AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212070 MtrunA17_Chr4g0060791 99.134 462 4 0 36 497 1 462 0.0 947
Msa1212070 MtrunA17_Chr5g0440511 62.108 446 159 5 54 495 9 448 0.0 564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212070 AT1G74470.1 82.796 465 76 2 37 497 3 467 0.0 772

Find 187 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCGGTGGGTGGTGGGTTT+AGG 0.134931 8_1:+71923006 None:intergenic
TGAATATGCTATTGCATTTC+AGG 0.142330 8_1:-71922416 Msa1212070:intron
CTTCGTGGCCTTGGATGTTC+TGG 0.162681 8_1:+71921551 None:intergenic
AGGGGATTTGAGGAAATATT+TGG 0.198675 8_1:-71921378 Msa1212070:CDS
TAGGAGAATTGAGGGGTTTC+TGG 0.199696 8_1:+71923033 None:intergenic
CTCCAATCACCAGTCTATAT+TGG 0.255864 8_1:+71920954 None:intergenic
CTTCCTCATCGAACGTAAAA+TGG 0.256761 8_1:-71922854 Msa1212070:CDS
TTGGCCTACTTATAAGGTTT+TGG 0.265070 8_1:-71921336 Msa1212070:CDS
GACATATTGGCCTACTTATA+AGG 0.266128 8_1:-71921342 Msa1212070:CDS
TGAGGAAATATTTGGAGAAA+TGG 0.276745 8_1:-71921370 Msa1212070:CDS
CAGCAACATGGTCACATTTC+GGG 0.283311 8_1:+71921693 None:intergenic
GGCGGTGGGTGGTGGGTTTA+GGG 0.292291 8_1:+71923007 None:intergenic
AGAGCCGAGGACAAGATCTT+AGG 0.294607 8_1:-71921608 Msa1212070:CDS
TTGATGATTATCTTAGAAAT+AGG 0.295715 8_1:-71922648 Msa1212070:CDS
TTGGAAGTTGATGCTGTTAT+TGG 0.299811 8_1:-71922490 Msa1212070:CDS
AGAAATAGGGCTAAGGAAAA+TGG 0.307503 8_1:-71922634 Msa1212070:CDS
GAATTTGCGGCGGTGGGTGG+TGG 0.309453 8_1:+71922999 None:intergenic
TCTGCTGCTGCACCACCTGC+TGG 0.311242 8_1:+71922904 None:intergenic
CCTGACAATCTTCGTGGCCT+TGG 0.325683 8_1:+71921542 None:intergenic
GACGTTTCTCCTGACTTCTA+TGG 0.335820 8_1:-71921725 Msa1212070:CDS
ACAGCAACATGGTCACATTT+CGG 0.342019 8_1:+71921692 None:intergenic
TCTTCTTATGATGGGAAAAC+TGG 0.344602 8_1:-71922535 Msa1212070:CDS
TTGTGATTTGTGGGAGTTCA+TGG 0.346466 8_1:+71923188 None:intergenic
CTTCATTATTCTTCTTATGA+TGG 0.346960 8_1:-71922544 Msa1212070:CDS
GAATTTATGAGATTTGATTT+AGG 0.351328 8_1:-71920848 Msa1212070:three_prime_UTR
TGCGCACATCCTCCCACTCT+TGG 0.361852 8_1:+71921448 None:intergenic
ACACCATAGGGAGCTTGGTT+AGG 0.364847 8_1:-71921157 Msa1212070:CDS
GAGGAAATATTTGGAGAAAT+GGG 0.367293 8_1:-71921369 Msa1212070:CDS
TTAAATATACCAATGATAAT+TGG 0.368524 8_1:-71920775 Msa1212070:three_prime_UTR
TGATGATTATCTTAGAAATA+GGG 0.374290 8_1:-71922647 Msa1212070:CDS
GATTCCTTCTCCGGAACATT+TGG 0.376897 8_1:+71921481 None:intergenic
GTCAGGGAGGGTCGCGCTTG+TGG 0.383632 8_1:-71921525 Msa1212070:CDS
TTCTCCTGACTTCTATGGTT+GGG 0.386278 8_1:-71921720 Msa1212070:CDS
GCGCTTGTGGGTGATGCTGC+TGG 0.386839 8_1:-71921512 Msa1212070:CDS
GATAATTGGTCTAGTTGATA+AGG 0.388986 8_1:-71920761 Msa1212070:three_prime_UTR
CTTAAGTCTCATGAGTATAT+TGG 0.401506 8_1:-71922691 Msa1212070:CDS
TCCAATCACCAGTCTATATT+GGG 0.403384 8_1:+71920955 None:intergenic
TGGATATGGTTTGTGATTTG+TGG 0.404759 8_1:+71923178 None:intergenic
GAGCCGAGGACAAGATCTTA+GGG 0.407230 8_1:-71921607 Msa1212070:CDS
CCAAGGCCACGAAGATTGTC+AGG 0.407730 8_1:-71921542 Msa1212070:CDS
TTAGGGCGGTAGGAGAATTG+AGG 0.413203 8_1:+71923024 None:intergenic
TGGTTAGGGCTAATGCTCTA+AGG 0.419103 8_1:-71921142 Msa1212070:CDS
AGAGGCAATTGTGCAGGGTT+CGG 0.420268 8_1:-71921426 Msa1212070:CDS
GGATATGGTTTGTGATTTGT+GGG 0.424823 8_1:+71923179 None:intergenic
TCAACTAGACCAATTATCAT+TGG 0.432252 8_1:+71920766 None:intergenic
GTCATCGGCGGTGGTCCAGC+AGG 0.435902 8_1:-71922919 Msa1212070:CDS
TGATAAATTAATATGTATAC+AGG 0.436388 8_1:+71921061 None:intergenic
TCAACAAAAGCTTCCCTAGC+AGG 0.436433 8_1:+71921281 None:intergenic
TTCATTATTCTTCTTATGAT+GGG 0.438606 8_1:-71922543 Msa1212070:CDS
TGATTATCTGTATAAGCAAA+CGG 0.439486 8_1:-71920996 Msa1212070:three_prime_UTR
ACTGGTGATTGGAGCATAGC+AGG 0.439829 8_1:-71920945 Msa1212070:three_prime_UTR
CTGTACAAGACTGTTGTGCC+TGG 0.441769 8_1:-71921212 Msa1212070:CDS
GAAGAATAATGAAGAACATA+AGG 0.446087 8_1:+71922553 None:intergenic
TGCATGTAGTATTTATCAGC+TGG 0.447435 8_1:-71920870 Msa1212070:three_prime_UTR
GGCCTTGGATGTTCTGGGAT+AGG 0.448676 8_1:+71921557 None:intergenic
AATTTGCGGCGGTGGGTGGT+GGG 0.451182 8_1:+71923000 None:intergenic
GGCTACGTGACCAAATGTTC+CGG 0.451819 8_1:-71921491 Msa1212070:CDS
AAAAGCTTCCCTAGCAGGAT+TGG 0.453043 8_1:+71921286 None:intergenic
TGGTTGAAGAAGGGGATTTG+AGG 0.453345 8_1:-71921388 Msa1212070:CDS
AGATATATATAACTAACATA+AGG 0.453444 8_1:+71920816 None:intergenic
CACCATAGGGAGCTTGGTTA+GGG 0.453641 8_1:-71921156 Msa1212070:CDS
