AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0247340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247340 MtrunA17_Chr2g0302021 98.482 527 8 0 1 527 1 527 0.0 1087
Msa0247340 MtrunA17_Chr4g0069841 70.270 481 131 4 51 527 46 518 0.0 719
Msa0247340 MtrunA17_Chr4g0069861 63.389 478 171 2 51 527 45 519 0.0 654
Msa0247340 MtrunA17_Chr7g0272141 48.326 478 219 9 61 525 80 542 1.01e-158 462
Msa0247340 MtrunA17_Chr7g0233771 52.928 444 189 9 92 525 121 554 1.25e-156 457
Msa0247340 MtrunA17_Chr1g0147051 45.421 535 247 11 36 525 73 607 1.10e-154 455
Msa0247340 MtrunA17_Chr3g0126771 43.822 518 257 8 34 525 88 597 1.79e-151 446
Msa0247340 MtrunA17_Chr7g0269541 48.416 442 214 6 92 521 113 552 2.46e-151 444
Msa0247340 MtrunA17_Chr7g0233831 52.027 444 193 9 92 525 122 555 4.71e-151 443
Msa0247340 MtrunA17_Chr7g0233801 51.011 445 203 9 88 525 117 553 4.80e-150 441
Msa0247340 MtrunA17_Chr4g0011771 51.230 447 198 6 81 525 85 513 1.51e-149 438
Msa0247340 MtrunA17_Chr8g0345281 48.802 459 205 6 92 525 136 589 4.81e-142 422
Msa0247340 MtrunA17_Chr8g0391291 46.875 480 213 8 71 525 77 539 1.38e-141 419
Msa0247340 MtrunA17_Chr1g0192331 45.076 528 249 15 27 525 13 528 6.55e-141 417
Msa0247340 MtrunA17_Chr8g0391311 46.667 480 214 8 71 525 79 541 2.54e-140 416
Msa0247340 MtrunA17_Chr4g0011791 44.592 527 248 10 20 525 6 509 3.08e-140 414
Msa0247340 MtrunA17_Chr8g0354901 45.455 451 225 5 86 525 141 581 5.82e-138 411
Msa0247340 MtrunA17_Chr4g0069881 45.351 441 224 8 92 525 105 535 2.31e-135 402
Msa0247340 MtrunA17_Chr8g0354911 46.042 480 207 11 92 527 143 614 6.23e-134 402
Msa0247340 MtrunA17_Chr1g0175661 46.512 473 204 8 92 525 96 558 2.39e-133 398
Msa0247340 MtrunA17_Chr3g0080381 46.089 473 215 8 92 525 157 628 3.33e-133 400
Msa0247340 MtrunA17_Chr3g0079351 48.786 412 204 6 118 525 119 527 3.10e-132 394
Msa0247340 MtrunA17_Chr3g0079341 49.275 414 199 7 118 525 119 527 4.07e-132 394
Msa0247340 MtrunA17_Chr1g0195301 45.267 486 216 10 80 525 80 555 2.17e-131 393
Msa0247340 MtrunA17_Chr1g0195321 45.267 486 216 10 80 525 80 555 2.17e-131 393
Msa0247340 MtrunA17_Chr1g0195331 45.473 486 215 10 80 525 80 555 2.88e-131 393
Msa0247340 MtrunA17_Chr3g0079361 48.792 414 201 7 118 525 119 527 3.28e-130 389
Msa0247340 MtrunA17_Chr4g0011751 46.552 406 197 5 130 525 94 489 6.32e-130 387
Msa0247340 MtrunA17_Chr7g0269511 46.055 469 213 10 92 525 101 564 3.76e-129 388
Msa0247340 MtrunA17_Chr7g0269531 41.935 527 261 11 34 525 49 565 5.64e-129 387
Msa0247340 MtrunA17_Chr3g0080391 42.667 450 239 6 86 525 134 574 1.04e-128 387
Msa0247340 MtrunA17_Chr3g0090091 48.426 413 206 6 118 525 118 528 1.06e-127 383
Msa0247340 MtrunA17_Chr1g0195351 44.856 486 216 11 80 525 80 553 1.53e-126 380
Msa0247340 MtrunA17_Chr1g0194091 43.041 467 228 9 92 525 108 569 3.65e-125 378
Msa0247340 MtrunA17_Chr4g0018371 47.525 404 203 7 130 525 137 539 1.20e-123 373
Msa0247340 MtrunA17_Chr7g0269521 46.637 446 191 9 122 525 122 562 1.91e-123 373
Msa0247340 MtrunA17_Chr1g0192321 40.928 474 240 9 86 524 114 582 2.45e-120 366
Msa0247340 MtrunA17_Chr1g0194081 41.794 457 238 9 92 525 112 563 2.19e-119 363
Msa0247340 MtrunA17_Chr4g0069891 40.524 496 261 10 49 525 113 593 2.35e-116 356
Msa0247340 MtrunA17_Chr7g0272151 40.977 471 241 8 86 524 117 582 3.89e-116 355
Msa0247340 MtrunA17_Chr8g0345211 43.488 453 231 8 86 521 134 578 2.86e-115 353
Msa0247340 MtrunA17_Chr1g0195311 57.040 277 114 3 252 525 40 314 2.94e-113 338
Msa0247340 MtrunA17_Chr7g0270691 35.560 509 299 9 36 525 51 549 1.10e-112 345
Msa0247340 MtrunA17_Chr1g0192311 39.912 456 247 8 86 521 118 566 4.82e-112 344
Msa0247340 MtrunA17_Chr1g0192281 39.912 456 247 8 86 521 118 566 4.82e-112 344
Msa0247340 MtrunA17_Chr4g0000121 39.207 454 253 7 86 521 105 553 1.40e-110 340
Msa0247340 MtrunA17_Chr1g0192301 38.987 454 254 7 86 521 123 571 3.28e-109 337
Msa0247340 MtrunA17_Chr7g0270661 39.535 473 237 11 92 527 108 568 1.06e-105 328
Msa0247340 MtrunA17_Chr7g0270671 39.535 473 237 11 92 527 108 568 1.06e-105 328
Msa0247340 MtrunA17_Chr2g0295531 35.758 495 296 8 38 522 61 543 2.74e-105 328
Msa0247340 MtrunA17_Chr7g0270651 38.819 474 239 11 92 527 108 568 8.70e-103 320
Msa0247340 MtrunA17_Chr2g0302001 52.239 268 124 2 258 525 174 437 9.55e-102 313
Msa0247340 MtrunA17_Chr2g0301931 53.521 284 127 4 242 525 14 292 1.04e-99 303
Msa0247340 MtrunA17_Chr4g0067601 37.170 417 238 6 130 524 157 571 1.84e-95 301
Msa0247340 MtrunA17_Chr4g0067611 36.471 425 246 6 122 524 149 571 1.89e-95 301
Msa0247340 MtrunA17_Chr7g0270631 39.238 446 231 8 92 503 96 535 2.13e-95 313
Msa0247340 MtrunA17_Chr7g0270631 36.117 479 257 11 92 527 644 1116 2.95e-85 285
Msa0247340 MtrunA17_Chr8g0384121 37.660 470 230 13 92 524 120 563 3.40e-94 298
Msa0247340 MtrunA17_Chr2g0295551 35.332 467 259 7 86 524 112 563 4.72e-94 297
Msa0247340 MtrunA17_Chr8g0380581 43.620 337 178 6 192 522 43 373 1.94e-91 284
Msa0247340 MtrunA17_Chr7g0234711 57.576 231 97 1 296 525 39 269 1.14e-89 276
Msa0247340 MtrunA17_Chr3g0129921 38.372 430 219 11 130 524 145 563 1.02e-87 281
Msa0247340 MtrunA17_Chr2g0295541 32.596 497 263 7 86 524 112 594 1.15e-84 273
Msa0247340 MtrunA17_Chr5g0437831 39.669 363 208 7 171 525 24 383 2.43e-84 266
Msa0247340 MtrunA17_Chr2g0299431 55.738 244 102 4 182 423 22 261 4.33e-78 246
Msa0247340 MtrunA17_Chr2g0334111 34.985 323 195 5 204 525 15 323 3.58e-69 225
Msa0247340 MtrunA17_Chr7g0268241 37.821 312 182 4 215 525 50 350 3.03e-68 223
Msa0247340 MtrunA17_Chr7g0271381 34.590 451 256 12 95 525 125 556 4.37e-68 229
Msa0247340 MtrunA17_Chr7g0258341 38.782 312 169 5 215 516 90 389 2.80e-61 206
Msa0247340 MtrunA17_Chr1g0194311 34.365 323 187 7 202 514 61 368 2.64e-52 182
Msa0247340 MtrunA17_Chr6g0453551 33.115 305 180 5 215 509 6 296 6.30e-52 179
Msa0247340 MtrunA17_Chr6g0466951 34.740 308 174 6 185 487 43 328 1.17e-50 177
Msa0247340 MtrunA17_Chr6g0466961 35.612 278 156 4 215 487 40 299 5.76e-50 174
Msa0247340 MtrunA17_Chr6g0487101 33.333 327 189 8 199 514 72 380 3.17e-49 174
Msa0247340 MtrunA17_Chr7g0265201 34.365 323 184 7 199 514 84 385 1.06e-48 172
Msa0247340 MtrunA17_Chr8g0389771 31.909 351 197 9 188 514 45 377 1.19e-48 172
Msa0247340 MtrunA17_Chr5g0446301 35.294 306 171 6 221 514 67 357 8.45e-47 167
Msa0247340 MtrunA17_Chr8g0391261 51.079 139 68 0 387 525 28 166 2.31e-46 159
Msa0247340 MtrunA17_Chr7g0217941 31.683 303 183 4 217 509 8 296 4.63e-46 164
Msa0247340 MtrunA17_Chr2g0294321 32.710 321 195 6 201 515 42 347 2.54e-45 162
Msa0247340 MtrunA17_Chr1g0161731 34.191 272 159 4 223 487 57 315 5.19e-45 161
Msa0247340 MtrunA17_Chr8g0351871 32.808 317 178 8 215 517 33 328 5.34e-42 153
Msa0247340 MtrunA17_Chr4g0070051 32.399 321 184 11 206 514 44 343 8.93e-40 147
Msa0247340 MtrunA17_Chr5g0399221 29.560 318 197 6 212 517 60 362 7.15e-39 145
