AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0665010


Find 346 sgRNAs with CRISPR-Local

Find 730 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr4_4 gene 4303613 4316425 4303613 ID=Msa0665010;Name=Msa0665010
chr4_4 mRNA 4303613 4316425 4303613 ID=Msa0665010-mRNA-1;Parent=Msa0665010;Name=Msa0665010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=352|1|1|1|1|1|23|329|1636
chr4_4 exon 4303613 4305432 4303613 ID=Msa0665010-mRNA-1:exon:1480;Parent=Msa0665010-mRNA-1
chr4_4 exon 4305810 4305891 4305810 ID=Msa0665010-mRNA-1:exon:1479;Parent=Msa0665010-mRNA-1
chr4_4 exon 4305981 4306093 4305981 ID=Msa0665010-mRNA-1:exon:1478;Parent=Msa0665010-mRNA-1
chr4_4 exon 4306536 4306667 4306536 ID=Msa0665010-mRNA-1:exon:1477;Parent=Msa0665010-mRNA-1
chr4_4 exon 4306745 4306928 4306745 ID=Msa0665010-mRNA-1:exon:1476;Parent=Msa0665010-mRNA-1
chr4_4 exon 4307035 4307168 4307035 ID=Msa0665010-mRNA-1:exon:1475;Parent=Msa0665010-mRNA-1
chr4_4 exon 4307634 4307738 4307634 ID=Msa0665010-mRNA-1:exon:1474;Parent=Msa0665010-mRNA-1
chr4_4 exon 4307821 4307922 4307821 ID=Msa0665010-mRNA-1:exon:1473;Parent=Msa0665010-mRNA-1
chr4_4 exon 4308031 4308123 4308031 ID=Msa0665010-mRNA-1:exon:1472;Parent=Msa0665010-mRNA-1
chr4_4 exon 4308208 4308525 4308208 ID=Msa0665010-mRNA-1:exon:1471;Parent=Msa0665010-mRNA-1
chr4_4 exon 4308713 4308814 4308713 ID=Msa0665010-mRNA-1:exon:1470;Parent=Msa0665010-mRNA-1
chr4_4 exon 4308909 4308971 4308909 ID=Msa0665010-mRNA-1:exon:1469;Parent=Msa0665010-mRNA-1
chr4_4 exon 4309204 4309666 4309204 ID=Msa0665010-mRNA-1:exon:1468;Parent=Msa0665010-mRNA-1
chr4_4 exon 4309965 4310119 4309965 ID=Msa0665010-mRNA-1:exon:1467;Parent=Msa0665010-mRNA-1
chr4_4 exon 4310701 4311201 4310701 ID=Msa0665010-mRNA-1:exon:1466;Parent=Msa0665010-mRNA-1
chr4_4 exon 4311415 4311456 4311415 ID=Msa0665010-mRNA-1:exon:1465;Parent=Msa0665010-mRNA-1
chr4_4 exon 4311868 4311999 4311868 ID=Msa0665010-mRNA-1:exon:1464;Parent=Msa0665010-mRNA-1
chr4_4 exon 4312748 4312812 4312748 ID=Msa0665010-mRNA-1:exon:1463;Parent=Msa0665010-mRNA-1
chr4_4 exon 4312926 4313258 4312926 ID=Msa0665010-mRNA-1:exon:1462;Parent=Msa0665010-mRNA-1
chr4_4 exon 4315402 4315474 4315402 ID=Msa0665010-mRNA-1:exon:1461;Parent=Msa0665010-mRNA-1
chr4_4 exon 4315621 4315713 4315621 ID=Msa0665010-mRNA-1:exon:1460;Parent=Msa0665010-mRNA-1
chr4_4 exon 4315812 4315876 4315812 ID=Msa0665010-mRNA-1:exon:1459;Parent=Msa0665010-mRNA-1
chr4_4 exon 4316004 4316425 4316004 ID=Msa0665010-mRNA-1:exon:1458;Parent=Msa0665010-mRNA-1
chr4_4 five_prime_UTR 4316074 4316425 4316074 ID=Msa0665010-mRNA-1:five_prime_utr;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4316004 4316073 4316004 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4315812 4315876 4315812 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4315621 4315713 4315621 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4315402 4315474 4315402 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4312926 4313258 4312926 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4312748 4312812 4312748 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4311868 4311999 4311868 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4311415 4311456 4311415 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4310701 4311201 4310701 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4309965 4310119 4309965 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4309204 4309666 4309204 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4308909 4308971 4308909 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4308713 4308814 4308713 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4308208 4308525 4308208 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4308031 4308123 4308031 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4307821 4307922 4307821 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4307634 4307738 4307634 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4307035 4307168 4307035 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4306745 4306928 4306745 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4306536 4306667 4306536 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4305981 4306093 4305981 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4305810 4305891 4305810 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 CDS 4303942 4305432 4303942 ID=Msa0665010-mRNA-1:cds;Parent=Msa0665010-mRNA-1
chr4_4 three_prime_UTR 4303613 4303941 4303613 ID=Msa0665010-mRNA-1:three_prime_utr;Parent=Msa0665010-mRNA-1
Gene Sequence

>Msa0665010

ATGGCCCCAAAATCAGGGAAAGGAAAAACAAATAAAGCCAAGACAGAGAAGAAGAAAAAGGAGGAGAAAGCTGTGGCACCTTCTCTTGTAGACATTATTGTGGTAACTCCTTATGATTCACAAATTGTATTGAAGGGTATCTCTACTGATAAGATACTTGATGTGAGGAAGCTATTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTACTAAGAATGGTTGAAGAGAATTACAATGAAGAATCTCAAGCAACTACACACGTGCGAAGGTTATTGGACATTATAGCCTGCACAACAAAATTCGGAAAGCCCAAACGCAACATAGCAGGCCCAGACTCATCAAAGCCCAAGAAAAACGGAAAAGCCCATAATCAAAACAAGAGCGGTTTGAGCCCACCCGTAACACCGAATGGAGAAACCCGGGTCGGGTCACCAATGTTGGAGCCGCCGGCGTCGCCGATATCGGAGAATGTGGGAATGGTGGCGATTCATCCGACGCCGAAGTTGTCGGATTTTTATGAGTTCTTTTCATTTTCGAATCTCACTCCTCCGATTTTGCATTTGAAGAAATGTGAACTGAAGGAAGAAGATGATAGAGGCAAAGGAGATTACTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAGTAATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTACAGTGTTGGAAAGCTGTCTCTACAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAATGCTTATGGATCATTGATGAAAGCTTTTGCGGATCGTAACAAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTAGTTGCTCCATCCGTTGGTGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAACTGGGGTGGCAATGGTGGTGGCCAGGGAAGAAATGGAGAATATGAACGTCGACCATGGGCAACAGATTTTGAAATTTTGGCTTCTCTTCCTTCCAAAACTGAGGAGGAGAGGGTGATCAGAGACCGAAAAGCTTTTCTACTTCATAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGCATGTGATGGAGTCCAAGTCTAGTATGAATTCTTCTCCGGGTTCTGTTATGCATCGAGATCAAGTGGGAGACTTATCCATTGTAGTTGTACGTGGTGGAAATGGAAAGTTTGATTCTACACTGAATGAATCGAGTAAGCATAATGACGATGTTCAGAAGAATTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGACACTTCTTCCTTGGCCGTAGTTGTTGTTCACCACTGTGGATATACAGCTACAGTGAAGGCTGTTGGTAATGCGAATGCAAGGAAACCTAAAGTTCAGGATATCGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGTTTGAGGGCACTGCTTCACAAATCTGGAGCTGATTCATCAGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTAAAGATCTTGTTAGGAAGGTGGTTGAGGAATCCATCGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCGATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCAACCGATGGCAGTTCCAATAACAAGGATGGAAGTAATGTCGAGCCAGCCGTGAAAGGTCTTGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACATAAATTGTGCAGAGGAGCAAAATAACGATGAGCCAAATAACGATGAACCAAGTAGTTTGAATGAATTAGAGAAACTACTTTCTCCAGAAGCCTTTTTGCGTCTCAAAGAATCTGGATCTGGTCTTCATATGAAGACGGTGGATGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTTACGGACTTTGGATCACTTGAACTTTCTCCTGTTGATGGTCGTACACTTACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTTCAGAGAATCTTCCACACATACAATCACTTTGTATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTCATTGCTTCTGTAGACAATGCAGCAGATTTACCTTCAGTCATTGCCTCGACACTGAATTTTTTTCTTGGAGGGTGTCAAACTGAAGATACAGACCAAACTTTGGGTGATGATTATCATCTCAAAATTCATTGGTTACGTATGTTTTTGTCAAAAAGATTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGAAAGTTATCTATTCTTAGAGGGCTCTGTCACAAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCCCCTAAGCCCTTTGGAAAGTATGATATTATCAGCCTTGTTCCCGTTTGCAAGCATGTGGGATGCTCCTCAATAGATGGACGCAATTTATTGGAATCATCGAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTTAGTTATGGAACAAAGGCATTAGCAAAGATGATGACTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCGTTGGATATAAATGAGAGGGAGCTTGGACTTGACCATCCTGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTACCGTCTGCAACATATTGAGCTGGCTCTGAAGTACGTTAATCGCGCTCTCTTCCTCCTACATTTCACATGCGGTCTGTCTCATCCAAATACAGCTGCTACATATATAAATGTTGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTTCGGTACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGACTGCTGCAAGCTATCATGCCATAGCCATAGCACTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAGGCGAAGCTTGGCACAGAAGATCTTCGAACTCAGGACGCGGCTGCATGGCTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCAAAAAATGGAACTCCAAAGACAGACACATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGATGCTCAACGGAAACAAAGGCGTCCAAAGATACTTCCAGTAAGTGATAACAACTCTCAAGAACACGATGATGCTGCAATAGTTGATGATGTCGTTATTGTTGACAATGCAAAAGATGCCACAAAAGCAGTAGAAGGCAAAATAGAAGAAACAAAAGCCAAACATGGAACCGAAGAACCAAAAAAAATTGTTGATCTCAGCATGCACAAGCCAGTGGTGACAGTTGAAGCTGTTTATGAGACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGTTCAGGTAACGCTGCTAATCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCGAAGCTCACTGTTAATGGTTCTGATAATCACATGTACAAGGAAGCCAGTTACAGGAATGACACAACCCTGCACCAAAAAGCAGCTCCAAAAGTAGCTTCAGCTATGTTATCTCCATCTAGAAAATCAAAAACACCAAAAGCTTTGTCATCTAAAATTTCATCAACTCCAGCATCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCTGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAAACCGAGACAGAAAAGGTAAATGATGAAAATGAGATGCCGAAAAATGAAGGTTCTATCGAAACTTCTAATGCTGATACAGTTCCACAAAAAGATGAAAAAGAACCTTCTGATGCTGATACAGATCCACATCAAGATGAATCTGAACAAGATAACTCTTCATCAGAACTTGAGAAGGTTTCCCCTTCATCTGATCAAGCAAAATCTTCCGAAACAAATGGAAGCAAGCTTTCTGCTGCAGCCAAACCTTTCAGCCCAGGAACGTTGTCCGCGTCTCGCCATTTAAGTCCAGTTCCTCTCGCGAGCATATATGATGCAAATGGGAGTCAAGGCATTCTTGTAGAGCCTGTTCTTCCTCCTGCTGCTGCCAGGGTCCCTTGTGGCCCTAGATCACCGTTGTATTACAGAACCAATTATACATTCCGCATGAAACACAGTTCGACCAAAATAAGGGAAATGAGTGGATCAGGTGGTCCGAAAATTATGAATCCACATGCTCCTGAGTTTGTTCCAAGAAGTGCTTCTCAAGTAGAAAATGGTGAAAAGAACAGTGCCTCCAAAAACTGTCTTTCTGAATCCGAGAAGTCAGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAGTCTGTTCATCAAAATGCTGATGTTGTGGATGAGCCTAAAGTTAGTGAAGGAAAAGTTGAGAACTTTGAAAACTCTTCTGATGAAGTAGCTAAAGACAGCGCTGTCATAAAAATAATGTACGGTACTGAGGAAAAGAATAAGACAGTAGTTAATTCCAGCGATGACAGTGAAGAGCAGGACAATTTAGATGGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAAAAAACCACAAATGGAGTCGCTGAATTGTACAACCAGCCGTCAATTTGTGCTTCGGTTCGTTGA

Protein sequence

>Msa0665010

MAPKSGKGKTNKAKTEKKKKEEKAVAPSLVDIIVVTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEENYNEESQATTHVRRLLDIIACTTKFGKPKRNIAGPDSSKPKKNGKAHNQNKSGLSPPVTPNGETRVGSPMLEPPASPISENVGMVAIHPTPKLSDFYEFFSFSNLTPPILHLKKCELKEEDDRGKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFADRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDENWGGNGGGQGRNGEYERRPWATDFEILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVMESKSSMNSSPGSVMHRDQVGDLSIVVVRGGNGKFDSTLNESSKHNDDVQKNLIKGLSADESVTVNDTSSLAVVVVHHCGYTATVKAVGNANARKPKVQDIEIDDQPEGGANALNINSLRALLHKSGADSSEGTLTSLSNFDDLDASKDLVRKVVEESIEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDGSSNNKDGSNVEPAVKGLGKQFKLLKKREKKPSDINCAEEQNNDEPNNDEPSSLNELEKLLSPEAFLRLKESGSGLHMKTVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLSENLPHIQSLCIHEMITRAFKHLLKAVIASVDNAADLPSVIASTLNFFLGGCQTEDTDQTLGDDYHLKIHWLRMFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGTEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPVSDNNSQEHDDAAIVDDVVIVDNAKDATKAVEGKIEETKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGWQEANSKGRSGNAANRKSGRRQRPLLSKLTVNGSDNHMYKEASYRNDTTLHQKAAPKVASAMLSPSRKSKTPKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKTETEKVNDENEMPKNEGSIETSNADTVPQKDEKEPSDADTDPHQDESEQDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLSPVPLASIYDANGSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREMSGSGGPKIMNPHAPEFVPRSASQVENGEKNSASKNCLSESEKSEIARQILLSFLVKSVHQNADVVDEPKVSEGKVENFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNLDGEGFVVVTNRRKSRQKTTNGVAELYNQPSICASVR*