TTCGTGGCCTTGGATGTTCT+GGG 0.456103 8_1:+71921552 None:intergenic
CGACTGTGAATTTGCGGCGG+TGG 0.457559 8_1:+71922992 None:intergenic
GGGAAGAGGATGGTTGAAGA+AGG 0.458022 8_1:-71921398 Msa1212070:CDS
GATTATCTGTATAAGCAAAC+GGG 0.458257 8_1:-71920995 Msa1212070:three_prime_UTR
GATGGGAAAACTGGTGGGGT+TGG 0.460324 8_1:-71922526 Msa1212070:CDS
GGAAGAGGATGGTTGAAGAA+GGG 0.461222 8_1:-71921397 Msa1212070:CDS
TGACAGCAACACGGAGGTTA+CGG 0.462952 8_1:+71922938 None:intergenic
AACCTCCGTGTTGCTGTCAT+CGG 0.464918 8_1:-71922934 Msa1212070:CDS
GCCTTGGATGTTCTGGGATA+GGG 0.465690 8_1:+71921558 None:intergenic
AGAAATGGGACAAGACATAT+TGG 0.468367 8_1:-71921355 Msa1212070:CDS
CGGAGAAATCATCTTCATCT+TGG 0.469756 8_1:+71922744 None:intergenic
AATGGAGCGAATATTATCAA+TGG 0.469785 8_1:-71922616 Msa1212070:CDS
GACCATGTTGCTGTCGGCAC+TGG 0.473506 8_1:-71921683 Msa1212070:CDS
GGTGGTGGGTTTAGGGCGGT+AGG 0.478507 8_1:+71923014 None:intergenic
TTGTGCAGGGTTCGGCGAAT+GGG 0.480844 8_1:-71921418 Msa1212070:CDS
TGCAAAATAGATTCCTTCTC+CGG 0.483867 8_1:+71921472 None:intergenic
GGAGGCCGAGGAAGGATTTG+AGG 0.485174 8_1:+71923067 None:intergenic
AATGGAGCTCATGGTGATTG+AGG 0.485588 8_1:+71923092 None:intergenic
GTGCGCAGAGGCAATTGTGC+AGG 0.486232 8_1:-71921432 Msa1212070:CDS
ATTGTGCAGGGTTCGGCGAA+TGG 0.489244 8_1:-71921419 Msa1212070:CDS
AATTAATATGTATACAGGTC+AGG 0.493949 8_1:+71921066 None:intergenic
ACCCTCCCTGACAATCTTCG+TGG 0.495621 8_1:+71921536 None:intergenic
CGTGTTGCTGTCATCGGCGG+TGG 0.497341 8_1:-71922928 Msa1212070:CDS
GTGAGGAAATGCGGAGGCCG+AGG 0.498992 8_1:+71923055 None:intergenic
GAAGAGGATGGTTGAAGAAG+GGG 0.499187 8_1:-71921396 Msa1212070:CDS
TCCCAATATAGACTGGTGAT+TGG 0.500678 8_1:-71920956 Msa1212070:three_prime_UTR
GATATATATAACTAACATAA+GGG 0.500690 8_1:+71920817 None:intergenic
TAGGGCGGTAGGAGAATTGA+GGG 0.504156 8_1:+71923025 None:intergenic
GCCATTCCTCTCTGCATGGT+TGG 0.506344 8_1:-71922808 Msa1212070:CDS
CGGCGACGACTGTGAATTTG+CGG 0.507176 8_1:+71922986 None:intergenic
TCGAATGTCGCCGTCGACAT+TGG 0.508885 8_1:-71922721 Msa1212070:CDS
ATGGAGCGAATATTATCAAT+GGG 0.512254 8_1:-71922615 Msa1212070:CDS
TATCAACACCATAGGGAGCT+TGG 0.521041 8_1:-71921162 Msa1212070:CDS
CATGCAATCCCAATATAGAC+TGG 0.523727 8_1:-71920963 Msa1212070:three_prime_UTR
TTTCTCCTGACTTCTATGGT+TGG 0.523760 8_1:-71921721 Msa1212070:CDS
GAGGCCGAGGAAGGATTTGA+GGG 0.525450 8_1:+71923068 None:intergenic
TTGTGGGAGTTCATGGCCGT+TGG 0.528080 8_1:+71923195 None:intergenic
ATGGAGCTCATGGTGATTGA+GGG 0.528894 8_1:+71923093 None:intergenic
TGTTGTGCCTGGGAGTCCAT+TGG 0.531085 8_1:-71921201 Msa1212070:CDS
GATGCTGTTATTGGTGCTGA+TGG 0.532399 8_1:-71922481 Msa1212070:CDS
AATACCCAACCATAGAAGTC+AGG 0.535634 8_1:+71921716 None:intergenic
GGTGGGTGGTGGGTTTAGGG+CGG 0.536276 8_1:+71923010 None:intergenic
AGCCCTAACCAAGCTCCCTA+TGG 0.537896 8_1:+71921154 None:intergenic
GTGTGGGAGTGAGGAATGAG+AGG 0.538614 8_1:+71923119 None:intergenic
AAGTTGGCTATCAACACCAT+AGG 0.539875 8_1:-71921170 Msa1212070:CDS
TGTGAATTTGCGGCGGTGGG+TGG 0.540816 8_1:+71922996 None:intergenic
CTTATGATGGGAAAACTGGT+GGG 0.540873 8_1:-71922531 Msa1212070:CDS
GCAGCAGAAACACTAGCAAA+AGG 0.541139 8_1:-71922889 Msa1212070:CDS
TTTACAGGTCCAATCCTGCT+AGG 0.541349 8_1:-71921295 Msa1212070:CDS
GACTTATTACGAGGATCTTG+CGG 0.541408 8_1:-71921765 Msa1212070:CDS
GGGAGTTCATGGCCGTTGGA+TGG 0.542234 8_1:+71923199 None:intergenic
ATATCCTCCAATGGACTCCC+AGG 0.545006 8_1:+71921194 None:intergenic
GAATTGAGGGGTTTCTGGTG+AGG 0.545716 8_1:+71923038 None:intergenic
TCTTATGATGGGAAAACTGG+TGG 0.545852 8_1:-71922532 Msa1212070:CDS
ATATCCAAAACCTTATAAGT+AGG 0.547753 8_1:+71921332 None:intergenic
GTCTCATGAGTATATTGGTA+TGG 0.549402 8_1:-71922686 Msa1212070:CDS
GACTGTGAATTTGCGGCGGT+GGG 0.549856 8_1:+71922993 None:intergenic
GTGACCAAATGTTCCGGAGA+AGG 0.556989 8_1:-71921485 Msa1212070:CDS
CACTGGAACTGTGACACACA+AGG 0.561378 8_1:-71921666 Msa1212070:CDS
TTACAGGTCCAATCCTGCTA+GGG 0.562987 8_1:-71921294 Msa1212070:CDS
AGGGTTCGGCGAATGGGAAG+AGG 0.563143 8_1:-71921412 Msa1212070:CDS
CTGGTGATTGGAGCATAGCA+GGG 0.564836 8_1:-71920944 Msa1212070:three_prime_UTR
TTTGAGGGCAATGGAGCTCA+TGG 0.565078 8_1:+71923083 None:intergenic
GGATCTTGCGGAGATGTATG+TGG 0.566935 8_1:-71921753 Msa1212070:CDS
AGGAGCCATTCCTCTCTGCA+TGG 0.568282 8_1:-71922812 Msa1212070:CDS
CTCCGTGTTGCTGTCATCGG+CGG 0.569095 8_1:-71922931 Msa1212070:CDS
GAGGAAGGATTTGAGGGCAA+TGG 0.569467 8_1:+71923074 None:intergenic