Msa0247340 MtrunA17_Chr2g0295851 30.745 322 191 9 201 515 41 337 3.29e-36 137
Msa0247340 MtrunA17_Chr5g0440871 31.935 310 185 7 208 514 32 318 2.05e-35 135
Msa0247340 MtrunA17_Chr4g0037751 28.367 349 218 9 183 514 28 361 5.37e-34 132
Msa0247340 MtrunA17_Chr5g0420831 28.086 324 204 7 170 476 15 326 4.56e-31 124
Msa0247340 MtrunA17_Chr7g0234731 38.333 180 105 5 118 294 138 314 1.48e-30 121
Msa0247340 MtrunA17_Chr8g0391281 35.458 251 120 8 71 296 77 310 3.77e-30 120
Msa0247340 MtrunA17_Chr5g0440901 38.562 153 84 3 307 459 1 143 9.57e-29 111
Msa0247340 MtrunA17_Chr6g0459781 35.519 183 106 3 204 376 2 182 1.72e-28 112
Msa0247340 MtrunA17_Chr5g0437821 38.519 135 82 1 328 461 4 138 1.49e-26 104
Msa0247340 MtrunA17_Chr4g0025841 28.968 252 162 3 208 459 30 264 8.25e-26 106
Msa0247340 MtrunA17_Chr2g0314691 33.166 199 114 5 319 514 19 201 1.46e-24 101
Msa0247340 MtrunA17_Chr7g0265161 33.908 174 82 4 289 457 14 159 1.01e-21 94.4
Msa0247340 MtrunA17_Chr6g0460141 37.857 140 79 4 243 374 5 144 1.15e-19 85.9
Msa0247340 MtrunA17_Chr5g0440891 30.636 173 113 2 208 380 41 206 3.33e-17 80.5
Msa0247340 MtrunA17_Chr6g0459791 35.385 130 61 5 391 514 4 116 2.97e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0247340 AT4G33220.1 63.931 524 160 5 25 525 6 523 0.0 709
Msa0247340 AT3G43270.1 62.791 516 175 5 26 525 11 525 0.0 684
Msa0247340 AT4G33220.2 66.667 402 112 1 146 525 1 402 0.0 585
Msa0247340 AT5G53370.1 46.538 520 238 11 41 525 71 585 2.72e-153 451
Msa0247340 AT5G53370.2 46.538 520 238 11 41 525 107 621 1.01e-152 451
Msa0247340 AT3G05620.1 48.132 455 210 6 87 526 99 542 3.11e-149 439
Msa0247340 AT3G49220.1 42.403 566 275 10 5 527 41 598 1.74e-145 431
Msa0247340 AT1G11580.1 46.484 512 244 9 30 521 52 553 4.47e-145 429
Msa0247340 AT3G49220.3 42.403 566 275 10 5 527 86 643 1.07e-144 431
Msa0247340 AT1G11580.2 46.484 512 244 9 30 521 73 574 1.49e-144 428
Msa0247340 AT1G53830.1 48.283 466 210 7 88 525 125 587 1.11e-139 416
Msa0247340 AT2G45220.1 45.618 502 240 14 35 525 32 511 8.10e-137 406
Msa0247340 AT3G14310.1 46.398 472 218 5 88 525 122 592 1.37e-136 408
Msa0247340 AT4G02320.1 45.614 456 212 7 92 525 77 518 4.37e-136 404
Msa0247340 AT2G26440.1 42.857 518 266 10 32 525 36 547 2.20e-134 401
Msa0247340 AT1G23200.1 43.281 506 224 8 59 525 73 554 3.01e-132 395
Msa0247340 AT4G02330.1 44.561 478 219 10 92 525 96 571 3.53e-132 396
Msa0247340 AT4G02300.1 43.681 451 226 6 92 525 93 532 2.33e-131 392
Msa0247340 AT3G05610.1 41.141 491 265 5 48 525 86 565 4.00e-129 391
Msa0247340 AT3G10720.2 44.397 473 218 10 92 525 149 615 1.11e-128 389
Msa0247340 AT2G26450.1 47.115 416 202 6 122 525 202 611 1.81e-128 388
Msa0247340 AT5G51490.1 44.956 456 232 6 81 525 89 536 8.92e-128 384
Msa0247340 AT1G02810.1 58.095 315 126 4 215 525 265 577 1.23e-127 385
Msa0247340 AT5G04970.1 39.640 555 276 12 10 525 86 620 7.35e-127 384
Msa0247340 AT5G27870.1 40.244 492 266 8 48 525 85 562 4.46e-126 385
Msa0247340 AT3G60730.1 44.917 423 206 5 130 525 97 519 2.01e-125 377
Msa0247340 AT5G51500.1 45.536 448 231 7 86 525 98 540 1.26e-124 375
Msa0247340 AT3G59010.1 45.916 453 203 9 91 525 100 528 4.84e-124 374
Msa0247340 AT2G43050.1 43.919 444 217 7 91 525 96 516 1.18e-123 372
Msa0247340 AT1G53840.1 41.048 458 238 6 86 519 132 581 2.02e-122 372
Msa0247340 AT2G47550.1 44.540 467 219 8 92 525 99 558 1.86e-121 368
Msa0247340 AT5G49180.1 46.005 413 201 7 129 521 156 566 2.44e-121 368
Msa0247340 AT3G10710.1 41.756 467 247 9 69 525 110 561 3.28e-121 367
Msa0247340 AT5G04960.1 40.272 514 269 10 31 523 66 562 5.23e-121 367
Msa0247340 AT3G47400.1 42.169 498 259 10 41 525 113 594 3.01e-120 366
Msa0247340 AT4G33230.1 40.984 488 258 10 56 525 131 606 4.93e-119 363
Msa0247340 AT3G14300.1 43.080 448 230 8 86 515 519 959 5.41e-115 363
Msa0247340 AT4G00190.1 42.661 436 223 7 92 525 64 474 1.90e-113 345
Msa0247340 AT3G10720.1 58.462 260 107 1 266 525 1 259 6.06e-113 336
Msa0247340 AT4G03930.1 44.417 403 212 5 130 525 127 524 1.18e-110 339
Msa0247340 AT3G27980.1 44.836 397 209 4 133 525 107 497 1.69e-109 335
Msa0247340 AT1G11590.1 45.161 403 209 5 130 525 127 524 2.58e-109 336
Msa0247340 AT5G20860.2 42.377 446 235 10 90 525 105 538 1.02e-108 335
Msa0247340 AT3G06830.1 41.568 421 214 8 130 523 151 566 9.10e-108 333
Msa0247340 AT4G15980.1 45.251 358 186 5 175 523 344 700 7.03e-104 327
Msa0247340 AT4G15980.2 45.251 358 186 5 175 523 354 710 1.70e-103 326
Msa0247340 AT1G11370.1 51.406 249 121 0 207 455 38 286 1.15e-87 272
Msa0247340 AT5G09760.1 44.062 320 154 7 210 513 236 546 2.70e-87 280
Msa0247340 AT5G09760.2 43.925 321 155 7 209 513 261 572 5.81e-87 279
Msa0247340 AT5G20860.1 38.515 431 215 9 90 510 105 495 2.10e-85 273
Msa0247340 AT5G64640.1 36.407 423 226 10 130 518 189 602 2.27e-83 271
Msa0247340 AT2G47030.1 41.499 347 186 4 194 525 244 588 3.75e-82 267
Msa0247340 AT2G47040.1 42.442 344 184 4 194 525 254 595 2.52e-81 265
Msa0247340 AT3G62170.1 39.155 355 191 4 194 525 236 588 3.72e-77 254
Msa0247340 AT1G05310.1 36.774 310 174 5 215 514 91 388 1.77e-57 196
Msa0247340 AT2G36710.1 35.577 312 182 5 215 519 91 390 4.14e-55 191
Msa0247340 AT2G36700.1 34.441 331 197 6 189 514 18 333 5.70e-50 175
Msa0247340 AT5G19730.1 33.993 303 174 6 223 514 94 381 1.00e-49 176
Msa0247340 AT3G29090.1 33.115 305 180 5 215 509 7 297 3.93e-49 172
Msa0247340 AT3G17060.1 31.707 328 195 7 199 516 30 338 3.90e-48 170
Msa0247340 AT1G44980.1 45.596 193 101 1 195 383 54 246 4.66e-47 164
Msa0247340 AT2G21610.1 33.444 302 179 7 215 514 51 332 1.19e-45 164
Msa0247340 AT2G21610.2 33.444 302 179 7 215 514 56 337 1.26e-45 164
Msa0247340 AT3G24130.1 34.507 284 162 5 215 487 34 304 3.72e-44 159
Msa0247340 AT5G18990.1 34.035 285 164 5 214 487 28 299 3.48e-42 154
Msa0247340 AT5G07430.1 29.973 367 220 10 168 514 6 355 2.22e-41 152
Msa0247340 AT5G55590.1 32.070 343 202 7 184 514 55 378 6.40e-41 152
Msa0247340 AT5G47500.1 30.556 324 197 7 203 514 50 357 1.24e-40 150
Msa0247340 AT5G55590.2 33.449 287 163 6 184 458 55 325 4.48e-40 148
Msa0247340 AT5G61680.1 30.747 348 198 11 189 514 32 358 3.53e-39 146
Msa0247340 AT5G26810.1 30.960 323 191 7 208 514 27 333 3.57e-39 146
Msa0247340 AT1G69940.1 26.902 368 238 8 162 514 4 355 3.20e-37 141
Msa0247340 AT5G07420.1 30.094 319 200 7 202 514 54 355 3.99e-37 141
Msa0247340 AT2G19150.1 31.646 316 190 7 215 521 41 339 1.47e-36 139
Msa0247340 AT5G07410.1 26.902 368 238 8 162 514 4 355 2.00e-36 139
Msa0247340 AT2G47280.1 30.818 318 191 8 208 514 28 327 4.39e-35 134
Msa0247340 AT3G49220.2 30.240 334 182 11 5 295 86 411 7.43e-33 130
Msa0247340 AT2G19150.2 32.677 254 148 6 215 459 41 280 2.26e-31 123

Find 127 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTCCATTCTTTCTCAATT+TGG 0.219429 2_2:+29383133 Msa0247340:CDS
TATGCTGAGTACATGAATTA+TGG 0.225681 2_2:+29388769 Msa0247340:CDS
CAATTTGGTGGTGCTGGATT+TGG 0.235870 2_2:+29383148 Msa0247340:CDS
TGTGTGAAGGTATCTAAATT+AGG 0.258690 2_2:-29384878 None:intergenic
CTTTCTCAATTTGGTGGTGC+TGG 0.290029 2_2:+29383142 Msa0247340:CDS
CTGCCAGCATTGACATCATT+TGG 0.292322 2_2:-29384835 None:intergenic
AATTTATTGAGGGGAATCTA+TGG 0.320153 2_2:+29388881 Msa0247340:CDS
GATTGAATAAACGAGTTAAA+TGG 0.323496 2_2:+29388803 Msa0247340:CDS
GAACAAGAACATGCAAGATT+TGG 0.327961 2_2:-29388956 None:intergenic
TCGACGGTTGGACCACGTTT+AGG 0.337097 2_2:+29385191 Msa0247340:CDS
ATATCGTTTCATGCTATAAT+CGG 0.339042 2_2:-29385047 None:intergenic
AATTCCACTTATACATATCT+TGG 0.358083 2_2:+29388631 Msa0247340:CDS
TTCTAGTTGGTTGGTGGGAG+AGG 0.359448 2_2:+29388986 Msa0247340:three_prime_UTR
GTGTGAAGGTATCTAAATTA+GGG 0.360779 2_2:-29384877 None:intergenic
ATCTGAATTTGAGTTTCTTA+AGG 0.368379 2_2:+29383051 Msa0247340:CDS
AAAAGGTCGATTTCCTTCTT+GGG 0.371455 2_2:+29384910 Msa0247340:CDS
GATCCACCAAAAGGCCCTTT+TGG 0.375955 2_2:+29389232 Msa0247340:three_prime_UTR
TTCCACTCTAGCCACCCTTC+TGG 0.377303 2_2:-29388718 None:intergenic
TTGTTCTTGATTGTTCTAGT+TGG 0.384166 2_2:+29388973 Msa0247340:three_prime_UTR
ATGCTGAGTACATGAATTAT+GGG 0.385657 2_2:+29388770 Msa0247340:CDS
TTTCCTCTGATGCACTTACT+TGG 0.385665 2_2:+29383221 Msa0247340:CDS
CAGCGGTAATATTGCAGAAC+TGG 0.386031 2_2:-29388585 None:intergenic
TTTGAACCAAAAGGGCCTTT+TGG 0.386921 2_2:-29389238 None:intergenic
AGAAAGCTCTTGCAAGCAAA+TGG 0.389703 2_2:+29384947 Msa0247340:CDS
TTGAAATCAAGAAGAAGAAA+TGG 0.391609 2_2:+29385107 Msa0247340:CDS
ATGAATGCCACAATTATTAC+TGG 0.395362 2_2:+29385154 Msa0247340:CDS
GAGAAACCAGTTGGTTCGTT+AGG 0.397963 2_2:-29388559 None:intergenic
GCTACTGCTTGGTGCTTCTC+AGG 0.409121 2_2:-29388307 None:intergenic
TCCATTCTTTCTCAATTTGG+TGG 0.412634 2_2:+29383136 Msa0247340:CDS
CTGCAATATTACCGCTGATT+CGG 0.414847 2_2:+29388591 Msa0247340:CDS
AATCCGTCCATGCATGTCTC+TGG 0.417639 2_2:-29384764 None:intergenic
ATAAAAGGCTTTGAACCAAA+AGG 0.418446 2_2:-29389247 None:intergenic
TTGCTCCATCTGAATTTGTT+GGG 0.422448 2_2:+29383074 Msa0247340:CDS
AAATTCAGATGCTGCTTTAG+TGG 0.422910 2_2:-29383038 None:intergenic
AATCTATGGTTGCCCACAAC+AGG 0.423059 2_2:+29388895 Msa0247340:CDS
CCACAATTATTACTGGTAAT+CGG 0.426884 2_2:+29385161 Msa0247340:CDS
GTTCTTGAATATTGCTTCCA+TGG 0.429955 2_2:-29388658 None:intergenic
ATGAATTATGGGTCTGGAGC+TGG 0.430214 2_2:+29388781 Msa0247340:CDS
TGTGTGTGTGCAGCTGTTAG+TGG 0.434682 2_2:+29388238 Msa0247340:intron
CATGTTATGAGAGTGGGTAT+TGG 0.447234 2_2:-29382962 None:intergenic
GAAAGCTCTTGCAAGCAAAT+GGG 0.448825 2_2:+29384948 Msa0247340:CDS
ACGTTTAGGTCAGCTACATT+TGG 0.451586 2_2:+29385205 Msa0247340:CDS
TACAGTGACACAATTTATTG+AGG 0.451745 2_2:+29388870 Msa0247340:CDS
GTTGCTCCATCTGAATTTGT+TGG 0.452464 2_2:+29383073 Msa0247340:CDS
TGGAATTAACCGACGGAAGA+AGG 0.456465 2_2:-29388615 None:intergenic
TGTGCAGCTGTTAGTGGTAG+AGG 0.469428 2_2:+29388244 Msa0247340:intron
ACTTGTTTCAAGCTTGAAGT+AGG 0.473921 2_2:+29389136 Msa0247340:three_prime_UTR
GTAGGTAAGCATAATAGTAC+TGG 0.474157 2_2:+29384692 Msa0247340:intron
AGAAACCAGTTGGTTCGTTA+GGG 0.476702 2_2:-29388558 None:intergenic
TCTTGATTGTTCTAGTTGGT+TGG 0.477318 2_2:+29388977 Msa0247340:three_prime_UTR
AGAAAAGAAAGAGAGTTAGT+AGG 0.479692 2_2:-29382880 None:intergenic
TGGGAGAGGTAAATTAATGA+TGG 0.482835 2_2:+29389000 Msa0247340:three_prime_UTR
GAGAGTCAATTAGTGTCTAC+TGG 0.485673 2_2:+29384806 Msa0247340:CDS
TTAGTAGGTTCCACTACGTT+GGG 0.486048 2_2:-29382865 None:intergenic
TTCAGAGAATGCAAAATAAG+TGG 0.490025 2_2:+29388421 Msa0247340:CDS
AATAAACGAGTTAAATGGCC+AGG 0.493857 2_2:+29388808 Msa0247340:CDS
GTAGCATTCACTGCTGGACT+AGG 0.495573 2_2:+29388919 Msa0247340:CDS
TTTGTTGAAGAAAGAGCCAT+TGG 0.496653 2_2:-29382914 None:intergenic
GATTGTTCTAGTTGGTTGGT+GGG 0.499410 2_2:+29388981 Msa0247340:three_prime_UTR
AATTCAGATGCTGCTTTAGT+GGG 0.502247 2_2:-29383037 None:intergenic
ACCACCAAATTGAGAAAGAA+TGG 0.519567 2_2:-29383137 None:intergenic
TAAAAGGCTTTGAACCAAAA+GGG 0.519636 2_2:-29389246 None:intergenic
GATGTTGTCGTTGCTACCGA+TGG 0.520194 2_2:+29384980 Msa0247340:CDS
GTCGTTGCTACCGATGGGAG+CGG 0.520579 2_2:+29384986 Msa0247340:CDS
ACATGCATGGACGGATTTGA+AGG 0.522599 2_2:+29384770 Msa0247340:CDS
TGATTGTTCTAGTTGGTTGG+TGG 0.527692 2_2:+29388980 Msa0247340:three_prime_UTR
AAAGACCCTAACGAACCAAC+TGG 0.528989 2_2:+29388553 Msa0247340:CDS
GGCCAGAAGGGTGGCTAGAG+TGG 0.530386 2_2:+29388716 Msa0247340:CDS
ACAGTGACACAATTTATTGA+GGG 0.533042 2_2:+29388871 Msa0247340:CDS
TATCGTTTCATGCTATAATC+GGG 0.533377 2_2:-29385046 None:intergenic
GAGTACATGAATTATGGGTC+TGG 0.534865 2_2:+29388775 Msa0247340:CDS
CGGATCTTAGTGCTACTGCT+TGG 0.538155 2_2:-29388318 None:intergenic
ACAGGTGTAGCATTCACTGC+TGG 0.547427 2_2:+29388913 Msa0247340:CDS
GTCGCCGCTGATCCACCAAA+AGG 0.547760 2_2:+29389223 Msa0247340:three_prime_UTR
CTTGTTTCAAGCTTGAAGTA+GGG 0.550651 2_2:+29389137 Msa0247340:three_prime_UTR
AGACCAAGTAAGTGCATCAG+AGG 0.559656 2_2:-29383224 None:intergenic
AACTGGATTGAGAAACCAGT+TGG 0.560013 2_2:-29388568 None:intergenic
GCATTGACATCATTTGGCTT+AGG 0.562958 2_2:-29384829 None:intergenic
GGTAAAATTCCCGCTCCCAT+CGG 0.563517 2_2:-29384996 None:intergenic
CAGTGACACAATTTATTGAG+GGG 0.568743 2_2:+29388872 Msa0247340:CDS
AAGCCAAATGATGTCAATGC+TGG 0.573161 2_2:+29384832 Msa0247340:CDS
TGATTCGGACCTTCTTCCGT+CGG 0.577882 2_2:+29388606 Msa0247340:CDS
TCGTTGCTACCGATGGGAGC+GGG 0.578585 2_2:+29384987 Msa0247340:CDS
TCTTCCAAGATATGTATAAG+TGG 0.580708 2_2:-29388635 None:intergenic
GTTAGTAGGTTCCACTACGT+TGG 0.580924 2_2:-29382866 None:intergenic
GGAGCACTAGCACATAGTGC+TGG 0.581300 2_2:-29383016 None:intergenic
AAATGGAATCTCATGATGGT+CGG 0.582827 2_2:+29385124 Msa0247340:CDS
ATCGGAGCTTCATCGACGGT+TGG 0.586004 2_2:+29385179 Msa0247340:CDS
CTCATATAAGTGATGTGTTG+AGG 0.589730 2_2:+29388695 Msa0247340:CDS
ATGTTGTCGTTGCTACCGAT+GGG 0.591046 2_2:+29384981 Msa0247340:CDS
CCGATTACCAGTAATAATTG+TGG 0.594114 2_2:-29385161 None:intergenic
AATCTCATGATGGTCGGAGA+TGG 0.595084 2_2:+29385130 Msa0247340:CDS
GAAGGGTGGCTAGAGTGGAA+TGG 0.595880 2_2:+29388721 Msa0247340:CDS
GACGGATTTGAAGGCACAAG+TGG 0.597312 2_2:+29384779 Msa0247340:CDS
AGTGAATGCTACACCTGTTG+TGG 0.597942 2_2:-29388908 None:intergenic
GTGCAGCTGTTAGTGGTAGA+GGG 0.602209 2_2:+29388245 Msa0247340:intron
AAAGCTCTTGCAAGCAAATG+GGG 0.602289 2_2:+29384949 Msa0247340:CDS
GAAGAAATGGAATCTCATGA+TGG 0.602603 2_2:+29385120 Msa0247340:CDS
GGGACAGTGCAAGATGTAGT+TGG 0.605878 2_2:+29383094 Msa0247340:CDS
CTCTCAGTATTCTATCGATG+TGG 0.607522 2_2:+29388349 Msa0247340:CDS
AGTGATGTGTTGAGGCCAGA+AGG 0.614258 2_2:+29388703 Msa0247340:CDS
TATGTGCATGTTATGAGAGT+GGG 0.614889 2_2:-29382968 None:intergenic
CGGAAGAAGGTCCGAATCAG+CGG 0.621096 2_2:-29388602 None:intergenic
GTGAATGCTACACCTGTTGT+GGG 0.624429 2_2:-29388907 None:intergenic
TCATTCATAATGTGATACCC+TGG 0.629813 2_2:-29388826 None:intergenic
ATATTCAAAGCCCAACGTAG+TGG 0.631442 2_2:+29382855 None:intergenic
AATCCAGAGACATGCATGGA+CGG 0.632225 2_2:+29384761 Msa0247340:CDS
TTTGGGATTCTGAGCAGCAG+AGG 0.637374 2_2:-29383248 None:intergenic
ATAAACGAGTTAAATGGCCA+GGG 0.640087 2_2:+29388809 Msa0247340:CDS
GTATGTGCATGTTATGAGAG+TGG 0.642767 2_2:-29382969 None:intergenic
TACAAATCCAGAGACATGCA+TGG 0.652603 2_2:+29384757 Msa0247340:CDS
GGGAGAGGTAAATTAATGAT+GGG 0.652801 2_2:+29389001 Msa0247340:three_prime_UTR
GTGATGTGTTGAGGCCAGAA+GGG 0.653931 2_2:+29388704 Msa0247340:CDS
ATGCACCGCATCCATCACCT+TGG 0.654708 2_2:-29385017 None:intergenic
ATACATATCTTGGAAGACCA+TGG 0.655553 2_2:+29388641 Msa0247340:CDS
AAATTAATGAAATTCAACAC+TGG 0.655708 2_2:-29389031 None:intergenic
ACTGTCCCAACAAATTCAGA+TGG 0.656011 2_2:-29383079 None:intergenic
GAATACTGAGAGGTCCGAGT+CGG 0.663579 2_2:-29388338 None:intergenic
TCTGCTGCTCAGAATCCCAA+AGG 0.671590 2_2:+29383250 Msa0247340:CDS
TATGTGATATACGTAAAGAG+AGG 0.672031 2_2:+29385067 Msa0247340:CDS
AGTAGCACTAAGATCCGACT+CGG 0.672727 2_2:+29388324 Msa0247340:CDS
TGAACTCTGATGTGAGAACA+TGG 0.674307 2_2:+29384720 Msa0247340:CDS
GTATAAGTGGAATTAACCGA+CGG 0.679637 2_2:-29388622 None:intergenic
GGTAATCGGAGCTTCATCGA+CGG 0.685148 2_2:+29385175 Msa0247340:CDS
ATGTGTTGAGGCCAGAAGGG+TGG 0.717629 2_2:+29388707 Msa0247340:CDS
CACATCGATAGAATACTGAG+AGG 0.736335 2_2:-29388348 None:intergenic
AAATGTAGCTGACCTAAACG+TGG 0.753682 2_2:-29385203 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACACTAATTTTTTATTTTTT+TGG + chr2_2:29384155-29384174 Msa0247340:intron 10.0%
!! AATAAAAATATAAATACTAG+AGG + chr2_2:29384405-29384424 Msa0247340:intron 10.0%
!!! TTTCCATAAAAATAAAATTT+TGG + chr2_2:29385988-29386007 Msa0247340:intron 10.0%
!!! ATTCTTTTATGTAAAAAATT+TGG + chr2_2:29386481-29386500 Msa0247340:intron 10.0%
!!! TTCTTTTATGTAAAAAATTT+GGG + chr2_2:29386482-29386501 Msa0247340:intron 10.0%
!! TATAAAAAAGTTTAATTCAA+AGG - chr2_2:29386754-29386773 None:intergenic 10.0%
!! AATAAGATAATAAATGATTA+AGG + chr2_2:29387612-29387631 Msa0247340:intron 10.0%
!! ATAAGATAATAAATGATTAA+GGG + chr2_2:29387613-29387632 Msa0247340:intron 10.0%
!! AATAAGATAATAAATGATTA+AGG + chr2_2:29387612-29387631 Msa0247340:intron 10.0%
!! ATAAGATAATAAATGATTAA+GGG + chr2_2:29387613-29387632 Msa0247340:intron 10.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_2:29383970-29383989 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_2:29383969-29383988 Msa0247340:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_2:29383993-29384012 Msa0247340:intron 15.0%
!! CTAAAATAATGACAATTAAA+GGG - chr2_2:29384262-29384281 None:intergenic 15.0%
!!! TCTAAAATAATGACAATTAA+AGG - chr2_2:29384263-29384282 None:intergenic 15.0%
!!! TTGTAAACGAAATAATTTTA+TGG + chr2_2:29384431-29384450 Msa0247340:intron 15.0%
!!! GATCCAAAATTTTATTTTTA+TGG - chr2_2:29385994-29386013 None:intergenic 15.0%
!!! TATTAAATTGATAGTTGAAA+GGG - chr2_2:29386106-29386125 None:intergenic 15.0%
!!! ATATTAAATTGATAGTTGAA+AGG - chr2_2:29386107-29386126 None:intergenic 15.0%
!!! ATACTTCGTTAATTTTTTTT+TGG + chr2_2:29386346-29386365 Msa0247340:intron 15.0%
!! TTTACATAAAAGAATAACTA+CGG - chr2_2:29386476-29386495 None:intergenic 15.0%
!!! TCTTTTATGTAAAAAATTTG+GGG + chr2_2:29386483-29386502 Msa0247340:intron 15.0%
!! TAATGTATCTAGTTAAAAAT+TGG + chr2_2:29386819-29386838 Msa0247340:intron 15.0%
!!! ACTCTGTATTTTTTTTTTAT+AGG + chr2_2:29386908-29386927 Msa0247340:intron 15.0%
!!! CTCTGTATTTTTTTTTTATA+GGG + chr2_2:29386909-29386928 Msa0247340:intron 15.0%
!!! TCTGTATTTTTTTTTTATAG+GGG + chr2_2:29386910-29386929 Msa0247340:intron 15.0%
!! AAGAAATGTGAATTAAAATT+CGG - chr2_2:29387399-29387418 None:intergenic 15.0%
!!! TTCTTTTTATTAGTTTTGAT+AGG + chr2_2:29387540-29387559 Msa0247340:intron 15.0%
!!! AAATATGGACTTTAAAATAT+GGG + chr2_2:29387578-29387597 Msa0247340:intron 15.0%
!! TATAGAAAAAAGATAGATAT+TGG + chr2_2:29387639-29387658 Msa0247340:intron 15.0%
!! TATAGAAAAAAGATAGATAT+TGG + chr2_2:29387639-29387658 Msa0247340:intron 15.0%
!!! AAATTTTGATTATTGTAATG+TGG + chr2_2:29389109-29389128 Msa0247340:three_prime_UTR 15.0%
!!! ATTCATTATTTTCTCATATT+TGG + chr2_2:29389200-29389219 Msa0247340:three_prime_UTR 15.0%
!!! TTCATTATTTTCTCATATTT+GGG + chr2_2:29389201-29389220 Msa0247340:three_prime_UTR 15.0%
!! ATCTTCGAGTATTAATTAAA+AGG + chr2_2:29383331-29383350 Msa0247340:intron 20.0%
!!! TAATTAATTTGTTACCACTT+TGG + chr2_2:29383367-29383386 Msa0247340:intron 20.0%
!!! AAAAGTTTATATCTTTTCCA+GGG + chr2_2:29383438-29383457 Msa0247340:intron 20.0%
!!! AGTGATAACTATTTTTTCAT+GGG - chr2_2:29383582-29383601 None:intergenic 20.0%
!!! AAGTGATAACTATTTTTTCA+TGG - chr2_2:29383583-29383602 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_2:29383979-29383998 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr2_2:29384056-29384075 Msa0247340:intron 20.0%
!!! CATTTTGAAACAAATGTTTT+TGG + chr2_2:29384096-29384115 Msa0247340:intron 20.0%
!! AAAAAGAGAAACAAAAAGTT+AGG + chr2_2:29384518-29384537 Msa0247340:intron 20.0%
!! AAAAGAGAAACAAAAAGTTA+GGG + chr2_2:29384519-29384538 Msa0247340:intron 20.0%
!! AACTGTTATACTATAGTTAT+TGG - chr2_2:29384564-29384583 None:intergenic 20.0%
!!! TTTTGGTCATTTTTAAAGAA+TGG + chr2_2:29384627-29384646 Msa0247340:intron 20.0%
!!! CAATTACTTCATTTTTATCA+TGG + chr2_2:29385531-29385550 Msa0247340:intron 20.0%
!! CACTTCAATTAATGTATATT+TGG - chr2_2:29385658-29385677 None:intergenic 20.0%
!! AGATAATATTAGGTGTATAT+GGG + chr2_2:29385711-29385730 Msa0247340:intron 20.0%
!! AAAAAAAGAGATATGAGAAT+GGG - chr2_2:29385803-29385822 None:intergenic 20.0%
!! TAAAAAAAGAGATATGAGAA+TGG - chr2_2:29385804-29385823 None:intergenic 20.0%
!!! TAAAATTTTGGATCAATTTG+TGG + chr2_2:29386000-29386019 Msa0247340:intron 20.0%
!! TTAGTAAATATATCTTTCGT+AGG + chr2_2:29386375-29386394 Msa0247340:intron 20.0%
!! AAAAAGTTTAATTCAAAGGT+TGG - chr2_2:29386750-29386769 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAATT+TGG + chr2_2:29386784-29386803 Msa0247340:intron 20.0%
!! CCTATTTATAAGAGAAATTT+GGG + chr2_2:29386785-29386804 Msa0247340:intron 20.0%
!! CCTATTTATAAGAGAAATTT+GGG - chr2_2:29386785-29386804 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAATT+TGG - chr2_2:29386784-29386803 None:intergenic 20.0%
!! ATAGCCTTTAATAATACTAA+AGG - chr2_2:29386994-29387013 None:intergenic 20.0%
!! TCATGTTTACATTGTTTATT+TGG + chr2_2:29387145-29387164 Msa0247340:intron 20.0%
!!! AATTTGACTTGAAAATTTCA+AGG + chr2_2:29387202-29387221 Msa0247340:intron 20.0%
!!! ATTTGACTTGAAAATTTCAA+GGG + chr2_2:29387203-29387222 Msa0247340:intron 20.0%
!! AAAGTTGTATATTTAATGTG+TGG + chr2_2:29387294-29387313 Msa0247340:intron 20.0%
!! AAGTTGTATATTTAATGTGT+GGG + chr2_2:29387295-29387314 Msa0247340:intron 20.0%
!! CTGTTTAAGTATTCTAAATT+AGG - chr2_2:29387351-29387370 None:intergenic 20.0%
!! AGAAATGTGAATTAAAATTC+GGG - chr2_2:29387398-29387417 None:intergenic 20.0%
!!! CTTGCTTAAATATATTTCTA+TGG + chr2_2:29387416-29387435 Msa0247340:intron 20.0%
!!! TTTTATTCACTTTTCTTGTT+TGG + chr2_2:29387455-29387474 Msa0247340:intron 20.0%
!! AGTAAGAATTCTTATATTTG+TGG - chr2_2:29387498-29387517 None:intergenic 20.0%
!!! TATTAGTTTTGATAGGTTTA+TGG + chr2_2:29387547-29387566 Msa0247340:intron 20.0%
!!! ATTAGTTTTGATAGGTTTAT+GGG + chr2_2:29387548-29387567 Msa0247340:intron 20.0%
!!! ATTTTAAAGTCCATATTTGA+TGG - chr2_2:29387576-29387595 None:intergenic 20.0%
!!! CAAATATGGACTTTAAAATA+TGG + chr2_2:29387577-29387596 Msa0247340:intron 20.0%
!! TGTCAAATACTAGTAAAAAA+AGG + chr2_2:29388490-29388509 Msa0247340:CDS 20.0%
!! GTCAAATACTAGTAAAAAAA+GGG + chr2_2:29388491-29388510 Msa0247340:CDS 20.0%
!! AAATTAATGAAATTCAACAC+TGG - chr2_2:29389034-29389053 None:intergenic 20.0%
!!! TTTCTTTACTTTTCTTCCAA+TGG + chr2_2:29382898-29382917 Msa0247340:exon 25.0%
!! ATCTGAATTTGAGTTTCTTA+AGG + chr2_2:29383051-29383070 Msa0247340:CDS 25.0%
!! TATAAACTTTTGCATGATGT+AGG - chr2_2:29383429-29383448 None:intergenic 25.0%
!! CAAAAGTTTATATCTTTTCC+AGG + chr2_2:29383437-29383456 Msa0247340:intron 25.0%
! ATAGTTATTATGCTTGAGAT+TGG - chr2_2:29383637-29383656 None:intergenic 25.0%
!!! TTTTTTTTGGCTCTAATTGT+AGG + chr2_2:29384674-29384693 Msa0247340:intron 25.0%
!! TTTTTGTTCTTTTTGTGTGA+AGG - chr2_2:29384894-29384913 None:intergenic 25.0%
! TTCACACAAAAAGAACAAAA+AGG + chr2_2:29384893-29384912 Msa0247340:CDS 25.0%
! ATATCGTTTCATGCTATAAT+CGG - chr2_2:29385050-29385069 None:intergenic 25.0%
! TTGAAATCAAGAAGAAGAAA+TGG + chr2_2:29385107-29385126 Msa0247340:CDS 25.0%
!! GCTAGAAAAGTTTAACTTAT+GGG - chr2_2:29385409-29385428 None:intergenic 25.0%
!! TGCTAGAAAAGTTTAACTTA+TGG - chr2_2:29385410-29385429 None:intergenic 25.0%
!!! TTTTTTTGTTTGTGATAGTC+AGG + chr2_2:29385436-29385455 Msa0247340:intron 25.0%
!!! TTTTTTGTTTGTGATAGTCA+GGG + chr2_2:29385437-29385456 Msa0247340:intron 25.0%
! AAATTGTGTTAGAAAAGTTC+TGG - chr2_2:29385499-29385518 None:intergenic 25.0%
! CATATACACCTAATATTATC+TGG - chr2_2:29385712-29385731 None:intergenic 25.0%
! CAGATAATATTAGGTGTATA+TGG + chr2_2:29385710-29385729 Msa0247340:intron 25.0%
! CAAATGTAGTAATGTTACAT+TGG - chr2_2:29386179-29386198 None:intergenic 25.0%
! CAATGTAACATTACTACATT+TGG + chr2_2:29386177-29386196 Msa0247340:intron 25.0%
!!! TCGTTAATTTTTTTTTGGAG+AGG + chr2_2:29386351-29386370 Msa0247340:intron 25.0%
!!! ACATTTTAATTGTGAAAGAG+TGG - chr2_2:29386613-29386632 None:intergenic 25.0%
! AATGTTAAAAGCAAAAGTCT+TGG - chr2_2:29386719-29386738 None:intergenic 25.0%
!!! AGACTTTTGCTTTTAACATT+AGG + chr2_2:29386719-29386738 Msa0247340:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG - chr2_2:29386871-29386890 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG - chr2_2:29386866-29386885 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG + chr2_2:29386866-29386885 Msa0247340:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr2_2:29386871-29386890 Msa0247340:intron 25.0%
! AGGACCTTTAGTATTATTAA+AGG + chr2_2:29386987-29387006 Msa0247340:intron 25.0%
!! CAATGTAAACATGAGAATTT+TGG - chr2_2:29387139-29387158 None:intergenic 25.0%
!!! TTCAGAGATACTACTTTTTA+AGG + chr2_2:29387247-29387266 Msa0247340:intron 25.0%
!!! TCAGAGATACTACTTTTTAA+GGG + chr2_2:29387248-29387267 Msa0247340:intron 25.0%
!! TTACTTGTTGATTGTAAACT+TGG + chr2_2:29387781-29387800 Msa0247340:intron 25.0%
!! TTACTTGTTGATTGTAAACT+TGG + chr2_2:29387781-29387800 Msa0247340:intron 25.0%
!!! GTGATAGTGTTTTTTTGATT+TGG - chr2_2:29388520-29388539 None:intergenic 25.0%
! AATTCCACTTATACATATCT+TGG + chr2_2:29388631-29388650 Msa0247340:CDS 25.0%
! GATTGAATAAACGAGTTAAA+TGG + chr2_2:29388803-29388822 Msa0247340:CDS 25.0%
AGAAAAGAAAGAGAGTTAGT+AGG - chr2_2:29382883-29382902 None:intergenic 30.0%
ATGTCCATTCTTTCTCAATT+TGG + chr2_2:29383133-29383152 Msa0247340:CDS 30.0%
ACGTATGAATAGAAAGTAAG+CGG - chr2_2:29383304-29383323 None:intergenic 30.0%
CTCAAGCATAATAACTATGT+TGG + chr2_2:29383639-29383658 Msa0247340:intron 30.0%
!! TTACCCATTTTTATTACGAC+CGG + chr2_2:29383796-29383815 Msa0247340:intron 30.0%
!! CTTTTCTTTTTTCGCTAAGT+TGG + chr2_2:29383840-29383859 Msa0247340:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_2:29383887-29383906 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_2:29383888-29383907 Msa0247340:intron 30.0%
AATTAAAGGGAATCAAGAGT+AGG - chr2_2:29384249-29384268 None:intergenic 30.0%
! TGAAGTTTCAATTCGACTTT+TGG + chr2_2:29384610-29384629 Msa0247340:intron 30.0%
!! GTGTGAAGGTATCTAAATTA+GGG - chr2_2:29384880-29384899 None:intergenic 30.0%
!! TGTGTGAAGGTATCTAAATT+AGG - chr2_2:29384881-29384900 None:intergenic 30.0%
TATCGTTTCATGCTATAATC+GGG - chr2_2:29385049-29385068 None:intergenic 30.0%
TATGTGATATACGTAAAGAG+AGG + chr2_2:29385067-29385086 Msa0247340:CDS 30.0%
ATGAATGCCACAATTATTAC+TGG + chr2_2:29385154-29385173 Msa0247340:CDS 30.0%
CCACAATTATTACTGGTAAT+CGG + chr2_2:29385161-29385180 Msa0247340:CDS 30.0%
AGTAAAATGGCATGCAAAAA+CGG + chr2_2:29385317-29385336 Msa0247340:intron 30.0%
TTGATGAGCCAGATAATATT+AGG + chr2_2:29385701-29385720 Msa0247340:intron 30.0%
ACAAATATTCATGTTCGACT+GGG + chr2_2:29385763-29385782 Msa0247340:intron 30.0%
! ATTTTGGATCAATTTGTGGT+TGG + chr2_2:29386004-29386023 Msa0247340:intron 30.0%
! TTTTGGATCAATTTGTGGTT+GGG + chr2_2:29386005-29386024 Msa0247340:intron 30.0%
ATGAGTCACTTATTGTAGAA+AGG - chr2_2:29386054-29386073 None:intergenic 30.0%
TATATCTTTCGTAGGATAGA+TGG + chr2_2:29386383-29386402 Msa0247340:intron 30.0%
ATAGGAACGTTGCATATATT+TGG + chr2_2:29386563-29386582 Msa0247340:intron 30.0%
!!! AAACTTTTTTATACTCCCTC+CGG + chr2_2:29386761-29386780 Msa0247340:intron 30.0%
TCTCTAACTTATCCATAGAA+AGG + chr2_2:29386939-29386958 Msa0247340:intron 30.0%
AACTTATCCATAGAAAGGAT+CGG + chr2_2:29386944-29386963 Msa0247340:intron 30.0%
! TTTTCAGCATCAAATGCAAT+AGG + chr2_2:29386967-29386986 Msa0247340:intron 30.0%
CGAAAAATTAAATGAGCATG+TGG + chr2_2:29387051-29387070 Msa0247340:intron 30.0%
ATATATTTCAGCTGTTGAAG+AGG - chr2_2:29387114-29387133 None:intergenic 30.0%
TTTATGGGTTCCATCAAATA+TGG + chr2_2:29387563-29387582 Msa0247340:intron 30.0%
! ATATTGATGATAGCACAACA+AGG + chr2_2:29387694-29387713 Msa0247340:intron 30.0%
AACTTGCACTGTAAGTTATA+TGG + chr2_2:29387719-29387738 Msa0247340:intron 30.0%
ACTTGCACTGTAAGTTATAT+GGG + chr2_2:29387720-29387739 Msa0247340:intron 30.0%
! ATATTGATGATAGCACAACA+AGG + chr2_2:29387694-29387713 Msa0247340:intron 30.0%
AACTTGCACTGTAAGTTATA+TGG + chr2_2:29387719-29387738 Msa0247340:intron 30.0%
ACTTGCACTGTAAGTTATAT+GGG + chr2_2:29387720-29387739 Msa0247340:intron 30.0%
! TTCTATCGATGTGGAATTTT+TGG + chr2_2:29388358-29388377 Msa0247340:CDS 30.0%
!! TTTTGCATTCTCTGAAGAAT+TGG - chr2_2:29388417-29388436 None:intergenic 30.0%
TTCAGAGAATGCAAAATAAG+TGG + chr2_2:29388421-29388440 Msa0247340:CDS 30.0%
TCTTCCAAGATATGTATAAG+TGG - chr2_2:29388638-29388657 None:intergenic 30.0%
TATGCTGAGTACATGAATTA+TGG + chr2_2:29388769-29388788 Msa0247340:CDS 30.0%
ATGCTGAGTACATGAATTAT+GGG + chr2_2:29388770-29388789 Msa0247340:CDS 30.0%
TACAGTGACACAATTTATTG+AGG + chr2_2:29388870-29388889 Msa0247340:CDS 30.0%
ACAGTGACACAATTTATTGA+GGG + chr2_2:29388871-29388890 Msa0247340:CDS 30.0%
AATTTATTGAGGGGAATCTA+TGG + chr2_2:29388881-29388900 Msa0247340:CDS 30.0%
TTGTTCTTGATTGTTCTAGT+TGG + chr2_2:29388973-29388992 Msa0247340:three_prime_UTR 30.0%
!! TAAAAGGCTTTGAACCAAAA+GGG - chr2_2:29389249-29389268 None:intergenic 30.0%
!! ATAAAAGGCTTTGAACCAAA+AGG - chr2_2:29389250-29389269 None:intergenic 30.0%
TTTGTTGAAGAAAGAGCCAT+TGG - chr2_2:29382917-29382936 None:intergenic 35.0%
TATGTGCATGTTATGAGAGT+GGG - chr2_2:29382971-29382990 None:intergenic 35.0%
!! AATTCAGATGCTGCTTTAGT+GGG - chr2_2:29383040-29383059 None:intergenic 35.0%
!! AAATTCAGATGCTGCTTTAG+TGG - chr2_2:29383041-29383060 None:intergenic 35.0%
! TTGCTCCATCTGAATTTGTT+GGG + chr2_2:29383074-29383093 Msa0247340:CDS 35.0%
TCCATTCTTTCTCAATTTGG+TGG + chr2_2:29383136-29383155 Msa0247340:CDS 35.0%
ACCACCAAATTGAGAAAGAA+TGG - chr2_2:29383140-29383159 None:intergenic 35.0%
AACTTGAGTATAAGCCAAAG+TGG - chr2_2:29383384-29383403 None:intergenic 35.0%
! GTTTATATCTTTTCCAGGGT+TGG + chr2_2:29383442-29383461 Msa0247340:intron 35.0%
ATGACTTATTTATCCAACCC+TGG - chr2_2:29383458-29383477 None:intergenic 35.0%
TTACATTTACCGAAGTGATG+TGG + chr2_2:29383674-29383693 Msa0247340:intron 35.0%
TAATACTTCTGTCCCTATCA+TGG - chr2_2:29383724-29383743 None:intergenic 35.0%
!! TACCCATTTTTATTACGACC+GGG + chr2_2:29383797-29383816 Msa0247340:intron 35.0%
AAAAGCAGAGTTCTATGTAG+CGG - chr2_2:29383825-29383844 None:intergenic 35.0%
! ACGGAGGGAGTATAAAAAAT+TGG - chr2_2:29383868-29383887 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr2_2:29384018-29384037 Msa0247340:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr2_2:29384022-29384041 Msa0247340:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_2:29384122-29384141 Msa0247340:intron 35.0%
GTAGGTAAGCATAATAGTAC+TGG + chr2_2:29384692-29384711 Msa0247340:intron 35.0%
! AAAAAGGTCGATTTCCTTCT+TGG + chr2_2:29384909-29384928 Msa0247340:CDS 35.0%
! AAAAGGTCGATTTCCTTCTT+GGG + chr2_2:29384910-29384929 Msa0247340:CDS 35.0%
! TCATCTCTTTTAACCCAAGA+AGG - chr2_2:29384926-29384945 None:intergenic 35.0%
GAAGAAATGGAATCTCATGA+TGG + chr2_2:29385120-29385139 Msa0247340:CDS 35.0%
AAATGGAATCTCATGATGGT+CGG + chr2_2:29385124-29385143 Msa0247340:CDS 35.0%
CCGATTACCAGTAATAATTG+TGG - chr2_2:29385164-29385183 None:intergenic 35.0%
AAACACACACAAAAACCTTC+TGG + chr2_2:29385265-29385284 Msa0247340:intron 35.0%
TTAACTTATGGGTTTCCGTA+GGG - chr2_2:29385398-29385417 None:intergenic 35.0%
! TTTAACTTATGGGTTTCCGT+AGG - chr2_2:29385399-29385418 None:intergenic 35.0%
TAGCTCGTATATGTAAGGTT+CGG - chr2_2:29385470-29385489 None:intergenic 35.0%
GAACTTAGCTCGTATATGTA+AGG - chr2_2:29385475-29385494 None:intergenic 35.0%
!! AACAAGAATGCGTCATTTTG+TGG - chr2_2:29385576-29385595 None:intergenic 35.0%
TTAGGTGTATATGGGTTTGT+AGG + chr2_2:29385719-29385738 Msa0247340:intron 35.0%
GACAAATATTCATGTTCGAC+TGG + chr2_2:29385762-29385781 Msa0247340:intron 35.0%
CAAATATTCATGTTCGACTG+GGG + chr2_2:29385764-29385783 Msa0247340:intron 35.0%
AAGAGATATGAGAATGGGTA+GGG - chr2_2:29385798-29385817 None:intergenic 35.0%
AAAGAGATATGAGAATGGGT+AGG - chr2_2:29385799-29385818 None:intergenic 35.0%
ATACACCGTCATTAACATGT+TGG + chr2_2:29385937-29385956 Msa0247340:intron 35.0%
TTGTTTCATAAGACCACAAG+TGG + chr2_2:29386414-29386433 Msa0247340:intron 35.0%
TGTTTCATAAGACCACAAGT+GGG + chr2_2:29386415-29386434 Msa0247340:intron 35.0%
TATCAATTTAGGTAAGCTCG+GGG - chr2_2:29386546-29386565 None:intergenic 35.0%
CTATCAATTTAGGTAAGCTC+GGG - chr2_2:29386547-29386566 None:intergenic 35.0%
CCTATCAATTTAGGTAAGCT+CGG - chr2_2:29386548-29386567 None:intergenic 35.0%
TGCAACGTTCCTATCAATTT+AGG - chr2_2:29386557-29386576 None:intergenic 35.0%
CGTTGCATATATTTGGAGAT+CGG + chr2_2:29386570-29386589 Msa0247340:intron 35.0%
CTTGGTCACATTAGTATGTT+TGG - chr2_2:29386701-29386720 None:intergenic 35.0%
CACACACACAAAGATTAGTA+AGG - chr2_2:29388214-29388233 None:intergenic 35.0%
!!! GGCACTGTCGATTTTATTTT+TGG + chr2_2:29388442-29388461 Msa0247340:CDS 35.0%
!!! ACAGTTTTGAAAAAGAGTCG+TGG - chr2_2:29388473-29388492 None:intergenic 35.0%
AAAAACACTATCACAGCTCA+CGG + chr2_2:29388526-29388545 Msa0247340:CDS 35.0%
GTATAAGTGGAATTAACCGA+CGG - chr2_2:29388625-29388644 None:intergenic 35.0%
ATACATATCTTGGAAGACCA+TGG + chr2_2:29388641-29388660 Msa0247340:CDS 35.0%
GTTCTTGAATATTGCTTCCA+TGG - chr2_2:29388661-29388680 None:intergenic 35.0%
CTCATATAAGTGATGTGTTG+AGG + chr2_2:29388695-29388714 Msa0247340:CDS 35.0%
AATAAACGAGTTAAATGGCC+AGG + chr2_2:29388808-29388827 Msa0247340:CDS 35.0%
ATAAACGAGTTAAATGGCCA+GGG + chr2_2:29388809-29388828 Msa0247340:CDS 35.0%
TCATTCATAATGTGATACCC+TGG - chr2_2:29388829-29388848 None:intergenic 35.0%
CAGTGACACAATTTATTGAG+GGG + chr2_2:29388872-29388891 Msa0247340:CDS 35.0%
GAACAAGAACATGCAAGATT+TGG - chr2_2:29388959-29388978 None:intergenic 35.0%
! TCTTGATTGTTCTAGTTGGT+TGG + chr2_2:29388977-29388996 Msa0247340:three_prime_UTR 35.0%
TGGGAGAGGTAAATTAATGA+TGG + chr2_2:29389000-29389019 Msa0247340:three_prime_UTR 35.0%
GGGAGAGGTAAATTAATGAT+GGG + chr2_2:29389001-29389020 Msa0247340:three_prime_UTR 35.0%
ACTTGTTTCAAGCTTGAAGT+AGG + chr2_2:29389136-29389155 Msa0247340:three_prime_UTR 35.0%
CTTGTTTCAAGCTTGAAGTA+GGG + chr2_2:29389137-29389156 Msa0247340:three_prime_UTR 35.0%
TTAGTAGGTTCCACTACGTT+GGG - chr2_2:29382868-29382887 None:intergenic 40.0%
CATGTTATGAGAGTGGGTAT+TGG - chr2_2:29382965-29382984 None:intergenic 40.0%
GTATGTGCATGTTATGAGAG+TGG - chr2_2:29382972-29382991 None:intergenic 40.0%
GTTGCTCCATCTGAATTTGT+TGG + chr2_2:29383073-29383092 Msa0247340:CDS 40.0%
ACTGTCCCAACAAATTCAGA+TGG - chr2_2:29383082-29383101 None:intergenic 40.0%
TTTCCTCTGATGCACTTACT+TGG + chr2_2:29383221-29383240 Msa0247340:CDS 40.0%
! CCTCTAGTGCTATTACCTTT+GGG - chr2_2:29383268-29383287 None:intergenic 40.0%
!! ACCCATTTTTATTACGACCG+GGG + chr2_2:29383798-29383817 Msa0247340:intron 40.0%
TCCCCGGTCGTAATAAAAAT+GGG - chr2_2:29383802-29383821 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_2:29384126-29384145 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr2_2:29384021-29384040 Msa0247340:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_2:29384126-29384145 Msa0247340:intron 40.0%
TGAACTCTGATGTGAGAACA+TGG + chr2_2:29384720-29384739 Msa0247340:CDS 40.0%
TACAAATCCAGAGACATGCA+TGG + chr2_2:29384757-29384776 Msa0247340:CDS 40.0%
GAGAGTCAATTAGTGTCTAC+TGG + chr2_2:29384806-29384825 Msa0247340:CDS 40.0%
! GCATTGACATCATTTGGCTT+AGG - chr2_2:29384832-29384851 None:intergenic 40.0%
AAGCCAAATGATGTCAATGC+TGG + chr2_2:29384832-29384851 Msa0247340:CDS 40.0%
AGAAAGCTCTTGCAAGCAAA+TGG + chr2_2:29384947-29384966 Msa0247340:CDS 40.0%
GAAAGCTCTTGCAAGCAAAT+GGG + chr2_2:29384948-29384967 Msa0247340:CDS 40.0%
AAAGCTCTTGCAAGCAAATG+GGG + chr2_2:29384949-29384968 Msa0247340:CDS 40.0%
!!! TTTTACCAAGGTGATGGATG+CGG + chr2_2:29385012-29385031 Msa0247340:CDS 40.0%
AAATGTAGCTGACCTAAACG+TGG - chr2_2:29385206-29385225 None:intergenic 40.0%
ACGTTTAGGTCAGCTACATT+TGG + chr2_2:29385205-29385224 Msa0247340:CDS 40.0%
TCACAAAAATGTGGTCCAGA+AGG - chr2_2:29385283-29385302 None:intergenic 40.0%
! TTCTGGACCACATTTTTGTG+AGG + chr2_2:29385282-29385301 Msa0247340:intron 40.0%
! TCTGGACCACATTTTTGTGA+GGG + chr2_2:29385283-29385302 Msa0247340:intron 40.0%
CAATGTCCCTCACAAAAATG+TGG - chr2_2:29385292-29385311 None:intergenic 40.0%
GGACATTGCGAAGAGTAAAA+TGG + chr2_2:29385304-29385323 Msa0247340:intron 40.0%
! CCCTCGTAAATAATTTGCGA+CGG - chr2_2:29385343-29385362 None:intergenic 40.0%
CCGTCGCAAATTATTTACGA+GGG + chr2_2:29385340-29385359 Msa0247340:intron 40.0%
CGTCGCAAATTATTTACGAG+GGG + chr2_2:29385341-29385360 Msa0247340:intron 40.0%
TAACCCATGCGAAATTTGCA+AGG + chr2_2:29385365-29385384 Msa0247340:intron 40.0%
AACCCATGCGAAATTTGCAA+GGG + chr2_2:29385366-29385385 Msa0247340:intron 40.0%
AGCTCGTATATGTAAGGTTC+GGG - chr2_2:29385469-29385488 None:intergenic 40.0%
TTGTCCCCTATTAGCTAGTT+GGG - chr2_2:29385747-29385766 None:intergenic 40.0%
TTTGTCCCCTATTAGCTAGT+TGG - chr2_2:29385748-29385767 None:intergenic 40.0%
AGAGATATGAGAATGGGTAG+GGG - chr2_2:29385797-29385816 None:intergenic 40.0%
CTGAGCCAACATGTTAATGA+CGG - chr2_2:29385945-29385964 None:intergenic 40.0%
GATCAATTTGTGGTTGGGTT+GGG + chr2_2:29386010-29386029 Msa0247340:intron 40.0%
! ATCAATTTGTGGTTGGGTTG+GGG + chr2_2:29386011-29386030 Msa0247340:intron 40.0%
AAAATGTTAACAAGTGCCCC+CGG - chr2_2:29386220-29386239 None:intergenic 40.0%
GTTTCATAAGACCACAAGTG+GGG + chr2_2:29386416-29386435 Msa0247340:intron 40.0%
! AAAATTTGGGGTTGTGTCTG+AGG + chr2_2:29386495-29386514 Msa0247340:intron 40.0%
CCGAGCTTACCTAAATTGAT+AGG + chr2_2:29386545-29386564 Msa0247340:intron 40.0%
ATTGTGAAAGAGTGGACATC+TGG - chr2_2:29386605-29386624 None:intergenic 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr2_2:29386875-29386894 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr2_2:29386874-29386893 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr2_2:29386874-29386893 Msa0247340:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr2_2:29386875-29386894 Msa0247340:intron 40.0%
! AGAGTATTCTATACTCCCTC+CGG - chr2_2:29386893-29386912 None:intergenic 40.0%
CTGAAAACCGATCCTTTCTA+TGG - chr2_2:29386954-29386973 None:intergenic 40.0%
CAGGCAAGAATGTGTTATGT+TGG - chr2_2:29387017-29387036 None:intergenic 40.0%
TTTCGCATTCTGTAAGTTGC+AGG - chr2_2:29387036-29387055 None:intergenic 40.0%
TTGAAGAGGACATGAGTCAT+AGG - chr2_2:29387100-29387119 None:intergenic 40.0%
! ATCTCTTTTCAGAACACTGC+TGG + chr2_2:29388283-29388302 Msa0247340:CDS 40.0%
CACATCGATAGAATACTGAG+AGG - chr2_2:29388351-29388370 None:intergenic 40.0%
CTCTCAGTATTCTATCGATG+TGG + chr2_2:29388349-29388368 Msa0247340:CDS 40.0%
!! AGAAACCAGTTGGTTCGTTA+GGG - chr2_2:29388561-29388580 None:intergenic 40.0%
AACTGGATTGAGAAACCAGT+TGG - chr2_2:29388571-29388590 None:intergenic 40.0%
! CTGCAATATTACCGCTGATT+CGG + chr2_2:29388591-29388610 Msa0247340:CDS 40.0%
! GTGGAATGGAGATTTTGCAT+TGG + chr2_2:29388735-29388754 Msa0247340:CDS 40.0%
GAGTACATGAATTATGGGTC+TGG + chr2_2:29388775-29388794 Msa0247340:CDS 40.0%
! TGATTGTTCTAGTTGGTTGG+TGG + chr2_2:29388980-29388999 Msa0247340:three_prime_UTR 40.0%
! GATTGTTCTAGTTGGTTGGT+GGG + chr2_2:29388981-29389000 Msa0247340:three_prime_UTR 40.0%
! TTTGAACCAAAAGGGCCTTT+TGG - chr2_2:29389241-29389260 None:intergenic 40.0%
GTTAGTAGGTTCCACTACGT+TGG - chr2_2:29382869-29382888 None:intergenic 45.0%
!! CTTTCTCAATTTGGTGGTGC+TGG + chr2_2:29383142-29383161 Msa0247340:CDS 45.0%
!! CAATTTGGTGGTGCTGGATT+TGG + chr2_2:29383148-29383167 Msa0247340:CDS 45.0%
AGACCAAGTAAGTGCATCAG+AGG - chr2_2:29383227-29383246 None:intergenic 45.0%
CCCAAAGGTAATAGCACTAG+AGG + chr2_2:29383265-29383284 Msa0247340:intron 45.0%
! GCCTCTAGTGCTATTACCTT+TGG - chr2_2:29383269-29383288 None:intergenic 45.0%
ACTCACACACCACATCACTT+CGG - chr2_2:29383686-29383705 None:intergenic 45.0%
TGTGTGAGTGAAGCTACCTT+GGG + chr2_2:29383697-29383716 Msa0247340:intron 45.0%
GTCCCCGGTCGTAATAAAAA+TGG - chr2_2:29383803-29383822 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_2:29384125-29384144 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_2:29384125-29384144 Msa0247340:intron 45.0%
AATCCAGAGACATGCATGGA+CGG + chr2_2:29384761-29384780 Msa0247340:CDS 45.0%
! ACATGCATGGACGGATTTGA+AGG + chr2_2:29384770-29384789 Msa0247340:CDS 45.0%
!! CTGCCAGCATTGACATCATT+TGG - chr2_2:29384838-29384857 None:intergenic 45.0%
ATGTTGTCGTTGCTACCGAT+GGG + chr2_2:29384981-29385000 Msa0247340:CDS 45.0%
! CGGGAATTTTACCAAGGTGA+TGG + chr2_2:29385006-29385025 Msa0247340:CDS 45.0%
AATCTCATGATGGTCGGAGA+TGG + chr2_2:29385130-29385149 Msa0247340:CDS 45.0%
GCCGTCGCAAATTATTTACG+AGG + chr2_2:29385339-29385358 Msa0247340:intron 45.0%
ACCCATGCGAAATTTGCAAG+GGG + chr2_2:29385367-29385386 Msa0247340:intron 45.0%
TAGGCACCCAACTAGCTAAT+AGG + chr2_2:29385738-29385757 Msa0247340:intron 45.0%
AGGCACCCAACTAGCTAATA+GGG + chr2_2:29385739-29385758 Msa0247340:intron 45.0%
GAGATATGAGAATGGGTAGG+GGG - chr2_2:29385796-29385815 None:intergenic 45.0%
GGATCAATTTGTGGTTGGGT+TGG + chr2_2:29386009-29386028 Msa0247340:intron 45.0%
AAATGTTAACAAGTGCCCCC+GGG - chr2_2:29386219-29386238 None:intergenic 45.0%
ATTGTAGTGTACCCCACTTG+TGG - chr2_2:29386430-29386449 None:intergenic 45.0%
AGTAGCACTAAGATCCGACT+CGG + chr2_2:29388324-29388343 Msa0247340:CDS 45.0%
AAAGACCCTAACGAACCAAC+TGG + chr2_2:29388553-29388572 Msa0247340:CDS 45.0%
!! GAGAAACCAGTTGGTTCGTT+AGG - chr2_2:29388562-29388581 None:intergenic 45.0%
CAGCGGTAATATTGCAGAAC+TGG - chr2_2:29388588-29388607 None:intergenic 45.0%
TGGAATTAACCGACGGAAGA+AGG - chr2_2:29388618-29388637 None:intergenic 45.0%
! ATGAATTATGGGTCTGGAGC+TGG + chr2_2:29388781-29388800 Msa0247340:CDS 45.0%
AATCTATGGTTGCCCACAAC+AGG + chr2_2:29388895-29388914 Msa0247340:CDS 45.0%
GTGAATGCTACACCTGTTGT+GGG - chr2_2:29388910-29388929 None:intergenic 45.0%
AGTGAATGCTACACCTGTTG+TGG - chr2_2:29388911-29388930 None:intergenic 45.0%
!! ATTATTATTATTATTATTGA+TGG + chr2_2:29384333-29384352 Msa0247340:intron 5.0%
!!! AAAATATTAATACTTTTTTT+TGG + chr2_2:29384661-29384680 Msa0247340:intron 5.0%
GGGACAGTGCAAGATGTAGT+TGG + chr2_2:29383094-29383113 Msa0247340:CDS 50.0%
! TTTGGGATTCTGAGCAGCAG+AGG - chr2_2:29383251-29383270 None:intergenic 50.0%
TCTGCTGCTCAGAATCCCAA+AGG + chr2_2:29383250-29383269 Msa0247340:CDS 50.0%
GTGTGTGAGTGAAGCTACCT+TGG + chr2_2:29383696-29383715 Msa0247340:intron 50.0%
AGCTACCTTGGGACCATGAT+AGG + chr2_2:29383708-29383727 Msa0247340:intron 50.0%
GCTACCTTGGGACCATGATA+GGG + chr2_2:29383709-29383728 Msa0247340:intron 50.0%
AATCCGTCCATGCATGTCTC+TGG - chr2_2:29384767-29384786 None:intergenic 50.0%
! GACGGATTTGAAGGCACAAG+TGG + chr2_2:29384779-29384798 Msa0247340:CDS 50.0%
GATGTTGTCGTTGCTACCGA+TGG + chr2_2:29384980-29384999 Msa0247340:CDS 50.0%
GGTAAAATTCCCGCTCCCAT+CGG - chr2_2:29384999-29385018 None:intergenic 50.0%
! TGGGAGCGGGAATTTTACCA+AGG + chr2_2:29385000-29385019 Msa0247340:CDS 50.0%
GGTAATCGGAGCTTCATCGA+CGG + chr2_2:29385175-29385194 Msa0247340:CDS 50.0%
CCCCCTTGCAAATTTCGCAT+GGG - chr2_2:29385371-29385390 None:intergenic 50.0%
CCCATGCGAAATTTGCAAGG+GGG + chr2_2:29385368-29385387 Msa0247340:intron 50.0%
TCCCCCTTGCAAATTTCGCA+TGG - chr2_2:29385372-29385391 None:intergenic 50.0%
GGCACCCAACTAGCTAATAG+GGG + chr2_2:29385740-29385759 Msa0247340:intron 50.0%
TATGAGAATGGGTAGGGGGA+CGG - chr2_2:29385792-29385811 None:intergenic 50.0%
AATGTTAACAAGTGCCCCCG+GGG - chr2_2:29386218-29386237 None:intergenic 50.0%
TGTGTGTGTGCAGCTGTTAG+TGG + chr2_2:29388238-29388257 Msa0247340:intron 50.0%
TGTGCAGCTGTTAGTGGTAG+AGG + chr2_2:29388244-29388263 Msa0247340:intron 50.0%
GTGCAGCTGTTAGTGGTAGA+GGG + chr2_2:29388245-29388264 Msa0247340:intron 50.0%
! CGGATCTTAGTGCTACTGCT+TGG - chr2_2:29388321-29388340 None:intergenic 50.0%
GAATACTGAGAGGTCCGAGT+CGG - chr2_2:29388341-29388360 None:intergenic 50.0%
! TGATTCGGACCTTCTTCCGT+CGG + chr2_2:29388606-29388625 Msa0247340:CDS 50.0%
AGTGATGTGTTGAGGCCAGA+AGG + chr2_2:29388703-29388722 Msa0247340:CDS 50.0%
GTGATGTGTTGAGGCCAGAA+GGG + chr2_2:29388704-29388723 Msa0247340:CDS 50.0%
ACAGGTGTAGCATTCACTGC+TGG + chr2_2:29388913-29388932 Msa0247340:CDS 50.0%
GTAGCATTCACTGCTGGACT+AGG + chr2_2:29388919-29388938 Msa0247340:CDS 50.0%
!! TTCTAGTTGGTTGGTGGGAG+AGG + chr2_2:29388986-29389005 Msa0247340:three_prime_UTR 50.0%
! GATCCACCAAAAGGCCCTTT+TGG + chr2_2:29389232-29389251 Msa0247340:three_prime_UTR 50.0%
! GAACCAAAAGGGCCTTTTGG+TGG - chr2_2:29389238-29389257 None:intergenic 50.0%
! GGAGCACTAGCACATAGTGC+TGG - chr2_2:29383019-29383038 None:intergenic 55.0%
CTGTCCCTATCATGGTCCCA+AGG - chr2_2:29383716-29383735 None:intergenic 55.0%
GAGTTCTATGTAGCGGTCCC+CGG - chr2_2:29383818-29383837 None:intergenic 55.0%
ATGCACCGCATCCATCACCT+TGG - chr2_2:29385020-29385039 None:intergenic 55.0%
ATCGGAGCTTCATCGACGGT+TGG + chr2_2:29385179-29385198 Msa0247340:CDS 55.0%
TCGACGGTTGGACCACGTTT+AGG + chr2_2:29385191-29385210 Msa0247340:CDS 55.0%
!! TTGCAAGGGGGAGTACCCTA+CGG + chr2_2:29385380-29385399 Msa0247340:intron 55.0%
GGTTTCCTTAACCAGTGCCC+CGG + chr2_2:29386198-29386217 Msa0247340:intron 55.0%
GTTTCCTTAACCAGTGCCCC+GGG + chr2_2:29386199-29386218 Msa0247340:intron 55.0%
TTTCCTTAACCAGTGCCCCG+GGG + chr2_2:29386200-29386219 Msa0247340:intron 55.0%
!! GCTACTGCTTGGTGCTTCTC+AGG - chr2_2:29388310-29388329 None:intergenic 55.0%
CGGAAGAAGGTCCGAATCAG+CGG - chr2_2:29388605-29388624 None:intergenic 55.0%
ATGTGTTGAGGCCAGAAGGG+TGG + chr2_2:29388707-29388726 Msa0247340:CDS 55.0%
TTCCACTCTAGCCACCCTTC+TGG - chr2_2:29388721-29388740 None:intergenic 55.0%
GAAGGGTGGCTAGAGTGGAA+TGG + chr2_2:29388721-29388740 Msa0247340:CDS 55.0%
!! AGGGCCTTTTGGTGGATCAG+CGG - chr2_2:29389230-29389249 None:intergenic 55.0%
GTCGTTGCTACCGATGGGAG+CGG + chr2_2:29384986-29385005 Msa0247340:CDS 60.0%
TCGTTGCTACCGATGGGAGC+GGG + chr2_2:29384987-29385006 Msa0247340:CDS 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr2_2:29386201-29386220 Msa0247340:intron 60.0%
GTCGCCGCTGATCCACCAAA+AGG + chr2_2:29389223-29389242 Msa0247340:three_prime_UTR 60.0%
GGCCAGAAGGGTGGCTAGAG+TGG + chr2_2:29388716-29388735 Msa0247340:CDS 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr2_2:29386206-29386225 None:intergenic 70.0%
AACAAGTGCCCCCGGGGCAC+TGG - chr2_2:29386212-29386231 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 29382864 29389282 29382864 ID=Msa0247340;Name=Msa0247340
chr2_2 mRNA 29382864 29389282 29382864 ID=Msa0247340-mRNA-1;Parent=Msa0247340;Name=Msa0247340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=53|1|1|1|1|1|3|334|527
chr2_2 exon 29382864 29383271 29382864 ID=Msa0247340-mRNA-1:exon:10431;Parent=Msa0247340-mRNA-1
chr2_2 exon 29384696 29385226 29384696 ID=Msa0247340-mRNA-1:exon:10432;Parent=Msa0247340-mRNA-1
chr2_2 exon 29388251 29389282 29388251 ID=Msa0247340-mRNA-1:exon:10433;Parent=Msa0247340-mRNA-1
chr2_2 five_prime_UTR 29382864 29382916 29382864 ID=Msa0247340-mRNA-1:five_prime_utr;Parent=Msa0247340-mRNA-1
chr2_2 CDS 29382917 29383271 29382917 ID=Msa0247340-mRNA-1:cds;Parent=Msa0247340-mRNA-1
chr2_2 CDS 29384696 29385226 29384696 ID=Msa0247340-mRNA-1:cds;Parent=Msa0247340-mRNA-1
chr2_2 CDS 29388251 29388948 29388251 ID=Msa0247340-mRNA-1:cds;Parent=Msa0247340-mRNA-1
chr2_2 three_prime_UTR 29388949 29389282 29388949 ID=Msa0247340-mRNA-1:three_prime_utr;Parent=Msa0247340-mRNA-1
Gene Sequence

>Msa0247340

ATGGCTCTTTCTTCAACAAAAGAGTTAGTACTATCTCGAACAAAACCAATACCCACTCTCATAACATGCACATACATTTTAACATTATTGTTGTCTACTCCAGCACTATGTGCTAGTGCTCCCACTAAAGCAGCATCTGAATTTGAGTTTCTTAAGGTTGCTCCATCTGAATTTGTTGGGACAGTGCAAGATGTAGTTGGCATTTTGCAAGAAGTAATGTCCATTCTTTCTCAATTTGGTGGTGCTGGATTTGGAGATTCACGTCTCTCTAATGCTGTTTCTGATTGTATTGATATGCTTGATCTTTCCTCTGATGCACTTACTTGGTCTGCCTCTGCTGCTCAGAATCCCAAAGGTAAGCATAATAGTACTGGAAATGTGAACTCTGATGTGAGAACATGGTTAAGTTCTGCACTTACAAATCCAGAGACATGCATGGACGGATTTGAAGGCACAAGTGGCATTGAGAGTCAATTAGTGTCTACTGGCCTAAGCCAAATGATGTCAATGCTGGCAGAGCTTCTCACACAAGTAGACCCTAATTTAGATACCTTCACACAAAAAGAACAAAAAGGTCGATTTCCTTCTTGGGTTAAAAGAGATGATAGAAAGCTCTTGCAAGCAAATGGGGTGAATGTTGATGTTGTCGTTGCTACCGATGGGAGCGGGAATTTTACCAAGGTGATGGATGCGGTGCATGCAGCTCCCGATTATAGCATGAAACGATATGTGATATACGTAAAGAGAGGTGTTTATGTTGAAAATGTTGAAATCAAGAAGAAGAAATGGAATCTCATGATGGTCGGAGATGGTATGAATGCCACAATTATTACTGGTAATCGGAGCTTCATCGACGGTTGGACCACGTTTAGGTCAGCTACATTTGCTGTTAGTGGTAGAGGGTTCATAGCACGAGATATCTCTTTTCAGAACACTGCTGGTCCTGAGAAGCACCAAGCAGTAGCACTAAGATCCGACTCGGACCTCTCAGTATTCTATCGATGTGGAATTTTTGGTTATCAAGACAGCTTATACACGCATACAATGCGCCAATTCTTCAGAGAATGCAAAATAAGTGGCACTGTCGATTTTATTTTTGGCGATGCCACGACTCTTTTTCAAAACTGTCAAATACTAGTAAAAAAAGGGTTACCAAATCAAAAAAACACTATCACAGCTCACGGACGAAAAGACCCTAACGAACCAACTGGTTTCTCAATCCAGTTCTGCAATATTACCGCTGATTCGGACCTTCTTCCGTCGGTTAATTCCACTTATACATATCTTGGAAGACCATGGAAGCAATATTCAAGAACAATTTTCATGCAATCTCATATAAGTGATGTGTTGAGGCCAGAAGGGTGGCTAGAGTGGAATGGAGATTTTGCATTGGATACATTGTACTATGCTGAGTACATGAATTATGGGTCTGGAGCTGGATTGAATAAACGAGTTAAATGGCCAGGGTATCACATTATGAATGATTCTAGTCAAGCTAGTAACTTTACAGTGACACAATTTATTGAGGGGAATCTATGGTTGCCCACAACAGGTGTAGCATTCACTGCTGGACTAGGAGTTTAA

Protein sequence

>Msa0247340

MALSSTKELVLSRTKPIPTLITCTYILTLLLSTPALCASAPTKAASEFEFLKVAPSEFVGTVQDVVGILQEVMSILSQFGGAGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQNPKGKHNSTGNVNSDVRTWLSSALTNPETCMDGFEGTSGIESQLVSTGLSQMMSMLAELLTQVDPNLDTFTQKEQKGRFPSWVKRDDRKLLQANGVNVDVVVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKRGVYVENVEIKKKKWNLMMVGDGMNATIITGNRSFIDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPSVNSTYTYLGRPWKQYSRTIFMQSHISDVLRPEGWLEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLPTTGVAFTAGLGV*