138840 MtrunA17_Chr1g0153931 57.436 195 79 3 24 214 63 257 2.31e-70 224
Msa1138840 MtrunA17_Chr1g0165811 44.747 257 124 6 15 264 14 259 4.00e-68 218
Msa1138840 MtrunA17_Chr1g0153921 42.678 239 113 6 231 468 4 219 1.21e-58 192
Msa1138840 MtrunA17_Chr7g0234041 30.085 472 238 15 13 423 4 444 1.86e-55 191
Msa1138840 MtrunA17_Chr2g0285351 28.602 472 300 12 15 463 12 469 1.22e-53 186
Msa1138840 MtrunA17_Chr4g0009701 30.044 456 278 15 30 463 34 470 1.67e-52 183
Msa1138840 MtrunA17_Chr4g0009671 29.561 433 285 12 42 463 12 435 5.69e-52 181
Msa1138840 MtrunA17_Chr2g0285371 28.508 449 281 13 39 463 37 469 6.35e-52 182
Msa1138840 MtrunA17_Chr4g0009651 30.155 451 274 18 35 463 39 470 4.58e-51 179
Msa1138840 MtrunA17_Chr4g0009681 29.684 475 289 15 11 463 16 467 2.11e-50 178
Msa1138840 MtrunA17_Chr4g0009661 31.140 456 273 19 30 463 34 470 2.97e-50 177
Msa1138840 MtrunA17_Chr3g0133011 28.866 485 311 16 5 463 20 496 1.12e-49 176
Msa1138840 MtrunA17_Chr2g0285381 30.023 443 275 15 39 463 40 465 3.29e-49 174
Msa1138840 MtrunA17_Chr4g0009711 29.139 453 286 16 30 463 34 470 8.53e-49 174
Msa1138840 MtrunA17_Chr3g0093971 26.427 473 310 14 1 459 2 450 1.20e-45 165
Msa1138840 MtrunA17_Chr4g0009641 28.266 467 282 17 11 463 19 446 5.79e-45 162
Msa1138840 MtrunA17_Chr2g0327401 27.064 436 254 14 51 461 102 498 2.73e-39 148
Msa1138840 MtrunA17_Chr4g0044051 28.118 441 259 16 43 463 39 441 4.12e-39 147
Msa1138840 MtrunA17_Chr4g0028271 28.935 432 248 17 51 460 99 493 1.62e-38 146
Msa1138840 MtrunA17_Chr4g0028281 27.088 443 244 16 51 461 97 492 3.21e-38 145
Msa1138840 MtrunA17_Chr2g0327381 25.991 454 281 16 51 461 96 537 5.18e-38 145
Msa1138840 MtrunA17_Chr1g0199171 26.959 434 254 15 51 460 92 486 1.05e-37 144
Msa1138840 MtrunA17_Chr4g0028241 27.166 427 266 13 52 461 92 490 1.17e-37 144
Msa1138840 MtrunA17_Chr4g0028261 28.571 455 262 19 31 460 99 515 2.67e-37 143
Msa1138840 MtrunA17_Chr1g0171411 26.606 436 262 16 47 460 81 480 3.16e-36 139
Msa1138840 MtrunA17_Chr4g0009721 25.902 471 265 17 11 463 15 419 1.30e-33 131
Msa1138840 MtrunA17_Chr5g0447441 27.419 434 255 17 51 463 43 437 2.88e-33 130
Msa1138840 MtrunA17_Chr1g0165821 40.909 154 83 3 317 465 29 179 9.69e-32 120
Msa1138840 MtrunA17_Chr2g0327371 25.502 498 298 20 13 461 40 513 2.19e-31 126
Msa1138840 MtrunA17_Chr7g0229631 46.154 130 63 4 1 129 1 124 1.75e-26 104
Msa1138840 MtrunA17_Chr2g0279371 32.500 160 98 4 46 200 27 181 1.58e-22 94.7
Msa1138840 MtrunA17_Chr7g0229611 50.000 94 43 2 12 105 5 94 5.37e-21 87.8
Msa1138840 MtrunA17_Chr7g0229621 51.613 93 41 2 12 104 5 93 1.30e-20 86.7
Msa1138840 MtrunA17_Chr4g0027731 23.690 439 282 14 52 458 36 453 1.08e-17 85.5
Msa1138840 MtrunA17_Chr2g0320571 26.457 446 262 15 52 453 36 459 1.22e-17 85.1
Msa1138840 MtrunA17_Chr7g0229651 27.094 203 120 4 214 403 1 188 2.22e-17 80.5
Msa1138840 MtrunA17_Chr2g0281631 44.186 86 37 2 11 87 14 97 3.22e-15 72.0
Msa1138840 MtrunA17_Chr4g0068851 65.217 46 16 0 419 464 15 60 1.60e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1138840 AT3G02110.1 75.966 466 106 2 7 466 8 473 0.0 757
Msa1138840 AT4G30610.1 62.256 461 169 4 9 465 4 463 0.0 610
Msa1138840 AT2G24010.1 60.502 438 161 3 30 465 25 452 0.0 563
Msa1138840 AT2G24000.1 60.544 441 166 6 30 465 25 462 0.0 554
Msa1138840 AT2G24010.2 58.278 453 162 4 30 465 25 467 0.0 550
Msa1138840 AT2G24010.3 55.297 472 159 5 36 465 2 463 0.0 529
Msa1138840 AT2G35780.1 56.264 439 177 6 30 464 24 451 4.20e-180 511
Msa1138840 AT3G07990.1 55.782 441 178 7 30 464 28 457 1.31e-175 501
Msa1138840 AT4G30810.1 52.632 437 197 6 30 463 32 461 1.99e-166 478
Msa1138840 AT5G23210.1 50.661 454 199 9 31 464 47 495 4.15e-156 452
Msa1138840 AT3G63470.1 49.103 446 206 6 23 464 69 497 8.17e-156 452
Msa1138840 AT2G35770.1 49.241 461 212 10 11 464 13 458 1.03e-149 435
Msa1138840 AT1G61130.1 48.060 464 223 9 10 464 6 460 3.62e-147 428
Msa1138840 AT5G08260.1 48.444 450 220 7 25 464 29 476 1.67e-146 427
Msa1138840 AT1G11080.1 48.214 448 212 7 32 464 47 489 2.21e-144 422
Msa1138840 AT1G11080.2 48.214 448 212 7 32 464 47 489 2.28e-144 422
Msa1138840 AT2G24010.4 55.342 365 136 4 36 383 2 356 1.86e-143 415
Msa1138840 AT4G15100.1 45.842 469 236 7 8 463 17 480 1.94e-142 417
Msa1138840 AT3G52020.1 45.291 446 226 8 23 464 67 498 8.19e-137 403
Msa1138840 AT5G23210.3 48.780 410 185 9 31 420 47 451 1.40e-132 391
Msa1138840 AT3G17180.1 46.171 444 227 10 31 464 34 475 3.05e-131 388
Msa1138840 AT5G23210.5 49.127 401 179 9 84 464 5 400 3.16e-128 378
Msa1138840 AT2G33530.1 46.847 444 212 8 34 465 32 463 1.92e-127 378
Msa1138840 AT5G23210.2 49.118 397 177 9 88 464 8 399 6.55e-127 374
Msa1138840 AT5G42240.1 44.444 450 229 8 27 464 24 464 1.06e-126 376
Msa1138840 AT1G43780.1 43.975 473 239 10 8 464 8 470 2.00e-126 376
Msa1138840 AT2G05850.1 43.792 443 227 7 31 466 59 486 1.58e-124 371
Msa1138840 AT2G12480.3 44.397 464 238 11 10 464 5 457 4.00e-124 370
Msa1138840 AT5G42230.1 42.241 464 244 7 13 464 9 460 2.66e-123 368
Msa1138840 AT5G42230.2 42.241 464 244 7 13 464 9 460 2.66e-123 368
Msa1138840 AT1G28110.1 43.162 468 238 8 11 465 7 459 3.28e-122 365
Msa1138840 AT1G28110.2 43.162 468 238 8 11 465 7 459 3.28e-122 365
Msa1138840 AT3G52000.1 44.444 441 222 10 31 466 59 481 1.31e-118 356
Msa1138840 AT2G12480.4 42.888 464 221 10 10 464 5 433 2.88e-118 354
Msa1138840 AT3G52010.1 43.311 441 227 8 31 464 60 484 4.97e-117 352
Msa1138840 AT2G12480.1 42.457 464 221 10 10 464 5 431 1.29e-116 350
Msa1138840 AT2G12480.2 42.366 465 221 11 10 464 5 432 9.29e-115 345
Msa1138840 AT3G17180.2 43.457 405 218 9 31 426 34 436 8.36e-112 337
Msa1138840 AT2G24000.2 55.782 294 122 6 177 465 109 399 4.04e-108 326
Msa1138840 AT2G24000.2 71.277 94 26 1 30 122 25 118 3.78e-39 146
Msa1138840 AT5G23210.4 46.742 353 163 9 88 420 8 355 2.61e-103 313
Msa1138840 AT4G12910.1 34.211 494 274 15 13 463 12 497 4.63e-81 259
Msa1138840 AT3G25420.1 33.260 457 259 12 48 463 43 494 8.04e-72 236
Msa1138840 AT4G12910.2 32.965 452 253 14 13 422 12 455 8.33e-67 221
Msa1138840 AT3G56540.1 57.485 167 70 1 23 189 67 232 3.17e-64 209
Msa1138840 AT2G22990.1 32.110 436 257 14 39 463 26 433 1.33e-61 207
Msa1138840 AT2G22920.2 31.364 440 255 15 39 463 28 435 5.18e-58 197
Msa1138840 AT2G23000.1 29.613 439 266 14 39 463 28 437 3.00e-56 193
Msa1138840 AT2G23000.2 29.613 439 266 14 39 463 28 437 3.00e-56 193
Msa1138840 AT2G22970.1 30.892 437 259 15 39 463 28 433 1.27e-55 191
Msa1138840 AT2G22990.4 32.195 410 240 13 39 437 26 408 6.79e-55 189
Msa1138840 AT2G22990.3 32.117 411 241 13 39 438 26 409 8.22e-55 190
Msa1138840 AT3G12203.1 29.828 466 272 15 10 463 15 437 9.83e-55 189
Msa1138840 AT2G23010.1 29.289 478 269 16 11 463 4 437 1.92e-54 188
Msa1138840 AT3G12203.3 30.892 437 258 14 39 463 12 416 3.22e-54 187
Msa1138840 AT2G22980.1 29.724 434 264 12 39 463 29 430 3.36e-54 187
Msa1138840 AT2G22990.5 30.963 436 253 15 39 463 26 424 5.89e-54 186
Msa1138840 AT1G73280.1 30.979 439 262 14 36 463 33 441 6.47e-54 187
Msa1138840 AT2G23010.2 29.079 478 270 16 11 463 4 437 1.27e-53 186
Msa1138840 AT1G73270.2 30.822 438 258 14 39 463 36 441 1.38e-53 186
Msa1138840 AT1G73270.1 30.822 438 258 14 39 463 36 441 1.52e-53 186
Msa1138840 AT3G12220.1 31.818 440 251 17 39 463 30 435 1.58e-52 183
Msa1138840 AT1G33540.1 31.057 454 269 18 36 463 29 464 1.78e-52 184
Msa1138840 AT1G73300.1 30.068 439 260 15 39 463 36 441 1.78e-51 180
Msa1138840 AT1G73300.2 30.068 439 260 15 39 463 36 441 1.78e-51 180
Msa1138840 AT3G12203.2 30.900 411 241 13 64 463 1 379 2.30e-51 178
Msa1138840 AT1G73310.1 30.505 436 262 14 39 463 36 441 2.78e-51 180
Msa1138840 AT3G12220.2 31.442 423 246 15 53 463 15 405 2.98e-51 179
Msa1138840 AT3G10450.1 29.587 436 266 13 39 463 32 437 3.90e-51 179
Msa1138840 AT1G33540.2 30.734 436 259 17 53 463 4 421 4.20e-51 179
Msa1138840 AT3G12240.1 31.222 442 251 18 39 463 31 436 1.41e-50 178
Msa1138840 AT2G22970.3 30.751 413 244 14 39 439 28 410 3.91e-50 177
Msa1138840 AT3G10450.2 29.216 421 258 12 53 463 4 394 6.47e-50 175
Msa1138840 AT3G12230.1 30.892 437 259 14 39 463 30 435 7.86e-50 176
Msa1138840 AT2G22970.4 30.583 412 244 14 39 438 28 409 8.27e-50 175
Msa1138840 AT1G73290.1 29.724 434 266 14 39 463 35 438 1.27e-49 175
Msa1138840 AT2G22920.1 30.827 399 231 13 39 423 28 395 7.96e-49 172
Msa1138840 AT5G09640.1 28.958 480 293 17 11 463 7 465 9.34e-49 174
Msa1138840 AT5G36180.1 29.148 446 255 15 39 463 36 441 2.29e-48 172
Msa1138840 AT2G22980.2 29.340 409 249 11 39 438 29 406 8.56e-48 170
Msa1138840 AT2G22980.4 28.878 419 258 11 39 448 29 416 2.00e-47 169
Msa1138840 AT3G10450.4 28.954 411 252 12 39 438 32 413 2.75e-43 158
Msa1138840 AT3G45010.1 27.876 452 274 14 34 461 76 499 4.09e-43 159
Msa1138840 AT1G73310.2 29.574 399 242 12 39 427 36 405 1.60e-42 156
Msa1138840 AT2G22990.6 30.925 346 207 11 123 463 1 319 1.92e-42 153
Msa1138840 AT3G10450.3 28.535 396 244 11 53 438 4 370 3.76e-42 154
Msa1138840 AT2G22990.2 30.636 346 208 11 123 463 1 319 9.36e-42 151
Msa1138840 AT5G22980.1 26.402 428 273 14 47 461 96 494 1.24e-41 155
Msa1138840 AT1G73290.3 28.753 393 243 11 39 423 35 398 7.97e-40 148
Msa1138840 AT1G73280.4 29.558 362 221 11 107 463 7 339 5.71e-38 141
Msa1138840 AT2G22920.4 33.585 265 155 9 39 289 28 285 5.92e-38 141
Msa1138840 AT3G10410.1 26.620 432 253 14 51 458 101 492 8.34e-38 145
Msa1138840 AT1G73280.3 29.738 343 207 11 126 463 1 314 5.48e-35 133
Msa1138840 AT2G22970.2 32.443 262 161 9 39 289 28 284 5.76e-35 133
Msa1138840 AT1G73280.2 35.586 222 134 5 36 250 33 252 1.51e-34 133
Msa1138840 AT2G22980.3 32.819 259 158 7 39 287 29 281 1.52e-34 132
Msa1138840 AT1G73290.2 33.790 219 136 5 39 250 35 251 8.90e-34 129
Msa1138840 AT5G36180.5 27.688 372 215 12 107 463 7 339 1.79e-32 126
Msa1138840 AT5G36180.3 27.688 372 215 12 107 463 7 339 1.79e-32 126
Msa1138840 AT1G15000.1 41.040 173 95 5 51 220 37 205 2.03e-32 128
Msa1138840 AT3G12220.3 35.371 229 136 7 39 258 30 255 1.06e-30 122
Msa1138840 AT3G12220.3 32.237 152 92 6 316 463 239 383 3.63e-13 71.2
Msa1138840 AT2G22980.5 27.586 319 198 8 123 438 1 289 7.62e-30 118
Msa1138840 AT1G73310.3 28.308 325 201 9 107 427 7 303 1.11e-27 113
Msa1138840 AT5G36180.2 26.801 347 201 11 107 438 7 315 1.64e-26 109
Msa1138840 AT5G36180.4 25.275 364 208 11 107 444 7 332 2.20e-23 101
Msa1138840 AT2G22920.3 28.269 283 166 10 189 463 3 256 4.07e-23 98.6
Msa1138840 AT5G22960.1 33.333 195 98 7 41 234 25 188 2.54e-22 94.7
Msa1138840 AT2G27920.1 27.962 211 132 7 12 217 5 200 3.29e-15 78.2
Msa1138840 AT2G22960.1 31.206 141 92 4 324 463 48 184 3.74e-15 73.9

Find 145 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTCATTGGATTCTTTC+TGG 0.067658 7_4:-8779500 None:intergenic
CCACTTGTTATTTGGCTTAA+TGG 0.092138 7_4:+8773701 Msa1138840:CDS
TCAACAAACCACTTGTTATT+TGG 0.132705 7_4:+8773693 Msa1138840:CDS
AAGAAGAGGTAGTATTTAAT+TGG 0.160926 7_4:+8782081 Msa1138840:three_prime_UTR
TTGTATAGATATACTAATTT+TGG 0.184278 7_4:-8773176 None:intergenic
TATGAGTGTCATAAACAATT+TGG 0.226637 7_4:-8773250 None:intergenic
TTTCTTTGATCCATGACTTT+AGG 0.253615 7_4:-8773458 None:intergenic
GTTAGGCGTGTCTGCCCTTT+AGG 0.264363 7_4:-8773315 None:intergenic
TATGCTATGGATCAAGAATT+TGG 0.282927 7_4:+8779537 Msa1138840:CDS
GCATATCTTGTTGCTGTAAC+TGG 0.291457 7_4:-8781104 None:intergenic
AGATTAAACAAAACAGCTTC+TGG 0.300423 7_4:+8777074 Msa1138840:CDS
CAACCGGTCTTCCGACCTTC+TGG 0.301740 7_4:+8777181 Msa1138840:CDS
CTTATAAGTGGACTGCTTGC+AGG 0.308616 7_4:+8780406 Msa1138840:CDS
AGTGGCCAACCTTCTATTCT+TGG 0.309162 7_4:+8777127 Msa1138840:CDS
TAGCTCATGGAGTAAGAGTT+TGG 0.323540 7_4:+8780609 Msa1138840:CDS
GATTCCCACGTTACAAGAAT+AGG 0.329077 7_4:+8778238 Msa1138840:CDS
ATATAAAGATTCACATTCAT+TGG 0.330653 7_4:-8779511 None:intergenic
CTGCAAGCAGTCCACTTATA+AGG 0.332916 7_4:-8780405 None:intergenic
TCTTCCAAAAGTCCTAAAAT+AGG 0.335470 7_4:+8782053 Msa1138840:CDS
AATTGCTTAAACAAAACTTT+AGG 0.358398 7_4:-8773593 None:intergenic
GGAGAGAGAATTTGAGAGAT+AGG 0.364375 7_4:-8773280 None:intergenic
CATCAATCTCAAGGGAATAA+TGG 0.366955 7_4:+8778353 Msa1138840:CDS
CCCTTTAGGAAGGATTAAAT+AGG 0.370188 7_4:-8773301 None:intergenic
GATAGGATCTTCAAGCTTCC+TGG 0.374484 7_4:+8773566 Msa1138840:CDS
ATAATTTCCTTTGCTAATTG+AGG 0.390270 7_4:-8778303 None:intergenic
CCTATTTAATCCTTCCTAAA+GGG 0.390656 7_4:+8773301 Msa1138840:five_prime_UTR
CTTGAGATTGATGCGTTGCT+TGG 0.391121 7_4:-8778343 None:intergenic
ATGCAGAAGTTTACTACAAT+AGG 0.398481 7_4:+8780340 Msa1138840:CDS
TTAGTATATCTATACAAAAT+AGG 0.402021 7_4:+8773182 Msa1138840:five_prime_UTR
GTTACTGTTAATCATGTTGC+TGG 0.406670 7_4:+8773626 Msa1138840:CDS
ATGAGTGTCATAAACAATTT+GGG 0.408800 7_4:-8773249 None:intergenic
TTATTCAAATCATTCCTTGC+AGG 0.408953 7_4:+8782024 Msa1138840:CDS
AGAAGAGGTAGTATTTAATT+GGG 0.409392 7_4:+8782082 Msa1138840:three_prime_UTR
TACAAATTCTAGAGAGTCCT+TGG 0.417853 7_4:-8778199 None:intergenic
GTAGCAAATTAACAAGTTAG+AGG 0.424238 7_4:+8782238 Msa1138840:three_prime_UTR
CTAAAATACCATGGTATCCT+TGG 0.425051 7_4:+8781150 Msa1138840:CDS
TCCTATTTAATCCTTCCTAA+AGG 0.425383 7_4:+8773300 Msa1138840:five_prime_UTR
TAGTTGTATATGAGAGTGAT+AGG 0.428665 7_4:-8773340 None:intergenic
GGAAGTAATGTTGAAGCAAA+TGG 0.432311 7_4:+8773530 Msa1138840:CDS
TAATTTCCTTTGCTAATTGA+GGG 0.432621 7_4:-8778302 None:intergenic
AGAGAATTTGAGAGATAGGA+AGG 0.437159 7_4:-8773276 None:intergenic
TATGAGAGTGATAGGAAGTT+AGG 0.437836 7_4:-8773332 None:intergenic
CCGGTACCCACCACACTATT+CGG 0.439159 7_4:+8779619 Msa1138840:CDS
GAAAGTAGTTTAGGAGAGGA+AGG 0.442110 7_4:-8773387 None:intergenic
CCTTCTATTCTTGGAAGCTC+CGG 0.443494 7_4:+8777136 Msa1138840:CDS
CCGGAGCTTCCAAGAATAGA+AGG 0.445742 7_4:-8777136 None:intergenic
GCTGCCCTAGGCTTGAATAG+TGG 0.447206 7_4:-8781994 None:intergenic
ATTCCCACGTTACAAGAATA+GGG 0.449776 7_4:+8778239 Msa1138840:CDS
ATGAAAACTTGTTAATGTAA+AGG 0.451809 7_4:-8777097 None:intergenic
TGAATGAAAATTTAGCATGT+AGG 0.455527 7_4:+8773219 Msa1138840:five_prime_UTR
GGTAGTATTTAATTGGGAAA+GGG 0.458707 7_4:+8782088 Msa1138840:three_prime_UTR
TTTCCTCATTTGTTATAAAG+AGG 0.459472 7_4:+8782340 Msa1138840:three_prime_UTR
AGACAACTATTATGATAACT+TGG 0.460871 7_4:+8779395 Msa1138840:CDS
AATTCCGACGGCAGCTCGTC+CGG 0.461016 7_4:+8779600 Msa1138840:CDS
TAGGAGAAGCCGACGCCGGC+CGG 0.463492 7_4:-8777155 None:intergenic
CCTACCAGTGCGGCGGTCGC+CGG 0.469988 7_4:-8777207 None:intergenic
TAACAAGTTAGAGGGGTTGG+TGG 0.470622 7_4:+8782247 Msa1138840:three_prime_UTR
GTGGGAATCTTTCTAGCCAC+TGG 0.471681 7_4:-8778224 None:intergenic
GCACTTCATGCTAACACAAC+AGG 0.472619 7_4:+8780378 Msa1138840:CDS
GGTTGTTCATCAGTGGCATA+TGG 0.473222 7_4:+8777026 Msa1138840:CDS
TTCCTCATTTGTTATAAAGA+GGG 0.474228 7_4:+8782341 Msa1138840:three_prime_UTR
GTCGGAAGACCGGTTGCTAT+AGG 0.477450 7_4:-8777174 None:intergenic
AATAGGGAACTTTATATCAC+TGG 0.485101 7_4:+8778255 Msa1138840:CDS
TAGCAAATTAACAAGTTAGA+GGG 0.485532 7_4:+8782239 Msa1138840:three_prime_UTR
GCTATCAATTCTCTATAAAG+TGG 0.486119 7_4:-8780590 None:intergenic
GGAATGATTTGAATAATTGA+AGG 0.486341 7_4:-8782017 None:intergenic
AGAAAGAATGAAAAGAAAGA+AGG 0.488097 7_4:+8782123 Msa1138840:three_prime_UTR
TATAGAGAATTGATAGCTCA+TGG 0.488532 7_4:+8780596 Msa1138840:CDS
TGCCCTTGCACAGCTTAAGT+TGG 0.489165 7_4:+8781124 Msa1138840:CDS
GGGTGGACAGAGGTGTATGA+AGG 0.490261 7_4:+8781931 Msa1138840:CDS
AAGTCCCACTATTCAAGCCT+AGG 0.491955 7_4:+8781989 Msa1138840:CDS
CTGCCCTAGGCTTGAATAGT+GGG 0.495262 7_4:-8781993 None:intergenic
AATTAACAAGTTAGAGGGGT+TGG 0.497370 7_4:+8782244 Msa1138840:three_prime_UTR
TCGGCTTCTCCTATAGCAAC+CGG 0.502197 7_4:+8777165 Msa1138840:CDS
TTGGAAGCTCCGGCCGGCGT+CGG 0.503233 7_4:+8777146 Msa1138840:CDS
ATCACTGGAGAGAGTTATGC+AGG 0.508887 7_4:+8778270 Msa1138840:CDS
TATGGAGCATCTGAAGAGAT+TGG 0.510180 7_4:+8777044 Msa1138840:CDS
CAACAGGCATTCCTTATAAG+TGG 0.512094 7_4:+8780394 Msa1138840:CDS
ACTTGGGCACAGTGACGTAC+TGG 0.513548 7_4:+8779412 Msa1138840:CDS
CCGAATAGTGTGGTGGGTAC+CGG 0.515210 7_4:-8779619 None:intergenic
ATAACAAGTGGTTTGTTGAG+AGG 0.518089 7_4:-8773689 None:intergenic
ATCTTTATATAGCTATGCTA+TGG 0.519588 7_4:+8779524 Msa1138840:CDS
AGGTAGTATTTAATTGGGAA+AGG 0.524196 7_4:+8782087 Msa1138840:three_prime_UTR
AATAATTGAAGGGCTGCCCT+AGG 0.524798 7_4:-8782006 None:intergenic
TAAAGAAAGTAGTTTAGGAG+AGG 0.525276 7_4:-8773391 None:intergenic
GGCGTGTCTGCCCTTTAGGA+AGG 0.527126 7_4:-8773311 None:intergenic
GACACCGGCGACCGCCGCAC+TGG 0.527738 7_4:+8777203 Msa1138840:CDS
TTGGAAGAGGCTTTCCTGCA+AGG 0.529066 7_4:-8782038 None:intergenic
GTAGTATTTAATTGGGAAAG+GGG 0.530498 7_4:+8782089 Msa1138840:three_prime_UTR
ATGGTGAAGAAGAGAAAGAT+AGG 0.530795 7_4:+8773549 Msa1138840:CDS
CTAACATTTGCCACAGTGAG+AGG 0.530811 7_4:+8781955 Msa1138840:CDS
CTGCCGTCGGAATTGTTACA+TGG 0.537209 7_4:-8779591 None:intergenic
TGTCCAGAAGGTCGGAAGAC+CGG 0.539364 7_4:-8777184 None:intergenic
CAAGCAACGCATCAATCTCA+AGG 0.539840 7_4:+8778344 Msa1138840:CDS
GGCGGTCGCCGGTGTCCAGA+AGG 0.540454 7_4:-8777196 None:intergenic
TTTGCCACAGTGAGAGGAGC+AGG 0.554915 7_4:+8781961 Msa1138840:CDS
AGCCCTCTTTATAACAAATG+AGG 0.557228 7_4:-8782343 None:intergenic
CTATTCTTGGAAGCTCCGGC+CGG 0.560883 7_4:+8777140 Msa1138840:CDS
ATTCATTGGATTCTTTCTGG+TGG 0.561680 7_4:-8779497 None:intergenic
ATTACTATTGTTCTGAACCA+AGG 0.563651 7_4:+8782196 Msa1138840:three_prime_UTR
AACAAAACTTTAGGTTGACC+AGG 0.563749 7_4:-8773584 None:intergenic
CTTGTTATTTGGCTTAATGG+AGG 0.570692 7_4:+8773704 Msa1138840:CDS
GTGTTTATTCTAAATTGTGA+AGG 0.572551 7_4:+8782285 Msa1138840:three_prime_UTR
GTATACCACATGAGGAAGGT+GGG 0.574762 7_4:-8779646 None:intergenic
GAATGATTTGAATAATTGAA+GGG 0.575307 7_4:-8782016 None:intergenic
GTCGCCGGTGTCCAGAAGGT+CGG 0.584830 7_4:-8777192 None:intergenic
AGCTTCCAAGAATAGAAGGT+TGG 0.585154 7_4:-8777132 None:intergenic
TATGCCACTGATGAACAACC+TGG 0.589196 7_4:-8777023 None:intergenic
GTTGCCCCACCTTCCTCATG+TGG 0.589592 7_4:+8779641 Msa1138840:CDS
TAGCCAACTTAAGCTGTGCA+AGG 0.592162 7_4:-8781127 None:intergenic
GTTCCCTATTCTTGTAACGT+GGG 0.593426 7_4:-8778242 None:intergenic
GGTGGACAGAGGTGTATGAA+GGG 0.594446 7_4:+8781932 Msa1138840:CDS
GACAACTATTATGATAACTT+GGG 0.595039 7_4:+8779396 Msa1138840:CDS
TAAAATAGGAAAACAAGAAG+AGG 0.595247 7_4:+8782067 Msa1138840:exon
AGCCAACTTAAGCTGTGCAA+GGG 0.595378 7_4:-8781126 None:intergenic
AGTTCCCTATTCTTGTAACG+TGG 0.599154 7_4:-8778243 None:intergenic
AGGTCCAGGTTGTTCATCAG+TGG 0.605278 7_4:+8777019 Msa1138840:intron
CTCTAGAATTTGTAATCCAG+TGG 0.608225 7_4:+8778208 Msa1138840:CDS
CCATTAAGCCAAATAACAAG+TGG 0.610141 7_4:-8773701 None:intergenic
AGTATACCACATGAGGAAGG+TGG 0.610618 7_4:-8779647 None:intergenic
TTGACATACCAAGGATACCA+TGG 0.612427 7_4:-8781158 None:intergenic
TATACCACATGAGGAAGGTG+GGG 0.612630 7_4:-8779645 None:intergenic
TAGTATTTAATTGGGAAAGG+GGG 0.615098 7_4:+8782090 Msa1138840:three_prime_UTR
AGTCCCACTATTCAAGCCTA+GGG 0.616101 7_4:+8781990 Msa1138840:CDS
GAAGGTTGGAGGGTGGACAG+AGG 0.618530 7_4:+8781921 Msa1138840:intron
AGCAAATTAACAAGTTAGAG+GGG 0.621648 7_4:+8782240 Msa1138840:three_prime_UTR
TTATGTCCCTCAATTAGCAA+AGG 0.626469 7_4:+8778296 Msa1138840:CDS
GCTATAGGAGAAGCCGACGC+CGG 0.627789 7_4:-8777159 None:intergenic
GGGGCAACCGAATAGTGTGG+TGG 0.632016 7_4:-8779626 None:intergenic
GGAAGTATACCACATGAGGA+AGG 0.632081 7_4:-8779650 None:intergenic
CATAGGAAGTATACCACATG+AGG 0.632795 7_4:-8779654 None:intergenic
GGTACCGGACGAGCTGCCGT+CGG 0.633669 7_4:-8779604 None:intergenic
TTTGATCAGATATCATAGCA+TGG 0.636106 7_4:-8779440 None:intergenic
CCTCCATGTAACAATTCCGA+CGG 0.638562 7_4:+8779588 Msa1138840:CDS
TGGGCACAGTGACGTACTGG+TGG 0.640565 7_4:+8779415 Msa1138840:CDS
AAGCAACGCATCAATCTCAA+GGG 0.643324 7_4:+8778345 Msa1138840:CDS
GGGCAACCGAATAGTGTGGT+GGG 0.651001 7_4:-8779625 None:intergenic
GGTGGGGCAACCGAATAGTG+TGG 0.652532 7_4:-8779629 None:intergenic
CAGTGGGGATGTAGACTCAG+TGG 0.664910 7_4:+8781079 Msa1138840:intron
ATGTCCTGCTCCTCTCACTG+TGG 0.675619 7_4:-8781965 None:intergenic
AGTTGGCTACTAAAATACCA+TGG 0.682245 7_4:+8781141 Msa1138840:CDS
GGTGGATCCTACCAGTGCGG+CGG 0.691805 7_4:-8777214 None:intergenic
TCTTCCGACCTTCTGGACAC+CGG 0.692338 7_4:+8777188 Msa1138840:CDS
CCGTCGGAATTGTTACATGG+AGG 0.692948 7_4:-8779588 None:intergenic
TGTGGTGGATCCTACCAGTG+CGG 0.722133 7_4:-8777217 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTTTAATTT+CGG + chr7_4:8780835-8780854 Msa1138840:intron 0.0%
!! TCAAATTACTAAAATAAATT+TGG - chr7_4:8773792-8773811 None:intergenic 10.0%
!!! TATTGATTATTTATTATTAG+TGG + chr7_4:8774068-8774087 Msa1138840:intron 10.0%
!! CAAATATAGAAAAAATTTAT+TGG - chr7_4:8775830-8775849 None:intergenic 10.0%
!! GTATAAACAAAAAATAATAT+TGG + chr7_4:8775955-8775974 Msa1138840:intron 10.0%
!!! ATTTTTTTTTTTTTTATAGG+AGG - chr7_4:8776304-8776323 None:intergenic 10.0%
!!! GAGATTTTTTTTTTTTTTAT+AGG - chr7_4:8776307-8776326 None:intergenic 10.0%
!!! TAAGTAAAATTGATTTTTAT+CGG - chr7_4:8777286-8777305 None:intergenic 10.0%
!!! TCAATTATATATTGATTAAT+TGG + chr7_4:8778029-8778048 Msa1138840:intron 10.0%
!!! CAATTATATATTGATTAATT+GGG + chr7_4:8778030-8778049 Msa1138840:intron 10.0%
!! AATTAAGACTATATATAATT+TGG - chr7_4:8778691-8778710 None:intergenic 10.0%
!!! AATTATATATAGTCTTAATT+TGG + chr7_4:8778691-8778710 Msa1138840:intron 10.0%
!!! AAAATAATAACATATTTCTA+GGG - chr7_4:8779073-8779092 None:intergenic 10.0%
!! AAAAATAATAACATATTTCT+AGG - chr7_4:8779074-8779093 None:intergenic 10.0%
!! ACTATTAATGATAAAATAAA+AGG - chr7_4:8779847-8779866 None:intergenic 10.0%
!! AGAATAAAAAAATATATGTT+GGG + chr7_4:8779950-8779969 Msa1138840:intron 10.0%
!!! TTCAATATTTTTGTTTTTTT+TGG - chr7_4:8780055-8780074 None:intergenic 10.0%
!! AAAAAAACAAAAATATTGAA+TGG + chr7_4:8780055-8780074 Msa1138840:intron 10.0%
!!! ATTTTGATTAATTTATCTAA+TGG + chr7_4:8780252-8780271 Msa1138840:intron 10.0%
!!! AAATATTTTTTGTTTTTCTT+AGG + chr7_4:8780275-8780294 Msa1138840:intron 10.0%
!!! AACTAGAAAAATTTAAAATT+AGG + chr7_4:8780770-8780789 Msa1138840:intron 10.0%
!! AAAAAAAAAGAAAAAAAGAA+AGG - chr7_4:8781895-8781914 None:intergenic 10.0%
!! TTAGTATATCTATACAAAAT+AGG + chr7_4:8773182-8773201 Msa1138840:five_prime_UTR 15.0%
!!! TTTTATAAAGAAAGTAGTTT+AGG - chr7_4:8773399-8773418 None:intergenic 15.0%
!! ATGAAAAATATGAAGAAAAT+TGG - chr7_4:8773428-8773447 None:intergenic 15.0%
!!! GTTTGTTAATAATTAACTTA+CGG - chr7_4:8774148-8774167 None:intergenic 15.0%
!!! AATTTTACTATATTTTGTTG+AGG + chr7_4:8774646-8774665 Msa1138840:intron 15.0%
!! TTTGTATCAAATTCTTAATT+TGG + chr7_4:8775049-8775068 Msa1138840:intron 15.0%
!!! ATTTAGAGTAAACTATTAAA+TGG - chr7_4:8775231-8775250 None:intergenic 15.0%
!! GTACAATAAATATATGTATA+GGG - chr7_4:8775892-8775911 None:intergenic 15.0%
!! TGTACAATAAATATATGTAT+AGG - chr7_4:8775893-8775912 None:intergenic 15.0%
!! ATGAAATAATAAATGAGTAA+GGG - chr7_4:8776544-8776563 None:intergenic 15.0%
!! AATGAAATAATAAATGAGTA+AGG - chr7_4:8776545-8776564 None:intergenic 15.0%
!!! TTGTTAGTTTATCAATAATA+CGG - chr7_4:8776603-8776622 None:intergenic 15.0%
!! ATTTAATGCTATTACTTTAA+GGG - chr7_4:8776758-8776777 None:intergenic 15.0%
!! TATTTAATGCTATTACTTTA+AGG - chr7_4:8776759-8776778 None:intergenic 15.0%
!!! TTTTTTCTTGTTAAGTTTAT+TGG + chr7_4:8777766-8777785 Msa1138840:intron 15.0%
!! TATATGAAAAAAATGAAGAA+AGG - chr7_4:8778115-8778134 None:intergenic 15.0%
!! TTTATATATAGATCAATCAA+TGG - chr7_4:8778408-8778427 None:intergenic 15.0%
!! TTGATTGATCTATATATAAA+TGG + chr7_4:8778408-8778427 Msa1138840:intron 15.0%
!! AACCAATTTATAATAAAGTA+AGG + chr7_4:8778781-8778800 Msa1138840:intron 15.0%
!! ACCAATTTATAATAAAGTAA+GGG + chr7_4:8778782-8778801 Msa1138840:intron 15.0%
!!! ATGTATGAAATTAGTTTAAA+AGG - chr7_4:8778816-8778835 None:intergenic 15.0%
!! CGTTAATAGAAATTATATAT+CGG - chr7_4:8779034-8779053 None:intergenic 15.0%
!!! GAATCTTTGTTATATAAATT+GGG + chr7_4:8779297-8779316 Msa1138840:intron 15.0%
!! TTTAATAAATAAATGTAGGT+TGG + chr7_4:8779360-8779379 Msa1138840:intron 15.0%
!! TTAATAAATAAATGTAGGTT+GGG + chr7_4:8779361-8779380 Msa1138840:intron 15.0%
!! CAGAATAAAAAAATATATGT+TGG + chr7_4:8779949-8779968 Msa1138840:intron 15.0%