GGGTTTCTGGTGAGGAAATG+CGG 0.575378 8_1:+71923046 None:intergenic
TCCATTGGAGGATATCAAGT+TGG 0.576911 8_1:-71921186 Msa1212070:CDS
GTTGCTAAGTCTATTGATGC+TGG 0.578907 8_1:-71922445 Msa1212070:CDS
ATGTCGCCGTCGACATTGGT+AGG 0.579219 8_1:-71922717 Msa1212070:CDS
TGAGGGAAAGTGTGGGAGTG+AGG 0.580394 8_1:+71923110 None:intergenic
ATGTCGACGGCGACATTCGA+CGG 0.582173 8_1:+71922724 None:intergenic
ATCGGCGGTGGTCCAGCAGG+TGG 0.582561 8_1:-71922916 Msa1212070:CDS
ATTGCCCTCAAATCCTTCCT+CGG 0.585608 8_1:-71923072 Msa1212070:CDS
ACCCTATCCCAGAACATCCA+AGG 0.590122 8_1:-71921559 Msa1212070:CDS
GCCACGAAGATTGTCAGGGA+GGG 0.591898 8_1:-71921537 Msa1212070:CDS
TTATCTTAGAAATAGGGCTA+AGG 0.596386 8_1:-71922641 Msa1212070:CDS
CGGCGGTCAATGATGTCTAG+TGG 0.598418 8_1:+71922772 None:intergenic
GGAAATGCGGAGGCCGAGGA+AGG 0.607962 8_1:+71923059 None:intergenic
TTATGATGGGAAAACTGGTG+GGG 0.607967 8_1:-71922530 Msa1212070:CDS
GATTCTTAATGATCTTACAA+AGG 0.611585 8_1:-71920739 Msa1212070:three_prime_UTR
TGTACAAGACTGTTGTGCCT+GGG 0.612477 8_1:-71921211 Msa1212070:CDS
TTAGGGCTAATGCTCTAAGG+AGG 0.617977 8_1:-71921139 Msa1212070:CDS
TGCGCAGAGGCAATTGTGCA+GGG 0.620081 8_1:-71921431 Msa1212070:CDS
GGTCAATGATGTCTAGTGGA+AGG 0.620194 8_1:+71922776 None:intergenic
GCCAACTTGATATCCTCCAA+TGG 0.620794 8_1:+71921185 None:intergenic
ACCAACCATGCAGAGAGGAA+TGG 0.622279 8_1:+71922807 None:intergenic
AGAGGAATGGCTCCTCCACA+TGG 0.622376 8_1:+71922820 None:intergenic
AGTTGGCTATCAACACCATA+GGG 0.624989 8_1:-71921169 Msa1212070:CDS
TTCGGCGAATGGGAAGAGGA+TGG 0.627116 8_1:-71921408 Msa1212070:CDS
CACCGCCGATGACAGCAACA+CGG 0.629634 8_1:+71922929 None:intergenic
TAATGCTCTAAGGAGGGAGA+TGG 0.631923 8_1:-71921132 Msa1212070:CDS
ATGGTGATTGAGGGAAAGTG+TGG 0.636312 8_1:+71923102 None:intergenic
TCTTCATCTCATCCATCCAA+CGG 0.637272 8_1:-71923211 Msa1212070:five_prime_UTR
GCAGAAACACTAGCAAAAGG+TGG 0.639267 8_1:-71922886 Msa1212070:CDS
TAGGGCTAATGCTCTAAGGA+GGG 0.641569 8_1:-71921138 Msa1212070:CDS
TCATCTTCATCTTGGTAACA+CGG 0.646038 8_1:+71922752 None:intergenic
AGAAGTTTCAACTAGCAACA+AGG 0.653441 8_1:-71921634 Msa1212070:CDS
GCCGAGGACAAGATCTTAGG+GGG 0.656426 8_1:-71921605 Msa1212070:CDS
ATGAGTATATTGGTATGGTG+AGG 0.657171 8_1:-71922681 Msa1212070:CDS
TTCCAGTGCCGACAGCAACA+TGG 0.659892 8_1:+71921681 None:intergenic
GACAACTGCAAACCATGTGG+AGG 0.664445 8_1:-71922832 Msa1212070:CDS
GGCCACGAAGATTGTCAGGG+AGG 0.664448 8_1:-71921538 Msa1212070:CDS
TGGATGGATGAGATGAAGAG+TGG 0.664814 8_1:+71923215 None:intergenic
CGACGACTGTGAATTTGCGG+CGG 0.665671 8_1:+71922989 None:intergenic
AGCAACAAGGAAAAGAGCCG+AGG 0.665901 8_1:-71921621 Msa1212070:CDS
AAATGTGACCATGTTGCTGT+CGG 0.670974 8_1:-71921689 Msa1212070:CDS
CAAGGCCACGAAGATTGTCA+GGG 0.673953 8_1:-71921541 Msa1212070:CDS
ACTGGAACTGTGACACACAA+GGG 0.674007 8_1:-71921665 Msa1212070:CDS
AAGTGTCCTACCAATGTCGA+CGG 0.676648 8_1:+71922711 None:intergenic
GATCTTGCGGAGATGTATGT+GGG 0.677527 8_1:-71921752 Msa1212070:CDS
GAGTGGGAGGATGTGCGCAG+AGG 0.683072 8_1:-71921444 Msa1212070:CDS
GGGCAAGATTATCCGCGTGG+AGG 0.683650 8_1:-71921585 Msa1212070:CDS
ATGGACAACTGCAAACCATG+TGG 0.691065 8_1:-71922835 Msa1212070:CDS
TATTGGTATGGTGAGGCGTG+AGG 0.696798 8_1:-71922674 Msa1212070:CDS
AGGGCGGTAGGAGAATTGAG+GGG 0.702409 8_1:+71923026 None:intergenic
TGGTGATTGAGGGAAAGTGT+GGG 0.706577 8_1:+71923103 None:intergenic
AACTCACCAACCATGCAGAG+AGG 0.710486 8_1:+71922802 None:intergenic
AGCCGAGGACAAGATCTTAG+GGG 0.711384 8_1:-71921606 Msa1212070:CDS
TTTCTGGTGAGGAAATGCGG+AGG 0.722078 8_1:+71923049 None:intergenic
TGACAAAATGACTTATTACG+AGG 0.726774 8_1:-71921774 Msa1212070:CDS
CGCCGATGACAGCAACACGG+AGG 0.740400 8_1:+71922932 None:intergenic
GGATAGGGTGAGCCTCCACG+CGG 0.765358 8_1:+71921573 None:intergenic
TCTTCATCTTGGTAACACGG+CGG 0.792919 8_1:+71922755 None:intergenic
ACAGTGATGAATGACTATTG+TGG 0.842544 8_1:+71921092 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTAAATTGGTAATT+TGG + chr8_1:71921597-71921616 None:intergenic 10.0%
!! TGATAAATTAATATGTATAC+AGG + chr8_1:71922814-71922833 None:intergenic 15.0%
!! GATATATATAACTAACATAA+GGG + chr8_1:71923058-71923077 None:intergenic 15.0%
!! AGATATATATAACTAACATA+AGG + chr8_1:71923059-71923078 None:intergenic 15.0%
!! TTAAATATACCAATGATAAT+TGG - chr8_1:71923097-71923116 Msa1212070:CDS 15.0%
!!! ATTTTATGTGGATAGATTTT+GGG + chr8_1:71920635-71920654 None:intergenic 20.0%
!!! TTGATGATTATCTTAGAAAT+AGG - chr8_1:71921224-71921243 Msa1212070:CDS 20.0%
!! TGATGATTATCTTAGAAATA+GGG - chr8_1:71921225-71921244 Msa1212070:CDS 20.0%
!! TTCATTATTCTTCTTATGAT+GGG - chr8_1:71921329-71921348 Msa1212070:CDS 20.0%
!! AATTGTAAGATGTAACAATT+TGG - chr8_1:71921617-71921636 Msa1212070:CDS 20.0%
!!! ACAATTTGGTCTTAAAATTA+AGG - chr8_1:71921631-71921650 Msa1212070:CDS 20.0%
!!! CAATTTGGTCTTAAAATTAA+GGG - chr8_1:71921632-71921651 Msa1212070:CDS 20.0%
!!! TCACATTAGTGTTATTATTT+TGG - chr8_1:71921675-71921694 Msa1212070:CDS 20.0%
!!! TCAAGTATTGTTCAATTTAA+GGG + chr8_1:71921840-71921859 None:intergenic 20.0%
!!! ATCAAGTATTGTTCAATTTA+AGG + chr8_1:71921841-71921860 None:intergenic 20.0%
!!! GAATTTATGAGATTTGATTT+AGG - chr8_1:71923024-71923043 Msa1212070:CDS 20.0%
!!! TGTCAATGTAAGAATTTTAT+CGG - chr8_1:71923174-71923193 Msa1212070:CDS 20.0%
!! GATTTTATGTGGATAGATTT+TGG + chr8_1:71920636-71920655 None:intergenic 25.0%
! GAAGAATAATGAAGAACATA+AGG + chr8_1:71921322-71921341 None:intergenic 25.0%
! CTTCATTATTCTTCTTATGA+TGG - chr8_1:71921328-71921347 Msa1212070:CDS 25.0%
!! TTCTGTGAATTAGCAATTTT+TGG - chr8_1:71921519-71921538 Msa1212070:CDS 25.0%
! ATATGAAACCTTCCTAAATA+CGG + chr8_1:71921738-71921757 None:intergenic 25.0%
!!! CAAATTAGTCTTGAAATAGT+AGG + chr8_1:71921935-71921954 None:intergenic 25.0%
! CTACTATTTCAAGACTAATT+TGG - chr8_1:71921933-71921952 Msa1212070:intron 25.0%
!!! ATGTGGTTTCTATTTTTGAA+AGG - chr8_1:71922003-71922022 Msa1212070:intron 25.0%
!! ATTAGCATGTTTCATTTTGA+TGG - chr8_1:71922037-71922056 Msa1212070:intron 25.0%
!!! TAATAAGTCATTTTGTCATC+CGG + chr8_1:71922096-71922115 None:intergenic 25.0%
! ATATCCAAAACCTTATAAGT+AGG + chr8_1:71922543-71922562 None:intergenic 25.0%
! AATTAATATGTATACAGGTC+AGG + chr8_1:71922809-71922828 None:intergenic 25.0%
! TGATTATCTGTATAAGCAAA+CGG - chr8_1:71922876-71922895 Msa1212070:CDS 25.0%
! GATTCTTAATGATCTTACAA+AGG - chr8_1:71923133-71923152 Msa1212070:CDS 25.0%
!!! TTTTATTGGAATGGTGGATA+TGG + chr8_1:71920711-71920730 None:intergenic 30.0%
!! TTTGTGGTGATGTGTTTTAT+TGG + chr8_1:71920725-71920744 None:intergenic 30.0%
!! ATGAGAGGTTTGAAATTTTG+TGG + chr8_1:71920741-71920760 None:intergenic 30.0%
CTTAAGTCTCATGAGTATAT+TGG - chr8_1:71921181-71921200 Msa1212070:CDS 30.0%
TTATCTTAGAAATAGGGCTA+AGG - chr8_1:71921231-71921250 Msa1212070:CDS 30.0%
AATGGAGCGAATATTATCAA+TGG - chr8_1:71921256-71921275 Msa1212070:CDS 30.0%
ATGGAGCGAATATTATCAAT+GGG - chr8_1:71921257-71921276 Msa1212070:CDS 30.0%
!!! CAATGGGTTGTTTTTGAAAA+TGG - chr8_1:71921273-71921292 Msa1212070:CDS 30.0%
TGAATATGCTATTGCATTTC+AGG - chr8_1:71921456-71921475 Msa1212070:CDS 30.0%
AGGGTAAATACTCTATAACA+TGG - chr8_1:71921651-71921670 Msa1212070:CDS 30.0%
! TGAGTTTGAAATCCGTATTT+AGG - chr8_1:71921723-71921742 Msa1212070:CDS 30.0%
! TTTGAAATCCGTATTTAGGA+AGG - chr8_1:71921727-71921746 Msa1212070:CDS 30.0%
AATGAGACCAATGACAAAAT+TGG + chr8_1:71921885-71921904 None:intergenic 30.0%
TGGTCTCATTTACTCATTTA+AGG - chr8_1:71921895-71921914 Msa1212070:intron 30.0%
AATAGTAGGATTAGACAACT+TGG + chr8_1:71921921-71921940 None:intergenic 30.0%
! TAGTTCATTGTGGTGTTTTA+TGG - chr8_1:71921977-71921996 Msa1212070:intron 30.0%
!! CATGTTTCATTTTGATGGTA+TGG - chr8_1:71922042-71922061 Msa1212070:intron 30.0%
ATGGTATGGTTAAATTTCTC+AGG - chr8_1:71922056-71922075 Msa1212070:intron 30.0%
!! AATAAGTCATTTTGTCATCC+GGG + chr8_1:71922095-71922114 None:intergenic 30.0%
TGACAAAATGACTTATTACG+AGG - chr8_1:71922098-71922117 Msa1212070:intron 30.0%
TGAGGAAATATTTGGAGAAA+TGG - chr8_1:71922502-71922521 Msa1212070:CDS 30.0%
GAGGAAATATTTGGAGAAAT+GGG - chr8_1:71922503-71922522 Msa1212070:CDS 30.0%
GATTATCTGTATAAGCAAAC+GGG - chr8_1:71922877-71922896 Msa1212070:CDS 30.0%
TCAACTAGACCAATTATCAT+TGG + chr8_1:71923109-71923128 None:intergenic 30.0%
! GATAATTGGTCTAGTTGATA+AGG - chr8_1:71923111-71923130 Msa1212070:CDS 30.0%
! CAATGTAAGAATTTTATCGG+TGG - chr8_1:71923177-71923196 Msa1212070:CDS 30.0%
! TGAAGAGTGGAGATTTTATG+TGG + chr8_1:71920647-71920666 None:intergenic 35.0%
! GGATATGGTTTGTGATTTGT+GGG + chr8_1:71920696-71920715 None:intergenic 35.0%
! TGGATATGGTTTGTGATTTG+TGG + chr8_1:71920697-71920716 None:intergenic 35.0%
!! GATGTGTTTTATTGGAATGG+TGG + chr8_1:71920717-71920736 None:intergenic 35.0%
!! GGTGATGTGTTTTATTGGAA+TGG + chr8_1:71920720-71920739 None:intergenic 35.0%
! TCATCTTCATCTTGGTAACA+CGG + chr8_1:71921123-71921142 None:intergenic 35.0%
GTCTCATGAGTATATTGGTA+TGG - chr8_1:71921186-71921205 Msa1212070:CDS 35.0%
ATGAGTATATTGGTATGGTG+AGG - chr8_1:71921191-71921210 Msa1212070:CDS 35.0%
AGAAATAGGGCTAAGGAAAA+TGG - chr8_1:71921238-71921257 Msa1212070:CDS 35.0%
!! TAAGGCGCATTCTTTTGTTT+AGG + chr8_1:71921304-71921323 None:intergenic 35.0%
! TCTTCTTATGATGGGAAAAC+TGG - chr8_1:71921337-71921356 Msa1212070:CDS 35.0%
!! GGTTGGTGAAAAAACTACTT+TGG - chr8_1:71921363-71921382 Msa1212070:CDS 35.0%
!! TTGGAAGTTGATGCTGTTAT+TGG - chr8_1:71921382-71921401 Msa1212070:CDS 35.0%
ATGTCAACCGAGTCTTTAAT+CGG - chr8_1:71921548-71921567 Msa1212070:CDS 35.0%
!! TTTATAGTCTTGTCTTGTGC+AGG - chr8_1:71921779-71921798 Msa1212070:CDS 35.0%
!! TTATAGTCTTGTCTTGTGCA+GGG - chr8_1:71921780-71921799 Msa1212070:CDS 35.0%
ACAAAATTGGCATGCACAAA+AGG + chr8_1:71921872-71921891 None:intergenic 35.0%
GACTTAGATGTAGTTCATTG+TGG - chr8_1:71921967-71921986 Msa1212070:intron 35.0%
! GTGGTGTTTTATGGTTTATG+TGG - chr8_1:71921986-71922005 Msa1212070:intron 35.0%
ATGGTTAAATTTCTCAGGAG+AGG - chr8_1:71922061-71922080 Msa1212070:intron 35.0%
AGAAGTTTCAACTAGCAACA+AGG - chr8_1:71922238-71922257 Msa1212070:intron 35.0%
TGCAAAATAGATTCCTTCTC+CGG + chr8_1:71922403-71922422 None:intergenic 35.0%
AGGGGATTTGAGGAAATATT+TGG - chr8_1:71922494-71922513 Msa1212070:CDS 35.0%
AGAAATGGGACAAGACATAT+TGG - chr8_1:71922517-71922536 Msa1212070:CDS 35.0%
! GACATATTGGCCTACTTATA+AGG - chr8_1:71922530-71922549 Msa1212070:CDS 35.0%
! TTGGCCTACTTATAAGGTTT+TGG - chr8_1:71922536-71922555 Msa1212070:CDS 35.0%
!!! GGTTTTGGATATTCTTCAGA+AGG - chr8_1:71922551-71922570 Msa1212070:CDS 35.0%
!!! TTCTTCAGAAGGTGTTTTAC+AGG - chr8_1:71922562-71922581 Msa1212070:CDS 35.0%
ACAGTGATGAATGACTATTG+TGG + chr8_1:71922783-71922802 None:intergenic 35.0%
TCCAATCACCAGTCTATATT+GGG + chr8_1:71922920-71922939 None:intergenic 35.0%
TGCATGTAGTATTTATCAGC+TGG - chr8_1:71923002-71923021 Msa1212070:CDS 35.0%
TCTTCATCTCATCCATCCAA+CGG - chr8_1:71920661-71920680 Msa1212070:three_prime_UTR 40.0%
! TTGTGATTTGTGGGAGTTCA+TGG + chr8_1:71920687-71920706 None:intergenic 40.0%
! CATTTTACGTTCGATGAGGA+AGG + chr8_1:71921020-71921039 None:intergenic 40.0%
CTTCCTCATCGAACGTAAAA+TGG - chr8_1:71921018-71921037 Msa1212070:three_prime_UTR 40.0%
! TGTCCATTTTACGTTCGATG+AGG + chr8_1:71921024-71921043 None:intergenic 40.0%
CGGAGAAATCATCTTCATCT+TGG + chr8_1:71921131-71921150 None:intergenic 40.0%
! TCTTATGATGGGAAAACTGG+TGG - chr8_1:71921340-71921359 Msa1212070:CDS 40.0%
! CTTATGATGGGAAAACTGGT+GGG - chr8_1:71921341-71921360 Msa1212070:CDS 40.0%
! TTATGATGGGAAAACTGGTG+GGG - chr8_1:71921342-71921361 Msa1212070:CDS 40.0%
GTTGCTAAGTCTATTGATGC+TGG - chr8_1:71921427-71921446 Msa1212070:CDS 40.0%
TGTCAACCGAGTCTTTAATC+GGG - chr8_1:71921549-71921568 Msa1212070:CDS 40.0%
CTAGAACCCGATTAAAGACT+CGG + chr8_1:71921558-71921577 None:intergenic 40.0%
! GTGCATGCCAATTTTGTCAT+TGG - chr8_1:71921875-71921894 Msa1212070:intron 40.0%
TCAGGAGAGGATAAAAATCC+CGG - chr8_1:71922074-71922093 Msa1212070:intron 40.0%
GACTTATTACGAGGATCTTG+CGG - chr8_1:71922107-71922126 Msa1212070:intron 40.0%
TTTCTCCTGACTTCTATGGT+TGG - chr8_1:71922151-71922170 Msa1212070:intron 40.0%
TTCTCCTGACTTCTATGGTT+GGG - chr8_1:71922152-71922171 Msa1212070:intron 40.0%
AATACCCAACCATAGAAGTC+AGG + chr8_1:71922159-71922178 None:intergenic 40.0%
ACAGCAACATGGTCACATTT+CGG + chr8_1:71922183-71922202 None:intergenic 40.0%
AAATGTGACCATGTTGCTGT+CGG - chr8_1:71922183-71922202 Msa1212070:intron 40.0%
! ATCTATTTTGCAGCCAAGAG+TGG - chr8_1:71922411-71922430 Msa1212070:intron 40.0%
! TCTATTTTGCAGCCAAGAGT+GGG - chr8_1:71922412-71922431 Msa1212070:intron 40.0%
TCCATTGGAGGATATCAAGT+TGG - chr8_1:71922686-71922705 Msa1212070:CDS 40.0%
AAGTTGGCTATCAACACCAT+AGG - chr8_1:71922702-71922721 Msa1212070:CDS 40.0%
AGTTGGCTATCAACACCATA+GGG - chr8_1:71922703-71922722 Msa1212070:CDS 40.0%
CATGCAATCCCAATATAGAC+TGG - chr8_1:71922909-71922928 Msa1212070:CDS 40.0%
TCCCAATATAGACTGGTGAT+TGG - chr8_1:71922916-71922935 Msa1212070:CDS 40.0%
CTCCAATCACCAGTCTATAT+TGG + chr8_1:71922921-71922940 None:intergenic 40.0%
TGGATGGATGAGATGAAGAG+TGG + chr8_1:71920660-71920679 None:intergenic 45.0%
! TGGTGATTGAGGGAAAGTGT+GGG + chr8_1:71920772-71920791 None:intergenic 45.0%
ATGGTGATTGAGGGAAAGTG+TGG + chr8_1:71920773-71920792 None:intergenic 45.0%
ATGGAGCTCATGGTGATTGA+GGG + chr8_1:71920782-71920801 None:intergenic 45.0%
AATGGAGCTCATGGTGATTG+AGG + chr8_1:71920783-71920802 None:intergenic 45.0%
ATTGCCCTCAAATCCTTCCT+CGG - chr8_1:71920800-71920819 Msa1212070:three_prime_UTR 45.0%
TAGGAGAATTGAGGGGTTTC+TGG + chr8_1:71920842-71920861 None:intergenic 45.0%
!!! GGTTACGGCCATCGATTTTT+GGG + chr8_1:71920922-71920941 None:intergenic 45.0%
!!! AGGTTACGGCCATCGATTTT+TGG + chr8_1:71920923-71920942 None:intergenic 45.0%
GCAGCAGAAACACTAGCAAA+AGG - chr8_1:71920983-71921002 Msa1212070:three_prime_UTR 45.0%
GCAGAAACACTAGCAAAAGG+TGG - chr8_1:71920986-71921005 Msa1212070:three_prime_UTR 45.0%
ATGGACAACTGCAAACCATG+TGG - chr8_1:71921037-71921056 Msa1212070:three_prime_UTR 45.0%
GGTCAATGATGTCTAGTGGA+AGG + chr8_1:71921099-71921118 None:intergenic 45.0%
! TCTTCATCTTGGTAACACGG+CGG + chr8_1:71921120-71921139 None:intergenic 45.0%
AAGTGTCCTACCAATGTCGA+CGG + chr8_1:71921164-71921183 None:intergenic 45.0%
!! GATGCTGTTATTGGTGCTGA+TGG - chr8_1:71921391-71921410 Msa1212070:CDS 45.0%
CGAGTCTTTAATCGGGTTCT+AGG - chr8_1:71921556-71921575 Msa1212070:CDS 45.0%
GATCTTGCGGAGATGTATGT+GGG - chr8_1:71922120-71922139 Msa1212070:intron 45.0%
GACGTTTCTCCTGACTTCTA+TGG - chr8_1:71922147-71922166 Msa1212070:intron 45.0%
CAGCAACATGGTCACATTTC+GGG + chr8_1:71922182-71922201 None:intergenic 45.0%
ACTGGAACTGTGACACACAA+GGG - chr8_1:71922207-71922226 Msa1212070:intron 45.0%
GATTCCTTCTCCGGAACATT+TGG + chr8_1:71922394-71922413 None:intergenic 45.0%
GGAAGAGGATGGTTGAAGAA+GGG - chr8_1:71922475-71922494 Msa1212070:CDS 45.0%
GAAGAGGATGGTTGAAGAAG+GGG - chr8_1:71922476-71922495 Msa1212070:CDS 45.0%
TGGTTGAAGAAGGGGATTTG+AGG - chr8_1:71922484-71922503 Msa1212070:CDS 45.0%
TTTACAGGTCCAATCCTGCT+AGG - chr8_1:71922577-71922596 Msa1212070:CDS 45.0%
TTACAGGTCCAATCCTGCTA+GGG - chr8_1:71922578-71922597 Msa1212070:CDS 45.0%
AAAAGCTTCCCTAGCAGGAT+TGG + chr8_1:71922589-71922608 None:intergenic 45.0%
TCAACAAAAGCTTCCCTAGC+AGG + chr8_1:71922594-71922613 None:intergenic 45.0%
TGTACAAGACTGTTGTGCCT+GGG - chr8_1:71922661-71922680 Msa1212070:CDS 45.0%
GCCAACTTGATATCCTCCAA+TGG + chr8_1:71922690-71922709 None:intergenic 45.0%
TATCAACACCATAGGGAGCT+TGG - chr8_1:71922710-71922729 Msa1212070:CDS 45.0%
TGGTTAGGGCTAATGCTCTA+AGG - chr8_1:71922730-71922749 Msa1212070:CDS 45.0%
!! TTAGGGCTAATGCTCTAAGG+AGG - chr8_1:71922733-71922752 Msa1212070:CDS 45.0%
!! TAGGGCTAATGCTCTAAGGA+GGG - chr8_1:71922734-71922753 Msa1212070:CDS 45.0%
!! TAATGCTCTAAGGAGGGAGA+TGG - chr8_1:71922740-71922759 Msa1212070:CDS 45.0%
!!! TTACAATTTTAAAATTAAAT+TGG + chr8_1:71921605-71921624 None:intergenic 5.0%
TTTGAGGGCAATGGAGCTCA+TGG + chr8_1:71920792-71920811 None:intergenic 50.0%
GAGGAAGGATTTGAGGGCAA+TGG + chr8_1:71920801-71920820 None:intergenic 50.0%
! TTTCTGGTGAGGAAATGCGG+AGG + chr8_1:71920826-71920845 None:intergenic 50.0%
!! GGGTTTCTGGTGAGGAAATG+CGG + chr8_1:71920829-71920848 None:intergenic 50.0%
!! GAATTGAGGGGTTTCTGGTG+AGG + chr8_1:71920837-71920856 None:intergenic 50.0%
TAGGGCGGTAGGAGAATTGA+GGG + chr8_1:71920850-71920869 None:intergenic 50.0%
TTAGGGCGGTAGGAGAATTG+AGG + chr8_1:71920851-71920870 None:intergenic 50.0%
!!! GATTTTTGGGCTGGTTGCTG+CGG + chr8_1:71920909-71920928 None:intergenic 50.0%
GCAACCAGCCCAAAAATCGA+TGG - chr8_1:71920911-71920930 Msa1212070:three_prime_UTR 50.0%
TGACAGCAACACGGAGGTTA+CGG + chr8_1:71920937-71920956 None:intergenic 50.0%
! AACCTCCGTGTTGCTGTCAT+CGG - chr8_1:71920938-71920957 Msa1212070:three_prime_UTR 50.0%
GACAACTGCAAACCATGTGG+AGG - chr8_1:71921040-71921059 Msa1212070:three_prime_UTR 50.0%
ACCAACCATGCAGAGAGGAA+TGG + chr8_1:71921068-71921087 None:intergenic 50.0%
AACTCACCAACCATGCAGAG+AGG + chr8_1:71921073-71921092 None:intergenic 50.0%
TATTGGTATGGTGAGGCGTG+AGG - chr8_1:71921198-71921217 Msa1212070:CDS 50.0%
GGATCTTGCGGAGATGTATG+TGG - chr8_1:71922119-71922138 Msa1212070:intron 50.0%
CACTGGAACTGTGACACACA+AGG - chr8_1:71922206-71922225 Msa1212070:intron 50.0%
AGCAACAAGGAAAAGAGCCG+AGG - chr8_1:71922251-71922270 Msa1212070:intron 50.0%
AGAGCCGAGGACAAGATCTT+AGG - chr8_1:71922264-71922283 Msa1212070:intron 50.0%
GAGCCGAGGACAAGATCTTA+GGG - chr8_1:71922265-71922284 Msa1212070:intron 50.0%
AGCCGAGGACAAGATCTTAG+GGG - chr8_1:71922266-71922285 Msa1212070:intron 50.0%
ACCCTATCCCAGAACATCCA+AGG - chr8_1:71922313-71922332 Msa1212070:intron 50.0%
!! GCCTTGGATGTTCTGGGATA+GGG + chr8_1:71922317-71922336 None:intergenic 50.0%
! TTCGTGGCCTTGGATGTTCT+GGG + chr8_1:71922323-71922342 None:intergenic 50.0%
CAAGGCCACGAAGATTGTCA+GGG - chr8_1:71922331-71922350 Msa1212070:intron 50.0%
GGCTACGTGACCAAATGTTC+CGG - chr8_1:71922381-71922400 Msa1212070:intron 50.0%
GTGACCAAATGTTCCGGAGA+AGG - chr8_1:71922387-71922406 Msa1212070:intron 50.0%
! ATTTTGCAGCCAAGAGTGGG+AGG - chr8_1:71922415-71922434 Msa1212070:intron 50.0%
AGAGGCAATTGTGCAGGGTT+CGG - chr8_1:71922446-71922465 Msa1212070:CDS 50.0%
GGGAAGAGGATGGTTGAAGA+AGG - chr8_1:71922474-71922493 Msa1212070:CDS 50.0%
CTGTACAAGACTGTTGTGCC+TGG - chr8_1:71922660-71922679 Msa1212070:CDS 50.0%
! ATATCCTCCAATGGACTCCC+AGG + chr8_1:71922681-71922700 None:intergenic 50.0%
ACACCATAGGGAGCTTGGTT+AGG - chr8_1:71922715-71922734 Msa1212070:CDS 50.0%
CACCATAGGGAGCTTGGTTA+GGG - chr8_1:71922716-71922735 Msa1212070:CDS 50.0%
ACTGGTGATTGGAGCATAGC+AGG - chr8_1:71922927-71922946 Msa1212070:CDS 50.0%
CTGGTGATTGGAGCATAGCA+GGG - chr8_1:71922928-71922947 Msa1212070:CDS 50.0%
TTGTGGGAGTTCATGGCCGT+TGG + chr8_1:71920680-71920699 None:intergenic 55.0%
GTGTGGGAGTGAGGAATGAG+AGG + chr8_1:71920756-71920775 None:intergenic 55.0%
! TGAGGGAAAGTGTGGGAGTG+AGG + chr8_1:71920765-71920784 None:intergenic 55.0%
GAGGCCGAGGAAGGATTTGA+GGG + chr8_1:71920807-71920826 None:intergenic 55.0%
AGGGCGGTAGGAGAATTGAG+GGG + chr8_1:71920849-71920868 None:intergenic 55.0%
GACTGTGAATTTGCGGCGGT+GGG + chr8_1:71920882-71920901 None:intergenic 55.0%
CGACGACTGTGAATTTGCGG+CGG + chr8_1:71920886-71920905 None:intergenic 55.0%
CGGCGACGACTGTGAATTTG+CGG + chr8_1:71920889-71920908 None:intergenic 55.0%
!!! ACGGCCATCGATTTTTGGGC+TGG + chr8_1:71920918-71920937 None:intergenic 55.0%
AGAGGAATGGCTCCTCCACA+TGG + chr8_1:71921055-71921074 None:intergenic 55.0%
AGGAGCCATTCCTCTCTGCA+TGG - chr8_1:71921060-71921079 Msa1212070:three_prime_UTR 55.0%
GCCATTCCTCTCTGCATGGT+TGG - chr8_1:71921064-71921083 Msa1212070:three_prime_UTR 55.0%
CGGCGGTCAATGATGTCTAG+TGG + chr8_1:71921103-71921122 None:intergenic 55.0%
ATGTCGACGGCGACATTCGA+CGG + chr8_1:71921151-71921170 None:intergenic 55.0%
TCGAATGTCGCCGTCGACAT+TGG - chr8_1:71921151-71921170 Msa1212070:CDS 55.0%
ATGTCGCCGTCGACATTGGT+AGG - chr8_1:71921155-71921174 Msa1212070:CDS 55.0%
GATGGGAAAACTGGTGGGGT+TGG - chr8_1:71921346-71921365 Msa1212070:CDS 55.0%
!! TTCCAGTGCCGACAGCAACA+TGG + chr8_1:71922194-71922213 None:intergenic 55.0%
GCCGAGGACAAGATCTTAGG+GGG - chr8_1:71922267-71922286 Msa1212070:intron 55.0%
GCCCCCTAAGATCTTGTCCT+CGG + chr8_1:71922271-71922290 None:intergenic 55.0%
!! GGCCTTGGATGTTCTGGGAT+AGG + chr8_1:71922318-71922337 None:intergenic 55.0%
! CTTCGTGGCCTTGGATGTTC+TGG + chr8_1:71922324-71922343 None:intergenic 55.0%
CCTGACAATCTTCGTGGCCT+TGG + chr8_1:71922333-71922352 None:intergenic 55.0%
CCAAGGCCACGAAGATTGTC+AGG - chr8_1:71922330-71922349 Msa1212070:intron 55.0%
GCCACGAAGATTGTCAGGGA+GGG - chr8_1:71922335-71922354 Msa1212070:intron 55.0%
ACCCTCCCTGACAATCTTCG+TGG + chr8_1:71922339-71922358 None:intergenic 55.0%
TGCGCAGAGGCAATTGTGCA+GGG - chr8_1:71922441-71922460 Msa1212070:CDS 55.0%
ATTGTGCAGGGTTCGGCGAA+TGG - chr8_1:71922453-71922472 Msa1212070:CDS 55.0%
TTGTGCAGGGTTCGGCGAAT+GGG - chr8_1:71922454-71922473 Msa1212070:CDS 55.0%
TTCGGCGAATGGGAAGAGGA+TGG - chr8_1:71922464-71922483 Msa1212070:CDS 55.0%
TGTTGTGCCTGGGAGTCCAT+TGG - chr8_1:71922671-71922690 Msa1212070:CDS 55.0%
AGCCCTAACCAAGCTCCCTA+TGG + chr8_1:71922721-71922740 None:intergenic 55.0%
GGGAGTTCATGGCCGTTGGA+TGG + chr8_1:71920676-71920695 None:intergenic 60.0%
GGAGGCCGAGGAAGGATTTG+AGG + chr8_1:71920808-71920827 None:intergenic 60.0%
AATTTGCGGCGGTGGGTGGT+GGG + chr8_1:71920875-71920894 None:intergenic 60.0%
TGTGAATTTGCGGCGGTGGG+TGG + chr8_1:71920879-71920898 None:intergenic 60.0%
CGACTGTGAATTTGCGGCGG+TGG + chr8_1:71920883-71920902 None:intergenic 60.0%
! CTCCGTGTTGCTGTCATCGG+CGG - chr8_1:71920941-71920960 Msa1212070:three_prime_UTR 60.0%
CACCGCCGATGACAGCAACA+CGG + chr8_1:71920946-71920965 None:intergenic 60.0%
GACCATGTTGCTGTCGGCAC+TGG - chr8_1:71922189-71922208 Msa1212070:intron 60.0%
AGGGGGCAAGATTATCCGCG+TGG - chr8_1:71922284-71922303 Msa1212070:intron 60.0%
GGGCAAGATTATCCGCGTGG+AGG - chr8_1:71922287-71922306 Msa1212070:intron 60.0%
GGCCACGAAGATTGTCAGGG+AGG - chr8_1:71922334-71922353 Msa1212070:intron 60.0%
TGCGCACATCCTCCCACTCT+TGG + chr8_1:71922427-71922446 None:intergenic 60.0%
GTGCGCAGAGGCAATTGTGC+AGG - chr8_1:71922440-71922459 Msa1212070:CDS 60.0%
AGGGTTCGGCGAATGGGAAG+AGG - chr8_1:71922460-71922479 Msa1212070:CDS 60.0%
TGTGCCTGGGAGTCCATTGG+AGG - chr8_1:71922674-71922693 Msa1212070:CDS 60.0%
GGAAATGCGGAGGCCGAGGA+AGG + chr8_1:71920816-71920835 None:intergenic 65.0%
GTGAGGAAATGCGGAGGCCG+AGG + chr8_1:71920820-71920839 None:intergenic 65.0%
!! GGTGGTGGGTTTAGGGCGGT+AGG + chr8_1:71920861-71920880 None:intergenic 65.0%
!! GGTGGGTGGTGGGTTTAGGG+CGG + chr8_1:71920865-71920884 None:intergenic 65.0%
!! GGCGGTGGGTGGTGGGTTTA+GGG + chr8_1:71920868-71920887 None:intergenic 65.0%
GAATTTGCGGCGGTGGGTGG+TGG + chr8_1:71920876-71920895 None:intergenic 65.0%
CGCCGATGACAGCAACACGG+AGG + chr8_1:71920943-71920962 None:intergenic 65.0%
! CGTGTTGCTGTCATCGGCGG+TGG - chr8_1:71920944-71920963 Msa1212070:three_prime_UTR 65.0%
TCTGCTGCTGCACCACCTGC+TGG + chr8_1:71920971-71920990 None:intergenic 65.0%
GGATAGGGTGAGCCTCCACG+CGG + chr8_1:71922302-71922321 None:intergenic 65.0%
TCAGGGAGGGTCGCGCTTGT+GGG - chr8_1:71922348-71922367 Msa1212070:intron 65.0%
GCGCTTGTGGGTGATGCTGC+TGG - chr8_1:71922360-71922379 Msa1212070:intron 65.0%
GAGTGGGAGGATGTGCGCAG+AGG - chr8_1:71922428-71922447 Msa1212070:CDS 65.0%
!! CGGCGGTGGGTGGTGGGTTT+AGG + chr8_1:71920869-71920888 None:intergenic 70.0%
GTCATCGGCGGTGGTCCAGC+AGG - chr8_1:71920953-71920972 Msa1212070:three_prime_UTR 70.0%
ATCGGCGGTGGTCCAGCAGG+TGG - chr8_1:71920956-71920975 Msa1212070:three_prime_UTR 70.0%
GTCAGGGAGGGTCGCGCTTG+TGG - chr8_1:71922347-71922366 Msa1212070:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71920629 71923265 71920629 ID=Msa1212070;Name=Msa1212070
chr8_1 mRNA 71920629 71923265 71920629 ID=Msa1212070-mRNA-1;Parent=Msa1212070;Name=Msa1212070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=57|1|1|1|1|1|2|486|497
chr8_1 exon 71920629 71921816 71920629 ID=Msa1212070-mRNA-1:exon:24249;Parent=Msa1212070-mRNA-1
chr8_1 exon 71922417 71923265 71922417 ID=Msa1212070-mRNA-1:exon:24248;Parent=Msa1212070-mRNA-1
chr8_1 five_prime_UTR 71923209 71923265 71923209 ID=Msa1212070-mRNA-1:five_prime_utr;Parent=Msa1212070-mRNA-1
chr8_1 CDS 71922417 71923208 71922417 ID=Msa1212070-mRNA-1:cds;Parent=Msa1212070-mRNA-1
chr8_1 CDS 71921115 71921816 71921115 ID=Msa1212070-mRNA-1:cds;Parent=Msa1212070-mRNA-1
chr8_1 three_prime_UTR 71920629 71921114 71920629 ID=Msa1212070-mRNA-1:three_prime_utr;Parent=Msa1212070-mRNA-1
Gene Sequence

>Msa1212070

ATGAACTCCCACAAATCACAAACCATATCCACCATTCCAATAAAACACATCACCACAAAATTTCAAACCTCTCATTCCTCACTCCCACACTTTCCCTCAATCACCATGAGCTCCATTGCCCTCAAATCCTTCCTCGGCCTCCGCATTTCCTCACCAGAAACCCCTCAATTCTCCTACCGCCCTAAACCCACCACCCACCGCCGCAAATTCACAGTCGTCGCCGCAGCAACCAGCCCAAAAATCGATGGCCGTAACCTCCGTGTTGCTGTCATCGGCGGTGGTCCAGCAGGTGGTGCAGCAGCAGAAACACTAGCAAAAGGTGGAATAGAAACCTTCCTCATCGAACGTAAAATGGACAACTGCAAACCATGTGGAGGAGCCATTCCTCTCTGCATGGTTGGTGAGTTCGACCTTCCACTAGACATCATTGACCGCCGTGTTACCAAGATGAAGATGATTTCTCCGTCGAATGTCGCCGTCGACATTGGTAGGACACTTAAGTCTCATGAGTATATTGGTATGGTGAGGCGTGAGGTGCTTGATGATTATCTTAGAAATAGGGCTAAGGAAAATGGAGCGAATATTATCAATGGGTTGTTTTTGAAAATGGATATTCCTAAACAAAAGAATGCGCCTTATGTTCTTCATTATTCTTCTTATGATGGGAAAACTGGTGGGGTTGGTGAAAAAACTACTTTGGAAGTTGATGCTGTTATTGGTGCTGATGGAGCTAATTCTAGAGTTGCTAAGTCTATTGATGCTGGTGATTATGAATATGCTATTGCATTTCAGGAGAGGATAAAAATCCCGGATGACAAAATGACTTATTACGAGGATCTTGCGGAGATGTATGTGGGTGACGACGTTTCTCCTGACTTCTATGGTTGGGTATTCCCGAAATGTGACCATGTTGCTGTCGGCACTGGAACTGTGACACACAAGGGAGACATCAAGAAGTTTCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGGGGCAAGATTATCCGCGTGGAGGCTCACCCTATCCCAGAACATCCAAGGCCACGAAGATTGTCAGGGAGGGTCGCGCTTGTGGGTGATGCTGCTGGCTACGTGACCAAATGTTCCGGAGAAGGAATCTATTTTGCAGCCAAGAGTGGGAGGATGTGCGCAGAGGCAATTGTGCAGGGTTCGGCGAATGGGAAGAGGATGGTTGAAGAAGGGGATTTGAGGAAATATTTGGAGAAATGGGACAAGACATATTGGCCTACTTATAAGGTTTTGGATATTCTTCAGAAGGTGTTTTACAGGTCCAATCCTGCTAGGGAAGCTTTTGTTGAAATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAGTTATCTGTACAAGACTGTTGTGCCTGGGAGTCCATTGGAGGATATCAAGTTGGCTATCAACACCATAGGGAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATGTATGA

Protein sequence

>Msa1212070

MNSHKSQTISTIPIKHITTKFQTSHSSLPHFPSITMSSIALKSFLGLRISSPETPQFSYRPKPTTHRRKFTVVAAATSPKIDGRNLRVAVIGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKSHEYIGMVRREVLDDYLRNRAKENGANIINGLFLKMDIPKQKNAPYVLHYSSYDGKTGGVGEKTTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSANGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGSPLEDIKLAINTIGSLVRANALRREMDKLNV*