AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450830 MtrunA17_Chr3g0095221 98.226 451 8 0 1 451 1 451 0.0 903
Msa0450830 MtrunA17_Chr5g0442221 77.273 440 97 3 14 450 10 449 0.0 686
Msa0450830 MtrunA17_Chr7g0270821 51.126 444 209 4 10 449 4 443 1.42e-155 449
Msa0450830 MtrunA17_Chr1g0193961 52.184 435 202 2 8 442 6 434 2.90e-155 448
Msa0450830 MtrunA17_Chr3g0130251 47.222 468 215 6 1 442 8 469 1.63e-143 418
Msa0450830 MtrunA17_Chr4g0067811 48.635 403 204 2 40 441 33 433 2.40e-139 407
Msa0450830 MtrunA17_Chr2g0295241 49.502 402 192 3 43 439 33 428 3.14e-139 407
Msa0450830 MtrunA17_Chr8g0387391 50.125 401 198 2 43 442 40 439 5.99e-139 407
Msa0450830 MtrunA17_Chr1g0202651 49.005 402 203 2 43 443 51 451 3.53e-137 402
Msa0450830 MtrunA17_Chr7g0255311 50.000 404 199 3 43 443 59 462 1.40e-135 399
Msa0450830 MtrunA17_Chr7g0248451 46.939 441 229 3 11 447 19 458 2.65e-134 395
Msa0450830 MtrunA17_Chr8g0348491 49.127 401 202 2 43 442 51 450 5.56e-133 392
Msa0450830 MtrunA17_Chr1g0202641 48.259 402 206 2 43 443 51 451 2.20e-127 392
Msa0450830 MtrunA17_Chr1g0202641 47.291 406 212 2 43 447 551 955 2.55e-123 382
Msa0450830 MtrunA17_Chr4g0070281 46.462 424 217 7 36 451 60 481 5.94e-124 369
Msa0450830 MtrunA17_Chr1g0202621 45.025 402 213 3 43 443 44 438 3.99e-120 358
Msa0450830 MtrunA17_Chr2g0301091 49.593 369 184 2 41 407 50 418 6.99e-120 358
Msa0450830 MtrunA17_Chr2g0319881 43.820 178 100 0 6 183 2 179 1.64e-42 148
Msa0450830 MtrunA17_Chr6g0449961 27.826 345 200 11 16 350 17 322 5.46e-27 112
Msa0450830 MtrunA17_Chr3g0121891 26.110 383 224 13 15 383 4 341 1.30e-24 105
Msa0450830 MtrunA17_Chr5g0418411 27.222 360 207 10 12 364 6 317 1.06e-23 102
Msa0450830 MtrunA17_Chr4g0043661 28.487 337 185 11 13 341 5 293 6.81e-23 100
Msa0450830 MtrunA17_Chr3g0121881 26.651 439 264 16 15 436 1 398 8.84e-23 99.8
Msa0450830 MtrunA17_Chr5g0413141 24.691 405 260 10 39 429 51 424 2.83e-22 99.0
Msa0450830 MtrunA17_Chr6g0461181 25.169 445 263 16 38 440 21 437 2.00e-21 96.3
Msa0450830 MtrunA17_Chr2g0332801 28.182 330 189 10 47 361 59 355 3.84e-20 92.4
Msa0450830 MtrunA17_Chr8g0337571 25.664 339 200 10 12 343 6 299 1.63e-19 90.1
Msa0450830 MtrunA17_Chr3g0089021 25.781 384 243 12 37 410 61 412 2.36e-19 90.1
Msa0450830 MtrunA17_Chr4g0043431 27.926 376 216 14 48 407 36 372 5.01e-19 88.6
Msa0450830 MtrunA17_Chr6g0468871 53.947 76 34 1 240 314 22 97 1.17e-18 80.9
Msa0450830 MtrunA17_Chr4g0020771 25.065 387 232 14 47 414 74 421 1.67e-18 87.4
Msa0450830 MtrunA17_Chr3g0100091 30.412 194 119 4 150 341 77 256 6.87e-18 84.7
Msa0450830 MtrunA17_Chr7g0258111 25.890 309 189 8 46 341 47 328 8.73e-18 85.5
Msa0450830 MtrunA17_Chr1g0173451 23.618 398 255 15 46 433 75 433 1.33e-17 84.7
Msa0450830 MtrunA17_Chr1g0194231 24.570 407 259 14 47 435 81 457 2.06e-17 84.3
Msa0450830 MtrunA17_Chr2g0319871 57.812 64 27 0 189 252 1 64 2.78e-17 76.3
Msa0450830 MtrunA17_Chr4g0052621 26.380 326 199 10 39 350 56 354 3.30e-17 83.6
Msa0450830 MtrunA17_Chr5g0413411 25.146 342 183 13 48 350 122 429 5.79e-17 83.2
Msa0450830 MtrunA17_Chr7g0230891 26.098 410 221 18 46 428 36 390 6.61e-17 82.4
Msa0450830 MtrunA17_Chr2g0332971 26.452 310 179 10 46 339 27 303 7.33e-17 82.4
Msa0450830 MtrunA17_Chr8g0365891 25.581 344 184 12 46 350 106 416 1.37e-16 82.0
Msa0450830 MtrunA17_Chr7g0270361 24.429 438 275 13 30 450 59 457 1.91e-16 81.3
Msa0450830 MtrunA17_Chr1g0195221 27.187 320 177 10 49 350 37 318 2.85e-16 80.5
Msa0450830 MtrunA17_Chr1g0150291 25.167 449 273 18 12 450 17 412 4.75e-16 79.7
Msa0450830 MtrunA17_Chr4g0018151 25.287 435 270 16 14 436 48 439 8.43e-16 79.3
Msa0450830 MtrunA17_Chr8g0365901 23.810 378 246 12 47 413 65 411 1.02e-15 79.0
Msa0450830 MtrunA17_Chr2g0303941 26.113 337 199 10 14 340 4 300 1.04e-15 78.6
Msa0450830 MtrunA17_Chr2g0293681 26.887 212 130 4 152 350 157 356 1.32e-15 78.6
Msa0450830 MtrunA17_Chr8g0337581 26.384 307 177 10 48 343 32 300 9.60e-15 75.9
Msa0450830 MtrunA17_Chr7g0257701 27.778 198 122 5 150 343 188 368 1.08e-14 75.5
Msa0450830 MtrunA17_Chr8g0336481 30.457 197 113 5 160 350 51 229 4.20e-14 72.4
Msa0450830 MtrunA17_Chr1g0150301 24.427 393 258 12 45 431 25 384 3.03e-13 71.2
Msa0450830 MtrunA17_Chr4g0067631 23.167 341 193 10 47 345 52 365 1.03e-12 69.7
Msa0450830 MtrunA17_Chr7g0257721 24.306 288 174 12 47 323 76 330 4.44e-12 67.0
Msa0450830 MtrunA17_Chr7g0228411 24.148 352 208 10 40 361 33 355 1.04e-11 66.6
Msa0450830 MtrunA17_Chr1g0149241 24.484 339 205 14 13 340 5 303 1.35e-11 65.9
Msa0450830 MtrunA17_Chr2g0291841 37.500 128 70 5 160 280 91 215 8.59e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450830 AT4G23820.1 76.102 431 99 2 11 441 7 433 0.0 686
Msa0450830 AT5G41870.1 68.468 444 134 3 11 451 9 449 0.0 621
Msa0450830 AT3G62110.1 51.740 431 205 3 4 433 1 429 8.58e-158 455
Msa0450830 AT3G62110.2 51.740 431 205 3 4 433 1 429 8.58e-158 455
Msa0450830 AT4G33440.1 52.246 423 193 5 33 451 56 473 1.29e-141 414
Msa0450830 AT3G16850.1 47.816 435 221 4 14 447 7 436 1.51e-136 400
Msa0450830 AT3G48950.1 44.954 436 234 4 13 443 8 442 1.31e-134 396
Msa0450830 AT3G61490.5 48.010 402 207 2 43 443 56 456 2.63e-132 391
Msa0450830 AT3G61490.2 46.853 429 222 4 17 443 17 441 2.83e-132 390
Msa0450830 AT3G61490.3 46.853 429 222 4 17 443 17 441 2.83e-132 390
Msa0450830 AT3G61490.1 46.853 429 222 4 17 443 17 441 2.83e-132 390
Msa0450830 AT3G61490.4 48.010 402 207 2 43 443 154 554 1.04e-131 392
Msa0450830 AT4G23500.1 46.667 405 214 2 43 446 64 467 5.10e-127 377
Msa0450830 AT2G23900.1 44.218 441 238 5 14 447 19 458 7.64e-126 374
Msa0450830 AT5G49215.2 45.137 401 219 1 42 441 36 436 3.92e-121 360
Msa0450830 AT5G49215.1 45.432 405 212 2 42 441 38 438 6.80e-121 360
Msa0450830 AT3G42950.1 46.336 423 221 6 20 439 40 459 2.29e-118 355
Msa0450830 AT3G06770.2 45.274 402 209 3 43 439 39 434 3.53e-117 350
Msa0450830 AT3G06770.5 45.274 402 209 3 43 439 40 435 4.33e-117 350
Msa0450830 AT1G19170.1 46.782 404 209 6 41 440 81 482 3.75e-115 347
Msa0450830 AT3G06770.1 44.809 366 191 3 79 439 6 365 2.91e-103 312
Msa0450830 AT3G06770.3 44.809 366 191 3 79 439 6 365 2.91e-103 312
Msa0450830 AT3G06770.4 42.769 325 175 3 120 439 29 347 1.77e-85 266
Msa0450830 AT2G41850.1 28.989 376 223 13 46 409 67 410 7.85e-29 118
Msa0450830 AT3G15720.1 29.496 417 231 16 44 441 21 393 3.95e-28 116
Msa0450830 AT3G15720.3 29.496 417 231 16 44 441 20 392 4.18e-28 116
Msa0450830 AT3G15720.2 29.496 417 228 17 44 441 20 389 4.68e-26 110
Msa0450830 AT5G17200.1 31.068 309 173 10 47 350 39 312 1.77e-25 108
Msa0450830 AT3G15720.4 30.655 336 183 13 123 441 27 329 8.43e-25 105
Msa0450830 AT5G14650.1 26.705 352 220 11 1 343 1 323 7.09e-24 103
Msa0450830 AT3G57510.1 25.412 425 264 11 8 420 38 421 1.27e-23 103
Msa0450830 AT3G57790.2 28.754 313 181 9 46 341 34 321 3.10e-23 102
Msa0450830 AT3G57790.1 28.754 313 181 9 46 341 34 321 3.10e-23 102
Msa0450830 AT1G56710.1 25.758 462 287 17 8 444 2 432 1.00e-22 100
Msa0450830 AT3G26610.1 25.066 379 237 11 48 412 68 413 1.93e-21 97.1
Msa0450830 AT5G14650.2 26.506 332 206 11 1 323 1 303 8.65e-21 93.2
Msa0450830 AT2G43870.1 28.382 377 210 12 14 383 4 327 4.13e-20 92.0
Msa0450830 AT1G10640.1 23.798 416 255 12 44 426 116 502 7.74e-20 92.4
Msa0450830 AT1G70500.1 24.828 435 271 13 4 427 35 424 1.93e-19 90.9
Msa0450830 AT1G60590.1 23.342 377 218 11 48 385 124 468 2.02e-19 91.3
Msa0450830 AT3G59850.1 28.863 343 199 10 44 378 20 325 3.25e-19 89.7
Msa0450830 AT1G02460.1 24.760 416 266 12 48 444 90 477 3.44e-19 90.5
Msa0450830 AT3G59850.2 28.863 343 199 10 44 378 64 369 4.33e-19 89.7
Msa0450830 AT4G35670.1 28.354 328 185 10 34 350 15 303 4.39e-19 89.4
Msa0450830 AT4G32375.1 31.220 205 120 4 150 350 19 206 7.58e-19 89.0
Msa0450830 AT5G27530.1 25.463 432 251 15 8 428 28 399 9.18e-19 89.0
Msa0450830 AT3G07970.1 29.386 228 142 4 160 380 167 382 1.79e-18 87.8
Msa0450830 AT5G44840.1 26.753 385 246 12 49 428 26 379 2.86e-18 86.7
Msa0450830 AT1G23460.2 25.063 399 253 14 41 427 36 400 3.02e-18 87.0
Msa0450830 AT1G23460.1 25.063 399 253 14 41 427 60 424 3.51e-18 87.0
Msa0450830 AT4G35670.2 33.171 205 117 5 150 350 8 196 5.61e-18 84.3
Msa0450830 AT4G32380.1 33.831 201 112 6 148 344 116 299 5.86e-18 86.3
Msa0450830 AT5G39910.1 25.893 336 191 10 13 340 10 295 3.45e-17 83.2
Msa0450830 AT2G15470.1 24.379 443 272 14 12 436 5 402 8.75e-17 82.4
Msa0450830 AT2G43880.2 27.356 329 195 11 42 365 26 315 1.41e-16 80.9
Msa0450830 AT2G15460.1 24.368 435 267 13 12 429 5 394 2.09e-16 81.3
Msa0450830 AT2G43880.1 27.356 329 195 11 42 365 26 315 2.43e-16 80.9
Msa0450830 AT2G43890.1 23.908 435 255 15 15 431 9 385 2.49e-16 80.9
Msa0450830 AT2G26620.1 24.324 407 262 12 43 436 27 400 2.96e-16 80.9
Msa0450830 AT1G02790.1 27.469 324 190 11 8 323 15 301 3.03e-16 80.9
Msa0450830 AT1G48100.1 24.516 310 190 9 49 343 82 362 3.11e-16 81.3
Msa0450830 AT2G15450.1 24.379 443 272 14 12 436 5 402 3.77e-16 80.5
Msa0450830 AT1G80170.1 23.284 408 258 14 47 436 53 423 5.38e-16 80.5
Msa0450830 AT2G40310.1 24.265 408 263 13 43 436 27 402 8.02e-16 79.3
Msa0450830 AT5G44830.1 29.348 276 158 9 160 428 75 320 1.67e-15 77.8
Msa0450830 AT4G32380.2 34.444 180 97 6 148 323 116 278 2.44e-15 78.2
Msa0450830 AT1G80140.1 27.386 241 146 6 148 383 59 275 3.98e-15 76.6
Msa0450830 AT1G43080.1 24.887 442 277 15 8 436 3 402 6.29e-15 76.6
Msa0450830 AT4G01890.1 25.705 319 194 10 49 350 67 359 9.43e-15 76.6
Msa0450830 AT1G78400.1 24.439 401 255 14 49 436 37 402 1.29e-14 75.9
Msa0450830 AT4G32370.1 29.741 232 138 7 149 370 123 339 2.13e-14 74.7
Msa0450830 AT1G17150.1 25.362 414 247 16 43 436 29 400 2.27e-14 75.1
Msa0450830 AT1G43090.1 24.826 431 270 14 8 426 3 391 2.34e-14 75.1
Msa0450830 AT1G05650.1 26.296 270 161 9 160 413 122 369 4.74e-14 73.9
Msa0450830 AT1G43100.1 24.495 396 256 12 43 426 27 391 1.63e-13 72.8
Msa0450830 AT4G13760.1 24.272 412 258 14 43 436 27 402 1.64e-13 72.4
Msa0450830 AT1G65570.1 26.282 312 196 11 15 323 3 283 1.90e-13 72.0
Msa0450830 AT1G05660.1 26.894 264 167 9 160 413 122 369 5.93e-13 70.5
Msa0450830 AT4G18180.1 31.944 216 119 8 138 343 119 316 6.27e-13 70.9
Msa0450830 AT3G14040.1 23.462 439 233 15 46 444 70 445 6.54e-13 70.9
Msa0450830 AT3G07850.1 22.811 434 240 13 47 444 70 444 8.80e-12 67.4

Find 144 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGATGATAAAGTATTTA+TGG 0.105941 3_3:+37040374 None:intergenic
CGCTGAACTCAAAGGCATTC+AGG 0.212276 3_3:-37040116 Msa0450830:CDS
TGTTCGATATGTCACGATTT+TGG 0.231140 3_3:-37036024 Msa0450830:CDS
CATTCAGGGCAGCTATTTAT+AGG 0.235860 3_3:-37040101 Msa0450830:CDS
TTCTATGATATTAACCTTCA+TGG 0.242349 3_3:-37035107 Msa0450830:CDS
TCTTCATTCTTTAGAGGTTA+TGG 0.263528 3_3:-37036944 Msa0450830:intron
AGAAATAGGAGAAGAAAATA+AGG 0.274211 3_3:+37040247 None:intergenic
ACATATAGCTCATGAATAAT+TGG 0.280176 3_3:+37034968 None:intergenic
ATTGCACCTTTACCATCTTA+TGG 0.281917 3_3:-37036909 Msa0450830:CDS
TTTATAGGATTCAGCACTTA+AGG 0.299188 3_3:-37040086 Msa0450830:CDS
TAGAAACAAATCTCAGAAAA+AGG 0.312132 3_3:+37035125 None:intergenic
GATGGTAAAGGTGCAATTAA+AGG 0.313514 3_3:+37036915 None:intergenic
TTCTTTAGAGGTTATGGAAT+TGG 0.313836 3_3:-37036938 Msa0450830:intron
TTCACAACTGGTAGAGCATT+AGG 0.314497 3_3:+37035221 None:intergenic
GGCAGAGATAGAAGAGAAAT+AGG 0.316006 3_3:+37040233 None:intergenic
GCATTGACAAATCAGATTAA+AGG 0.320296 3_3:-37034944 Msa0450830:three_prime_UTR
GAATTACAATTAAGAGTGTT+TGG 0.330158 3_3:-37035196 Msa0450830:CDS
ATCACGATCCGACGTATAAC+TGG 0.336919 3_3:-37035479 Msa0450830:CDS
ACGATTTCCATAACCGATTT+CGG 0.346257 3_3:-37040159 Msa0450830:CDS
AATTACAATTAAGAGTGTTT+GGG 0.348788 3_3:-37035195 Msa0450830:CDS
TCACAACTGGTAGAGCATTA+GGG 0.385260 3_3:+37035222 None:intergenic
GGTGAGAATGGAACAATTGA+TGG 0.402464 3_3:-37036336 Msa0450830:CDS
AAGGAGGAAAGTGGAGGGGA+TGG 0.414250 3_3:+37040272 None:intergenic
ACTGGATCGTCTCCATTTGC+CGG 0.418862 3_3:-37035461 Msa0450830:CDS
CCTACGGCAATGCCGGCAAA+TGG 0.426213 3_3:+37035449 None:intergenic
GACACCGCCGAAATCGGTTA+TGG 0.431442 3_3:+37040152 None:intergenic
ATGACTCTTTATCTTGCTGC+TGG 0.433521 3_3:-37039991 Msa0450830:CDS
AGGAGAAGAAAATAAGGAAA+AGG 0.438992 3_3:+37040253 None:intergenic
TCATATTCCACAACATGTTC+CGG 0.439214 3_3:-37040210 Msa0450830:CDS
ATTGTAATTCCCTTCACAAC+TGG 0.439300 3_3:+37035209 None:intergenic
GGGTCAATTCCATCAGTGTT+AGG 0.443337 3_3:+37035987 None:intergenic
AGGCTAAGGAGTTGATTCAT+TGG 0.444053 3_3:+37034655 None:intergenic
TTGCAAGCTGGTTTGATACA+TGG 0.446222 3_3:-37035161 Msa0450830:CDS
ACACTTGAAGAGAGTAAAAT+CGG 0.448519 3_3:+37034767 None:intergenic
AGCTGAGCAGCCAAGAGCCT+GGG 0.448563 3_3:-37034998 Msa0450830:CDS
TGCTATTGTAGTTAGATGCT+AGG 0.449408 3_3:+37040322 None:intergenic
GTCGCCGACACCGCCGAAAT+CGG 0.451079 3_3:+37040146 None:intergenic
ATTAACCTTCATGGTGAGAC+AGG 0.459008 3_3:-37035098 Msa0450830:CDS
GCTGAACTCAAAGGCATTCA+GGG 0.462123 3_3:-37040115 Msa0450830:CDS
GAGGACTCATACATATCAAC+AGG 0.465287 3_3:-37035572 Msa0450830:CDS
TTCCAATGTTTGTCTTAATG+TGG 0.470222 3_3:+37035354 None:intergenic
AATAAGGAAAAGGAGGAAAG+TGG 0.473049 3_3:+37040263 None:intergenic
ACACACCAGGAGGCACATAA+AGG 0.475424 3_3:+37040046 None:intergenic
CAGCTGAGCAGCCAAGAGCC+TGG 0.477571 3_3:-37034999 Msa0450830:CDS
CACTATGCCGGAACATGTTG+TGG 0.484354 3_3:+37040203 None:intergenic
CTTCATGGTGAGACAGGATC+AGG 0.486921 3_3:-37035092 Msa0450830:CDS
CGCGACTCTCCTAACACTGA+TGG 0.487424 3_3:-37035996 Msa0450830:CDS
TAAGAGTGTTTGGGGTGTGA+AGG 0.492885 3_3:-37035186 Msa0450830:CDS
TTCACTGCCTACGGCAATGC+CGG 0.494196 3_3:+37035442 None:intergenic
GCCTCCTGGTGTGTACTTAA+CGG 0.495904 3_3:-37040037 Msa0450830:CDS
AGAAGAAAATAAGGAAAAGG+AGG 0.497310 3_3:+37040256 None:intergenic
TCCCTTCCTCTTCCATAAGA+TGG 0.498572 3_3:+37036897 None:intergenic
CCTTTACCATCTTATGGAAG+AGG 0.498720 3_3:-37036903 Msa0450830:CDS
TGCCGGTGTCCTGTCGTGTT+CGG 0.500148 3_3:-37034830 Msa0450830:three_prime_UTR
AAACTGATATACCTTCCTCC+TGG 0.504242 3_3:+37036870 None:intergenic
GTGTCGGAACGGCACTATGC+CGG 0.505281 3_3:+37040191 None:intergenic
TTTCACAAAAGGTTAGTCCT+TGG 0.506890 3_3:-37035031 Msa0450830:CDS
TTGAATTGTCAGTATTATGT+TGG 0.510441 3_3:+37034902 None:intergenic
GTTGAAGAGGTTGATGTGTT+CGG 0.513089 3_3:+37035391 None:intergenic
ATGTGTATATCGAAAATTCA+AGG 0.520244 3_3:-37035298 Msa0450830:CDS
ACGCTCCTTTATGTGCCTCC+TGG 0.523955 3_3:-37040051 Msa0450830:CDS
AGGAAAAGGAGGAAAGTGGA+GGG 0.525829 3_3:+37040267 None:intergenic
ATCCACATTAAGACAAACAT+TGG 0.527637 3_3:-37035356 Msa0450830:CDS
TTGTGGCTGTGAAGAGTGGA+TGG 0.529310 3_3:-37035541 Msa0450830:CDS
TGGTACAAGACCCAGGCTCT+TGG 0.531741 3_3:+37034988 None:intergenic
AATCGGTTATTTCAAGACTC+AGG 0.537902 3_3:+37034784 None:intergenic
CCATTTGCCGGCATTGCCGT+AGG 0.539892 3_3:-37035449 Msa0450830:CDS
CCTCTTCCATAAGATGGTAA+AGG 0.544572 3_3:+37036903 None:intergenic
GCCGTAGGCAGTGAAACATC+AGG 0.545753 3_3:-37035434 Msa0450830:CDS
AACCTCTTCAACATGGGAGT+TGG 0.547865 3_3:-37035380 Msa0450830:CDS
TACCATCTTATGGAAGAGGA+AGG 0.549191 3_3:-37036899 Msa0450830:CDS
ATTAAGACAAACATTGGAAG+AGG 0.549285 3_3:-37035350 Msa0450830:CDS
AAATCGTGTCGGCGCGGTGT+CGG 0.549772 3_3:+37040175 None:intergenic
CGGCAAAACGCTGAACTCAA+AGG 0.549793 3_3:-37040124 Msa0450830:CDS
GCCTGATGTTTCACTGCCTA+CGG 0.550163 3_3:+37035433 None:intergenic
AAGGAAAAGGAGGAAAGTGG+AGG 0.551866 3_3:+37040266 None:intergenic
TGGCTGCTCAGCTGAGAACA+TGG 0.555382 3_3:+37035008 None:intergenic
TCGTGATGCCATTGCTAGGA+CGG 0.555883 3_3:+37035495 None:intergenic
ATAACCGATTTCGGCGGTGT+CGG 0.559095 3_3:-37040150 Msa0450830:CDS
GATTTCGGCGGTGTCGGCGA+CGG 0.562424 3_3:-37040144 Msa0450830:CDS
TGTTAACGATTTCTTCGTGC+CGG 0.563826 3_3:-37034847 Msa0450830:three_prime_UTR
CACATCAACCTCTTCAACAT+GGG 0.564458 3_3:-37035386 Msa0450830:CDS
AACTGGATGTATATTCCAGA+AGG 0.565675 3_3:+37036191 None:intergenic
AACTGATATACCTTCCTCCT+GGG 0.566298 3_3:+37036871 None:intergenic
ATACAAACACCGAACACGAC+AGG 0.567712 3_3:+37034821 None:intergenic
AAGAGTGGATGGGATGAATA+CGG 0.568218 3_3:-37035530 Msa0450830:CDS
CACCGAACACGACAGGACAC+CGG 0.568937 3_3:+37034828 None:intergenic
CTGATCCTGTCTCACCATGA+AGG 0.570468 3_3:+37035093 None:intergenic
CGGATCGTGATGCCATTGCT+AGG 0.571230 3_3:+37035491 None:intergenic
ATATACATCCAGTTTACTGC+AGG 0.571488 3_3:-37036182 Msa0450830:intron
GTGTCGGCGCGGTGTCGGAA+CGG 0.576004 3_3:+37040180 None:intergenic
TATATCGAAAATTCAAGGCA+AGG 0.578072 3_3:-37035293 Msa0450830:CDS
TAATGCTCTACCAGTTGTGA+AGG 0.579332 3_3:-37035219 Msa0450830:CDS
ATTACAATTAAGAGTGTTTG+GGG 0.579707 3_3:-37035194 Msa0450830:CDS
CTCTCCGTTAAGTACACACC+AGG 0.580616 3_3:+37040033 None:intergenic
TGCTGTTATTAAAGCCACAC+AGG 0.582451 3_3:-37039968 Msa0450830:intron
GTTCGCGATGTGATCATCAC+AGG 0.583823 3_3:-37036831 Msa0450830:intron
CTCAGCTGAGAACATGGCCA+AGG 0.585760 3_3:+37035014 None:intergenic
GAAGGGAGCTCCCAGGAGGA+AGG 0.586526 3_3:-37036881 Msa0450830:CDS
AAGTTCAAATGTCTGCATAG+AGG 0.586689 3_3:-37035591 Msa0450830:CDS
GGAACATGTTGTGGAATATG+AGG 0.586776 3_3:+37040212 None:intergenic
TACCAACTCCCATGTTGAAG+AGG 0.592901 3_3:+37035378 None:intergenic
AATGGAACAATTGATGGGCA+AGG 0.593507 3_3:-37036330 Msa0450830:CDS
GGAAAAGGAGGAAAGTGGAG+GGG 0.599089 3_3:+37040268 None:intergenic
ACCATCTTATGGAAGAGGAA+GGG 0.599680 3_3:-37036898 Msa0450830:CDS
GGAAGAGGAAGGGAGCTCCC+AGG 0.601338 3_3:-37036888 Msa0450830:CDS
ACACATCAACCTCTTCAACA+TGG 0.602365 3_3:-37035387 Msa0450830:CDS
GATGAATACGGTATTTCATA+CGG 0.605569 3_3:-37035518 Msa0450830:CDS
TCATACGGCCGTCCTAGCAA+TGG 0.608461 3_3:-37035503 Msa0450830:CDS
GTGAGAATGGAACAATTGAT+GGG 0.611373 3_3:-37036335 Msa0450830:CDS
AAGACAAACATTGGAAGAGG+AGG 0.612632 3_3:-37035347 Msa0450830:CDS
ATCGGTTATGGAAATCGTGT+CGG 0.613368 3_3:+37040164 None:intergenic
GATCTTGTGGCTGTGAAGAG+TGG 0.616644 3_3:-37035545 Msa0450830:CDS
GAGATGTATGGTGGAACATG+TGG 0.617873 3_3:-37036308 Msa0450830:CDS
ATGCTAGGTGGAGTGAGTAG+TGG 0.618028 3_3:+37040337 None:intergenic
AATGCTCTACCAGTTGTGAA+GGG 0.623141 3_3:-37035218 Msa0450830:CDS
AAAAGAGAGAAAAGAATCTG+TGG 0.623442 3_3:+37040422 None:intergenic
AAAACATCAGAACACTTCCA+AGG 0.628023 3_3:+37035059 None:intergenic
GAATAATTGGTACAAGACCC+AGG 0.628592 3_3:+37034981 None:intergenic
ATCAACAGGAGATGATCTTG+TGG 0.639297 3_3:-37035558 Msa0450830:CDS
AAGTATTTATGGAAAGAAAG+CGG 0.641442 3_3:+37040385 None:intergenic
GATCAGGTAGATCTCCACCT+TGG 0.642012 3_3:-37035076 Msa0450830:CDS
TTGATGGGCAAGGAGATGTA+TGG 0.649620 3_3:-37036320 Msa0450830:CDS
AACACTGATGGAATTGACCC+AGG 0.651883 3_3:-37035984 Msa0450830:intron
ATGTGGCTAAAATTGAACAA+AGG 0.654524 3_3:+37040472 None:intergenic
ACTGGATGTATATTCCAGAA+GGG 0.663404 3_3:+37036192 None:intergenic
ATGTATGGTGGAACATGTGG+AGG 0.680192 3_3:-37036305 Msa0450830:CDS
AAAATAGCAATAAACCTGTG+TGG 0.687799 3_3:+37039954 None:intergenic
TATTGTAGTTAGATGCTAGG+TGG 0.688728 3_3:+37040325 None:intergenic
ACATCAGAACACTTCCAAGG+TGG 0.689498 3_3:+37035062 None:intergenic
ATGGGCAAGGAGATGTATGG+TGG 0.690153 3_3:-37036317 Msa0450830:CDS
TATTTATGGAAAGAAAGCGG+TGG 0.692916 3_3:+37040388 None:intergenic
CATCGCGAACTCCATCGCCG+TGG 0.694091 3_3:+37036844 None:intergenic
TGTGGCTGTGAAGAGTGGAT+GGG 0.695217 3_3:-37035540 Msa0450830:CDS
AGAGGAAGGGAGCTCCCAGG+AGG 0.696203 3_3:-37036885 Msa0450830:CDS
TTATGGAAATCGTGTCGGCG+CGG 0.702772 3_3:+37040169 None:intergenic
TCCGTTAAGTACACACCAGG+AGG 0.707120 3_3:+37040036 None:intergenic
ATTCAGCACTTAAGGAGACG+TGG 0.715137 3_3:-37040078 Msa0450830:CDS
GAGACGATCCAGTTATACGT+CGG 0.721468 3_3:+37035471 None:intergenic
ATTTCCATAACCGATTTCGG+CGG 0.727085 3_3:-37040156 Msa0450830:CDS
ACTGAAAACCAGAAACAATG+TGG 0.732953 3_3:+37040455 None:intergenic
CAGCACTTAAGGAGACGTGG+TGG 0.756836 3_3:-37040075 Msa0450830:CDS
GTAGGCAGTGAAACATCAGG+CGG 0.764061 3_3:-37035431 Msa0450830:CDS
TCAGTGTTAGGAGAGTCGCG+AGG 0.797208 3_3:+37035999 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAAAATAAAAA+GGG + chr3_3:37035281-37035300 None:intergenic 0.0%
!! TAAAAAATAAAAAAATAAAA+AGG + chr3_3:37035282-37035301 None:intergenic 0.0%
!!! ACAAATTTAATAATTTTTCT+AGG - chr3_3:37036158-37036177 Msa0450830:intron 10.0%
!!! CAAATTTAATAATTTTTCTA+GGG - chr3_3:37036159-37036178 Msa0450830:intron 10.0%
!! TCTAAATTACTTTAAATTAT+GGG + chr3_3:37036469-37036488 None:intergenic 10.0%
!! ATCTAAATTACTTTAAATTA+TGG + chr3_3:37036470-37036489 None:intergenic 10.0%
!! TTATTAATCTATTATTAAAC+AGG + chr3_3:37037269-37037288 None:intergenic 10.0%
!! AAAAAATATTATTCTTGAAT+TGG + chr3_3:37037551-37037570 None:intergenic 10.0%
!!! CAAGAATAATATTTTTTTTT+TGG - chr3_3:37037554-37037573 Msa0450830:intron 10.0%
!! AAAAGAATAATTACTAAATT+TGG + chr3_3:37037650-37037669 None:intergenic 10.0%
!!! ATTTGATGATAAAGTATTTA+TGG + chr3_3:37034813-37034832 None:intergenic 15.0%
!!! ATTTTTTTTTTCTTGTAACA+GGG + chr3_3:37035641-37035660 None:intergenic 15.0%
!!! AATTTTTTTTTTCTTGTAAC+AGG + chr3_3:37035642-37035661 None:intergenic 15.0%
!! GAAAAATTATTAAATTTGTG+TGG + chr3_3:37036157-37036176 None:intergenic 15.0%
!! AATAAAAATAAAAACTATGG+TGG - chr3_3:37036618-37036637 Msa0450830:intron 15.0%
!! ATAAAAATAAAAACTATGGT+GGG - chr3_3:37036619-37036638 Msa0450830:intron 15.0%
!! AAAAAAATCTTCTTTATAGT+TGG + chr3_3:37036981-37037000 None:intergenic 15.0%
!! AAACAAACATATTACATTTA+AGG - chr3_3:37037001-37037020 Msa0450830:intron 15.0%
!!! AAATCGAACAATTTTTTTTA+AGG + chr3_3:37037074-37037093 None:intergenic 15.0%
!! TAATCTCTAACAAAAAATTA+AGG - chr3_3:37037147-37037166 Msa0450830:intron 15.0%
!! GATTAAAATTAACAAATCTT+AGG - chr3_3:37037169-37037188 Msa0450830:intron 15.0%
!!! CTTTTCAAATGTAAATAAAT+AGG - chr3_3:37037292-37037311 Msa0450830:intron 15.0%
!! ATTGATAGATTTATTTGTAT+TGG + chr3_3:37037418-37037437 None:intergenic 15.0%
!!! ATTTAAAACTTACCATTTAA+AGG - chr3_3:37037718-37037737 Msa0450830:intron 15.0%
!!! TTTAAAACTTACCATTTAAA+GGG - chr3_3:37037719-37037738 Msa0450830:intron 15.0%
!!! AATAATCGTAACATATTTTT+TGG - chr3_3:37037844-37037863 Msa0450830:intron 15.0%
!!! AATTTTTTTTAGATGCTATT+TGG + chr3_3:37038614-37038633 None:intergenic 15.0%
!!! AATGAATCTAAAATGTTTAT+TGG - chr3_3:37038659-37038678 Msa0450830:intron 15.0%
!!! ATGAATCTAAAATGTTTATT+GGG - chr3_3:37038660-37038679 Msa0450830:intron 15.0%
!!! AAAGTTTTGAATTACATTTT+AGG + chr3_3:37039116-37039135 None:intergenic 15.0%
!! TAGATAAATGATCTTTATAT+TGG - chr3_3:37039288-37039307 Msa0450830:intron 15.0%
!! TTAATATATATAGTAAACCA+AGG + chr3_3:37039316-37039335 None:intergenic 15.0%
!! TATATATATTAAGTTCTGTT+TGG - chr3_3:37039324-37039343 Msa0450830:intron 15.0%
!!! GATTGTGTACATTTTTTATT+GGG + chr3_3:37035366-37035385 None:intergenic 20.0%
!!! TGATTGTGTACATTTTTTAT+TGG + chr3_3:37035367-37035386 None:intergenic 20.0%
!!! ACAAACACAATTTTGTTTTT+TGG - chr3_3:37035547-37035566 Msa0450830:CDS 20.0%
!!! AGCTTTTCAAAAAAGATATT+TGG - chr3_3:37035597-37035616 Msa0450830:CDS 20.0%
!! AACGTAATTGAAAATTTGTA+AGG - chr3_3:37035895-37035914 Msa0450830:intron 20.0%
!!! AATTTGTAAGGATTTTTTCT+AGG - chr3_3:37035907-37035926 Msa0450830:intron 20.0%
!!! ATTTGTAAGGATTTTTTCTA+GGG - chr3_3:37035908-37035927 Msa0450830:intron 20.0%
!! ATGTAAAAAATACAAGTCAA+AGG + chr3_3:37036249-37036268 None:intergenic 20.0%
!! TGAATAGTTTATATAAGATG+GGG + chr3_3:37036443-37036462 None:intergenic 20.0%
!! GTGAATAGTTTATATAAGAT+GGG + chr3_3:37036444-37036463 None:intergenic 20.0%
!! TGTGAATAGTTTATATAAGA+TGG + chr3_3:37036445-37036464 None:intergenic 20.0%
!! TATTAACTCAATATATATCC+TGG + chr3_3:37036507-37036526 None:intergenic 20.0%
!! TTTGACCATACATTATTTAA+AGG + chr3_3:37036551-37036570 None:intergenic 20.0%
!! ACTCATGAAATATAAAATGA+GGG - chr3_3:37036848-37036867 Msa0450830:CDS 20.0%
!!! TCTTTTTTGAGAAAAAAATG+AGG - chr3_3:37036876-37036895 Msa0450830:CDS 20.0%
!!! CTTTTTTGAGAAAAAAATGA+GGG - chr3_3:37036877-37036896 Msa0450830:CDS 20.0%
!! AGCTCAATATTTATTATTTG+AGG - chr3_3:37037501-37037520 Msa0450830:intron 20.0%
!! AATATTATTCTTGAATTGGT+CGG + chr3_3:37037547-37037566 None:intergenic 20.0%
!! TTTAAATCCACACAAAAATT+AGG + chr3_3:37038075-37038094 None:intergenic 20.0%
!!! AGATTCATTTTAGTATAGTT+GGG + chr3_3:37038648-37038667 None:intergenic 20.0%
!!! TAGATTCATTTTAGTATAGT+TGG + chr3_3:37038649-37038668 None:intergenic 20.0%
!!! AAGCTTGGTTTTAATTTTAT+AGG + chr3_3:37038779-37038798 None:intergenic 20.0%
!! TATAAAAATAAGAATGAAGG+AGG + chr3_3:37038828-37038847 None:intergenic 20.0%
!!! TCCTTCATTCTTATTTTTAT+AGG - chr3_3:37038827-37038846 Msa0450830:intron 20.0%
!! ACCTATAAAAATAAGAATGA+AGG + chr3_3:37038831-37038850 None:intergenic 20.0%
!! TTGAATTCAAAAATTCAACA+AGG + chr3_3:37038934-37038953 None:intergenic 20.0%
!! AAAAAACAAAAATGCATCAT+AGG - chr3_3:37039076-37039095 Msa0450830:intron 20.0%
!! AAAAACAAAAATGCATCATA+GGG - chr3_3:37039077-37039096 Msa0450830:intron 20.0%
!! AAGATCATTTATCTAAGTTA+TGG + chr3_3:37039283-37039302 None:intergenic 20.0%
!!! TTTTTAAGAAAGTAGTTTAG+AGG - chr3_3:37039403-37039422 Msa0450830:intron 20.0%
!!! TTACAAATGTTTGCTTTATT+TGG + chr3_3:37039435-37039454 None:intergenic 20.0%
!!! AATTACAATTAAGAGTGTTT+GGG - chr3_3:37039989-37040008 Msa0450830:CDS 20.0%
! AAGTATTTATGGAAAGAAAG+CGG + chr3_3:37034802-37034821 None:intergenic 25.0%
! AGAAATAGGAGAAGAAAATA+AGG + chr3_3:37034940-37034959 None:intergenic 25.0%
! AACGTTAACACTACTAAATT+AGG + chr3_3:37035307-37035326 None:intergenic 25.0%
!!! ACAATTTTGTTTTTTGGCTA+TGG - chr3_3:37035553-37035572 Msa0450830:CDS 25.0%
!!! ATTTGGTGTTGTTTTTTAAC+AGG - chr3_3:37035614-37035633 Msa0450830:intron 25.0%
!!! AGATTTTTTAAGAGATAACC+AGG - chr3_3:37036486-37036505 Msa0450830:intron 25.0%
! ATGCTCCTTTAAATAATGTA+TGG - chr3_3:37036543-37036562 Msa0450830:intron 25.0%
! ACAAAAGAAACTGTATAACA+TGG + chr3_3:37036744-37036763 None:intergenic 25.0%
!! TGTTATACAGTTTCTTTTGT+TGG - chr3_3:37036744-37036763 Msa0450830:intron 25.0%
!! ATCAAAGAGTACAACAATAA+TGG + chr3_3:37036770-37036789 None:intergenic 25.0%
! TTTCATGAGTCATATTTACA+TGG + chr3_3:37036838-37036857 None:intergenic 25.0%
! GACTCATGAAATATAAAATG+AGG - chr3_3:37036847-37036866 Msa0450830:CDS 25.0%
! GGACTTAATGTAAAAGATTA+TGG - chr3_3:37036901-37036920 Msa0450830:CDS 25.0%
! AGCACAAAAAAAAATTAAGC+AGG - chr3_3:37036953-37036972 Msa0450830:intron 25.0%
! GCACAAAAAAAAATTAAGCA+GGG - chr3_3:37036954-37036973 Msa0450830:intron 25.0%
! CACAAAAAAAAATTAAGCAG+GGG - chr3_3:37036955-37036974 Msa0450830:intron 25.0%
!!! TCTATTTTTGTTATTGAGAC+CGG - chr3_3:37037382-37037401 Msa0450830:intron 25.0%
!! TATTTATTATTTGAGGTAGC+CGG - chr3_3:37037508-37037527 Msa0450830:intron 25.0%
! AACATTTCCCAAAGATTATT+TGG - chr3_3:37037769-37037788 Msa0450830:intron 25.0%
! ACAACATACTTCAGAATTAT+AGG - chr3_3:37037799-37037818 Msa0450830:intron 25.0%
!! TTTTCTCCACATTTCTATTT+GGG + chr3_3:37037944-37037963 None:intergenic 25.0%
!! TTTTTCTCCACATTTCTATT+TGG + chr3_3:37037945-37037964 None:intergenic 25.0%
!! TAAAATCCCATATTTGGAAT+AGG - chr3_3:37037997-37038016 Msa0450830:intron 25.0%
!!! CCTCTAAAACCTTAATATAA+CGG - chr3_3:37038570-37038589 Msa0450830:intron 25.0%
! ACAGAACATTGAATCAATTA+TGG + chr3_3:37038736-37038755 None:intergenic 25.0%
! AGAGATTAGATTTCAAAGAT+TGG + chr3_3:37038803-37038822 None:intergenic 25.0%
!!! CTTATTTTTATAGGTGAGAA+TGG - chr3_3:37038836-37038855 Msa0450830:intron 25.0%
! TTCAAAAATTCAACAAGGTT+TGG + chr3_3:37038929-37038948 None:intergenic 25.0%
! GGAATCAACATTAATAAGTT+TGG + chr3_3:37039262-37039281 None:intergenic 25.0%
! ATGTGTATATCGAAAATTCA+AGG - chr3_3:37039886-37039905 Msa0450830:intron 25.0%
!! TTAGGGTTAAAATTTTCATC+TGG + chr3_3:37039948-37039967 None:intergenic 25.0%
!!! GAATTACAATTAAGAGTGTT+TGG - chr3_3:37039988-37040007 Msa0450830:CDS 25.0%
!!! ATTACAATTAAGAGTGTTTG+GGG - chr3_3:37039990-37040009 Msa0450830:CDS 25.0%
! TAGAAACAAATCTCAGAAAA+AGG + chr3_3:37040062-37040081 None:intergenic 25.0%
! TTCTATGATATTAACCTTCA+TGG - chr3_3:37040077-37040096 Msa0450830:CDS 25.0%
!!! TGTTTTTGGATTTTCACAAA+AGG - chr3_3:37040142-37040161 Msa0450830:CDS 25.0%
! ACATATAGCTCATGAATAAT+TGG + chr3_3:37040219-37040238 None:intergenic 25.0%
! TTGAATTGTCAGTATTATGT+TGG + chr3_3:37040285-37040304 None:intergenic 25.0%
ATGTGGCTAAAATTGAACAA+AGG + chr3_3:37034715-37034734 None:intergenic 30.0%
!! AATTTTAGCCACATTGTTTC+TGG - chr3_3:37034721-37034740 Msa0450830:three_prime_UTR 30.0%
AAAAGAGAGAAAAGAATCTG+TGG + chr3_3:37034765-37034784 None:intergenic 30.0%
AGAAGAAAATAAGGAAAAGG+AGG + chr3_3:37034931-37034950 None:intergenic 30.0%
AGGAGAAGAAAATAAGGAAA+AGG + chr3_3:37034934-37034953 None:intergenic 30.0%
TTTATAGGATTCAGCACTTA+AGG - chr3_3:37035098-37035117 Msa0450830:CDS 30.0%
AAAATAGCAATAAACCTGTG+TGG + chr3_3:37035233-37035252 None:intergenic 30.0%
! TGTAAGGTTGAGTTTGAAAT+AGG + chr3_3:37035484-37035503 None:intergenic 30.0%
GTGAAACACAAACAATTGTA+AGG + chr3_3:37035500-37035519 None:intergenic 30.0%
TGTGTTTGTTTCATGTGATA+AGG + chr3_3:37035536-37035555 None:intergenic 30.0%
CATTGAATAACTAACGTTTC+TGG - chr3_3:37035675-37035694 Msa0450830:intron 30.0%
TTGTTTATAACGATGACAAG+AGG - chr3_3:37035800-37035819 Msa0450830:intron 30.0%
CGAGTATAAATAAATGATCG+AGG - chr3_3:37036121-37036140 Msa0450830:intron 30.0%
GACTATAGATAATGTGTTGT+CGG - chr3_3:37036576-37036595 Msa0450830:intron 30.0%
CATGAAATATAAAATGAGGG+TGG - chr3_3:37036851-37036870 Msa0450830:CDS 30.0%
!! TTTTGAGAAAAAAATGAGGG+TGG - chr3_3:37036880-37036899 Msa0450830:CDS 30.0%
AAATCGCTATTTAGAAACGT+TGG - chr3_3:37037204-37037223 Msa0450830:intron 30.0%
AATCGCTATTTAGAAACGTT+GGG - chr3_3:37037205-37037224 Msa0450830:intron 30.0%
!! TTGTATTGGTTTGATACTTC+CGG + chr3_3:37037404-37037423 None:intergenic 30.0%
!! TTTTTGCAACTGAACTTGTT+TGG - chr3_3:37037475-37037494 Msa0450830:intron 30.0%
!! TTTTGCAACTGAACTTGTTT+GGG - chr3_3:37037476-37037495 Msa0450830:intron 30.0%
!!! ATTTTTTTTTTGGGTAGCCT+TGG - chr3_3:37037564-37037583 Msa0450830:intron 30.0%
AAGTTGTGTATTGAATGCAT+TGG + chr3_3:37037695-37037714 None:intergenic 30.0%
TTCTGGTCCAAATAATCTTT+GGG + chr3_3:37037779-37037798 None:intergenic 30.0%
! TTTCTGGTCCAAATAATCTT+TGG + chr3_3:37037780-37037799 None:intergenic 30.0%
!! ATTCTGAAGTATGTTGTTTC+TGG + chr3_3:37037796-37037815 None:intergenic 30.0%
AATAAGCCCAAATAGAAATG+TGG - chr3_3:37037935-37037954 Msa0450830:intron 30.0%
CTAGACTAAAATCCCATATT+TGG - chr3_3:37037991-37038010 Msa0450830:intron 30.0%
! ATCTAAGCCTAATTTTTGTG+TGG - chr3_3:37038065-37038084 Msa0450830:intron 30.0%
TGTGTGGATTTAAATGTGAT+TGG - chr3_3:37038081-37038100 Msa0450830:intron 30.0%
TATGTGTTGTGACCATTATT+TGG - chr3_3:37038110-37038129 Msa0450830:intron 30.0%
AACGTTACACTACCAAATAA+TGG + chr3_3:37038125-37038144 None:intergenic 30.0%
AGTGAATGTTCAAAGTTCAA+TGG - chr3_3:37038159-37038178 Msa0450830:intron 30.0%
TTCCTTTCTTCATTCTTTAG+AGG - chr3_3:37038234-37038253 Msa0450830:intron 30.0%
! AACCTCTAAAGAATGAAGAA+AGG + chr3_3:37038239-37038258 None:intergenic 30.0%
! TCTTCATTCTTTAGAGGTTA+TGG - chr3_3:37038240-37038259 Msa0450830:intron 30.0%
! TTCTTTAGAGGTTATGGAAT+TGG - chr3_3:37038246-37038265 Msa0450830:intron 30.0%
!! AGGTATATCAGTTTTATCCA+CGG - chr3_3:37038323-37038342 Msa0450830:intron 30.0%
!! CCGTTATATTAAGGTTTTAG+AGG + chr3_3:37038573-37038592 None:intergenic 30.0%
CTAAAACCTTAATATAACGG+CGG - chr3_3:37038573-37038592 Msa0450830:intron 30.0%
TAAAACCTTAATATAACGGC+GGG - chr3_3:37038574-37038593 Msa0450830:intron 30.0%
!! AGCATGCAATTTTCTTGTTT+TGG + chr3_3:37038691-37038710 None:intergenic 30.0%
ATTTCAAAGATTGGTAAGCT+TGG + chr3_3:37038794-37038813 None:intergenic 30.0%
! AATTTTTACCTGCAGTAAAC+TGG + chr3_3:37039013-37039032 None:intergenic 30.0%
GCAGGTAAAAATTTGATGTA+TGG - chr3_3:37039020-37039039 Msa0450830:intron 30.0%
AGTTATATCCGTATTTACCT+GGG + chr3_3:37039220-37039239 None:intergenic 30.0%
AAGTTATATCCGTATTTACC+TGG + chr3_3:37039221-37039240 None:intergenic 30.0%
TCTCCTTAAAAGAAGAAGTT+AGG - chr3_3:37039370-37039389 Msa0450830:intron 30.0%
! TGTCCTAACTTCTTCTTTTA+AGG + chr3_3:37039376-37039395 None:intergenic 30.0%
ATCCACATTAAGACAAACAT+TGG - chr3_3:37039828-37039847 Msa0450830:intron 30.0%
TTCCAATGTTTGTCTTAATG+TGG + chr3_3:37039833-37039852 None:intergenic 30.0%
ATTAAGACAAACATTGGAAG+AGG - chr3_3:37039834-37039853 Msa0450830:intron 30.0%
TATATCGAAAATTCAAGGCA+AGG - chr3_3:37039891-37039910 Msa0450830:intron 30.0%
! ATAAAAATTGCTGGTGATGT+AGG - chr3_3:37039915-37039934 Msa0450830:intron 30.0%
! GCATTGACAAATCAGATTAA+AGG - chr3_3:37040240-37040259 Msa0450830:CDS 30.0%
ACACTTGAAGAGAGTAAAAT+CGG + chr3_3:37040420-37040439 None:intergenic 30.0%
ACTGAAAACCAGAAACAATG+TGG + chr3_3:37034732-37034751 None:intergenic 35.0%
TATTTATGGAAAGAAAGCGG+TGG + chr3_3:37034799-37034818 None:intergenic 35.0%
TATTGTAGTTAGATGCTAGG+TGG + chr3_3:37034862-37034881 None:intergenic 35.0%
TGCTATTGTAGTTAGATGCT+AGG + chr3_3:37034865-37034884 None:intergenic 35.0%
AATAAGGAAAAGGAGGAAAG+TGG + chr3_3:37034924-37034943 None:intergenic 35.0%
TCATATTCCACAACATGTTC+CGG - chr3_3:37034974-37034993 Msa0450830:exon 35.0%
! ACGATTTCCATAACCGATTT+CGG - chr3_3:37035025-37035044 Msa0450830:CDS 35.0%
! GATGTCTAGCTTAGCAATAT+AGG + chr3_3:37035456-37035475 None:intergenic 35.0%
ACAATTGTTTGTGTTTCACC+TGG - chr3_3:37035501-37035520 Msa0450830:CDS 35.0%
GGAGAGTGATAACAAGTTTA+AGG - chr3_3:37035929-37035948 Msa0450830:intron 35.0%
GGAGAGTGATAACAAGTTTA+AGG - chr3_3:37035929-37035948 Msa0450830:intron 35.0%
CTAGATTCATACATCTAGAG+TGG - chr3_3:37036352-37036371 Msa0450830:intron 35.0%
! TCATACATCTAGAGTGGTAT+TGG - chr3_3:37036358-37036377 Msa0450830:intron 35.0%
! CATACATCTAGAGTGGTATT+GGG - chr3_3:37036359-37036378 Msa0450830:intron 35.0%
!! ATTTTAGTCCTTTCATGCTC+AGG + chr3_3:37036645-37036664 None:intergenic 35.0%
CATGAAAGGACTAAAATCAG+TGG - chr3_3:37036648-37036667 Msa0450830:intron 35.0%
!! AATCAGTGGACTAAAATCAG+TGG - chr3_3:37036662-37036681 Msa0450830:intron 35.0%
! TTTGCAACTGAACTTGTTTG+GGG - chr3_3:37037477-37037496 Msa0450830:intron 35.0%
GGTCGGTATGTATTTATAAC+CGG + chr3_3:37037530-37037549 None:intergenic 35.0%
CACTCTTTAAGCCCTTTAAA+TGG + chr3_3:37037733-37037752 None:intergenic 35.0%
! AATCCCATATTTGGAATAGG+AGG - chr3_3:37038000-37038019 Msa0450830:intron 35.0%
AGTCCTCCTATTCCAAATAT+GGG + chr3_3:37038006-37038025 None:intergenic 35.0%
TAGTCCTCCTATTCCAAATA+TGG + chr3_3:37038007-37038026 None:intergenic 35.0%
GTGGATTTAAATGTGATTGG+AGG - chr3_3:37038084-37038103 Msa0450830:intron 35.0%
! GATGGTAAAGGTGCAATTAA+AGG + chr3_3:37038272-37038291 None:intergenic 35.0%
ATTGCACCTTTACCATCTTA+TGG - chr3_3:37038275-37038294 Msa0450830:intron 35.0%
AAATTCCCGCCGTTATATTA+AGG + chr3_3:37038582-37038601 None:intergenic 35.0%
GTGAGAATGGAACAATTGAT+GGG - chr3_3:37038849-37038868 Msa0450830:intron 35.0%
!! TTTTCAAGAATTCTCCCTTC+TGG - chr3_3:37038978-37038997 Msa0450830:intron 35.0%
ACTGGATGTATATTCCAGAA+GGG + chr3_3:37038995-37039014 None:intergenic 35.0%
AACTGGATGTATATTCCAGA+AGG + chr3_3:37038996-37039015 None:intergenic 35.0%
ATATACATCCAGTTTACTGC+AGG - chr3_3:37039002-37039021 Msa0450830:intron 35.0%
AAAATGCATCATAGGGATAG+AGG - chr3_3:37039084-37039103 Msa0450830:intron 35.0%
! TGTTCGATATGTCACGATTT+TGG - chr3_3:37039160-37039179 Msa0450830:intron 35.0%
! TAAGTTTGGAGCTAGACTTA+AGG + chr3_3:37039248-37039267 None:intergenic 35.0%
!! TGATCTTTATATTGGCTCCT+TGG - chr3_3:37039296-37039315 Msa0450830:intron 35.0%
AAGTTCAAATGTCTGCATAG+AGG - chr3_3:37039593-37039612 Msa0450830:intron 35.0%
AGGCAAGGAATAAAAATTGC+TGG - chr3_3:37039906-37039925 Msa0450830:intron 35.0%
ATTGTAATTCCCTTCACAAC+TGG + chr3_3:37039978-37039997 None:intergenic 35.0%
AAAACATCAGAACACTTCCA+AGG + chr3_3:37040128-37040147 None:intergenic 35.0%
!!! TGGAAGTGTTCTGATGTTTT+TGG - chr3_3:37040128-37040147 Msa0450830:CDS 35.0%
! TTTCACAAAAGGTTAGTCCT+TGG - chr3_3:37040153-37040172 Msa0450830:CDS 35.0%
! AATCGGTTATTTCAAGACTC+AGG + chr3_3:37040403-37040422 None:intergenic 35.0%
GGCAGAGATAGAAGAGAAAT+AGG + chr3_3:37034954-37034973 None:intergenic 40.0%
GGAACATGTTGTGGAATATG+AGG + chr3_3:37034975-37034994 None:intergenic 40.0%
ATCGGTTATGGAAATCGTGT+CGG + chr3_3:37035023-37035042 None:intergenic 40.0%
! ATTTCCATAACCGATTTCGG+CGG - chr3_3:37035028-37035047 Msa0450830:CDS 40.0%
CATTCAGGGCAGCTATTTAT+AGG - chr3_3:37035083-37035102 Msa0450830:CDS 40.0%
ATGACTCTTTATCTTGCTGC+TGG - chr3_3:37035193-37035212 Msa0450830:CDS 40.0%
TGCTGTTATTAAAGCCACAC+AGG - chr3_3:37035216-37035235 Msa0450830:CDS 40.0%
! AGGTATTGCTAATCGAGCTT+AGG + chr3_3:37035436-37035455 None:intergenic 40.0%
TTGTGTTTCACCTGGTAAAG+TGG - chr3_3:37035509-37035528 Msa0450830:CDS 40.0%
!!! TTTTTTTGTGCTTCGCCTCT+GGG + chr3_3:37036945-37036964 None:intergenic 40.0%
!!! TTTTTTTTGTGCTTCGCCTC+TGG + chr3_3:37036946-37036965 None:intergenic 40.0%
CCTCTTCCATAAGATGGTAA+AGG + chr3_3:37038284-37038303 None:intergenic 40.0%
CCTTTACCATCTTATGGAAG+AGG - chr3_3:37038281-37038300 Msa0450830:intron 40.0%
TACCATCTTATGGAAGAGGA+AGG - chr3_3:37038285-37038304 Msa0450830:intron 40.0%
ACCATCTTATGGAAGAGGAA+GGG - chr3_3:37038286-37038305 Msa0450830:intron 40.0%
AACTGATATACCTTCCTCCT+GGG + chr3_3:37038316-37038335 None:intergenic 40.0%
AAACTGATATACCTTCCTCC+TGG + chr3_3:37038317-37038336 None:intergenic 40.0%
TCATATCTCACCAGTGAGTA+TGG - chr3_3:37038414-37038433 Msa0450830:intron 40.0%
CAACTTAGAACCATACTCAC+TGG + chr3_3:37038427-37038446 None:intergenic 40.0%
!! GTGAGTATGGTTCTAAGTTG+TGG - chr3_3:37038427-37038446 Msa0450830:intron 40.0%
!! ATGGTTCTAAGTTGTGGATC+TGG - chr3_3:37038433-37038452 Msa0450830:intron 40.0%
CAGCAAAATGTGACGAAATG+TGG - chr3_3:37038491-37038510 Msa0450830:intron 40.0%
CAGTTTCACAACCACTATTG+TGG + chr3_3:37038541-37038560 None:intergenic 40.0%
GGTGAGAATGGAACAATTGA+TGG - chr3_3:37038848-37038867 Msa0450830:intron 40.0%
! AATGGAACAATTGATGGGCA+AGG - chr3_3:37038854-37038873 Msa0450830:intron 40.0%
CAACAACATTGCTGCAATGA+AGG + chr3_3:37039142-37039161 None:intergenic 40.0%
GGAATTGACCCAGGTAAATA+CGG - chr3_3:37039209-37039228 Msa0450830:intron 40.0%
GAGGACTCATACATATCAAC+AGG - chr3_3:37039612-37039631 Msa0450830:intron 40.0%
ATCAACAGGAGATGATCTTG+TGG - chr3_3:37039626-37039645 Msa0450830:intron 40.0%
!! GTTGAAGAGGTTGATGTGTT+CGG + chr3_3:37039796-37039815 None:intergenic 40.0%
ACACATCAACCTCTTCAACA+TGG - chr3_3:37039797-37039816 Msa0450830:intron 40.0%
CACATCAACCTCTTCAACAT+GGG - chr3_3:37039798-37039817 Msa0450830:intron 40.0%
AAGACAAACATTGGAAGAGG+AGG - chr3_3:37039837-37039856 Msa0450830:intron 40.0%
! TCACAACTGGTAGAGCATTA+GGG + chr3_3:37039965-37039984 None:intergenic 40.0%
! TTCACAACTGGTAGAGCATT+AGG + chr3_3:37039966-37039985 None:intergenic 40.0%
TAATGCTCTACCAGTTGTGA+AGG - chr3_3:37039965-37039984 Msa0450830:intron 40.0%
AATGCTCTACCAGTTGTGAA+GGG - chr3_3:37039966-37039985 Msa0450830:intron 40.0%
!! TTGCAAGCTGGTTTGATACA+TGG - chr3_3:37040023-37040042 Msa0450830:CDS 40.0%
ATTAACCTTCATGGTGAGAC+AGG - chr3_3:37040086-37040105 Msa0450830:CDS 40.0%
GAATAATTGGTACAAGACCC+AGG + chr3_3:37040206-37040225 None:intergenic 40.0%
TGTTAACGATTTCTTCGTGC+CGG - chr3_3:37040337-37040356 Msa0450830:five_prime_UTR 40.0%
AGGAAAAGGAGGAAAGTGGA+GGG + chr3_3:37034920-37034939 None:intergenic 45.0%
AAGGAAAAGGAGGAAAGTGG+AGG + chr3_3:37034921-37034940 None:intergenic 45.0%
!! GCTGAACTCAAAGGCATTCA+GGG - chr3_3:37035069-37035088 Msa0450830:CDS 45.0%
ATTCAGCACTTAAGGAGACG+TGG - chr3_3:37035106-37035125 Msa0450830:CDS 45.0%
GTGATAAGGACCACTTTACC+AGG + chr3_3:37035522-37035541 None:intergenic 45.0%
! CTAGAGTGGTATTGGGAATG+CGG - chr3_3:37036366-37036385 Msa0450830:intron 45.0%
!! CAGTGGACTAAAATCAGTGG+TGG - chr3_3:37036665-37036684 Msa0450830:intron 45.0%
TGGACTAAAATCAGTGGTGG+TGG - chr3_3:37036668-37036687 Msa0450830:intron 45.0%
GGACTAAAATCAGTGGTGGT+GGG - chr3_3:37036669-37036688 Msa0450830:intron 45.0%
!!! TTTTTTGTGCTTCGCCTCTG+GGG + chr3_3:37036944-37036963 None:intergenic 45.0%
!! TATGCTTAAAAAGTGCCCCG+GGG + chr3_3:37037627-37037646 None:intergenic 45.0%
!! GTATGCTTAAAAAGTGCCCC+GGG + chr3_3:37037628-37037647 None:intergenic 45.0%
!! GGTATGCTTAAAAAGTGCCC+CGG + chr3_3:37037629-37037648 None:intergenic 45.0%
GAAATGTTTACGAGTGCCTC+GGG + chr3_3:37037757-37037776 None:intergenic 45.0%
GGAAATGTTTACGAGTGCCT+CGG + chr3_3:37037758-37037777 None:intergenic 45.0%
TCCCTTCCTCTTCCATAAGA+TGG + chr3_3:37038290-37038309 None:intergenic 45.0%
!! ATCAGTTTTATCCACGGCGA+TGG - chr3_3:37038329-37038348 Msa0450830:intron 45.0%
TATTGTGGCCGATACTACTG+TGG + chr3_3:37038526-37038545 None:intergenic 45.0%
!! AGTAGTATCGGCCACAATAG+TGG - chr3_3:37038527-37038546 Msa0450830:intron 45.0%
GTGGTTGTGAAACTGTTGTG+CGG - chr3_3:37038546-37038565 Msa0450830:intron 45.0%
! TTGATGGGCAAGGAGATGTA+TGG - chr3_3:37038864-37038883 Msa0450830:intron 45.0%
! GAGATGTATGGTGGAACATG+TGG - chr3_3:37038876-37038895 Msa0450830:intron 45.0%
! ATGTATGGTGGAACATGTGG+AGG - chr3_3:37038879-37038898 Msa0450830:intron 45.0%
GGGTCAATTCCATCAGTGTT+AGG + chr3_3:37039200-37039219 None:intergenic 45.0%
AACACTGATGGAATTGACCC+AGG - chr3_3:37039200-37039219 Msa0450830:intron 45.0%
ATCACGATCCGACGTATAAC+TGG - chr3_3:37039705-37039724 Msa0450830:intron 45.0%
GAGACGATCCAGTTATACGT+CGG + chr3_3:37039716-37039735 None:intergenic 45.0%
AACCTCTTCAACATGGGAGT+TGG - chr3_3:37039804-37039823 Msa0450830:intron 45.0%
TACCAACTCCCATGTTGAAG+AGG + chr3_3:37039809-37039828 None:intergenic 45.0%
!! TAAGAGTGTTTGGGGTGTGA+AGG - chr3_3:37039998-37040017 Msa0450830:CDS 45.0%
ACATCAGAACACTTCCAAGG+TGG + chr3_3:37040125-37040144 None:intergenic 45.0%
ATACAAACACCGAACACGAC+AGG + chr3_3:37040366-37040385 None:intergenic 45.0%
!!! TTTTAAAAATAATTATTAGT+TGG - chr3_3:37035405-37035424 Msa0450830:CDS 5.0%
!! AATTATTATATATTATAATG+GGG + chr3_3:37036400-37036419 None:intergenic 5.0%
!! CAATTATTATATATTATAAT+GGG + chr3_3:37036401-37036420 None:intergenic 5.0%
!! ACAATTATTATATATTATAA+TGG + chr3_3:37036402-37036421 None:intergenic 5.0%
!! AAAAATAAAAATAAAAACTA+TGG - chr3_3:37036615-37036634 Msa0450830:intron 5.0%
!! ATCTAAAAAATTATAATTTA+TGG + chr3_3:37037046-37037065 None:intergenic 5.0%
!!! AAGAATAATATTTTTTTTTT+GGG - chr3_3:37037555-37037574 Msa0450830:intron 5.0%
ATGCTAGGTGGAGTGAGTAG+TGG + chr3_3:37034850-37034869 None:intergenic 50.0%
GGAAAAGGAGGAAAGTGGAG+GGG + chr3_3:37034919-37034938 None:intergenic 50.0%
CACTATGCCGGAACATGTTG+TGG + chr3_3:37034984-37035003 None:intergenic 50.0%
! TTATGGAAATCGTGTCGGCG+CGG + chr3_3:37035018-37035037 None:intergenic 50.0%
! ATAACCGATTTCGGCGGTGT+CGG - chr3_3:37035034-37035053 Msa0450830:CDS 50.0%
CGGCAAAACGCTGAACTCAA+AGG - chr3_3:37035060-37035079 Msa0450830:CDS 50.0%
!! CGCTGAACTCAAAGGCATTC+AGG - chr3_3:37035068-37035087 Msa0450830:CDS 50.0%
! ACACACCAGGAGGCACATAA+AGG + chr3_3:37035141-37035160 None:intergenic 50.0%
GCCTCCTGGTGTGTACTTAA+CGG - chr3_3:37035147-37035166 Msa0450830:CDS 50.0%
TCCGTTAAGTACACACCAGG+AGG + chr3_3:37035151-37035170 None:intergenic 50.0%
CTCTCCGTTAAGTACACACC+AGG + chr3_3:37035154-37035173 None:intergenic 50.0%
!! AAATCAGTGGTGGTGGGTCT+TGG - chr3_3:37036675-37036694 Msa0450830:intron 50.0%
TTGTTAACGAGTGTCCCCAG+AGG - chr3_3:37036927-37036946 Msa0450830:CDS 50.0%
CGTTGGGCAAAATGCGTTTC+AGG - chr3_3:37037221-37037240 Msa0450830:intron 50.0%
!! ATGCTTAAAAAGTGCCCCGG+GGG + chr3_3:37037626-37037645 None:intergenic 50.0%
GTTCGCGATGTGATCATCAC+AGG - chr3_3:37038353-37038372 Msa0450830:intron 50.0%
GCGATGTGATCATCACAGGT+AGG - chr3_3:37038357-37038376 Msa0450830:intron 50.0%
GTGACGAAATGTGGCTGATG+CGG - chr3_3:37038500-37038519 Msa0450830:intron 50.0%
TGATGCGGCCACAGTAGTAT+CGG - chr3_3:37038515-37038534 Msa0450830:intron 50.0%
ATGGGCAAGGAGATGTATGG+TGG - chr3_3:37038867-37038886 Msa0450830:intron 50.0%
GATCTTGTGGCTGTGAAGAG+TGG - chr3_3:37039639-37039658 Msa0450830:intron 50.0%
TTGTGGCTGTGAAGAGTGGA+TGG - chr3_3:37039643-37039662 Msa0450830:intron 50.0%
TGTGGCTGTGAAGAGTGGAT+GGG - chr3_3:37039644-37039663 Msa0450830:intron 50.0%
TCGTGATGCCATTGCTAGGA+CGG + chr3_3:37039692-37039711 None:intergenic 50.0%
ACTGGATCGTCTCCATTTGC+CGG - chr3_3:37039723-37039742 Msa0450830:intron 50.0%
GCCTGATGTTTCACTGCCTA+CGG + chr3_3:37039754-37039773 None:intergenic 50.0%
GTAGGCAGTGAAACATCAGG+CGG - chr3_3:37039753-37039772 Msa0450830:intron 50.0%
! GGTGTGAAGGTTTTGCAAGC+TGG - chr3_3:37040011-37040030 Msa0450830:CDS 50.0%
CTGATCCTGTCTCACCATGA+AGG + chr3_3:37040094-37040113 None:intergenic 50.0%
CTTCATGGTGAGACAGGATC+AGG - chr3_3:37040092-37040111 Msa0450830:CDS 50.0%
GATCAGGTAGATCTCCACCT+TGG - chr3_3:37040108-37040127 Msa0450830:CDS 50.0%
AAGGAGGAAAGTGGAGGGGA+TGG + chr3_3:37034915-37034934 None:intergenic 55.0%
GACACCGCCGAAATCGGTTA+TGG + chr3_3:37035035-37035054 None:intergenic 55.0%
CAGCACTTAAGGAGACGTGG+TGG - chr3_3:37035109-37035128 Msa0450830:CDS 55.0%
ACGCTCCTTTATGTGCCTCC+TGG - chr3_3:37035133-37035152 Msa0450830:CDS 55.0%
!! ATGGTGGGCCTGAGCATGAA+AGG - chr3_3:37036634-37036653 Msa0450830:intron 55.0%
TCATATGGGAGGGGTAGCCA+AGG + chr3_3:37037584-37037603 None:intergenic 55.0%
TGGCTACCCCTCCCATATGA+AGG - chr3_3:37037584-37037603 Msa0450830:intron 55.0%
GGCTACCCCTCCCATATGAA+GGG - chr3_3:37037585-37037604 Msa0450830:intron 55.0%
CGTAGCCCTTCATATGGGAG+GGG + chr3_3:37037593-37037612 None:intergenic 55.0%
GCGTAGCCCTTCATATGGGA+GGG + chr3_3:37037594-37037613 None:intergenic 55.0%
! AGGGGCGTAGCCCTTCATAT+GGG + chr3_3:37037598-37037617 None:intergenic 55.0%
!! AGGGCTTAAAGAGTGTCCCG+AGG - chr3_3:37037738-37037757 Msa0450830:intron 55.0%
TCAGTGTTAGGAGAGTCGCG+AGG + chr3_3:37039188-37039207 None:intergenic 55.0%
CGCGACTCTCCTAACACTGA+TGG - chr3_3:37039188-37039207 Msa0450830:intron 55.0%
TCATACGGCCGTCCTAGCAA+TGG - chr3_3:37039681-37039700 Msa0450830:intron 55.0%
CGGATCGTGATGCCATTGCT+AGG + chr3_3:37039696-37039715 None:intergenic 55.0%
TTCACTGCCTACGGCAATGC+CGG + chr3_3:37039745-37039764 None:intergenic 55.0%
GCCGTAGGCAGTGAAACATC+AGG - chr3_3:37039750-37039769 Msa0450830:intron 55.0%
CTCAGCTGAGAACATGGCCA+AGG + chr3_3:37040173-37040192 None:intergenic 55.0%
TGGCTGCTCAGCTGAGAACA+TGG + chr3_3:37040179-37040198 None:intergenic 55.0%
TGGTACAAGACCCAGGCTCT+TGG + chr3_3:37040199-37040218 None:intergenic 55.0%
GTGTCGGAACGGCACTATGC+CGG + chr3_3:37034996-37035015 None:intergenic 60.0%
! AAATCGTGTCGGCGCGGTGT+CGG + chr3_3:37035012-37035031 None:intergenic 60.0%
!! GTGGTGGGTCTTGGTCTGCA+TGG - chr3_3:37036684-37036703 Msa0450830:intron 60.0%
GGCGTAGCCCTTCATATGGG+AGG + chr3_3:37037595-37037614 None:intergenic 60.0%
! CAGGGGCGTAGCCCTTCATA+TGG + chr3_3:37037599-37037618 None:intergenic 60.0%
CCTACGGCAATGCCGGCAAA+TGG + chr3_3:37039738-37039757 None:intergenic 60.0%
CCATTTGCCGGCATTGCCGT+AGG - chr3_3:37039735-37039754 Msa0450830:intron 60.0%
AGCTGAGCAGCCAAGAGCCT+GGG - chr3_3:37040186-37040205 Msa0450830:CDS 60.0%
TGCCGGTGTCCTGTCGTGTT+CGG - chr3_3:37040354-37040373 Msa0450830:five_prime_UTR 60.0%
CACCGAACACGACAGGACAC+CGG + chr3_3:37040359-37040378 None:intergenic 60.0%
GTCGCCGACACCGCCGAAAT+CGG + chr3_3:37035041-37035060 None:intergenic 65.0%
!! GATTTCGGCGGTGTCGGCGA+CGG - chr3_3:37035040-37035059 Msa0450830:CDS 65.0%
GGAAGAGGAAGGGAGCTCCC+AGG - chr3_3:37038296-37038315 Msa0450830:intron 65.0%
AGAGGAAGGGAGCTCCCAGG+AGG - chr3_3:37038299-37038318 Msa0450830:intron 65.0%
GAAGGGAGCTCCCAGGAGGA+AGG - chr3_3:37038303-37038322 Msa0450830:intron 65.0%
CATCGCGAACTCCATCGCCG+TGG + chr3_3:37038343-37038362 None:intergenic 65.0%
CAGCTGAGCAGCCAAGAGCC+TGG - chr3_3:37040185-37040204 Msa0450830:CDS 65.0%
! GTGTCGGCGCGGTGTCGGAA+CGG + chr3_3:37035007-37035026 None:intergenic 70.0%
!! AAGTGCCCCGGGGGCACTCA+GGG + chr3_3:37037617-37037636 None:intergenic 70.0%
!! AAAGTGCCCCGGGGGCACTC+AGG + chr3_3:37037618-37037637 None:intergenic 70.0%
GCTACGCCCCTGAGTGCCCC+CGG - chr3_3:37037607-37037626 Msa0450830:intron 75.0%
CTACGCCCCTGAGTGCCCCC+GGG - chr3_3:37037608-37037627 Msa0450830:intron 75.0%
TACGCCCCTGAGTGCCCCCG+GGG - chr3_3:37037609-37037628 Msa0450830:intron 75.0%
!! AGTGCCCCGGGGGCACTCAG+GGG + chr3_3:37037616-37037635 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 37034670 37040536 37034670 ID=Msa0450830;Name=Msa0450830
chr3_3 mRNA 37034670 37040536 37034670 ID=Msa0450830-mRNA-1;Parent=Msa0450830;Name=Msa0450830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=220|1|1|1|1|1|5|307|451
chr3_3 exon 37034670 37035617 37034670 ID=Msa0450830-mRNA-1:exon:6738;Parent=Msa0450830-mRNA-1
chr3_3 exon 37035985 37036055 37035985 ID=Msa0450830-mRNA-1:exon:6737;Parent=Msa0450830-mRNA-1
chr3_3 exon 37036183 37036357 37036183 ID=Msa0450830-mRNA-1:exon:6736;Parent=Msa0450830-mRNA-1
chr3_3 exon 37036832 37036952 37036832 ID=Msa0450830-mRNA-1:exon:6735;Parent=Msa0450830-mRNA-1
chr3_3 exon 37039969 37040536 37039969 ID=Msa0450830-mRNA-1:exon:6734;Parent=Msa0450830-mRNA-1
chr3_3 five_prime_UTR 37040317 37040536 37040317 ID=Msa0450830-mRNA-1:five_prime_utr;Parent=Msa0450830-mRNA-1
chr3_3 CDS 37039969 37040316 37039969 ID=Msa0450830-mRNA-1:cds;Parent=Msa0450830-mRNA-1
chr3_3 CDS 37036832 37036952 37036832 ID=Msa0450830-mRNA-1:cds;Parent=Msa0450830-mRNA-1
chr3_3 CDS 37036183 37036357 37036183 ID=Msa0450830-mRNA-1:cds;Parent=Msa0450830-mRNA-1
chr3_3 CDS 37035985 37036055 37035985 ID=Msa0450830-mRNA-1:cds;Parent=Msa0450830-mRNA-1
chr3_3 CDS 37034977 37035617 37034977 ID=Msa0450830-mRNA-1:cds;Parent=Msa0450830-mRNA-1
chr3_3 three_prime_UTR 37034670 37034976 37034670 ID=Msa0450830-mRNA-1:three_prime_utr;Parent=Msa0450830-mRNA-1
Gene Sequence

>Msa0450830

ATGCATCTTCTCTCAAAATCTTCCATCCCCTCCACTTTCCTCCTTTTCCTTATTTTCTTCTCCTATTTCTCTTCTATCTCTGCCTCATATTCCACAACATGTTCCGGCATAGTGCCGTTCCGACACCGCGCCGACACGATTTCCATAACCGATTTCGGCGGTGTCGGCGACGGCAAAACGCTGAACTCAAAGGCATTCAGGGCAGCTATTTATAGGATTCAGCACTTAAGGAGACGTGGTGGTACGCTCCTTTATGTGCCTCCTGGTGTGTACTTAACGGAGAGCTTCAATCTCACTAGTCATATGACTCTTTATCTTGCTGCTGGTGCTGTTATTAAAGCCACACAGAGGTTATGGAATTGGCCTTTAATTGCACCTTTACCATCTTATGGAAGAGGAAGGGAGCTCCCAGGAGGAAGGTATATCAGTTTTATCCACGGCGATGGAGTTCGCGATGTGATCATCACAGGTGAGAATGGAACAATTGATGGGCAAGGAGATGTATGGTGGAACATGTGGAGGCAGAGAACTCTTCAATTTACAAGACCAAACCTTGTTGAATTTTTGAATTCAAGAAATATTATTATTTCAAATGTTATTTTCAAGAATTCTCCCTTCTGGAATATACATCCAGTTTACTGCAGCAATGTTGTTGTTCGATATGTCACGATTTTGGCTCCTCGCGACTCTCCTAACACTGATGGAATTGACCCAGATTCAAGTTCAAATGTCTGCATAGAGGACTCATACATATCAACAGGAGATGATCTTGTGGCTGTGAAGAGTGGATGGGATGAATACGGTATTTCATACGGCCGTCCTAGCAATGGCATCACGATCCGACGTATAACTGGATCGTCTCCATTTGCCGGCATTGCCGTAGGCAGTGAAACATCAGGCGGAGTACAGAATGTACTCGCCGAACACATCAACCTCTTCAACATGGGAGTTGGTATCCACATTAAGACAAACATTGGAAGAGGAGGACTTATCAAGAATATAACAGTGTCTAATGTGTATATCGAAAATTCAAGGCAAGGAATAAAAATTGCTGGTGATGTAGGTGATCATCCAGATGAAAATTTTAACCCTAATGCTCTACCAGTTGTGAAGGGAATTACAATTAAGAGTGTTTGGGGTGTGAAGGTTTTGCAAGCTGGTTTGATACATGGTTTGAGAAATTCACCTTTTTCTGAGATTTGTTTCTATGATATTAACCTTCATGGTGAGACAGGATCAGGTAGATCTCCACCTTGGAAGTGTTCTGATGTTTTTGGATTTTCACAAAAGGTTAGTCCTTGGCCATGTTCTCAGCTGAGCAGCCAAGAGCCTGGGTCTTGTACCAATTATTCATGA
Protein sequence

>Msa0450830

MHLLSKSSIPSTFLLFLIFFSYFSSISASYSTTCSGIVPFRHRADTISITDFGGVGDGKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQRLWNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGISYGRPSNGITIRRITGSSPFAGIAVGSETSGGVQNVLAEHINLFNMGVGIHIKTNIGRGGLIKNITVSNVYIENSRQGIKIAGDVGDHPDENFNPNALPVVKGITIKSVWGVKVLQAGLIHGLRNSPFSEICFYDINLHGETGSGRSPPWKCSDVFGFSQKVSPWPCSQLSSQEPGSCTNYS*