!! TTGTAGTACTAATTAATATA+AGG - chr7_4:8780119-8780138 None:intergenic 15.0%
!! TATTAATTAGTACTACAATA+AGG + chr7_4:8780121-8780140 Msa1138840:intron 15.0%
!! ATTAATTAGTACTACAATAA+GGG + chr7_4:8780122-8780141 Msa1138840:intron 15.0%
!! GTATTTGTAAAGTAAAATAA+AGG - chr7_4:8780161-8780180 None:intergenic 15.0%
!!! AATAACAATCACTTTTTTAT+AGG - chr7_4:8781562-8781581 None:intergenic 15.0%
!!! ATTCTATAATTCAGTTTTTT+AGG + chr7_4:8781645-8781664 Msa1138840:intron 15.0%
!!! TTCTTTTTTTTTTTTTGTGA+AGG + chr7_4:8781903-8781922 Msa1138840:intron 15.0%
!!! TGTTCATGTAGTTATTTTTT+TGG + chr7_4:8773490-8773509 Msa1138840:CDS 20.0%
!! AATTGCTTAAACAAAACTTT+AGG - chr7_4:8773596-8773615 None:intergenic 20.0%
!! AAGAGAGAAATAAAAGAAAA+GGG - chr7_4:8773760-8773779 None:intergenic 20.0%
!! TAAGAGAGAAATAAAAGAAA+AGG - chr7_4:8773761-8773780 None:intergenic 20.0%
!! TGATAATACAAAATTTAGAC+AGG - chr7_4:8773877-8773896 None:intergenic 20.0%
!!! TTTACTATTTGTTTTGTTGA+AGG + chr7_4:8774388-8774407 Msa1138840:intron 20.0%
!! ATAGTAGTAACAATAGTAAA+AGG - chr7_4:8774422-8774441 None:intergenic 20.0%
!!! TTCTTCTTTTTAAGCAATTA+AGG + chr7_4:8774533-8774552 Msa1138840:intron 20.0%
!!! TCTTCTTTTTAAGCAATTAA+GGG + chr7_4:8774534-8774553 Msa1138840:intron 20.0%
!!! TATGTCATAAAACTTTTTAG+AGG + chr7_4:8774681-8774700 Msa1138840:intron 20.0%
!!! ATGTCATAAAACTTTTTAGA+GGG + chr7_4:8774682-8774701 Msa1138840:intron 20.0%
!! TAATGAAAAATTAAATTGGG+TGG + chr7_4:8774741-8774760 Msa1138840:intron 20.0%
!! CTTTGTAAATGATTTACTAA+CGG - chr7_4:8775141-8775160 None:intergenic 20.0%
!! TTTGTACCAAATTCTTAAAT+TGG - chr7_4:8775200-8775219 None:intergenic 20.0%
!! AAGCTGATTAATAATTAATG+TGG - chr7_4:8775408-8775427 None:intergenic 20.0%
!! TAATTATTAATCAGCTTCAT+AGG + chr7_4:8775411-8775430 Msa1138840:intron 20.0%
!! AATTATTAATCAGCTTCATA+GGG + chr7_4:8775412-8775431 Msa1138840:intron 20.0%
!! CATTTAATTGTACTTTGATT+TGG + chr7_4:8775562-8775581 Msa1138840:intron 20.0%
!!! AATCGGTTTTAAATATATAC+AGG + chr7_4:8775625-8775644 Msa1138840:intron 20.0%
!! TTGTTGTGTTACATATTTAA+TGG + chr7_4:8775658-8775677 Msa1138840:intron 20.0%
!!! TACATTTGTTGTACATTAAA+TGG + chr7_4:8775909-8775928 Msa1138840:intron 20.0%
!! TCAAATCAATAGTTGAATTA+GGG - chr7_4:8776026-8776045 None:intergenic 20.0%
!! TATGTGTAATTTCTTCAAAA+TGG - chr7_4:8776461-8776480 None:intergenic 20.0%
!! TTTCTTTCTCTACAATAAAT+AGG + chr7_4:8776571-8776590 Msa1138840:intron 20.0%
!! AACAAAATAATTCTCCAAAA+TGG + chr7_4:8776663-8776682 Msa1138840:intron 20.0%
!! TTGTTTAGTACTTTAACATA+TGG + chr7_4:8776718-8776737 Msa1138840:intron 20.0%
!!! ACAAAAAAAGTTTTGATTGA+TGG - chr7_4:8776817-8776836 None:intergenic 20.0%
!!! CTGTTTTGTTTAATCTAAAT+GGG - chr7_4:8777070-8777089 None:intergenic 20.0%
!!! ATGAAAACTTGTTAATGTAA+AGG - chr7_4:8777100-8777119 None:intergenic 20.0%
!!! TTTACATTAACAAGTTTTCA+TGG + chr7_4:8777099-8777118 Msa1138840:CDS 20.0%
!! TTATTATGTGACATAAACTT+TGG - chr7_4:8777540-8777559 None:intergenic 20.0%
!!! TTTTAAAAGACTTAAAACGA+GGG - chr7_4:8777854-8777873 None:intergenic 20.0%
!!! TATAGGGGAATAATTTTATA+GGG - chr7_4:8778069-8778088 None:intergenic 20.0%
!!! TTATAGGGGAATAATTTTAT+AGG - chr7_4:8778070-8778089 None:intergenic 20.0%
!! CATATTGTATGTAATTATAG+GGG - chr7_4:8778084-8778103 None:intergenic 20.0%
!! CCATATTGTATGTAATTATA+GGG - chr7_4:8778085-8778104 None:intergenic 20.0%
!! ACCATATTGTATGTAATTAT+AGG - chr7_4:8778086-8778105 None:intergenic 20.0%
!! ATACACAACATATTATTGTA+AGG + chr7_4:8778138-8778157 Msa1138840:intron 20.0%
!!! AGATTTATAGCTCAATATTT+TGG - chr7_4:8778547-8778566 None:intergenic 20.0%
!! TAAAAATGTGTCTTAGAATT+TGG + chr7_4:8778729-8778748 Msa1138840:intron 20.0%
!! TCCCTTACTTTATTATAAAT+TGG - chr7_4:8778786-8778805 None:intergenic 20.0%
!! CAATAAATTCTTGATATCAA+TGG - chr7_4:8778966-8778985 None:intergenic 20.0%
!! TATTATAGTCTATCAATTGA+GGG - chr7_4:8779130-8779149 None:intergenic 20.0%
!! ATATTATAGTCTATCAATTG+AGG - chr7_4:8779131-8779150 None:intergenic 20.0%
!! AAAAATGATATGCTACTATT+GGG + chr7_4:8779275-8779294 Msa1138840:intron 20.0%
!!! GGAATCTTTGTTATATAAAT+TGG + chr7_4:8779296-8779315 Msa1138840:intron 20.0%
!! GCAAAAATAAATAATGATGA+AGG + chr7_4:8779319-8779338 Msa1138840:intron 20.0%
!! ATATAAAGATTCACATTCAT+TGG - chr7_4:8779514-8779533 None:intergenic 20.0%
!! AATTCATCAAAGATATAGAA+TGG + chr7_4:8779911-8779930 Msa1138840:intron 20.0%
!!! TTGTTTTTTTTGGTAAATCA+AGG - chr7_4:8780045-8780064 None:intergenic 20.0%
!! AAAACAAAAATATTGAATGG+AGG + chr7_4:8780058-8780077 Msa1138840:intron 20.0%
!! GATGTCATACAAATAAATAA+AGG - chr7_4:8780094-8780113 None:intergenic 20.0%
!!! ATGTCACATAATTTTGTATA+AGG + chr7_4:8780217-8780236 Msa1138840:intron 20.0%
!! TATGCAAATTAAAGATTTGT+TGG + chr7_4:8780485-8780504 Msa1138840:intron 20.0%
!!! ACACTATAAAAGTTGAATTT+TGG - chr7_4:8780956-8780975 None:intergenic 20.0%
!! TTTAATTGCAAATTATCGTA+GGG - chr7_4:8781224-8781243 None:intergenic 20.0%
!!! TTTTAATTGCAAATTATCGT+AGG - chr7_4:8781225-8781244 None:intergenic 20.0%
!! ATGTCATTAAAACAATTGTT+TGG + chr7_4:8781383-8781402 Msa1138840:intron 20.0%
!! CAAGTTTATCAAAAATCTAT+TGG + chr7_4:8781687-8781706 Msa1138840:intron 20.0%
!!! ATTTTATCTGAAAATGAGTT+AGG + chr7_4:8781715-8781734 Msa1138840:intron 20.0%
!! TTTACATAAATCCTAGAATT+CGG - chr7_4:8781793-8781812 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTGAAGGT+TGG + chr7_4:8781907-8781926 Msa1138840:intron 20.0%
!! GAATGATTTGAATAATTGAA+GGG - chr7_4:8782019-8782038 None:intergenic 20.0%
!! AACAAGTGAAAAATTCTAAT+AGG + chr7_4:8782147-8782166 Msa1138840:three_prime_UTR 20.0%
!!! TAATTTGCTACAATGAAAAA+TGG - chr7_4:8782229-8782248 None:intergenic 20.0%
! TGAATGAAAATTTAGCATGT+AGG + chr7_4:8773219-8773238 Msa1138840:five_prime_UTR 25.0%
! ATGAGTGTCATAAACAATTT+GGG - chr7_4:8773252-8773271 None:intergenic 25.0%
! TATGAGTGTCATAAACAATT+TGG - chr7_4:8773253-8773272 None:intergenic 25.0%
!!! TTCATTTTAACCTAAAGTCA+TGG + chr7_4:8773448-8773467 Msa1138840:exon 25.0%
!!! TGTAGTTATTTTTTTGGTCA+TGG + chr7_4:8773496-8773515 Msa1138840:CDS 25.0%
!!! GTTTTGTTTAAGCAATTTTC+TGG + chr7_4:8773599-8773618 Msa1138840:CDS 25.0%
!!! ATTTTGTTGACTTGTTATGT+CGG - chr7_4:8774215-8774234 None:intergenic 25.0%
!! CTTTGAACTCTTTTCAATAT+TGG + chr7_4:8774251-8774270 Msa1138840:intron 25.0%
!!! AATCAAAGAAGTGTTATAGA+AGG - chr7_4:8774314-8774333 None:intergenic 25.0%
! GTAGCTTCTTTAAATCTATA+TGG + chr7_4:8774455-8774474 Msa1138840:intron 25.0%
!! TTACTCATGAATGACATTTT+TGG - chr7_4:8774510-8774529 None:intergenic 25.0%
! GGTAATTTAGCTAATAAAGT+TGG + chr7_4:8774555-8774574 Msa1138840:intron 25.0%
!!! TGTCATAAAACTTTTTAGAG+GGG + chr7_4:8774683-8774702 Msa1138840:intron 25.0%
! CATTACACCATTATTATTGA+AGG + chr7_4:8774711-8774730 Msa1138840:intron 25.0%
!! TTTTCCTCCTTCAATAATAA+TGG - chr7_4:8774721-8774740 None:intergenic 25.0%
! TTCATTCATTGTTACAAGTT+TGG - chr7_4:8774884-8774903 None:intergenic 25.0%
! AACTTGTAACAATGAATGAA+TGG + chr7_4:8774884-8774903 Msa1138840:intron 25.0%
! AAAGATAGAGATCAATTTGA+TGG - chr7_4:8775032-8775051 None:intergenic 25.0%
! TGATTAATAATTAATGTGGC+TGG - chr7_4:8775404-8775423 None:intergenic 25.0%
! TAAATATAGGGTTGCATTAA+TGG - chr7_4:8775499-8775518 None:intergenic 25.0%
! ATTAATGCAACCCTATATTT+AGG + chr7_4:8775498-8775517 Msa1138840:intron 25.0%
! TAAAAGAGGAAAGATAGAAT+AGG - chr7_4:8775591-8775610 None:intergenic 25.0%
! TTATACCGTATCGTTAAAAT+CGG + chr7_4:8775608-8775627 Msa1138840:intron 25.0%
!!! TAAAACCGATTTTAACGATA+CGG - chr7_4:8775616-8775635 None:intergenic 25.0%
! TGTTACATATTTAATGGCAA+TGG + chr7_4:8775664-8775683 Msa1138840:intron 25.0%
! CAATGGCAATATATACATAT+GGG + chr7_4:8775687-8775706 Msa1138840:intron 25.0%
!! TAGAGAATCTTTCTTCTTTT+AGG - chr7_4:8775751-8775770 None:intergenic 25.0%
! GAGATATAGCTAAACAAAAA+GGG - chr7_4:8775998-8776017 None:intergenic 25.0%
! CTCAAATCAATAGTTGAATT+AGG - chr7_4:8776027-8776046 None:intergenic 25.0%
! CGTTAAGGTAAAATAGATAT+AGG + chr7_4:8776118-8776137 Msa1138840:intron 25.0%
!!! TTTTTCAAATTGTCCTTTGT+AGG + chr7_4:8776368-8776387 Msa1138840:intron 25.0%
! ATTTAACAAAGTTCCTACAA+AGG - chr7_4:8776384-8776403 None:intergenic 25.0%
!! TTTGTTAAATGTGTCTTTTG+TGG + chr7_4:8776394-8776413 Msa1138840:intron 25.0%
! ACAACATTTATTTGATTCCT+TGG - chr7_4:8776484-8776503 None:intergenic 25.0%
! TCTCTACAATAAATAGGTAT+TGG + chr7_4:8776577-8776596 Msa1138840:intron 25.0%
!!! CAAAACTTTTTTTGTTGAAG+AGG + chr7_4:8776822-8776841 Msa1138840:intron 25.0%
! ATGCATCATTCATATAATGT+TGG - chr7_4:8776862-8776881 None:intergenic 25.0%
! TAGAAATGAAACAAATGAGT+AGG - chr7_4:8776931-8776950 None:intergenic 25.0%
! AAATCACAACACAGAATTAA+TGG - chr7_4:8776988-8777007 None:intergenic 25.0%
!! TTGTGATTTTGTGGATAATT+AGG + chr7_4:8776999-8777018 Msa1138840:intron 25.0%
!!! GCTGTTTTGTTTAATCTAAA+TGG - chr7_4:8777071-8777090 None:intergenic 25.0%
! AACTACTTGTAACACTATTA+TGG + chr7_4:8777441-8777460 Msa1138840:intron 25.0%
! ACTACTTGTAACACTATTAT+GGG + chr7_4:8777442-8777461 Msa1138840:intron 25.0%
! GTCAATTTGCAATTATGTTT+AGG - chr7_4:8777485-8777504 None:intergenic 25.0%
!! GCAAACAAAATTTTACTCTA+GGG - chr7_4:8777699-8777718 None:intergenic 25.0%
!! TGCAAACAAAATTTTACTCT+AGG - chr7_4:8777700-8777719 None:intergenic 25.0%
!!! GTTTTAAAAGACTTAAAACG+AGG - chr7_4:8777855-8777874 None:intergenic 25.0%
!!! GATTAATTGGGTTTTATTGT+TGG + chr7_4:8778042-8778061 Msa1138840:intron 25.0%
!! ATAGGGGAATAATTTTATAG+GGG - chr7_4:8778068-8778087 None:intergenic 25.0%
! CCCTATAATTACATACAATA+TGG + chr7_4:8778082-8778101 Msa1138840:intron 25.0%
! TAATTTCCTTTGCTAATTGA+GGG - chr7_4:8778305-8778324 None:intergenic 25.0%
! ATAATTTCCTTTGCTAATTG+AGG - chr7_4:8778306-8778325 None:intergenic 25.0%
! GATCAATCAATGGTAAAAAA+AGG - chr7_4:8778398-8778417 None:intergenic 25.0%
! GGAAATTGATTATGACAATT+AGG + chr7_4:8778429-8778448 Msa1138840:intron 25.0%
!!! TATTGTTAGTTTTTATGACG+AGG + chr7_4:8778605-8778624 Msa1138840:intron 25.0%
! TCTTGTTAAATCATCTTGTA+AGG + chr7_4:8779183-8779202 Msa1138840:intron 25.0%
! GAAAAATGATATGCTACTAT+TGG + chr7_4:8779274-8779293 Msa1138840:intron 25.0%
! AGACAACTATTATGATAACT+TGG + chr7_4:8779395-8779414 Msa1138840:CDS 25.0%
! GACAACTATTATGATAACTT+GGG + chr7_4:8779396-8779415 Msa1138840:CDS 25.0%
! ATCTTTATATAGCTATGCTA+TGG + chr7_4:8779524-8779543 Msa1138840:CDS 25.0%
!! AAGGATTTTGCAATAGAATT+AGG + chr7_4:8779792-8779811 Msa1138840:intron 25.0%
!!! TTTGTTTTTCTTAGGCTTTT+AGG + chr7_4:8780283-8780302 Msa1138840:intron 25.0%
!! CTTTGAAGATCATTTCAATT+AGG - chr7_4:8780715-8780734 None:intergenic 25.0%
!!! TTTTGGACCCATTTTTTTTT+TGG - chr7_4:8780939-8780958 None:intergenic 25.0%
! TTATGTTTGTGTTAATTCAG+TGG + chr7_4:8781062-8781081 Msa1138840:intron 25.0%
! TATGTTTGTGTTAATTCAGT+GGG + chr7_4:8781063-8781082 Msa1138840:intron 25.0%
! TTAATTGCAAATTATCGTAG+GGG - chr7_4:8781223-8781242 None:intergenic 25.0%
!!! ATTGTTTTAATGACATACGA+GGG - chr7_4:8781379-8781398 None:intergenic 25.0%
!!! AATTGTTTTAATGACATACG+AGG - chr7_4:8781380-8781399 None:intergenic 25.0%
!!! CTAAAAAAGTTTTAAGCAAG+AGG + chr7_4:8781515-8781534 Msa1138840:intron 25.0%
! GTTCTACATTGAATAAGTTA+AGG + chr7_4:8781589-8781608 Msa1138840:intron 25.0%
! TACATTGAATAAGTTAAGGT+TGG + chr7_4:8781593-8781612 Msa1138840:intron 25.0%
!! GATTTTTGATAAACTTGTGA+TGG - chr7_4:8781684-8781703 None:intergenic 25.0%
! GGAATGATTTGAATAATTGA+AGG - chr7_4:8782020-8782039 None:intergenic 25.0%
!!! TTTTCCTATTTTAGGACTTT+TGG - chr7_4:8782060-8782079 None:intergenic 25.0%
!!! TCTTCTTGTTTTCCTATTTT+AGG - chr7_4:8782068-8782087 None:intergenic 25.0%
! TAAAATAGGAAAACAAGAAG+AGG + chr7_4:8782067-8782086 Msa1138840:exon 25.0%
! AAGAAGAGGTAGTATTTAAT+TGG + chr7_4:8782081-8782100 Msa1138840:three_prime_UTR 25.0%
! AGAAGAGGTAGTATTTAATT+GGG + chr7_4:8782082-8782101 Msa1138840:three_prime_UTR 25.0%
! AGAAAGAATGAAAAGAAAGA+AGG + chr7_4:8782123-8782142 Msa1138840:three_prime_UTR 25.0%
! TAGCAAATTAACAAGTTAGA+GGG + chr7_4:8782239-8782258 Msa1138840:three_prime_UTR 25.0%
! GTGTTTATTCTAAATTGTGA+AGG + chr7_4:8782285-8782304 Msa1138840:three_prime_UTR 25.0%
!!! TTTCCTCATTTGTTATAAAG+AGG + chr7_4:8782340-8782359 Msa1138840:three_prime_UTR 25.0%
!!! TTCCTCATTTGTTATAAAGA+GGG + chr7_4:8782341-8782360 Msa1138840:three_prime_UTR 25.0%
TCCTATTTAATCCTTCCTAA+AGG + chr7_4:8773300-8773319 Msa1138840:five_prime_UTR 30.0%
CCTATTTAATCCTTCCTAAA+GGG + chr7_4:8773301-8773320 Msa1138840:five_prime_UTR 30.0%
TAGTTGTATATGAGAGTGAT+AGG - chr7_4:8773343-8773362 None:intergenic 30.0%
TAAAGAAAGTAGTTTAGGAG+AGG - chr7_4:8773394-8773413 None:intergenic 30.0%
TTTCTTTGATCCATGACTTT+AGG - chr7_4:8773461-8773480 None:intergenic 30.0%
!! TCAACAAACCACTTGTTATT+TGG + chr7_4:8773693-8773712 Msa1138840:CDS 30.0%
AGAAATAAAAGAAAAGGGAG+GGG - chr7_4:8773755-8773774 None:intergenic 30.0%
GAGAAATAAAAGAAAAGGGA+GGG - chr7_4:8773756-8773775 None:intergenic 30.0%
AGAGAAATAAAAGAAAAGGG+AGG - chr7_4:8773757-8773776 None:intergenic 30.0%
! TGGTATGATTTTTCCTCATT+TGG + chr7_4:8774088-8774107 Msa1138840:intron 30.0%
AAGGCTTAATATACCAAATG+AGG - chr7_4:8774104-8774123 None:intergenic 30.0%
CATAACAAGTCAACAAAATG+TGG + chr7_4:8774216-8774235 Msa1138840:intron 30.0%
AAATCAAAAACGTCTCATCA+AGG - chr7_4:8774286-8774305 None:intergenic 30.0%
! TATATTTTGTTGAGGACGAA+AGG + chr7_4:8774654-8774673 Msa1138840:intron 30.0%
! ATATTTTGTTGAGGACGAAA+GGG + chr7_4:8774655-8774674 Msa1138840:intron 30.0%
!! ATAAAACTTTTTAGAGGGGA+GGG + chr7_4:8774687-8774706 Msa1138840:intron 30.0%
TACACCATTATTATTGAAGG+AGG + chr7_4:8774714-8774733 Msa1138840:intron 30.0%
!! ACGAACACTTTCTTTTGTTT+TGG - chr7_4:8774810-8774829 None:intergenic 30.0%
GTAAATGATTTACTAACGGA+AGG - chr7_4:8775137-8775156 None:intergenic 30.0%
CAGAGACCAATTTAAGAATT+TGG + chr7_4:8775191-8775210 Msa1138840:intron 30.0%
TAATAGTGCACAAATGAGAT+AGG - chr7_4:8775318-8775337 None:intergenic 30.0%
AAAACCTCAACCTCAAATAA+TGG - chr7_4:8775438-8775457 None:intergenic 30.0%
TAGCTATGCTCCTAAATATA+GGG - chr7_4:8775511-8775530 None:intergenic 30.0%
TTAACGATACGGTATAAAAG+AGG - chr7_4:8775605-8775624 None:intergenic 30.0%
ATATTTAATGGCAATGGCAA+TGG + chr7_4:8775670-8775689 Msa1138840:intron 30.0%
GCAATGGCAATATATACATA+TGG + chr7_4:8775686-8775705 Msa1138840:intron 30.0%
TTTCTTAACATGTGTCCTAA+AGG - chr7_4:8775728-8775747 None:intergenic 30.0%
GTTTATACTAGTGCTAGTAT+AGG - chr7_4:8775943-8775962 None:intergenic 30.0%
GGAGATATAGCTAAACAAAA+AGG - chr7_4:8775999-8776018 None:intergenic 30.0%
CAATAGTTGAATTAGGGAAA+AGG - chr7_4:8776020-8776039 None:intergenic 30.0%
TTGTTAAATCATTCGATCGA+TGG + chr7_4:8776195-8776214 Msa1138840:intron 30.0%
!!! ATTGTATCTCGAGTTTTGTT+GGG - chr7_4:8776232-8776251 None:intergenic 30.0%
!! TATTGTATCTCGAGTTTTGT+TGG - chr7_4:8776233-8776252 None:intergenic 30.0%
TTTATAGGAGGTAGCAATTT+AGG - chr7_4:8776292-8776311 None:intergenic 30.0%
! AATGGACAAGTATTGTGAAA+CGG - chr7_4:8776681-8776700 None:intergenic 30.0%
TGAAGAAATTACACATACCA+AGG + chr7_4:8776464-8776483 Msa1138840:intron 30.0%
! TTCACAATACTTGTCCATTT+TGG - chr7_4:8776444-8776463 None:intergenic 30.0%
! AATGGACAAGTATTGTGAAA+CGG + chr7_4:8776681-8776700 Msa1138840:intron 30.0%
TACTTTAACATATGGTCCTA+AGG + chr7_4:8776726-8776745 Msa1138840:intron 30.0%
!!! AACTTTTTTTGTTGAAGAGG+AGG + chr7_4:8776825-8776844 Msa1138840:intron 30.0%
!!! ACTTTTTTTGTTGAAGAGGA+GGG + chr7_4:8776826-8776845 Msa1138840:intron 30.0%
! AATTCTGTGTTGTGATTTTG+TGG + chr7_4:8776990-8777009 Msa1138840:intron 30.0%
AGATTAAACAAAACAGCTTC+TGG + chr7_4:8777074-8777093 Msa1138840:CDS 30.0%
TGGTAGTAATTAGTGTGAAA+GGG - chr7_4:8777245-8777264 None:intergenic 30.0%
ATGGTAGTAATTAGTGTGAA+AGG - chr7_4:8777246-8777265 None:intergenic 30.0%
!!! TTTTATCGGTTTATGAACCA+TGG - chr7_4:8777272-8777291 None:intergenic 30.0%
!! AAGAAAAAAGAGTGTCTCAA+TGG + chr7_4:8777397-8777416 Msa1138840:intron 30.0%
AAATTGACAATTGACAACGA+TGG + chr7_4:8777497-8777516 Msa1138840:intron 30.0%
ACATCACTACCAAAGAAAAT+GGG + chr7_4:8777633-8777652 Msa1138840:intron 30.0%
! TGATCTTTTCCCATTTTCTT+TGG - chr7_4:8777645-8777664 None:intergenic 30.0%
! ACAAAAGTGCAACTTTAAGA+AGG - chr7_4:8777950-8777969 None:intergenic 30.0%
! GTTAACTTTTTATTCAGCCA+AGG + chr7_4:8778182-8778201 Msa1138840:intron 30.0%
AATAGGGAACTTTATATCAC+TGG + chr7_4:8778255-8778274 Msa1138840:CDS 30.0%
!! TTGCTTGGCTTTTATGTTAT+AGG - chr7_4:8778331-8778350 None:intergenic 30.0%
! TTTTCACTCATTCAGTGTAT+TGG + chr7_4:8778461-8778480 Msa1138840:intron 30.0%
AATGTGTCTTAGAATTTGGT+TGG + chr7_4:8778733-8778752 Msa1138840:intron 30.0%
!! ATGGGTGTTCTAAAAAAAGA+AGG + chr7_4:8778901-8778920 Msa1138840:intron 30.0%
TTTGATCAGATATCATAGCA+TGG - chr7_4:8779443-8779462 None:intergenic 30.0%
TATGCTATGGATCAAGAATT+TGG + chr7_4:8779537-8779556 Msa1138840:CDS 30.0%
CGACAAACATAACATAATAC+GGG - chr7_4:8779681-8779700 None:intergenic 30.0%
CCGACAAACATAACATAATA+CGG - chr7_4:8779682-8779701 None:intergenic 30.0%
CCGTATTATGTTATGTTTGT+CGG + chr7_4:8779679-8779698 Msa1138840:intron 30.0%
CGTATTATGTTATGTTTGTC+GGG + chr7_4:8779680-8779699 Msa1138840:intron 30.0%
!!! AAAGTTTTGGAACAAAGAGA+GGG - chr7_4:8779764-8779783 None:intergenic 30.0%
! CAAGGTATTTCTGCATATAA+CGG - chr7_4:8780027-8780046 None:intergenic 30.0%
! TCTGCATATTTTTCTGTACA+TGG - chr7_4:8780327-8780346 None:intergenic 30.0%
ATGCAGAAGTTTACTACAAT+AGG + chr7_4:8780340-8780359 Msa1138840:CDS 30.0%
!!! GTGAAGTTTTGAATAGAAAC+TGG + chr7_4:8780543-8780562 Msa1138840:intron 30.0%
GCTATCAATTCTCTATAAAG+TGG - chr7_4:8780593-8780612 None:intergenic 30.0%
! TATAGAGAATTGATAGCTCA+TGG + chr7_4:8780596-8780615 Msa1138840:CDS 30.0%
! AAGTTTTCTGATTACTTTGC+TGG + chr7_4:8780732-8780751 Msa1138840:intron 30.0%
TGACATGGCCAAAAAAAAAA+TGG + chr7_4:8780928-8780947 Msa1138840:intron 30.0%
GACATGGCCAAAAAAAAAAT+GGG + chr7_4:8780929-8780948 Msa1138840:intron 30.0%
!! TACCTTAACTTGCTAATCAA+TGG - chr7_4:8781008-8781027 None:intergenic 30.0%
ATGTTTGTGTTAATTCAGTG+GGG + chr7_4:8781064-8781083 Msa1138840:intron 30.0%
CAACCACTAATTGCTAAAAT+TGG - chr7_4:8781269-8781288 None:intergenic 30.0%
!! CAATTTTAGCAATTAGTGGT+TGG + chr7_4:8781267-8781286 Msa1138840:intron 30.0%
AGTATTTCTTCACTTTCGTT+TGG + chr7_4:8781293-8781312 Msa1138840:intron 30.0%
TTTAATGAGATGAAGATCTC+AGG - chr7_4:8781326-8781345 None:intergenic 30.0%
ATTAAACTCTTAGCTCAAAC+CGG + chr7_4:8781340-8781359 Msa1138840:intron 30.0%
TATGTCCTAAGTAGTTTACT+AGG + chr7_4:8781473-8781492 Msa1138840:intron 30.0%
ATGTCCTAAGTAGTTTACTA+GGG + chr7_4:8781474-8781493 Msa1138840:intron 30.0%
TTATCTGAAAATGAGTTAGG+AGG + chr7_4:8781718-8781737 Msa1138840:intron 30.0%
ATAAATCCTAGAATTCGGAT+TGG - chr7_4:8781788-8781807 None:intergenic 30.0%
!!! TTTTTTTTTGTGAAGGTTGG+AGG + chr7_4:8781910-8781929 Msa1138840:intron 30.0%
!!! TTTTTTTTGTGAAGGTTGGA+GGG + chr7_4:8781911-8781930 Msa1138840:intron 30.0%
TTATTCAAATCATTCCTTGC+AGG + chr7_4:8782024-8782043 Msa1138840:CDS 30.0%
!!! TATTTTAGGACTTTTGGAAG+AGG - chr7_4:8782054-8782073 None:intergenic 30.0%
TCTTCCAAAAGTCCTAAAAT+AGG + chr7_4:8782053-8782072 Msa1138840:CDS 30.0%
AGGTAGTATTTAATTGGGAA+AGG + chr7_4:8782087-8782106 Msa1138840:three_prime_UTR 30.0%
GGTAGTATTTAATTGGGAAA+GGG + chr7_4:8782088-8782107 Msa1138840:three_prime_UTR 30.0%
GTAGTATTTAATTGGGAAAG+GGG + chr7_4:8782089-8782108 Msa1138840:three_prime_UTR 30.0%
TAGTATTTAATTGGGAAAGG+GGG + chr7_4:8782090-8782109 Msa1138840:three_prime_UTR 30.0%
! ATTACTATTGTTCTGAACCA+AGG + chr7_4:8782196-8782215 Msa1138840:three_prime_UTR 30.0%
TGAAAAATGGCATAAAACCT+TGG - chr7_4:8782216-8782235 None:intergenic 30.0%
GTAGCAAATTAACAAGTTAG+AGG + chr7_4:8782238-8782257 Msa1138840:three_prime_UTR 30.0%
AGCAAATTAACAAGTTAGAG+GGG + chr7_4:8782240-8782259 Msa1138840:three_prime_UTR 30.0%
AGAGAATTTGAGAGATAGGA+AGG - chr7_4:8773279-8773298 None:intergenic 35.0%
! CCCTTTAGGAAGGATTAAAT+AGG - chr7_4:8773304-8773323 None:intergenic 35.0%
TATGAGAGTGATAGGAAGTT+AGG - chr7_4:8773335-8773354 None:intergenic 35.0%
!! TTGGTCATGGTTTTACTTAG+AGG + chr7_4:8773509-8773528 Msa1138840:CDS 35.0%
GGAAGTAATGTTGAAGCAAA+TGG + chr7_4:8773530-8773549 Msa1138840:CDS 35.0%
ATGGTGAAGAAGAGAAAGAT+AGG + chr7_4:8773549-8773568 Msa1138840:CDS 35.0%
!! AACAAAACTTTAGGTTGACC+AGG - chr7_4:8773587-8773606 None:intergenic 35.0%
GTTACTGTTAATCATGTTGC+TGG + chr7_4:8773626-8773645 Msa1138840:CDS 35.0%
!! ATAACAAGTGGTTTGTTGAG+AGG - chr7_4:8773692-8773711 None:intergenic 35.0%
CCATTAAGCCAAATAACAAG+TGG - chr7_4:8773704-8773723 None:intergenic 35.0%
!! CCACTTGTTATTTGGCTTAA+TGG + chr7_4:8773701-8773720 Msa1138840:CDS 35.0%
!! CTTGTTATTTGGCTTAATGG+AGG + chr7_4:8773704-8773723 Msa1138840:CDS 35.0%
GAAATAAAAGAAAAGGGAGG+GGG - chr7_4:8773754-8773773 None:intergenic 35.0%
ATGTTCCCTATGACAAGAAA+GGG - chr7_4:8773903-8773922 None:intergenic 35.0%
!! CATAAAACTTTTTAGAGGGG+AGG + chr7_4:8774686-8774705 Msa1138840:intron 35.0%
CTAGCTATGCTCCTAAATAT+AGG - chr7_4:8775512-8775531 None:intergenic 35.0%
! ATATTTAGGAGCATAGCTAG+TGG + chr7_4:8775512-8775531 Msa1138840:intron 35.0%
CATAGCTAGTGGCATTAAAA+TGG + chr7_4:8775523-8775542 Msa1138840:intron 35.0%
!! TAGTGTTAACTTGTGCCTTT+AGG + chr7_4:8775710-8775729 Msa1138840:intron 35.0%
!! AATCATTAACTTGTGCCTTG+AGG + chr7_4:8775850-8775869 Msa1138840:intron 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG + chr7_4:8775851-8775870 Msa1138840:intron 35.0%
TATAGCTAAACAAAAAGGGC+AGG - chr7_4:8775994-8776013 None:intergenic 35.0%
TAAATCATTCGATCGATGGA+TGG + chr7_4:8776199-8776218 Msa1138840:intron 35.0%
AAATCATTCGATCGATGGAT+GGG + chr7_4:8776200-8776219 Msa1138840:intron 35.0%
GGTGAATACTGTGTTATGAA+GGG - chr7_4:8776271-8776290 None:intergenic 35.0%
AGGTGAATACTGTGTTATGA+AGG - chr7_4:8776272-8776291 None:intergenic 35.0%
! TTTTGTGGATAATTAGGTCC+AGG + chr7_4:8777005-8777024 Msa1138840:intron 35.0%
CTAATTACTACCATCATCCA+TGG + chr7_4:8777252-8777271 Msa1138840:intron 35.0%
CTCGTTTACTATGTGTGTTT+GGG - chr7_4:8777347-8777366 None:intergenic 35.0%
ACTCGTTTACTATGTGTGTT+TGG - chr7_4:8777348-8777367 None:intergenic 35.0%
TGCTACAAGTACAATATGTG+TGG - chr7_4:8777610-8777629 None:intergenic 35.0%
CACATCACTACCAAAGAAAA+TGG + chr7_4:8777632-8777651 Msa1138840:intron 35.0%
TTGTTTGCATCCATTTGTCT+TGG + chr7_4:8777711-8777730 Msa1138840:intron 35.0%
TACTGAGAAACCAAGACAAA+TGG - chr7_4:8777724-8777743 None:intergenic 35.0%
GAAAAAATTCAAGTCGCACA+TGG + chr7_4:8777788-8777807 Msa1138840:intron 35.0%
! TACAAATTCTAGAGAGTCCT+TGG - chr7_4:8778202-8778221 None:intergenic 35.0%
!! CTCTAGAATTTGTAATCCAG+TGG + chr7_4:8778208-8778227 Msa1138840:CDS 35.0%
ATTCCCACGTTACAAGAATA+GGG + chr7_4:8778239-8778258 Msa1138840:CDS 35.0%
TTATGTCCCTCAATTAGCAA+AGG + chr7_4:8778296-8778315 Msa1138840:CDS 35.0%
CATCAATCTCAAGGGAATAA+TGG + chr7_4:8778353-8778372 Msa1138840:CDS 35.0%
ACACTGAATGAGTGAAAACA+AGG - chr7_4:8778459-8778478 None:intergenic 35.0%
!!! GTTAGTTTTTATGACGAGGA+TGG + chr7_4:8778609-8778628 Msa1138840:intron 35.0%
TGGTGCGACAATATAAATGA+TGG + chr7_4:8778882-8778901 Msa1138840:intron 35.0%
GGTGCGACAATATAAATGAT+GGG + chr7_4:8778883-8778902 Msa1138840:intron 35.0%
ATTCATTGGATTCTTTCTGG+TGG - chr7_4:8779500-8779519 None:intergenic 35.0%
CACATTCATTGGATTCTTTC+TGG - chr7_4:8779503-8779522 None:intergenic 35.0%
CATAACATAATACGGGACAT+AGG - chr7_4:8779674-8779693 None:intergenic 35.0%
!!! CAAAGTTTTGGAACAAAGAG+AGG - chr7_4:8779765-8779784 None:intergenic 35.0%
CTCTCTTTGTTCCAAAACTT+TGG + chr7_4:8779763-8779782 Msa1138840:intron 35.0%
! TCCAAAACTTTGGTAGTTGA+AGG + chr7_4:8779773-8779792 Msa1138840:intron 35.0%
! TCCTTCAACTACCAAAGTTT+TGG - chr7_4:8779777-8779796 None:intergenic 35.0%
! TTCTTAGGCTTTTAGGCAAA+TGG + chr7_4:8780290-8780309 Msa1138840:intron 35.0%
!! TGAAGTGCTTTTTGAACATC+TGG - chr7_4:8780366-8780385 None:intergenic 35.0%
! GAGTAAGAGTTTGGATTTTC+AGG + chr7_4:8780618-8780637 Msa1138840:CDS 35.0%
!!! AAGAGTTTGGATTTTCAGGT+TGG + chr7_4:8780622-8780641 Msa1138840:intron 35.0%
ACATCTGAATACCTCTACTT+AGG - chr7_4:8780897-8780916 None:intergenic 35.0%
!! AGAGGTATTCAGATGTTTGA+AGG + chr7_4:8780901-8780920 Msa1138840:intron 35.0%
ATGTTTGAAGGTCTTTGACA+TGG + chr7_4:8780913-8780932 Msa1138840:intron 35.0%
! CTCCATTGATTAGCAAGTTA+AGG + chr7_4:8781003-8781022 Msa1138840:intron 35.0%
AGTTGGCTACTAAAATACCA+TGG + chr7_4:8781141-8781160 Msa1138840:CDS 35.0%
CTAAAATACCATGGTATCCT+TGG + chr7_4:8781150-8781169 Msa1138840:CDS 35.0%
!! CGACCAATTTTAGCAATTAG+TGG + chr7_4:8781263-8781282 Msa1138840:intron 35.0%
! TGGAAACTTGATTTTGCTTG+TGG + chr7_4:8781403-8781422 Msa1138840:intron 35.0%
!! TTACTAGGGTGCTGAATTAA+AGG + chr7_4:8781488-8781507 Msa1138840:intron 35.0%
AATTAACAAGTTAGAGGGGT+TGG + chr7_4:8782244-8782263 Msa1138840:three_prime_UTR 35.0%
AGCCCTCTTTATAACAAATG+AGG - chr7_4:8782346-8782365 None:intergenic 35.0%
GGAGAGAGAATTTGAGAGAT+AGG - chr7_4:8773283-8773302 None:intergenic 40.0%
GAAAGTAGTTTAGGAGAGGA+AGG - chr7_4:8773390-8773409 None:intergenic 40.0%
! CTGGTAGAGCTCTCTTTTAT+TGG + chr7_4:8773645-8773664 Msa1138840:CDS 40.0%
TCAAGTCCCTTTCTTGTCAT+AGG + chr7_4:8773894-8773913 Msa1138840:intron 40.0%
CAAGTCCCTTTCTTGTCATA+GGG + chr7_4:8773895-8773914 Msa1138840:intron 40.0%
CATGTTCCCTATGACAAGAA+AGG - chr7_4:8773904-8773923 None:intergenic 40.0%
TTCAAGCTATCCATTGCCAA+TGG - chr7_4:8774854-8774873 None:intergenic 40.0%
CAATGATCGAAGCAGATTTG+TGG + chr7_4:8775281-8775300 Msa1138840:intron 40.0%
CTTCATAGGGCCATTATTTG+AGG + chr7_4:8775425-8775444 Msa1138840:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr7_4:8775868-8775887 None:intergenic 40.0%
AGAGAGAGAGAGAGAGAATA+TGG + chr7_4:8776083-8776102 Msa1138840:intron 40.0%
TGGATGAATGACTCTCGTTA+AGG + chr7_4:8776103-8776122 Msa1138840:intron 40.0%
! GACAAGTATTGTGAAACGGA+GGG - chr7_4:8776685-8776704 None:intergenic 40.0%
! GACAAGTATTGTGAAACGGA+GGG + chr7_4:8776685-8776704 Msa1138840:intron 40.0%
! ACTTTAAGGGATGTGTCCTT+AGG - chr7_4:8776745-8776764 None:intergenic 40.0%
! TATGGAGCATCTGAAGAGAT+TGG + chr7_4:8777044-8777063 Msa1138840:CDS 40.0%
! CAAGTTTTCATGGAACACAG+TGG + chr7_4:8777109-8777128 Msa1138840:CDS 40.0%
AGCTTCCAAGAATAGAAGGT+TGG - chr7_4:8777135-8777154 None:intergenic 40.0%
AATTAGTGTGAAAGGGAGTG+TGG - chr7_4:8777238-8777257 None:intergenic 40.0%
GGTTTATGAACCATGGATGA+TGG - chr7_4:8777265-8777284 None:intergenic 40.0%
! ACTATGTGTGTTTGGGTTTG+CGG - chr7_4:8777340-8777359 None:intergenic 40.0%
!! AAAGAGTGTCTCAATGGACT+AGG + chr7_4:8777403-8777422 Msa1138840:intron 40.0%
ACAACGATGGACCATTTCTT+TGG + chr7_4:8777510-8777529 Msa1138840:intron 40.0%
ACTTTGGACCACCAAAGAAA+TGG - chr7_4:8777524-8777543 None:intergenic 40.0%
TGCAGGAACATCACTAGTAT+GGG - chr7_4:8777575-8777594 None:intergenic 40.0%
TTGCAGGAACATCACTAGTA+TGG - chr7_4:8777576-8777595 None:intergenic 40.0%
GATTCCCACGTTACAAGAAT+AGG + chr7_4:8778238-8778257 Msa1138840:CDS 40.0%
GTTCCCTATTCTTGTAACGT+GGG - chr7_4:8778245-8778264 None:intergenic 40.0%
AGTTCCCTATTCTTGTAACG+TGG - chr7_4:8778246-8778265 None:intergenic 40.0%
AAGCAACGCATCAATCTCAA+GGG + chr7_4:8778345-8778364 Msa1138840:CDS 40.0%
! CATAGGAAGTATACCACATG+AGG - chr7_4:8779657-8779676 None:intergenic 40.0%
CAACAGGCATTCCTTATAAG+TGG + chr7_4:8780394-8780413 Msa1138840:CDS 40.0%
TAGCTCATGGAGTAAGAGTT+TGG + chr7_4:8780609-8780628 Msa1138840:CDS 40.0%
GCATATCTTGTTGCTGTAAC+TGG - chr7_4:8781107-8781126 None:intergenic 40.0%
TTGACATACCAAGGATACCA+TGG - chr7_4:8781161-8781180 None:intergenic 40.0%
TCCTTGGTATGTCAAAAAGC+AGG + chr7_4:8781166-8781185 Msa1138840:CDS 40.0%
!!! ACCTGCTTTTTGACATACCA+AGG - chr7_4:8781170-8781189 None:intergenic 40.0%
CAAATTATCGTAGGGGTCAA+GGG - chr7_4:8781216-8781235 None:intergenic 40.0%
AGATAGTGTAGCACATGATG+TGG + chr7_4:8781433-8781452 Msa1138840:intron 40.0%
AGCACCCTAGTAAACTACTT+AGG - chr7_4:8781481-8781500 None:intergenic 40.0%
!! CTCTACAGGCTGATTTTGTA+CGG + chr7_4:8781750-8781769 Msa1138840:intron 40.0%
!! GATTTTGTACGGATCGACTT+AGG + chr7_4:8781761-8781780 Msa1138840:intron 40.0%
TTAGGTCCAATCCGAATTCT+AGG + chr7_4:8781779-8781798 Msa1138840:intron 40.0%
AATTGGGAAAGGGGGAAAAA+AGG + chr7_4:8782098-8782117 Msa1138840:three_prime_UTR 40.0%
GATAGGATCTTCAAGCTTCC+TGG + chr7_4:8773566-8773585 Msa1138840:CDS 45.0%
CAATGGCAACCAACTCATGT+GGG - chr7_4:8774837-8774856 None:intergenic 45.0%
TTGCCCTACATATACACGCA+TGG + chr7_4:8775348-8775367 Msa1138840:intron 45.0%
GTGCCATGCGTGTATATGTA+GGG - chr7_4:8775354-8775373 None:intergenic 45.0%
AGTGCCATGCGTGTATATGT+AGG - chr7_4:8775355-8775374 None:intergenic 45.0%
! AGGGCCATTATTTGAGGTTG+AGG + chr7_4:8775431-8775450 Msa1138840:intron 45.0%
TGTCAGCTACTAGCATGCAT+TGG + chr7_4:8775469-8775488 Msa1138840:intron 45.0%
AAAAGGGCAGGAGATGAGTA+GGG - chr7_4:8775982-8776001 None:intergenic 45.0%
AAAAAGGGCAGGAGATGAGT+AGG - chr7_4:8775983-8776002 None:intergenic 45.0%
! GGACAAGTATTGTGAAACGG+AGG - chr7_4:8776684-8776703 None:intergenic 45.0%
! GGACAAGTATTGTGAAACGG+AGG + chr7_4:8776684-8776703 Msa1138840:intron 45.0%
TATGCCACTGATGAACAACC+TGG - chr7_4:8777026-8777045 None:intergenic 45.0%
GGTTGTTCATCAGTGGCATA+TGG + chr7_4:8777026-8777045 Msa1138840:CDS 45.0%
AGTGGCCAACCTTCTATTCT+TGG + chr7_4:8777127-8777146 Msa1138840:CDS 45.0%
CCTTCTATTCTTGGAAGCTC+CGG + chr7_4:8777136-8777155 Msa1138840:CDS 45.0%
ACGATGGACCATTTCTTTGG+TGG + chr7_4:8777513-8777532 Msa1138840:intron 45.0%
CACATGGAAAAGAGCAAGGT+CGG + chr7_4:8777804-8777823 Msa1138840:intron 45.0%
ATCACTGGAGAGAGTTATGC+AGG + chr7_4:8778270-8778289 Msa1138840:CDS 45.0%
CTTGAGATTGATGCGTTGCT+TGG - chr7_4:8778346-8778365 None:intergenic 45.0%
CAAGCAACGCATCAATCTCA+AGG + chr7_4:8778344-8778363 Msa1138840:CDS 45.0%
TCGTGCAACACTACTGAGTT+TGG + chr7_4:8778862-8778881 Msa1138840:intron 45.0%
!! TATTTCTAGGGCACGCGTTA+AGG - chr7_4:8779061-8779080 None:intergenic 45.0%
CCTCCATGTAACAATTCCGA+CGG + chr7_4:8779588-8779607 Msa1138840:CDS 45.0%
TATACCACATGAGGAAGGTG+GGG - chr7_4:8779648-8779667 None:intergenic 45.0%
GTATACCACATGAGGAAGGT+GGG - chr7_4:8779649-8779668 None:intergenic 45.0%
AGTATACCACATGAGGAAGG+TGG - chr7_4:8779650-8779669 None:intergenic 45.0%
! GGAAGTATACCACATGAGGA+AGG - chr7_4:8779653-8779672 None:intergenic 45.0%
TAGAATGGAGCGACATGACA+AGG + chr7_4:8779926-8779945 Msa1138840:intron 45.0%
! TAGGCTTTTAGGCAAATGGC+TGG + chr7_4:8780294-8780313 Msa1138840:intron 45.0%
GCACTTCATGCTAACACAAC+AGG + chr7_4:8780378-8780397 Msa1138840:CDS 45.0%
CTGCAAGCAGTCCACTTATA+AGG - chr7_4:8780408-8780427 None:intergenic 45.0%
!! CTTATAAGTGGACTGCTTGC+AGG + chr7_4:8780406-8780425 Msa1138840:CDS 45.0%
GTTACCAAGCTCGGCAATTT+CGG - chr7_4:8780862-8780881 None:intergenic 45.0%
GAAATTGCCGAGCTTGGTAA+CGG + chr7_4:8780861-8780880 Msa1138840:intron 45.0%
GAAGCTTGTGACCTAAGTAG+AGG + chr7_4:8780883-8780902 Msa1138840:intron 45.0%
AGCCAACTTAAGCTGTGCAA+GGG - chr7_4:8781129-8781148 None:intergenic 45.0%
TAGCCAACTTAAGCTGTGCA+AGG - chr7_4:8781130-8781149 None:intergenic 45.0%
GCAAATTATCGTAGGGGTCA+AGG - chr7_4:8781217-8781236 None:intergenic 45.0%
CGAGGGTTGAATAACTCAAC+CGG - chr7_4:8781362-8781381 None:intergenic 45.0%
AAAATCAGCCTGTAGAGCGA+GGG - chr7_4:8781747-8781766 None:intergenic 45.0%
! TTTTTGTGAAGGTTGGAGGG+TGG + chr7_4:8781914-8781933 Msa1138840:intron 45.0%
CTAACATTTGCCACAGTGAG+AGG + chr7_4:8781955-8781974 Msa1138840:CDS 45.0%
AAGTCCCACTATTCAAGCCT+AGG + chr7_4:8781989-8782008 Msa1138840:CDS 45.0%
AGTCCCACTATTCAAGCCTA+GGG + chr7_4:8781990-8782009 Msa1138840:CDS 45.0%
AATAATTGAAGGGCTGCCCT+AGG - chr7_4:8782009-8782028 None:intergenic 45.0%
TAACAAGTTAGAGGGGTTGG+TGG + chr7_4:8782247-8782266 Msa1138840:three_prime_UTR 45.0%
!! ATATATTAAAAAAAAAATCA+AGG - chr7_4:8774123-8774142 None:intergenic 5.0%
!! AAAATAATGAAAAATTAAAT+TGG + chr7_4:8774737-8774756 Msa1138840:intron 5.0%
!! AAATAATGAAAAATTAAATT+GGG + chr7_4:8774738-8774757 Msa1138840:intron 5.0%
!! ATAAAATAAAATATAAATGA+TGG + chr7_4:8779100-8779119 Msa1138840:intron 5.0%
!! TAAAATAAAATATAAATGAT+GGG + chr7_4:8779101-8779120 Msa1138840:intron 5.0%
!! TTATTTATTAAATTAACATA+AGG - chr7_4:8779352-8779371 None:intergenic 5.0%
!! TTAATTTAATAAATAAATGT+AGG + chr7_4:8779356-8779375 Msa1138840:intron 5.0%
TTCGTAGAGCCCACATGAGT+TGG + chr7_4:8774825-8774844 Msa1138840:intron 50.0%
CCAATGGCAACCAACTCATG+TGG - chr7_4:8774838-8774857 None:intergenic 50.0%
!! CCACATGAGTTGGTTGCCAT+TGG + chr7_4:8774835-8774854 Msa1138840:intron 50.0%
! GAGTTGGTTGCCATTGGCAA+TGG + chr7_4:8774841-8774860 Msa1138840:intron 50.0%
AGGTCCAGGTTGTTCATCAG+TGG + chr7_4:8777019-8777038 Msa1138840:intron 50.0%
CCGGAGCTTCCAAGAATAGA+AGG - chr7_4:8777139-8777158 None:intergenic 50.0%
TCGGCTTCTCCTATAGCAAC+CGG + chr7_4:8777165-8777184 Msa1138840:CDS 50.0%
! TAGTGTGAAAGGGAGTGTGG+TGG - chr7_4:8777235-8777254 None:intergenic 50.0%
! ATGTGTGTTTGGGTTTGCGG+TGG - chr7_4:8777337-8777356 None:intergenic 50.0%
GTCGCACATGGAAAAGAGCA+AGG + chr7_4:8777800-8777819 Msa1138840:intron 50.0%
! GCAAGGTCGGCTCAAAGATA+AGG + chr7_4:8777817-8777836 Msa1138840:intron 50.0%
! GTGGGAATCTTTCTAGCCAC+TGG - chr7_4:8778227-8778246 None:intergenic 50.0%
CCGTCGGAATTGTTACATGG+AGG - chr7_4:8779591-8779610 None:intergenic 50.0%
CTGCCGTCGGAATTGTTACA+TGG - chr7_4:8779594-8779613 None:intergenic 50.0%
CAAGCTTCCGTTACCAAGCT+CGG - chr7_4:8780871-8780890 None:intergenic 50.0%
TGCCCTTGCACAGCTTAAGT+TGG + chr7_4:8781124-8781143 Msa1138840:CDS 50.0%
CAAAATCAGCCTGTAGAGCG+AGG - chr7_4:8781748-8781767 None:intergenic 50.0%
! GGTGGACAGAGGTGTATGAA+GGG + chr7_4:8781932-8781951 Msa1138840:CDS 50.0%
CTGCCCTAGGCTTGAATAGT+GGG - chr7_4:8781996-8782015 None:intergenic 50.0%
TTGGAAGAGGCTTTCCTGCA+AGG - chr7_4:8782041-8782060 None:intergenic 50.0%
GTTAGGCGTGTCTGCCCTTT+AGG - chr7_4:8773318-8773337 None:intergenic 55.0%
CTATTCTTGGAAGCTCCGGC+CGG + chr7_4:8777140-8777159 Msa1138840:CDS 55.0%
GTCGGAAGACCGGTTGCTAT+AGG - chr7_4:8777177-8777196 None:intergenic 55.0%
TGTCCAGAAGGTCGGAAGAC+CGG - chr7_4:8777187-8777206 None:intergenic 55.0%
TCTTCCGACCTTCTGGACAC+CGG + chr7_4:8777188-8777207 Msa1138840:CDS 55.0%
!! TGTGGTGGATCCTACCAGTG+CGG - chr7_4:8777220-8777239 None:intergenic 55.0%
TGTGGCTAGTGTGCACTTGC+AGG - chr7_4:8777592-8777611 None:intergenic 55.0%
ACTTGGGCACAGTGACGTAC+TGG + chr7_4:8779412-8779431 Msa1138840:CDS 55.0%
!! CCGAATAGTGTGGTGGGTAC+CGG - chr7_4:8779622-8779641 None:intergenic 55.0%
CCGGTACCCACCACACTATT+CGG + chr7_4:8779619-8779638 Msa1138840:CDS 55.0%
GGGCAACCGAATAGTGTGGT+GGG - chr7_4:8779628-8779647 None:intergenic 55.0%
CAGTGGGGATGTAGACTCAG+TGG + chr7_4:8781079-8781098 Msa1138840:intron 55.0%
! GGGTGGACAGAGGTGTATGA+AGG + chr7_4:8781931-8781950 Msa1138840:CDS 55.0%
TTTGCCACAGTGAGAGGAGC+AGG + chr7_4:8781961-8781980 Msa1138840:CDS 55.0%
ATGTCCTGCTCCTCTCACTG+TGG - chr7_4:8781968-8781987 None:intergenic 55.0%
GCTGCCCTAGGCTTGAATAG+TGG - chr7_4:8781997-8782016 None:intergenic 55.0%
! GGCGTGTCTGCCCTTTAGGA+AGG - chr7_4:8773314-8773333 None:intergenic 60.0%
GCTATAGGAGAAGCCGACGC+CGG - chr7_4:8777162-8777181 None:intergenic 60.0%
CAACCGGTCTTCCGACCTTC+TGG + chr7_4:8777181-8777200 Msa1138840:CDS 60.0%
TGGGCACAGTGACGTACTGG+TGG + chr7_4:8779415-8779434 Msa1138840:CDS 60.0%
AATTCCGACGGCAGCTCGTC+CGG + chr7_4:8779600-8779619 Msa1138840:CDS 60.0%
GGGGCAACCGAATAGTGTGG+TGG - chr7_4:8779629-8779648 None:intergenic 60.0%
GGTGGGGCAACCGAATAGTG+TGG - chr7_4:8779632-8779651 None:intergenic 60.0%
GTTGCCCCACCTTCCTCATG+TGG + chr7_4:8779641-8779660 Msa1138840:CDS 60.0%
CGGTCCGAAATTGCCGAGCT+TGG + chr7_4:8780855-8780874 Msa1138840:intron 60.0%
GAAGGTTGGAGGGTGGACAG+AGG + chr7_4:8781921-8781940 Msa1138840:intron 60.0%
GTCGCCGGTGTCCAGAAGGT+CGG - chr7_4:8777195-8777214 None:intergenic 65.0%
GGTGGATCCTACCAGTGCGG+CGG - chr7_4:8777217-8777236 None:intergenic 65.0%
!! GGAGGCATCCCTCGCTCTAC+AGG + chr7_4:8781736-8781755 Msa1138840:intron 65.0%
TTGGAAGCTCCGGCCGGCGT+CGG + chr7_4:8777146-8777165 Msa1138840:CDS 70.0%
TAGGAGAAGCCGACGCCGGC+CGG - chr7_4:8777158-8777177 None:intergenic 70.0%
! GGTACCGGACGAGCTGCCGT+CGG - chr7_4:8779607-8779626 None:intergenic 70.0%
GGCGGTCGCCGGTGTCCAGA+AGG - chr7_4:8777199-8777218 None:intergenic 75.0%
CCTACCAGTGCGGCGGTCGC+CGG - chr7_4:8777210-8777229 None:intergenic 75.0%
! GACACCGGCGACCGCCGCAC+TGG + chr7_4:8777203-8777222 Msa1138840:CDS 80.0%
!! CCGGCGACCGCCGCACTGGT+AGG + chr7_4:8777207-8777226 Msa1138840:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 8773178 8782391 8773178 ID=Msa1138840;Name=Msa1138840
chr7_4 mRNA 8773178 8782391 8773178 ID=Msa1138840-mRNA-1;Parent=Msa1138840;Name=Msa1138840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=289|1|1|1|1|1|8|317|468
chr7_4 exon 8773178 8773725 8773178 ID=Msa1138840-mRNA-1:exon:2312;Parent=Msa1138840-mRNA-1
chr7_4 exon 8777021 8777224 8777021 ID=Msa1138840-mRNA-1:exon:2313;Parent=Msa1138840-mRNA-1
chr7_4 exon 8778199 8778374 8778199 ID=Msa1138840-mRNA-1:exon:2314;Parent=Msa1138840-mRNA-1
chr7_4 exon 8779378 8779662 8779378 ID=Msa1138840-mRNA-1:exon:2315;Parent=Msa1138840-mRNA-1
chr7_4 exon 8780297 8780427 8780297 ID=Msa1138840-mRNA-1:exon:2316;Parent=Msa1138840-mRNA-1
chr7_4 exon 8780544 8780639 8780544 ID=Msa1138840-mRNA-1:exon:2317;Parent=Msa1138840-mRNA-1
chr7_4 exon 8781082 8781187 8781082 ID=Msa1138840-mRNA-1:exon:2318;Parent=Msa1138840-mRNA-1
chr7_4 exon 8781925 8782391 8781925 ID=Msa1138840-mRNA-1:exon:2319;Parent=Msa1138840-mRNA-1
chr7_4 five_prime_UTR 8773178 8773466 8773178 ID=Msa1138840-mRNA-1:five_prime_utr;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8773467 8773725 8773467 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8777021 8777224 8777021 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8778199 8778374 8778199 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8779378 8779662 8779378 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8780297 8780427 8780297 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8780544 8780639 8780544 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8781082 8781187 8781082 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 CDS 8781925 8782074 8781925 ID=Msa1138840-mRNA-1:cds;Parent=Msa1138840-mRNA-1
chr7_4 three_prime_UTR 8782075 8782391 8782075 ID=Msa1138840-mRNA-1:three_prime_utr;Parent=Msa1138840-mRNA-1
Gene Sequence

>Msa1138840

ATGGATCAAAGAAAAAATATCTTTGTTCATGTAGTTATTTTTTTGGTCATGGTTTTACTTAGAGGAAGTAATGTTGAAGCAAATGGTGAAGAAGAGAAAGATAGGATCTTCAAGCTTCCTGGTCAACCTAAAGTTTTGTTTAAGCAATTTTCTGGCTATGTTACTGTTAATCATGTTGCTGGTAGAGCTCTCTTTTATTGGTTAACTGAAGCTGAACAAAATCCTCTCAACAAACCACTTGTTATTTGGCTTAATGGAGGTCCAGGTTGTTCATCAGTGGCATATGGAGCATCTGAAGAGATTGGCCCATTTAGATTAAACAAAACAGCTTCTGGCCTTTACATTAACAAGTTTTCATGGAACACAGTGGCCAACCTTCTATTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTATAGCAACCGGTCTTCCGACCTTCTGGACACCGGCGACCGCCGCACTGCCAAGGACTCTCTAGAATTTGTAATCCAGTGGCTAGAAAGATTCCCACGTTACAAGAATAGGGAACTTTATATCACTGGAGAGAGTTATGCAGGACATTATGTCCCTCAATTAGCAAAGGAAATTATGACCTATAACATAAAAGCCAAGCAACGCATCAATCTCAAGGGAATAATGGTTGGGAATGCAGTGACAGACAACTATTATGATAACTTGGGCACAGTGACGTACTGGTGGAGCCATGCTATGATATCTGATCAAACATACAAACAACTCATTAGTACATGTGATTTTCACCACCAGAAAGAATCCAATGAATGTGAATCTTTATATAGCTATGCTATGGATCAAGAATTTGGTAACATTGATCAGTATAATATCTATGCTCCTCCATGTAACAATTCCGACGGCAGCTCGTCCGGTACCCACCACACTATTCGGTTGCCCCACCTTCCTCATGTGGCTTTTAGGCAAATGGCTGGTTATGATCCATGTACAGAAAAATATGCAGAAGTTTACTACAATAGGCCAGATGTTCAAAAAGCACTTCATGCTAACACAACAGGCATTCCTTATAAGTGGACTGCTTGCAGTGAAGTTTTGAATAGAAACTGGAATGATACAGATGTCTCTGTTCTTCCACTTTATAGAGAATTGATAGCTCATGGAGTAAGAGTTTGGATTTTCAGTGGGGATGTAGACTCAGTGGTTCCAGTTACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGGCTACTAAAATACCATGGTATCCTTGGTATGTCAAAAAGCAGGTTGGAGGGTGGACAGAGGTGTATGAAGGGCTAACATTTGCCACAGTGAGAGGAGCAGGACATGAAGTCCCACTATTCAAGCCTAGGGCAGCCCTTCAATTATTCAAATCATTCCTTGCAGGAAAGCCTCTTCCAAAAGTCCTAAAATAG
Protein sequence

>Msa1138840

MDQRKNIFVHVVIFLVMVLLRGSNVEANGEEEKDRIFKLPGQPKVLFKQFSGYVTVNHVAGRALFYWLTEAEQNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRLNKTASGLYINKFSWNTVANLLFLEAPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNIKAKQRINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYKQLISTCDFHHQKESNECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSGTHHTIRLPHLPHVAFRQMAGYDPCTEKYAEVYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPLYRELIAHGVRVWIFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKVLK*