AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0614650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614650 MtrunA17_Chr4g0050781 97.653 213 1 2 7 217 1 211 1.05e-138 386
Msa0614650 MtrunA17_Chr1g0210241 43.382 136 73 3 7 141 1 133 4.21e-31 115
Msa0614650 MtrunA17_Chr4g0035031 59.524 84 34 0 8 91 3 86 9.28e-30 109
Msa0614650 MtrunA17_Chr4g0035001 58.228 79 33 0 12 90 5 83 1.07e-28 105
Msa0614650 MtrunA17_Chr4g0035051 55.696 79 35 0 12 90 7 85 8.13e-27 99.4
Msa0614650 MtrunA17_Chr7g0266751 43.038 79 45 0 13 91 32 110 9.54e-19 79.3
Msa0614650 MtrunA17_Chr3g0086861 40.476 84 50 0 7 90 38 121 7.74e-18 81.3
Msa0614650 MtrunA17_Chr3g0119311 47.368 76 40 0 14 89 37 112 2.01e-17 75.5
Msa0614650 MtrunA17_Chr3g0116631 45.455 88 46 1 10 95 203 290 5.35e-17 77.8
Msa0614650 MtrunA17_Chr1g0168601 41.975 81 47 0 10 90 150 230 9.51e-17 76.3
Msa0614650 MtrunA17_Chr7g0263001 46.250 80 43 0 14 93 36 115 1.07e-16 73.9
Msa0614650 MtrunA17_Chr1g0198431 44.156 77 43 0 14 90 193 269 2.04e-16 75.9
Msa0614650 MtrunA17_Chr4g0061451 36.905 84 53 0 7 90 36 119 3.13e-16 75.1
Msa0614650 MtrunA17_Chr7g0219021 40.789 76 45 0 14 89 41 116 3.70e-16 74.7
Msa0614650 MtrunA17_Chr3g0121631 41.975 81 46 1 14 94 37 116 1.47e-15 70.9
Msa0614650 MtrunA17_Chr2g0327921 39.326 89 54 0 7 95 1 89 4.17e-15 68.2
Msa0614650 MtrunA17_Chr4g0017401 46.479 71 37 1 9 78 12 82 4.36e-15 72.0
Msa0614650 MtrunA17_Chr7g0276531 45.833 72 35 1 9 76 14 85 1.24e-14 70.9
Msa0614650 MtrunA17_Chr6g0481071 41.026 78 46 0 14 91 96 173 1.34e-14 69.3
Msa0614650 MtrunA17_Chr3g0101061 30.894 123 79 3 3 122 30 149 3.26e-14 70.9
Msa0614650 MtrunA17_Chr3g0101061 35.366 82 52 1 14 95 141 221 5.51e-11 61.2
Msa0614650 MtrunA17_Chr8g0346011 40.741 81 41 2 8 82 26 105 3.35e-14 70.1
Msa0614650 MtrunA17_Chr1g0181111 46.053 76 41 0 14 89 197 272 5.00e-14 69.3
Msa0614650 MtrunA17_Chr4g0058151 43.590 78 44 0 13 90 216 293 8.80e-14 68.9
Msa0614650 MtrunA17_Chr4g0058151 39.080 87 52 1 5 91 115 200 5.24e-13 66.6
Msa0614650 MtrunA17_Chr3g0088511 32.353 102 64 1 14 115 33 129 1.03e-13 65.9
Msa0614650 MtrunA17_Chr3g0144311 46.154 65 35 0 2 66 18 82 1.15e-13 68.2
Msa0614650 MtrunA17_Chr2g0290191 35.556 90 51 2 14 103 5 87 1.68e-13 68.6
Msa0614650 MtrunA17_Chr2g0290191 36.709 79 49 1 14 92 107 184 8.95e-13 66.6
Msa0614650 MtrunA17_Chr5g0447761 31.034 116 74 3 10 122 3 115 2.38e-13 68.2
Msa0614650 MtrunA17_Chr5g0447761 36.585 82 51 1 14 95 107 187 1.96e-12 65.5
Msa0614650 MtrunA17_Chr6g0449481 31.325 83 57 0 14 96 134 216 2.43e-13 68.2
Msa0614650 MtrunA17_Chr1g0186351 39.241 79 47 1 14 92 113 190 3.54e-13 67.8
Msa0614650 MtrunA17_Chr1g0186351 33.333 81 52 1 9 89 2 80 7.92e-12 63.9
Msa0614650 MtrunA17_Chr3g0120721 35.000 80 52 0 14 93 107 186 8.91e-13 66.2
Msa0614650 MtrunA17_Chr4g0042161 42.353 85 43 2 10 91 48 129 9.13e-13 63.5
Msa0614650 MtrunA17_Chr7g0267571 37.662 77 48 0 13 89 212 288 1.06e-12 65.9
Msa0614650 MtrunA17_Chr7g0268551 39.189 74 45 0 15 88 350 423 1.73e-12 65.9
Msa0614650 MtrunA17_Chr5g0426311 42.029 69 39 1 14 82 17 84 1.82e-12 65.1
Msa0614650 MtrunA17_Chr3g0135111 36.364 88 53 2 14 100 118 203 3.28e-12 64.7
Msa0614650 MtrunA17_Chr4g0031091 34.524 84 55 0 3 86 23 106 4.05e-12 60.8
Msa0614650 MtrunA17_Chr4g0065741 36.471 85 52 1 14 98 72 154 5.71e-12 61.6
Msa0614650 MtrunA17_Chr3g0080801 28.030 132 79 3 15 146 70 185 1.04e-11 62.8
Msa0614650 MtrunA17_Chr5g0419351 30.645 124 73 3 15 128 12 132 1.17e-11 60.8
Msa0614650 MtrunA17_Chr3g0110211 44.737 76 41 1 15 89 114 189 1.24e-11 63.2
Msa0614650 MtrunA17_Chr1g0177101 33.333 90 60 0 13 102 207 296 2.69e-11 62.0
Msa0614650 MtrunA17_Chr8g0371201 40.789 76 45 0 15 90 64 139 3.18e-11 61.2
Msa0614650 MtrunA17_Chr2g0281891 32.222 90 61 0 14 103 299 388 7.13e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614650 AT3G26420.1 53.755 253 62 7 7 214 1 243 1.09e-68 211
Msa0614650 AT4G39260.3 60.976 82 32 0 10 91 3 84 1.74e-30 108
Msa0614650 AT4G39260.1 61.728 81 31 0 10 90 3 83 5.01e-29 107
Msa0614650 AT2G21660.2 60.759 79 31 0 12 90 7 85 1.07e-28 105
Msa0614650 AT2G21660.1 60.759 79 31 0 12 90 7 85 1.69e-28 105
Msa0614650 AT1G60650.2 41.221 131 68 3 12 142 11 132 1.95e-28 108
Msa0614650 AT1G60650.1 41.221 131 68 3 12 142 11 132 1.95e-28 108
Msa0614650 AT5G04280.1 38.953 172 87 4 7 165 1 167 1.67e-25 101
Msa0614650 AT4G39260.4 60.606 66 26 0 10 75 3 68 2.56e-22 87.8
Msa0614650 AT4G13850.3 46.429 84 45 0 14 97 36 119 4.64e-19 80.5
Msa0614650 AT4G13850.2 46.429 84 45 0 14 97 36 119 5.78e-19 80.5
Msa0614650 AT4G13850.1 46.429 84 45 0 14 97 36 119 6.50e-19 80.5
Msa0614650 AT4G13850.4 49.351 77 39 0 14 90 36 112 7.05e-19 79.7
Msa0614650 AT3G23830.2 43.023 86 49 0 14 99 36 121 4.19e-18 77.8
Msa0614650 AT3G23830.1 43.023 86 49 0 14 99 36 121 4.19e-18 77.8
Msa0614650 AT2G37220.1 48.052 77 40 0 14 90 205 281 8.85e-18 80.1
Msa0614650 AT2G37220.1 38.202 89 53 1 12 100 90 176 3.59e-12 64.7
Msa0614650 AT3G53460.1 46.753 77 41 0 14 90 258 334 6.45e-17 78.6
Msa0614650 AT3G53460.3 46.753 77 41 0 14 90 258 334 6.45e-17 78.6
Msa0614650 AT3G53460.2 46.753 77 41 0 14 90 258 334 6.45e-17 78.6
Msa0614650 AT5G06210.1 42.500 80 46 0 14 93 35 114 8.03e-17 74.7
Msa0614650 AT5G61030.2 43.421 76 43 0 14 89 41 116 8.23e-17 77.8
Msa0614650 AT5G61030.1 43.421 76 43 0 14 89 41 116 8.23e-17 77.8
Msa0614650 AT3G53460.4 46.753 77 41 0 14 90 279 355 9.13e-17 78.2
Msa0614650 AT1G18630.1 50.000 76 38 0 14 89 37 112 1.02e-16 74.7
Msa0614650 AT1G33470.3 47.945 73 37 1 7 78 1 73 5.34e-16 74.7
Msa0614650 AT1G33470.1 47.945 73 37 1 7 78 1 73 6.53e-16 74.3
Msa0614650 AT1G33470.2 47.945 73 37 1 7 78 1 73 6.98e-16 74.3
Msa0614650 AT2G46780.1 44.186 86 40 2 4 82 6 90 9.58e-16 75.1
Msa0614650 AT2G46780.2 44.186 86 40 2 4 82 6 90 9.58e-16 75.1
Msa0614650 AT4G24770.1 43.210 81 46 0 10 90 241 321 1.87e-15 74.3
Msa0614650 AT4G24770.1 38.272 81 50 0 11 91 148 228 1.97e-12 65.5
Msa0614650 AT4G24770.2 43.210 81 46 0 10 90 241 321 1.87e-15 74.3
Msa0614650 AT4G24770.2 38.272 81 50 0 11 91 148 228 1.97e-12 65.5
Msa0614650 AT1G22910.1 46.575 73 38 1 7 78 7 79 1.88e-15 73.2
Msa0614650 AT1G22910.2 46.575 73 38 1 7 78 7 79 2.76e-15 72.8
Msa0614650 AT5G47320.1 35.922 103 64 1 14 114 32 134 2.87e-15 72.0
Msa0614650 AT5G04280.3 40.299 134 62 4 45 165 1 129 3.52e-15 72.8
Msa0614650 AT5G04280.4 40.299 134 62 4 45 165 1 129 3.52e-15 72.8
Msa0614650 AT5G04280.5 40.299 134 62 4 45 165 1 129 3.52e-15 72.8
Msa0614650 AT5G04280.2 40.299 134 62 4 45 165 1 129 3.52e-15 72.8
Msa0614650 AT1G60000.1 41.667 84 49 0 7 90 171 254 3.92e-15 72.4
Msa0614650 AT5G59865.1 43.038 79 45 0 14 92 27 105 4.24e-15 69.3
Msa0614650 AT2G21690.1 46.377 69 37 0 7 75 1 69 5.95e-15 68.9
Msa0614650 AT1G73530.1 35.514 107 61 2 14 117 78 179 7.56e-15 70.1
Msa0614650 AT1G22910.3 46.575 73 38 1 7 78 7 79 1.70e-14 71.6
Msa0614650 AT1G60650.3 36.538 104 57 3 39 142 1 95 2.11e-14 70.5
Msa0614650 AT2G37510.1 50.000 74 37 0 14 87 35 108 2.20e-14 68.2
Msa0614650 AT3G20930.1 41.558 77 45 0 14 90 283 359 4.03e-14 70.9
Msa0614650 AT1G74230.1 43.421 76 42 1 14 89 35 109 6.99e-14 69.3
Msa0614650 AT3G08000.1 44.737 76 42 0 14 89 42 117 7.49e-14 66.6
Msa0614650 AT1G03457.3 41.096 73 43 0 15 87 227 299 8.27e-14 69.3
Msa0614650 AT1G60650.4 38.776 98 51 3 45 142 1 89 1.15e-13 68.2
Msa0614650 AT3G13224.2 32.143 84 57 0 14 97 110 193 1.19e-13 69.3
Msa0614650 AT4G14300.1 37.805 82 49 1 9 90 2 81 1.23e-13 69.3
Msa0614650 AT4G14300.1 36.709 79 49 1 14 92 111 188 6.35e-12 64.3
Msa0614650 AT4G14300.2 37.805 82 49 1 9 90 2 81 1.23e-13 69.3
Msa0614650 AT4G14300.2 36.709 79 49 1 14 92 111 188 6.35e-12 64.3
Msa0614650 AT1G78260.1 43.478 69 38 1 14 82 18 85 1.29e-13 68.6
Msa0614650 AT4G26650.2 32.500 120 73 3 3 121 1 113 1.38e-13 69.3
Msa0614650 AT4G13860.1 42.466 73 42 0 14 86 4 76 1.53e-13 64.3
Msa0614650 AT4G26650.1 32.456 114 70 2 8 121 10 116 1.63e-13 69.3
Msa0614650 AT3G07810.2 34.568 81 51 1 11 91 4 82 1.78e-13 68.9
Msa0614650 AT3G07810.2 37.805 82 50 1 14 95 109 189 1.97e-12 65.9
Msa0614650 AT3G07810.1 34.568 81 51 1 11 91 4 82 2.01e-13 68.9
Msa0614650 AT3G07810.1 37.805 82 50 1 14 95 109 189 2.14e-12 65.9
Msa0614650 AT3G13224.3 32.143 84 57 0 14 97 101 184 2.30e-13 68.6
Msa0614650 AT1G76460.1 46.377 69 36 1 14 82 25 92 2.32e-13 67.8
Msa0614650 AT1G03457.2 41.667 72 42 0 16 87 342 413 2.56e-13 68.6
Msa0614650 AT1G03457.1 41.096 73 43 0 15 87 332 404 2.60e-13 68.6
Msa0614650 AT5G47620.1 37.179 78 47 1 14 91 7 82 4.35e-13 67.8
Msa0614650 AT5G47620.2 37.179 78 47 1 14 91 7 82 4.35e-13 67.8
Msa0614650 AT5G47620.5 37.179 78 47 1 14 91 7 82 4.35e-13 67.8
Msa0614650 AT1G78260.2 41.892 74 42 1 9 82 13 85 6.01e-13 66.6
Msa0614650 AT1G22330.1 39.189 74 44 1 9 82 13 85 6.32e-13 66.6
Msa0614650 AT1G20880.2 45.455 66 35 1 14 78 25 90 8.98e-13 66.2
Msa0614650 AT1G20880.3 45.455 66 35 1 14 78 25 90 8.98e-13 66.2
Msa0614650 AT1G20880.1 45.455 66 35 1 14 78 25 90 8.98e-13 66.2
Msa0614650 AT5G55550.2 37.179 78 47 1 14 91 7 82 1.15e-12 66.6
Msa0614650 AT5G55550.3 37.179 78 47 1 14 91 7 82 1.15e-12 66.6
Msa0614650 AT5G55550.6 37.179 78 47 1 14 91 7 82 1.15e-12 66.6
Msa0614650 AT5G55550.11 37.179 78 47 1 14 91 7 82 1.15e-12 66.6
Msa0614650 AT5G55550.5 37.179 78 47 1 14 91 7 82 1.17e-12 66.6
Msa0614650 AT5G55550.4 37.179 78 47 1 14 91 7 82 1.17e-12 66.6
Msa0614650 AT5G55550.9 37.179 78 47 1 14 91 7 82 1.17e-12 66.6
Msa0614650 AT5G55550.7 37.179 78 47 1 14 91 7 82 1.17e-12 66.6
Msa0614650 AT5G55550.1 37.179 78 47 1 14 91 7 82 1.17e-12 66.6
Msa0614650 AT1G58470.2 36.364 88 55 1 14 101 121 207 1.52e-12 66.2
Msa0614650 AT1G58470.1 36.364 88 55 1 14 101 121 207 1.52e-12 66.2
Msa0614650 AT5G40490.1 36.145 83 53 0 14 96 131 213 1.56e-12 66.2
Msa0614650 AT5G50250.1 41.026 78 46 0 13 90 207 284 3.04e-12 64.7
Msa0614650 AT3G54770.1 41.667 72 38 1 9 76 13 84 4.62e-12 63.9
Msa0614650 AT3G20930.2 39.024 82 45 1 14 90 283 364 4.75e-12 64.7
Msa0614650 AT3G54770.3 41.667 72 38 1 9 76 13 84 4.85e-12 63.9
Msa0614650 AT5G40490.2 37.931 87 46 2 14 96 114 196 7.47e-12 64.3
Msa0614650 AT5G47620.4 40.000 65 39 0 14 78 7 71 1.04e-11 63.9
Msa0614650 AT5G53720.1 41.026 78 45 1 12 89 8 84 1.09e-11 59.7
Msa0614650 AT5G54580.1 40.449 89 47 2 10 95 53 138 1.15e-11 61.2
Msa0614650 AT4G03110.1 41.096 73 43 0 15 87 351 423 2.62e-11 62.8
Msa0614650 AT3G46020.1 34.524 84 55 0 7 90 1 84 3.19e-11 58.5
Msa0614650 AT5G55550.8 38.028 71 42 1 14 84 7 75 5.04e-11 62.0
Msa0614650 AT5G55550.10 38.028 71 42 1 14 84 7 75 5.29e-11 62.0
Msa0614650 AT2G33410.1 34.177 79 51 1 14 92 111 188 7.19e-11 61.2
Msa0614650 AT2G33410.1 32.927 82 53 1 9 90 2 81 8.77e-11 61.2

Find 129 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATTTGGCTATCCTGTTTC+TGG 0.103545 4_2:+63739918 Msa0614650:three_prime_UTR
TTGGCTAAATGTGGTCATTT+TGG 0.169476 4_2:+63740065 Msa0614650:three_prime_UTR
CTATCCTGTTTCTGGATCTT+TGG 0.177002 4_2:+63739926 Msa0614650:three_prime_UTR
TTCGTTCACAATGTTCTTCT+TGG 0.185957 4_2:+63739478 Msa0614650:three_prime_UTR
TATGCGTTATTGTTCTATTT+GGG 0.210106 4_2:+63740309 Msa0614650:three_prime_UTR
TTATGCGTTATTGTTCTATT+TGG 0.210748 4_2:+63740308 Msa0614650:three_prime_UTR
TCTGGACGCTCTCGTGGTTT+TGG 0.216628 4_2:+63738791 Msa0614650:CDS
CATCACATGCGGCAGTTAAA+AGG 0.266799 4_2:-63740352 None:intergenic
GGTGGTAGTCGTGGAGATTC+TGG 0.273094 4_2:+63739199 Msa0614650:CDS
AGGGATACATTTGAAAAGTT+TGG 0.280841 4_2:+63738437 Msa0614650:CDS
TATCCTGTTTCTGGATCTTT+GGG 0.299460 4_2:+63739927 Msa0614650:three_prime_UTR
ACATGTCCAGTTAGCAATAA+AGG 0.301676 4_2:-63740103 Msa0614660:intron
GTTCTTCTGGCGGTCGCAGC+AGG 0.318323 4_2:+63739173 Msa0614650:CDS
GTTCTTCTTGGATTGTTGTT+TGG 0.332366 4_2:+63739490 Msa0614650:three_prime_UTR
GATTCTATTTAAAGAGGAAT+TGG 0.336167 4_2:+63739784 Msa0614650:three_prime_UTR
AGTGGTGGTGGTGGTCACTA+TGG 0.339869 4_2:+63739130 Msa0614650:CDS
TTAAAAGTATAATGCCGATT+TGG 0.340839 4_2:+63739903 Msa0614650:three_prime_UTR
ACGTTCCTATGCTGGTCTTT+TGG 0.352860 4_2:+63739573 Msa0614650:three_prime_UTR
TGGGTCCCTTTATTGCTAAC+TGG 0.353192 4_2:+63740097 Msa0614650:three_prime_UTR
TTTGCAGCTTTGAAATCAAA+TGG 0.363420 4_2:+63739428 Msa0614650:intron
AGAAATGGAGATCGTTCTTC+TGG 0.378108 4_2:+63739160 Msa0614650:CDS
AAGAAGCAAAACTCTACATT+TGG 0.380905 4_2:-63739860 Msa0614660:CDS
GAACGATCTCCATTTCTATC+TGG 0.388438 4_2:-63739154 None:intergenic
AGGGAGTGCCCTAGTGGTGA+AGG 0.394081 4_2:+63739055 Msa0614650:CDS
CCATATGAACGACGTGGATC+TGG 0.395444 4_2:+63739259 Msa0614650:CDS
TATGATTCTGGCACATTATG+TGG 0.404121 4_2:+63740248 Msa0614650:three_prime_UTR
GTGGAAGAGAATGGAAGTTT+AGG 0.404584 4_2:-63740435 None:intergenic
TTCTTGGATTGTTGTTTGGA+TGG 0.418357 4_2:+63739494 Msa0614650:three_prime_UTR
CACATTTCTATGTGCTGTGC+TGG 0.423828 4_2:+63740710 Msa0614650:three_prime_UTR
CAACATCCGATAGAAAGTTA+AGG 0.426777 4_2:+63738417 Msa0614650:CDS
ACTAATTAACGTTCCTATGC+TGG 0.434677 4_2:+63739565 Msa0614650:three_prime_UTR
GTGGTTGTTGACAAATTCTC+TGG 0.436058 4_2:+63738773 Msa0614650:CDS
CAAGGATCCTCTAGAGATGA+TGG 0.438362 4_2:+63738920 Msa0614650:CDS
TACCTTGATTCTATTTAAAG+AGG 0.439783 4_2:+63739778 Msa0614650:three_prime_UTR
GAAAGTAGATATGGTGGAAG+TGG 0.439807 4_2:+63739112 Msa0614650:CDS
TATCAAAACACTAGTATCAT+TGG 0.440320 4_2:-63739518 None:intergenic
CCAGATCCACGTCGTTCATA+TGG 0.442836 4_2:-63739259 None:intergenic
TTCGCACTATTTGTCTATCA+TGG 0.443041 4_2:+63740510 Msa0614650:three_prime_UTR
CATGTCCAGTTAGCAATAAA+GGG 0.444130 4_2:-63740102 Msa0614660:intron
TTTCCCAAAGATCCAGAAAC+AGG 0.446640 4_2:-63739930 Msa0614660:intron
CAGAAACAGGATAGCCAAAT+CGG 0.447584 4_2:-63739917 Msa0614660:CDS
ATGGTTGAGTTCACTAGCAT+TGG 0.449938 4_2:+63740461 Msa0614650:three_prime_UTR
CTACATTTGGACCTCCATCT+TGG 0.453690 4_2:-63739847 Msa0614660:CDS
CACTATGGTCCAGATAGAAA+TGG 0.454742 4_2:+63739145 Msa0614650:CDS
TTCCTCTTTAAATAGAATCA+AGG 0.459266 4_2:-63739780 Msa0614660:CDS
CGAGATTACCGAGGTGGTCG+AGG 0.461040 4_2:+63738983 Msa0614650:CDS
AACGGTAGTCAAACCTGAGC+CGG 0.470968 4_2:+63740410 Msa0614650:three_prime_UTR
GGTGGTAGAGAAAGTAGATA+TGG 0.473535 4_2:+63739103 Msa0614650:CDS
CTCTATCAACAGTAATAGTT+CGG 0.474868 4_2:-63738886 None:intergenic
CAGTTTGTTGTGCTATAAAA+CGG 0.477865 4_2:+63740392 Msa0614650:three_prime_UTR
ATGAATGGGATAGATTTAGA+TGG 0.485420 4_2:+63738863 Msa0614650:CDS
AGATATGGTGGAAGTGGTGG+TGG 0.486452 4_2:+63739118 Msa0614650:CDS
GTTATTGCAGTTTAAAATGT+CGG 0.488369 4_2:+63738352 Msa0614650:CDS
AACATCCGATAGAAAGTTAA+GGG 0.491433 4_2:+63738418 Msa0614650:CDS
TCTGGCGGTCGCAGCAGGGA+TGG 0.500920 4_2:+63739178 Msa0614650:CDS
TTGCAGCTTTGAAATCAAAT+GGG 0.504229 4_2:+63739429 Msa0614650:intron
TCTTCATGGGGAATATATGA+AGG 0.505584 4_2:+63740212 Msa0614650:three_prime_UTR
TATGGTGGAAGTGGTGGTGG+TGG 0.507336 4_2:+63739121 Msa0614650:CDS
GGTAGAGAAAGTAGATATGG+TGG 0.507553 4_2:+63739106 Msa0614650:CDS
AATAGTGCGAATATTTAGTA+AGG 0.509280 4_2:-63740498 None:intergenic
CATGCATGTCGAGTGCTGCT+TGG 0.509513 4_2:+63739695 Msa0614650:three_prime_UTR
AACCATGTCGTGGAAGAGAA+TGG 0.511194 4_2:-63740444 None:intergenic
ATTAAATACCTCGATGAGAA+AGG 0.513257 4_2:-63739302 None:intergenic
AAATTCTCTGGACGCTCTCG+TGG 0.522134 4_2:+63738785 Msa0614650:CDS
TGTGCCAGAATCATAGAAAA+CGG 0.524140 4_2:-63740240 Msa0614660:CDS
GATGCTATTGATGCTATGAA+TGG 0.526053 4_2:+63738848 Msa0614650:CDS
TATCGGATGTTGACCAAGCA+AGG 0.526702 4_2:-63738406 None:intergenic
ATGCGTTATTGTTCTATTTG+GGG 0.526965 4_2:+63740310 Msa0614650:three_prime_UTR
TGTATCCCTTAACTTTCTAT+CGG 0.530467 4_2:-63738423 None:intergenic
ATGCTATCAATAATTGCTGC+TGG 0.532558 4_2:+63739650 Msa0614650:three_prime_UTR
GGAAGTTTAGGACCCGGCTC+AGG 0.533784 4_2:-63740423 None:intergenic
TGCTTCAATTGTGGTAAACC+TGG 0.534286 4_2:+63739022 Msa0614650:CDS
TTCCATTCTCTTCCACGACA+TGG 0.538850 4_2:+63740442 Msa0614650:three_prime_UTR
GGGAGTGCCCTAGTGGTGAA+GGG 0.544084 4_2:+63739056 Msa0614650:CDS
TTCTTCTGGCGGTCGCAGCA+GGG 0.544328 4_2:+63739174 Msa0614650:CDS
CACGATCGCGACCACGCTCT+CGG 0.544700 4_2:-63738952 None:intergenic
TGGCAAGCTTACAGAGGCCA+AGG 0.548700 4_2:+63738457 Msa0614650:CDS
ACGGTAGTCAAACCTGAGCC+GGG 0.550013 4_2:+63740411 Msa0614650:three_prime_UTR
TATCGTGATCGTGATCGTGC+TGG 0.552506 4_2:+63739235 Msa0614650:CDS
GCAGGATTCTTGGCTAAATG+TGG 0.559112 4_2:+63740056 Msa0614650:intron
CTTCATGGGGAATATATGAA+GGG 0.560134 4_2:+63740213 Msa0614650:three_prime_UTR
GGCGGTCGCAGCAGGGATGG+TGG 0.563764 4_2:+63739181 Msa0614650:CDS
AAGGATCCTCTAGAGATGAT+GGG 0.564493 4_2:+63738921 Msa0614650:CDS
ACAAACCAAAAGACCAGCAT+AGG 0.565468 4_2:-63739578 None:intergenic
TGCGTTATTGTTCTATTTGG+GGG 0.565803 4_2:+63740311 Msa0614650:three_prime_UTR
AGCAGGGATGGTGGTAGTCG+TGG 0.574692 4_2:+63739190 Msa0614650:CDS
TTTATGCATGTCGAGTTGCA+TGG 0.575230 4_2:+63739738 Msa0614650:three_prime_UTR
AAAATGATCAAATCTAACAT+TGG 0.578255 4_2:-63740619 None:intergenic
CACTCCCTAGCAAAATGACC+AGG 0.578775 4_2:-63739040 None:intergenic
GGTGGTCGAGGATCTAATGA+TGG 0.580077 4_2:+63738995 Msa0614650:CDS
GGAGTGCCCTAGTGGTGAAG+GGG 0.582980 4_2:+63739057 Msa0614650:CDS
AGTAGATATGGTGGAAGTGG+TGG 0.583787 4_2:+63739115 Msa0614650:CDS
GCAGTTTAAAATGTCGGACG+AGG 0.587416 4_2:+63738358 Msa0614650:CDS
ATTTCTATGTGCTGTGCTGG+AGG 0.589038 4_2:+63740713 Msa0614650:three_prime_UTR
CTTTGGGAAAGTAGTCAAGC+GGG 0.590635 4_2:+63739943 Msa0614650:three_prime_UTR
ATGCTATTGATGCTATGAAT+GGG 0.592487 4_2:+63738849 Msa0614650:CDS
CATTAGAACATTGAATTCAA+CGG 0.594184 4_2:-63739618 None:intergenic
TTTGCTAGGGAGTGCCCTAG+TGG 0.594989 4_2:+63739049 Msa0614650:CDS
TTTGTGGCTTTGGATGTTTG+GGG 0.601798 4_2:+63739812 Msa0614650:three_prime_UTR
GAACGACGTGGATCTGGAGG+CGG 0.604365 4_2:+63739265 Msa0614650:CDS
AACGTTAATTAGTCTAACAA+AGG 0.610574 4_2:-63739555 None:intergenic
GGGGATCGCTACCGAGAGCG+TGG 0.612289 4_2:+63738941 Msa0614650:CDS
ATATGATGAAAAGAAAGCAA+TGG 0.616878 4_2:+63738823 Msa0614650:CDS
GAGAATGGAAGTTTAGGACC+CGG 0.619545 4_2:-63740429 None:intergenic
GAGTGCCCTAGTGGTGAAGG+GGG 0.631815 4_2:+63739058 Msa0614650:CDS
AGGATCCTCTAGAGATGATG+GGG 0.634245 4_2:+63738922 Msa0614650:CDS
TTCTTCTCATTGGAAGAACG+AGG 0.636743 4_2:+63739878 Msa0614650:three_prime_UTR
TCTCTAGAGGATCCTTGTTG+AGG 0.640001 4_2:-63738914 None:intergenic
TTCATGGGGAATATATGAAG+GGG 0.640366 4_2:+63740214 Msa0614650:three_prime_UTR
TATGAACGACGTGGATCTGG+AGG 0.640937 4_2:+63739262 Msa0614650:CDS
GATAGAGCTCAGCCTCAACA+AGG 0.641644 4_2:+63738902 Msa0614650:CDS
GCGATCCCCATCATCTCTAG+AGG 0.642537 4_2:-63738927 None:intergenic
CATTAGATCCTCGACCACCT+CGG 0.645981 4_2:-63738991 None:intergenic
AATGGAGATCGTTCTTCTGG+CGG 0.649243 4_2:+63739163 Msa0614650:CDS
ATAACATAAGAATTAGTACA+TGG 0.653266 4_2:-63738334 None:intergenic
AACAAACAAAACATCACATG+CGG 0.657583 4_2:-63740363 None:intergenic
CAGCACAGCACATAGAAATG+TGG 0.659371 4_2:-63740709 None:intergenic
TTGATATACCTTTCTCATCG+AGG 0.661732 4_2:+63739294 Msa0614650:exon
GATGGAGGATGCTTCAATTG+TGG 0.663732 4_2:+63739013 Msa0614650:CDS
AAAGTTTGGCAAGCTTACAG+AGG 0.664669 4_2:+63738451 Msa0614650:CDS
CCCCATGAAGAAAACAAGAG+CGG 0.666738 4_2:-63740200 Msa0614660:intron
TCTTTGGGAAAGTAGTCAAG+CGG 0.667376 4_2:+63739942 Msa0614650:three_prime_UTR
GGTCGAGGATCTAATGATGG+AGG 0.667781 4_2:+63738998 Msa0614650:CDS
TCATGGGGAATATATGAAGG+GGG 0.691942 4_2:+63740215 Msa0614650:three_prime_UTR
TAGTGAACTCAACCATGTCG+TGG 0.697075 4_2:-63740454 None:intergenic
CGTGATCGAGATTACCGAGG+TGG 0.697615 4_2:+63738977 Msa0614650:CDS
ATAGAATCAAGGTAATCCCG+CGG 0.718822 4_2:-63739769 Msa0614660:CDS
GCTGGACCATATGAACGACG+TGG 0.755617 4_2:+63739253 Msa0614650:CDS
GAACGTGATCGAGATTACCG+AGG 0.756337 4_2:+63738974 Msa0614650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTGTATTTTTTATTTTATTT+TGG + chr4_2:63739325-63739344 Msa0614650:intron 10.0%
!!! GTGTATTTTTTATTTTATTT+TGG + chr4_2:63739325-63739344 Msa0614650:intron 10.0%
!! TTACTTGATTTACTAATAAA+AGG - chr4_2:63738634-63738653 None:intergenic 15.0%
!! CAATGTAATATGATAAAAAA+TGG + chr4_2:63738671-63738690 Msa0614650:intron 15.0%
!!! TTTCATTTTATTTTGTGAAA+AGG + chr4_2:63738751-63738770 Msa0614650:intron 15.0%
!! TGAAAAAAATACAATTTGAA+AGG - chr4_2:63740584-63740603 None:intergenic 15.0%
!! TTACTTGATTTACTAATAAA+AGG - chr4_2:63738634-63738653 None:intergenic 15.0%
!! CAATGTAATATGATAAAAAA+TGG + chr4_2:63738671-63738690 Msa0614650:intron 15.0%
!!! TTTCATTTTATTTTGTGAAA+AGG + chr4_2:63738751-63738770 Msa0614650:intron 15.0%
!! TGAAAAAAATACAATTTGAA+AGG - chr4_2:63740584-63740603 None:intergenic 15.0%
!!! CTTTTGTTCATTTTTATTTG+AGG + chr4_2:63738584-63738603 Msa0614650:intron 20.0%
!! TCTGAACATTATATTTGATT+TGG + chr4_2:63738704-63738723 Msa0614650:intron 20.0%
!!! ATTATATTTGATTTGGAGAA+TGG + chr4_2:63738711-63738730 Msa0614650:intron 20.0%
!!! TTTATTTTATTTTGGACGAA+TGG + chr4_2:63739333-63739352 Msa0614650:intron 20.0%
!! AAAATGATCAAATCTAACAT+TGG - chr4_2:63740622-63740641 None:intergenic 20.0%
!!! CTTTTGTTCATTTTTATTTG+AGG + chr4_2:63738584-63738603 Msa0614650:intron 20.0%
!! TCTGAACATTATATTTGATT+TGG + chr4_2:63738704-63738723 Msa0614650:intron 20.0%
!!! ATTATATTTGATTTGGAGAA+TGG + chr4_2:63738711-63738730 Msa0614650:intron 20.0%
!!! TTTATTTTATTTTGGACGAA+TGG + chr4_2:63739333-63739352 Msa0614650:intron 20.0%
!! AAAATGATCAAATCTAACAT+TGG - chr4_2:63740622-63740641 None:intergenic 20.0%
!! GTTATTGCAGTTTAAAATGT+CGG + chr4_2:63738352-63738371 Msa0614650:CDS 25.0%
!!! AAAGATAAAGTTTGTTGTCT+AGG - chr4_2:63738568-63738587 None:intergenic 25.0%
!!! CATTTTATTTTGTGAAAAGG+TGG + chr4_2:63738754-63738773 Msa0614650:intron 25.0%
! ATATGATGAAAAGAAAGCAA+TGG + chr4_2:63738823-63738842 Msa0614650:CDS 25.0%
! TATCAAAACACTAGTATCAT+TGG - chr4_2:63739521-63739540 None:intergenic 25.0%
!! AACGTTAATTAGTCTAACAA+AGG - chr4_2:63739558-63739577 None:intergenic 25.0%
! CATTAGAACATTGAATTCAA+CGG - chr4_2:63739621-63739640 None:intergenic 25.0%
! TACCTTGATTCTATTTAAAG+AGG + chr4_2:63739778-63739797 Msa0614650:three_prime_UTR 25.0%
! TTCCTCTTTAAATAGAATCA+AGG - chr4_2:63739783-63739802 Msa0614660:CDS 25.0%
! GATTCTATTTAAAGAGGAAT+TGG + chr4_2:63739784-63739803 Msa0614650:three_prime_UTR 25.0%
!! TTAAAAGTATAATGCCGATT+TGG + chr4_2:63739903-63739922 Msa0614650:three_prime_UTR 25.0%
!! TATTGATGTTATTGAGCTTT+TGG + chr4_2:63740034-63740053 Msa0614650:intron 25.0%
! ACAATAACGCATAAAAACAA+TGG - chr4_2:63740302-63740321 None:intergenic 25.0%
! TTATGCGTTATTGTTCTATT+TGG + chr4_2:63740308-63740327 Msa0614650:three_prime_UTR 25.0%
! TATGCGTTATTGTTCTATTT+GGG + chr4_2:63740309-63740328 Msa0614650:three_prime_UTR 25.0%
! AATAGTGCGAATATTTAGTA+AGG - chr4_2:63740501-63740520 None:intergenic 25.0%
!! GTTATTGCAGTTTAAAATGT+CGG + chr4_2:63738352-63738371 Msa0614650:CDS 25.0%
!!! AAAGATAAAGTTTGTTGTCT+AGG - chr4_2:63738568-63738587 None:intergenic 25.0%
!!! CATTTTATTTTGTGAAAAGG+TGG + chr4_2:63738754-63738773 Msa0614650:intron 25.0%
! ATATGATGAAAAGAAAGCAA+TGG + chr4_2:63738823-63738842 Msa0614650:CDS 25.0%
! TATCAAAACACTAGTATCAT+TGG - chr4_2:63739521-63739540 None:intergenic 25.0%
!! AACGTTAATTAGTCTAACAA+AGG - chr4_2:63739558-63739577 None:intergenic 25.0%
! CATTAGAACATTGAATTCAA+CGG - chr4_2:63739621-63739640 None:intergenic 25.0%
! TACCTTGATTCTATTTAAAG+AGG + chr4_2:63739778-63739797 Msa0614650:three_prime_UTR 25.0%
! TTCCTCTTTAAATAGAATCA+AGG - chr4_2:63739783-63739802 Msa0614660:CDS 25.0%
! GATTCTATTTAAAGAGGAAT+TGG + chr4_2:63739784-63739803 Msa0614650:three_prime_UTR 25.0%
!! TTAAAAGTATAATGCCGATT+TGG + chr4_2:63739903-63739922 Msa0614650:three_prime_UTR 25.0%
!! TATTGATGTTATTGAGCTTT+TGG + chr4_2:63740034-63740053 Msa0614650:intron 25.0%
! ACAATAACGCATAAAAACAA+TGG - chr4_2:63740302-63740321 None:intergenic 25.0%
! TTATGCGTTATTGTTCTATT+TGG + chr4_2:63740308-63740327 Msa0614650:three_prime_UTR 25.0%
! TATGCGTTATTGTTCTATTT+GGG + chr4_2:63740309-63740328 Msa0614650:three_prime_UTR 25.0%
! AATAGTGCGAATATTTAGTA+AGG - chr4_2:63740501-63740520 None:intergenic 25.0%
AACATCCGATAGAAAGTTAA+GGG + chr4_2:63738418-63738437 Msa0614650:CDS 30.0%
TGTATCCCTTAACTTTCTAT+CGG - chr4_2:63738426-63738445 None:intergenic 30.0%
AGGGATACATTTGAAAAGTT+TGG + chr4_2:63738437-63738456 Msa0614650:CDS 30.0%
! ATTTGAGATATTGATCACCT+TGG - chr4_2:63738477-63738496 None:intergenic 30.0%
TCATGTTTGTACATAGAAGT+TGG + chr4_2:63738518-63738537 Msa0614650:intron 30.0%
ATGCTATTGATGCTATGAAT+GGG + chr4_2:63738849-63738868 Msa0614650:CDS 30.0%
ATGAATGGGATAGATTTAGA+TGG + chr4_2:63738863-63738882 Msa0614650:CDS 30.0%
CTCTATCAACAGTAATAGTT+CGG - chr4_2:63738889-63738908 None:intergenic 30.0%
ATTAAATACCTCGATGAGAA+AGG - chr4_2:63739305-63739324 None:intergenic 30.0%
!! TTTGCAGCTTTGAAATCAAA+TGG + chr4_2:63739428-63739447 Msa0614650:intron 30.0%
!! TTGCAGCTTTGAAATCAAAT+GGG + chr4_2:63739429-63739448 Msa0614650:intron 30.0%
!!! GTGTTTTGATATGCAATACT+TGG + chr4_2:63739530-63739549 Msa0614650:three_prime_UTR 30.0%
AAGAAGCAAAACTCTACATT+TGG - chr4_2:63739863-63739882 Msa0614660:CDS 30.0%
!! GTCATTTTGGATTCATCAAT+GGG + chr4_2:63740078-63740097 Msa0614650:three_prime_UTR 30.0%
ATGCGTTATTGTTCTATTTG+GGG + chr4_2:63740310-63740329 Msa0614650:three_prime_UTR 30.0%
AACAAACAAAACATCACATG+CGG - chr4_2:63740366-63740385 None:intergenic 30.0%
!! CAGTTTGTTGTGCTATAAAA+CGG + chr4_2:63740392-63740411 Msa0614650:three_prime_UTR 30.0%
AACATCCGATAGAAAGTTAA+GGG + chr4_2:63738418-63738437 Msa0614650:CDS 30.0%
TGTATCCCTTAACTTTCTAT+CGG - chr4_2:63738426-63738445 None:intergenic 30.0%
AGGGATACATTTGAAAAGTT+TGG + chr4_2:63738437-63738456 Msa0614650:CDS 30.0%
! ATTTGAGATATTGATCACCT+TGG - chr4_2:63738477-63738496 None:intergenic 30.0%
TCATGTTTGTACATAGAAGT+TGG + chr4_2:63738518-63738537 Msa0614650:intron 30.0%
ATGCTATTGATGCTATGAAT+GGG + chr4_2:63738849-63738868 Msa0614650:CDS 30.0%
ATGAATGGGATAGATTTAGA+TGG + chr4_2:63738863-63738882 Msa0614650:CDS 30.0%
CTCTATCAACAGTAATAGTT+CGG - chr4_2:63738889-63738908 None:intergenic 30.0%
ATTAAATACCTCGATGAGAA+AGG - chr4_2:63739305-63739324 None:intergenic 30.0%
!! TTTGCAGCTTTGAAATCAAA+TGG + chr4_2:63739428-63739447 Msa0614650:intron 30.0%
!! TTGCAGCTTTGAAATCAAAT+GGG + chr4_2:63739429-63739448 Msa0614650:intron 30.0%
!!! GTGTTTTGATATGCAATACT+TGG + chr4_2:63739530-63739549 Msa0614650:three_prime_UTR 30.0%
AAGAAGCAAAACTCTACATT+TGG - chr4_2:63739863-63739882 Msa0614660:CDS 30.0%
!! GTCATTTTGGATTCATCAAT+GGG + chr4_2:63740078-63740097 Msa0614650:three_prime_UTR 30.0%
ATGCGTTATTGTTCTATTTG+GGG + chr4_2:63740310-63740329 Msa0614650:three_prime_UTR 30.0%
AACAAACAAAACATCACATG+CGG - chr4_2:63740366-63740385 None:intergenic 30.0%
!! CAGTTTGTTGTGCTATAAAA+CGG + chr4_2:63740392-63740411 Msa0614650:three_prime_UTR 30.0%
!! GATGAGTATCGTTGTTTTGT+TGG + chr4_2:63738380-63738399 Msa0614650:CDS 35.0%
CAACATCCGATAGAAAGTTA+AGG + chr4_2:63738417-63738436 Msa0614650:CDS 35.0%
GATGCTATTGATGCTATGAA+TGG + chr4_2:63738848-63738867 Msa0614650:CDS 35.0%
!! TAAACCTGGTCATTTTGCTA+GGG + chr4_2:63739036-63739055 Msa0614650:CDS 35.0%
TTGATATACCTTTCTCATCG+AGG + chr4_2:63739294-63739313 Msa0614650:exon 35.0%
TTCGTTCACAATGTTCTTCT+TGG + chr4_2:63739478-63739497 Msa0614650:three_prime_UTR 35.0%
! GTTCTTCTTGGATTGTTGTT+TGG + chr4_2:63739490-63739509 Msa0614650:three_prime_UTR 35.0%
!! TTCTTGGATTGTTGTTTGGA+TGG + chr4_2:63739494-63739513 Msa0614650:three_prime_UTR 35.0%
ACTAATTAACGTTCCTATGC+TGG + chr4_2:63739565-63739584 Msa0614650:three_prime_UTR 35.0%
ATGCTATCAATAATTGCTGC+TGG + chr4_2:63739650-63739669 Msa0614650:three_prime_UTR 35.0%
! AGAGGAATTGGAATGTTTTG+TGG + chr4_2:63739796-63739815 Msa0614650:three_prime_UTR 35.0%
! ATTGGAATGTTTTGTGGCTT+TGG + chr4_2:63739802-63739821 Msa0614650:three_prime_UTR 35.0%
!!! TTTTGTGGCTTTGGATGTTT+GGG + chr4_2:63739811-63739830 Msa0614650:three_prime_UTR 35.0%
!!! GGTTTTTTCATGTACCAAGA+TGG + chr4_2:63739833-63739852 Msa0614650:three_prime_UTR 35.0%
! TTTTTCATGTACCAAGATGG+AGG + chr4_2:63739836-63739855 Msa0614650:three_prime_UTR 35.0%
! AGAGTTTTGCTTCTTCTCAT+TGG + chr4_2:63739868-63739887 Msa0614650:three_prime_UTR 35.0%
!! TATCCTGTTTCTGGATCTTT+GGG + chr4_2:63739927-63739946 Msa0614650:three_prime_UTR 35.0%
! TTGGCTAAATGTGGTCATTT+TGG + chr4_2:63740065-63740084 Msa0614650:three_prime_UTR 35.0%
!! GGTCATTTTGGATTCATCAA+TGG + chr4_2:63740077-63740096 Msa0614650:three_prime_UTR 35.0%
CATGTCCAGTTAGCAATAAA+GGG - chr4_2:63740105-63740124 Msa0614660:intron 35.0%
ACATGTCCAGTTAGCAATAA+AGG - chr4_2:63740106-63740125 Msa0614660:intron 35.0%
! AAAATCTTTTCAGCTGCAAG+AGG + chr4_2:63740149-63740168 Msa0614650:three_prime_UTR 35.0%
TCTTCATGGGGAATATATGA+AGG + chr4_2:63740212-63740231 Msa0614650:three_prime_UTR 35.0%
CTTCATGGGGAATATATGAA+GGG + chr4_2:63740213-63740232 Msa0614650:three_prime_UTR 35.0%
TTCATGGGGAATATATGAAG+GGG + chr4_2:63740214-63740233 Msa0614650:three_prime_UTR 35.0%
TGTGCCAGAATCATAGAAAA+CGG - chr4_2:63740243-63740262 Msa0614660:CDS 35.0%
TATGATTCTGGCACATTATG+TGG + chr4_2:63740248-63740267 Msa0614650:three_prime_UTR 35.0%
TGCGTTATTGTTCTATTTGG+GGG + chr4_2:63740311-63740330 Msa0614650:three_prime_UTR 35.0%
! CGTTTTATAGCACAACAAAC+TGG - chr4_2:63740394-63740413 None:intergenic 35.0%
TTCGCACTATTTGTCTATCA+TGG + chr4_2:63740510-63740529 Msa0614650:three_prime_UTR 35.0%
! AAATTTTCCTGCAAAAGCTC+TGG - chr4_2:63740746-63740765 None:intergenic 35.0%
!! GATGAGTATCGTTGTTTTGT+TGG + chr4_2:63738380-63738399 Msa0614650:CDS 35.0%
CAACATCCGATAGAAAGTTA+AGG + chr4_2:63738417-63738436 Msa0614650:CDS 35.0%
GATGCTATTGATGCTATGAA+TGG + chr4_2:63738848-63738867 Msa0614650:CDS 35.0%
!! TAAACCTGGTCATTTTGCTA+GGG + chr4_2:63739036-63739055 Msa0614650:CDS 35.0%
TTGATATACCTTTCTCATCG+AGG + chr4_2:63739294-63739313 Msa0614650:exon 35.0%
TTCGTTCACAATGTTCTTCT+TGG + chr4_2:63739478-63739497 Msa0614650:three_prime_UTR 35.0%
! GTTCTTCTTGGATTGTTGTT+TGG + chr4_2:63739490-63739509 Msa0614650:three_prime_UTR 35.0%
!! TTCTTGGATTGTTGTTTGGA+TGG + chr4_2:63739494-63739513 Msa0614650:three_prime_UTR 35.0%
ACTAATTAACGTTCCTATGC+TGG + chr4_2:63739565-63739584 Msa0614650:three_prime_UTR 35.0%
ATGCTATCAATAATTGCTGC+TGG + chr4_2:63739650-63739669 Msa0614650:three_prime_UTR 35.0%
! AGAGGAATTGGAATGTTTTG+TGG + chr4_2:63739796-63739815 Msa0614650:three_prime_UTR 35.0%
! ATTGGAATGTTTTGTGGCTT+TGG + chr4_2:63739802-63739821 Msa0614650:three_prime_UTR 35.0%
!!! TTTTGTGGCTTTGGATGTTT+GGG + chr4_2:63739811-63739830 Msa0614650:three_prime_UTR 35.0%
!!! GGTTTTTTCATGTACCAAGA+TGG + chr4_2:63739833-63739852 Msa0614650:three_prime_UTR 35.0%
! TTTTTCATGTACCAAGATGG+AGG + chr4_2:63739836-63739855 Msa0614650:three_prime_UTR 35.0%
! AGAGTTTTGCTTCTTCTCAT+TGG + chr4_2:63739868-63739887 Msa0614650:three_prime_UTR 35.0%
!! TATCCTGTTTCTGGATCTTT+GGG + chr4_2:63739927-63739946 Msa0614650:three_prime_UTR 35.0%
! TTGGCTAAATGTGGTCATTT+TGG + chr4_2:63740065-63740084 Msa0614650:three_prime_UTR 35.0%
!! GGTCATTTTGGATTCATCAA+TGG + chr4_2:63740077-63740096 Msa0614650:three_prime_UTR 35.0%
CATGTCCAGTTAGCAATAAA+GGG - chr4_2:63740105-63740124 Msa0614660:intron 35.0%
ACATGTCCAGTTAGCAATAA+AGG - chr4_2:63740106-63740125 Msa0614660:intron 35.0%
! AAAATCTTTTCAGCTGCAAG+AGG + chr4_2:63740149-63740168 Msa0614650:three_prime_UTR 35.0%
TCTTCATGGGGAATATATGA+AGG + chr4_2:63740212-63740231 Msa0614650:three_prime_UTR 35.0%
CTTCATGGGGAATATATGAA+GGG + chr4_2:63740213-63740232 Msa0614650:three_prime_UTR 35.0%
TTCATGGGGAATATATGAAG+GGG + chr4_2:63740214-63740233 Msa0614650:three_prime_UTR 35.0%
TGTGCCAGAATCATAGAAAA+CGG - chr4_2:63740243-63740262 Msa0614660:CDS 35.0%
TATGATTCTGGCACATTATG+TGG + chr4_2:63740248-63740267 Msa0614650:three_prime_UTR 35.0%
TGCGTTATTGTTCTATTTGG+GGG + chr4_2:63740311-63740330 Msa0614650:three_prime_UTR 35.0%
! CGTTTTATAGCACAACAAAC+TGG - chr4_2:63740394-63740413 None:intergenic 35.0%
TTCGCACTATTTGTCTATCA+TGG + chr4_2:63740510-63740529 Msa0614650:three_prime_UTR 35.0%
! AAATTTTCCTGCAAAAGCTC+TGG - chr4_2:63740746-63740765 None:intergenic 35.0%
!! GAGTATCGTTGTTTTGTTGG+TGG + chr4_2:63738383-63738402 Msa0614650:CDS 40.0%
AAAGTTTGGCAAGCTTACAG+AGG + chr4_2:63738451-63738470 Msa0614650:CDS 40.0%
GTGGTTGTTGACAAATTCTC+TGG + chr4_2:63738773-63738792 Msa0614650:CDS 40.0%
! AAGGATCCTCTAGAGATGAT+GGG + chr4_2:63738921-63738940 Msa0614650:CDS 40.0%
TGCTTCAATTGTGGTAAACC+TGG + chr4_2:63739022-63739041 Msa0614650:CDS 40.0%
!! GTAAACCTGGTCATTTTGCT+AGG + chr4_2:63739035-63739054 Msa0614650:CDS 40.0%
GGTGGTAGAGAAAGTAGATA+TGG + chr4_2:63739103-63739122 Msa0614650:CDS 40.0%
GGTAGAGAAAGTAGATATGG+TGG + chr4_2:63739106-63739125 Msa0614650:CDS 40.0%
! GAAAGTAGATATGGTGGAAG+TGG + chr4_2:63739112-63739131 Msa0614650:CDS 40.0%
CACTATGGTCCAGATAGAAA+TGG + chr4_2:63739145-63739164 Msa0614650:CDS 40.0%
GAACGATCTCCATTTCTATC+TGG - chr4_2:63739157-63739176 None:intergenic 40.0%
AGAAATGGAGATCGTTCTTC+TGG + chr4_2:63739160-63739179 Msa0614650:CDS 40.0%
ACAAACCAAAAGACCAGCAT+AGG - chr4_2:63739581-63739600 None:intergenic 40.0%
! TTTATGCATGTCGAGTTGCA+TGG + chr4_2:63739738-63739757 Msa0614650:three_prime_UTR 40.0%
ATAGAATCAAGGTAATCCCG+CGG - chr4_2:63739772-63739791 Msa0614660:CDS 40.0%
!!! GTTTTGTGGCTTTGGATGTT+TGG + chr4_2:63739810-63739829 Msa0614650:three_prime_UTR 40.0%
!! TTTGTGGCTTTGGATGTTTG+GGG + chr4_2:63739812-63739831 Msa0614650:three_prime_UTR 40.0%
TTCTTCTCATTGGAAGAACG+AGG + chr4_2:63739878-63739897 Msa0614650:three_prime_UTR 40.0%
CAGAAACAGGATAGCCAAAT+CGG - chr4_2:63739920-63739939 Msa0614660:CDS 40.0%
!! CTATCCTGTTTCTGGATCTT+TGG + chr4_2:63739926-63739945 Msa0614650:three_prime_UTR 40.0%
TTTCCCAAAGATCCAGAAAC+AGG - chr4_2:63739933-63739952 Msa0614660:intron 40.0%
! TCTTTGGGAAAGTAGTCAAG+CGG + chr4_2:63739942-63739961 Msa0614650:three_prime_UTR 40.0%
ACTTCACCATCACTAGAGTT+AGG + chr4_2:63739996-63740015 Msa0614650:intron 40.0%
CTGAAACCTAACTCTAGTGA+TGG - chr4_2:63740005-63740024 Msa0614660:intron 40.0%
! GATGTTATTGAGCTTTTGGC+AGG + chr4_2:63740038-63740057 Msa0614650:intron 40.0%
!!! TACCGCTCTTGTTTTCTTCA+TGG + chr4_2:63740198-63740217 Msa0614650:three_prime_UTR 40.0%
!!! ACCGCTCTTGTTTTCTTCAT+GGG + chr4_2:63740199-63740218 Msa0614650:three_prime_UTR 40.0%
TCATGGGGAATATATGAAGG+GGG + chr4_2:63740215-63740234 Msa0614650:three_prime_UTR 40.0%
! GGTTCCGTTTTCTATGATTC+TGG + chr4_2:63740236-63740255 Msa0614650:three_prime_UTR 40.0%
GTGGAAGAGAATGGAAGTTT+AGG - chr4_2:63740438-63740457 None:intergenic 40.0%
ATGGTTGAGTTCACTAGCAT+TGG + chr4_2:63740461-63740480 Msa0614650:three_prime_UTR 40.0%
!! GAGTATCGTTGTTTTGTTGG+TGG + chr4_2:63738383-63738402 Msa0614650:CDS 40.0%
AAAGTTTGGCAAGCTTACAG+AGG + chr4_2:63738451-63738470 Msa0614650:CDS 40.0%
GTGGTTGTTGACAAATTCTC+TGG + chr4_2:63738773-63738792 Msa0614650:CDS 40.0%
! AAGGATCCTCTAGAGATGAT+GGG + chr4_2:63738921-63738940 Msa0614650:CDS 40.0%
TGCTTCAATTGTGGTAAACC+TGG + chr4_2:63739022-63739041 Msa0614650:CDS 40.0%
!! GTAAACCTGGTCATTTTGCT+AGG + chr4_2:63739035-63739054 Msa0614650:CDS 40.0%
GGTGGTAGAGAAAGTAGATA+TGG + chr4_2:63739103-63739122 Msa0614650:CDS 40.0%
GGTAGAGAAAGTAGATATGG+TGG + chr4_2:63739106-63739125 Msa0614650:CDS 40.0%
! GAAAGTAGATATGGTGGAAG+TGG + chr4_2:63739112-63739131 Msa0614650:CDS 40.0%
CACTATGGTCCAGATAGAAA+TGG + chr4_2:63739145-63739164 Msa0614650:CDS 40.0%
GAACGATCTCCATTTCTATC+TGG - chr4_2:63739157-63739176 None:intergenic 40.0%
AGAAATGGAGATCGTTCTTC+TGG + chr4_2:63739160-63739179 Msa0614650:CDS 40.0%
ACAAACCAAAAGACCAGCAT+AGG - chr4_2:63739581-63739600 None:intergenic 40.0%
! TTTATGCATGTCGAGTTGCA+TGG + chr4_2:63739738-63739757 Msa0614650:three_prime_UTR 40.0%
ATAGAATCAAGGTAATCCCG+CGG - chr4_2:63739772-63739791 Msa0614660:CDS 40.0%
!!! GTTTTGTGGCTTTGGATGTT+TGG + chr4_2:63739810-63739829 Msa0614650:three_prime_UTR 40.0%
!! TTTGTGGCTTTGGATGTTTG+GGG + chr4_2:63739812-63739831 Msa0614650:three_prime_UTR 40.0%
TTCTTCTCATTGGAAGAACG+AGG + chr4_2:63739878-63739897 Msa0614650:three_prime_UTR 40.0%
CAGAAACAGGATAGCCAAAT+CGG - chr4_2:63739920-63739939 Msa0614660:CDS 40.0%
!! CTATCCTGTTTCTGGATCTT+TGG + chr4_2:63739926-63739945 Msa0614650:three_prime_UTR 40.0%
TTTCCCAAAGATCCAGAAAC+AGG - chr4_2:63739933-63739952 Msa0614660:intron 40.0%
! TCTTTGGGAAAGTAGTCAAG+CGG + chr4_2:63739942-63739961 Msa0614650:three_prime_UTR 40.0%
ACTTCACCATCACTAGAGTT+AGG + chr4_2:63739996-63740015 Msa0614650:intron 40.0%
CTGAAACCTAACTCTAGTGA+TGG - chr4_2:63740005-63740024 Msa0614660:intron 40.0%
! GATGTTATTGAGCTTTTGGC+AGG + chr4_2:63740038-63740057 Msa0614650:intron 40.0%
!!! TACCGCTCTTGTTTTCTTCA+TGG + chr4_2:63740198-63740217 Msa0614650:three_prime_UTR 40.0%
!!! ACCGCTCTTGTTTTCTTCAT+GGG + chr4_2:63740199-63740218 Msa0614650:three_prime_UTR 40.0%
TCATGGGGAATATATGAAGG+GGG + chr4_2:63740215-63740234 Msa0614650:three_prime_UTR 40.0%
! GGTTCCGTTTTCTATGATTC+TGG + chr4_2:63740236-63740255 Msa0614650:three_prime_UTR 40.0%
GTGGAAGAGAATGGAAGTTT+AGG - chr4_2:63740438-63740457 None:intergenic 40.0%
ATGGTTGAGTTCACTAGCAT+TGG + chr4_2:63740461-63740480 Msa0614650:three_prime_UTR 40.0%
! GCAGTTTAAAATGTCGGACG+AGG + chr4_2:63738358-63738377 Msa0614650:CDS 45.0%
TATCGGATGTTGACCAAGCA+AGG - chr4_2:63738409-63738428 None:intergenic 45.0%
! TCTCTAGAGGATCCTTGTTG+AGG - chr4_2:63738917-63738936 None:intergenic 45.0%
! CAAGGATCCTCTAGAGATGA+TGG + chr4_2:63738920-63738939 Msa0614650:CDS 45.0%
! AGGATCCTCTAGAGATGATG+GGG + chr4_2:63738922-63738941 Msa0614650:CDS 45.0%
GATGGAGGATGCTTCAATTG+TGG + chr4_2:63739013-63739032 Msa0614650:CDS 45.0%
! AGTAGATATGGTGGAAGTGG+TGG + chr4_2:63739115-63739134 Msa0614650:CDS 45.0%
AATGGAGATCGTTCTTCTGG+CGG + chr4_2:63739163-63739182 Msa0614650:CDS 45.0%
!!! ACGTTCCTATGCTGGTCTTT+TGG + chr4_2:63739573-63739592 Msa0614650:three_prime_UTR 45.0%
! GTTGCATGGCATATTTTCCG+CGG + chr4_2:63739752-63739771 Msa0614650:three_prime_UTR 45.0%
! TTGCATGGCATATTTTCCGC+GGG + chr4_2:63739753-63739772 Msa0614650:three_prime_UTR 45.0%
CTACATTTGGACCTCCATCT+TGG - chr4_2:63739850-63739869 Msa0614660:CDS 45.0%
! CGATTTGGCTATCCTGTTTC+TGG + chr4_2:63739918-63739937 Msa0614650:three_prime_UTR 45.0%
! CTTTGGGAAAGTAGTCAAGC+GGG + chr4_2:63739943-63739962 Msa0614650:three_prime_UTR 45.0%
! TGAGCTTTTGGCAGGATTCT+TGG + chr4_2:63740046-63740065 Msa0614650:intron 45.0%
GCAGGATTCTTGGCTAAATG+TGG + chr4_2:63740056-63740075 Msa0614650:intron 45.0%
TGGGTCCCTTTATTGCTAAC+TGG + chr4_2:63740097-63740116 Msa0614650:three_prime_UTR 45.0%
CCCCATGAAGAAAACAAGAG+CGG - chr4_2:63740203-63740222 Msa0614660:CDS 45.0%
!!! CCGCTCTTGTTTTCTTCATG+GGG + chr4_2:63740200-63740219 Msa0614650:three_prime_UTR 45.0%
CATCACATGCGGCAGTTAAA+AGG - chr4_2:63740355-63740374 None:intergenic 45.0%
! GAGAATGGAAGTTTAGGACC+CGG - chr4_2:63740432-63740451 None:intergenic 45.0%
TTCCATTCTCTTCCACGACA+TGG + chr4_2:63740442-63740461 Msa0614650:three_prime_UTR 45.0%
AACCATGTCGTGGAAGAGAA+TGG - chr4_2:63740447-63740466 None:intergenic 45.0%
TAGTGAACTCAACCATGTCG+TGG - chr4_2:63740457-63740476 None:intergenic 45.0%
CAGCACAGCACATAGAAATG+TGG - chr4_2:63740712-63740731 None:intergenic 45.0%
CACATTTCTATGTGCTGTGC+TGG + chr4_2:63740710-63740729 Msa0614650:three_prime_UTR 45.0%
ATTTCTATGTGCTGTGCTGG+AGG + chr4_2:63740713-63740732 Msa0614650:three_prime_UTR 45.0%
! GCAGTTTAAAATGTCGGACG+AGG + chr4_2:63738358-63738377 Msa0614650:CDS 45.0%
TATCGGATGTTGACCAAGCA+AGG - chr4_2:63738409-63738428 None:intergenic 45.0%
! TCTCTAGAGGATCCTTGTTG+AGG - chr4_2:63738917-63738936 None:intergenic 45.0%
! CAAGGATCCTCTAGAGATGA+TGG + chr4_2:63738920-63738939 Msa0614650:CDS 45.0%
! AGGATCCTCTAGAGATGATG+GGG + chr4_2:63738922-63738941 Msa0614650:CDS 45.0%
GATGGAGGATGCTTCAATTG+TGG + chr4_2:63739013-63739032 Msa0614650:CDS 45.0%
! AGTAGATATGGTGGAAGTGG+TGG + chr4_2:63739115-63739134 Msa0614650:CDS 45.0%
AATGGAGATCGTTCTTCTGG+CGG + chr4_2:63739163-63739182 Msa0614650:CDS 45.0%
!!! ACGTTCCTATGCTGGTCTTT+TGG + chr4_2:63739573-63739592 Msa0614650:three_prime_UTR 45.0%
! GTTGCATGGCATATTTTCCG+CGG + chr4_2:63739752-63739771 Msa0614650:three_prime_UTR 45.0%
! TTGCATGGCATATTTTCCGC+GGG + chr4_2:63739753-63739772 Msa0614650:three_prime_UTR 45.0%
CTACATTTGGACCTCCATCT+TGG - chr4_2:63739850-63739869 Msa0614660:CDS 45.0%
! CGATTTGGCTATCCTGTTTC+TGG + chr4_2:63739918-63739937 Msa0614650:three_prime_UTR 45.0%
! CTTTGGGAAAGTAGTCAAGC+GGG + chr4_2:63739943-63739962 Msa0614650:three_prime_UTR 45.0%
! TGAGCTTTTGGCAGGATTCT+TGG + chr4_2:63740046-63740065 Msa0614650:intron 45.0%
GCAGGATTCTTGGCTAAATG+TGG + chr4_2:63740056-63740075 Msa0614650:intron 45.0%
TGGGTCCCTTTATTGCTAAC+TGG + chr4_2:63740097-63740116 Msa0614650:three_prime_UTR 45.0%
CCCCATGAAGAAAACAAGAG+CGG - chr4_2:63740203-63740222 Msa0614660:CDS 45.0%
!!! CCGCTCTTGTTTTCTTCATG+GGG + chr4_2:63740200-63740219 Msa0614650:three_prime_UTR 45.0%
CATCACATGCGGCAGTTAAA+AGG - chr4_2:63740355-63740374 None:intergenic 45.0%
! GAGAATGGAAGTTTAGGACC+CGG - chr4_2:63740432-63740451 None:intergenic 45.0%
TTCCATTCTCTTCCACGACA+TGG + chr4_2:63740442-63740461 Msa0614650:three_prime_UTR 45.0%
AACCATGTCGTGGAAGAGAA+TGG - chr4_2:63740447-63740466 None:intergenic 45.0%
TAGTGAACTCAACCATGTCG+TGG - chr4_2:63740457-63740476 None:intergenic 45.0%
CAGCACAGCACATAGAAATG+TGG - chr4_2:63740712-63740731 None:intergenic 45.0%
CACATTTCTATGTGCTGTGC+TGG + chr4_2:63740710-63740729 Msa0614650:three_prime_UTR 45.0%
ATTTCTATGTGCTGTGCTGG+AGG + chr4_2:63740713-63740732 Msa0614650:three_prime_UTR 45.0%
!!! GTTTTGTTGGTGGCCTTGCT+TGG + chr4_2:63738393-63738412 Msa0614650:CDS 50.0%
AAATTCTCTGGACGCTCTCG+TGG + chr4_2:63738785-63738804 Msa0614650:CDS 50.0%
GATAGAGCTCAGCCTCAACA+AGG + chr4_2:63738902-63738921 Msa0614650:CDS 50.0%
GAACGTGATCGAGATTACCG+AGG + chr4_2:63738974-63738993 Msa0614650:CDS 50.0%
CATTAGATCCTCGACCACCT+CGG - chr4_2:63738994-63739013 None:intergenic 50.0%
GGTGGTCGAGGATCTAATGA+TGG + chr4_2:63738995-63739014 Msa0614650:CDS 50.0%
GGTCGAGGATCTAATGATGG+AGG + chr4_2:63738998-63739017 Msa0614650:CDS 50.0%
CACTCCCTAGCAAAATGACC+AGG - chr4_2:63739043-63739062 None:intergenic 50.0%
! AGATATGGTGGAAGTGGTGG+TGG + chr4_2:63739118-63739137 Msa0614650:CDS 50.0%
TATCGTGATCGTGATCGTGC+TGG + chr4_2:63739235-63739254 Msa0614650:CDS 50.0%
CCAGATCCACGTCGTTCATA+TGG - chr4_2:63739262-63739281 None:intergenic 50.0%
CCATATGAACGACGTGGATC+TGG + chr4_2:63739259-63739278 Msa0614650:CDS 50.0%
TATGAACGACGTGGATCTGG+AGG + chr4_2:63739262-63739281 Msa0614650:CDS 50.0%
AACGGTAGTCAAACCTGAGC+CGG + chr4_2:63740410-63740429 Msa0614650:three_prime_UTR 50.0%
!!! GTTTTGTTGGTGGCCTTGCT+TGG + chr4_2:63738393-63738412 Msa0614650:CDS 50.0%
AAATTCTCTGGACGCTCTCG+TGG + chr4_2:63738785-63738804 Msa0614650:CDS 50.0%
GATAGAGCTCAGCCTCAACA+AGG + chr4_2:63738902-63738921 Msa0614650:CDS 50.0%
GAACGTGATCGAGATTACCG+AGG + chr4_2:63738974-63738993 Msa0614650:CDS 50.0%
CATTAGATCCTCGACCACCT+CGG - chr4_2:63738994-63739013 None:intergenic 50.0%
GGTGGTCGAGGATCTAATGA+TGG + chr4_2:63738995-63739014 Msa0614650:CDS 50.0%
GGTCGAGGATCTAATGATGG+AGG + chr4_2:63738998-63739017 Msa0614650:CDS 50.0%
CACTCCCTAGCAAAATGACC+AGG - chr4_2:63739043-63739062 None:intergenic 50.0%
! AGATATGGTGGAAGTGGTGG+TGG + chr4_2:63739118-63739137 Msa0614650:CDS 50.0%
TATCGTGATCGTGATCGTGC+TGG + chr4_2:63739235-63739254 Msa0614650:CDS 50.0%
CCAGATCCACGTCGTTCATA+TGG - chr4_2:63739262-63739281 None:intergenic 50.0%
CCATATGAACGACGTGGATC+TGG + chr4_2:63739259-63739278 Msa0614650:CDS 50.0%
TATGAACGACGTGGATCTGG+AGG + chr4_2:63739262-63739281 Msa0614650:CDS 50.0%
AACGGTAGTCAAACCTGAGC+CGG + chr4_2:63740410-63740429 Msa0614650:three_prime_UTR 50.0%
TGGCAAGCTTACAGAGGCCA+AGG + chr4_2:63738457-63738476 Msa0614650:CDS 55.0%
! TCTGGACGCTCTCGTGGTTT+TGG + chr4_2:63738791-63738810 Msa0614650:CDS 55.0%
GCGATCCCCATCATCTCTAG+AGG - chr4_2:63738930-63738949 None:intergenic 55.0%
CGTGATCGAGATTACCGAGG+TGG + chr4_2:63738977-63738996 Msa0614650:CDS 55.0%
!! TTTGCTAGGGAGTGCCCTAG+TGG + chr4_2:63739049-63739068 Msa0614650:CDS 55.0%
CTCTTCCCCCTTCACCACTA+GGG - chr4_2:63739066-63739085 None:intergenic 55.0%
CTAGTGGTGAAGGGGGAAGA+GGG + chr4_2:63739065-63739084 Msa0614650:CDS 55.0%
TAGTGGTGAAGGGGGAAGAG+GGG + chr4_2:63739066-63739085 Msa0614650:CDS 55.0%
!! TATGGTGGAAGTGGTGGTGG+TGG + chr4_2:63739121-63739140 Msa0614650:CDS 55.0%
!! AGTGGTGGTGGTGGTCACTA+TGG + chr4_2:63739130-63739149 Msa0614650:CDS 55.0%
GGTGGTAGTCGTGGAGATTC+TGG + chr4_2:63739199-63739218 Msa0614650:CDS 55.0%
GCTGGACCATATGAACGACG+TGG + chr4_2:63739253-63739272 Msa0614650:CDS 55.0%
! CATGCATGTCGAGTGCTGCT+TGG + chr4_2:63739695-63739714 Msa0614650:three_prime_UTR 55.0%
ACGGTAGTCAAACCTGAGCC+GGG + chr4_2:63740411-63740430 Msa0614650:three_prime_UTR 55.0%
! TCGTGTGCCAGAGCTTTTGC+AGG + chr4_2:63740736-63740755 Msa0614650:three_prime_UTR 55.0%
TGGCAAGCTTACAGAGGCCA+AGG + chr4_2:63738457-63738476 Msa0614650:CDS 55.0%
! TCTGGACGCTCTCGTGGTTT+TGG + chr4_2:63738791-63738810 Msa0614650:CDS 55.0%
GCGATCCCCATCATCTCTAG+AGG - chr4_2:63738930-63738949 None:intergenic 55.0%
CGTGATCGAGATTACCGAGG+TGG + chr4_2:63738977-63738996 Msa0614650:CDS 55.0%
!! TTTGCTAGGGAGTGCCCTAG+TGG + chr4_2:63739049-63739068 Msa0614650:CDS 55.0%
CTCTTCCCCCTTCACCACTA+GGG - chr4_2:63739066-63739085 None:intergenic 55.0%
CTAGTGGTGAAGGGGGAAGA+GGG + chr4_2:63739065-63739084 Msa0614650:CDS 55.0%
TAGTGGTGAAGGGGGAAGAG+GGG + chr4_2:63739066-63739085 Msa0614650:CDS 55.0%
!! TATGGTGGAAGTGGTGGTGG+TGG + chr4_2:63739121-63739140 Msa0614650:CDS 55.0%
!! AGTGGTGGTGGTGGTCACTA+TGG + chr4_2:63739130-63739149 Msa0614650:CDS 55.0%
GGTGGTAGTCGTGGAGATTC+TGG + chr4_2:63739199-63739218 Msa0614650:CDS 55.0%
GCTGGACCATATGAACGACG+TGG + chr4_2:63739253-63739272 Msa0614650:CDS 55.0%
! CATGCATGTCGAGTGCTGCT+TGG + chr4_2:63739695-63739714 Msa0614650:three_prime_UTR 55.0%
ACGGTAGTCAAACCTGAGCC+GGG + chr4_2:63740411-63740430 Msa0614650:three_prime_UTR 55.0%
! TCGTGTGCCAGAGCTTTTGC+AGG + chr4_2:63740736-63740755 Msa0614650:three_prime_UTR 55.0%
CGAGATTACCGAGGTGGTCG+AGG + chr4_2:63738983-63739002 Msa0614650:CDS 60.0%
!! AGGGAGTGCCCTAGTGGTGA+AGG + chr4_2:63739055-63739074 Msa0614650:CDS 60.0%
!! GGGAGTGCCCTAGTGGTGAA+GGG + chr4_2:63739056-63739075 Msa0614650:CDS 60.0%
! GGAGTGCCCTAGTGGTGAAG+GGG + chr4_2:63739057-63739076 Msa0614650:CDS 60.0%
GAGTGCCCTAGTGGTGAAGG+GGG + chr4_2:63739058-63739077 Msa0614650:CDS 60.0%
CCTCTTCCCCCTTCACCACT+AGG - chr4_2:63739067-63739086 None:intergenic 60.0%
CCTAGTGGTGAAGGGGGAAG+AGG + chr4_2:63739064-63739083 Msa0614650:CDS 60.0%
AGTGGTGAAGGGGGAAGAGG+GGG + chr4_2:63739067-63739086 Msa0614650:CDS 60.0%
TTCTTCTGGCGGTCGCAGCA+GGG + chr4_2:63739174-63739193 Msa0614650:CDS 60.0%
! AGCAGGGATGGTGGTAGTCG+TGG + chr4_2:63739190-63739209 Msa0614650:CDS 60.0%
GAACGACGTGGATCTGGAGG+CGG + chr4_2:63739265-63739284 Msa0614650:CDS 60.0%
! GGAAGTTTAGGACCCGGCTC+AGG - chr4_2:63740426-63740445 None:intergenic 60.0%
CGAGATTACCGAGGTGGTCG+AGG + chr4_2:63738983-63739002 Msa0614650:CDS 60.0%
!! AGGGAGTGCCCTAGTGGTGA+AGG + chr4_2:63739055-63739074 Msa0614650:CDS 60.0%
!! GGGAGTGCCCTAGTGGTGAA+GGG + chr4_2:63739056-63739075 Msa0614650:CDS 60.0%
! GGAGTGCCCTAGTGGTGAAG+GGG + chr4_2:63739057-63739076 Msa0614650:CDS 60.0%
GAGTGCCCTAGTGGTGAAGG+GGG + chr4_2:63739058-63739077 Msa0614650:CDS 60.0%
CCTCTTCCCCCTTCACCACT+AGG - chr4_2:63739067-63739086 None:intergenic 60.0%
CCTAGTGGTGAAGGGGGAAG+AGG + chr4_2:63739064-63739083 Msa0614650:CDS 60.0%
AGTGGTGAAGGGGGAAGAGG+GGG + chr4_2:63739067-63739086 Msa0614650:CDS 60.0%
TTCTTCTGGCGGTCGCAGCA+GGG + chr4_2:63739174-63739193 Msa0614650:CDS 60.0%
! AGCAGGGATGGTGGTAGTCG+TGG + chr4_2:63739190-63739209 Msa0614650:CDS 60.0%
GAACGACGTGGATCTGGAGG+CGG + chr4_2:63739265-63739284 Msa0614650:CDS 60.0%
! GGAAGTTTAGGACCCGGCTC+AGG - chr4_2:63740426-63740445 None:intergenic 60.0%
CACGATCGCGACCACGCTCT+CGG - chr4_2:63738955-63738974 None:intergenic 65.0%
GTGAAGGGGGAAGAGGGGGA+GGG + chr4_2:63739071-63739090 Msa0614650:CDS 65.0%
TGAAGGGGGAAGAGGGGGAG+GGG + chr4_2:63739072-63739091 Msa0614650:CDS 65.0%
AGAGGGGGAGGGGGAAGGTA+TGG + chr4_2:63739082-63739101 Msa0614650:CDS 65.0%
GTTCTTCTGGCGGTCGCAGC+AGG + chr4_2:63739173-63739192 Msa0614650:CDS 65.0%
CACGATCGCGACCACGCTCT+CGG - chr4_2:63738955-63738974 None:intergenic 65.0%
GTGAAGGGGGAAGAGGGGGA+GGG + chr4_2:63739071-63739090 Msa0614650:CDS 65.0%
TGAAGGGGGAAGAGGGGGAG+GGG + chr4_2:63739072-63739091 Msa0614650:CDS 65.0%
AGAGGGGGAGGGGGAAGGTA+TGG + chr4_2:63739082-63739101 Msa0614650:CDS 65.0%
GTTCTTCTGGCGGTCGCAGC+AGG + chr4_2:63739173-63739192 Msa0614650:CDS 65.0%
GGGGATCGCTACCGAGAGCG+TGG + chr4_2:63738941-63738960 Msa0614650:CDS 70.0%
GGTGAAGGGGGAAGAGGGGG+AGG + chr4_2:63739070-63739089 Msa0614650:CDS 70.0%
GAAGGGGGAAGAGGGGGAGG+GGG + chr4_2:63739073-63739092 Msa0614650:CDS 70.0%
! GGGGGAGGGGGAAGGTATGG+TGG + chr4_2:63739085-63739104 Msa0614650:CDS 70.0%
TCTGGCGGTCGCAGCAGGGA+TGG + chr4_2:63739178-63739197 Msa0614650:CDS 70.0%
GGGGATCGCTACCGAGAGCG+TGG + chr4_2:63738941-63738960 Msa0614650:CDS 70.0%
GGTGAAGGGGGAAGAGGGGG+AGG + chr4_2:63739070-63739089 Msa0614650:CDS 70.0%
GAAGGGGGAAGAGGGGGAGG+GGG + chr4_2:63739073-63739092 Msa0614650:CDS 70.0%
! GGGGGAGGGGGAAGGTATGG+TGG + chr4_2:63739085-63739104 Msa0614650:CDS 70.0%
TCTGGCGGTCGCAGCAGGGA+TGG + chr4_2:63739178-63739197 Msa0614650:CDS 70.0%
GGGGAAGAGGGGGAGGGGGA+AGG + chr4_2:63739077-63739096 Msa0614650:CDS 75.0%
GGCGGTCGCAGCAGGGATGG+TGG + chr4_2:63739181-63739200 Msa0614650:CDS 75.0%
GGGGAAGAGGGGGAGGGGGA+AGG + chr4_2:63739077-63739096 Msa0614650:CDS 75.0%
GGCGGTCGCAGCAGGGATGG+TGG + chr4_2:63739181-63739200 Msa0614650:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 63738337 63740768 63738337 ID=Msa0614650;Name=Msa0614650
chr4_2 mRNA 63738337 63740768 63738337 ID=Msa0614650-mRNA-1;Parent=Msa0614650;Name=Msa0614650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=13|1|1|1|0.66|0.5|4|1257|217
chr4_2 exon 63738337 63738478 63738337 ID=Msa0614650-mRNA-1:exon:17806;Parent=Msa0614650-mRNA-1
chr4_2 exon 63738773 63739315 63738773 ID=Msa0614650-mRNA-1:exon:17807;Parent=Msa0614650-mRNA-1
chr4_2 exon 63739435 63739964 63739435 ID=Msa0614650-mRNA-1:exon:17808;Parent=Msa0614650-mRNA-1
chr4_2 exon 63740060 63740768 63740060 ID=Msa0614650-mRNA-1:exon:17809;Parent=Msa0614650-mRNA-1
chr4_2 five_prime_UTR 63738337 63738349 63738337 ID=Msa0614650-mRNA-1:five_prime_utr;Parent=Msa0614650-mRNA-1
chr4_2 CDS 63738350 63738478 63738350 ID=Msa0614650-mRNA-1:cds;Parent=Msa0614650-mRNA-1
chr4_2 CDS 63738773 63739297 63738773 ID=Msa0614650-mRNA-1:cds;Parent=Msa0614650-mRNA-1
chr4_2 three_prime_UTR 63739298 63739315 63739298 ID=Msa0614650-mRNA-1:three_prime_utr;Parent=Msa0614650-mRNA-1
chr4_2 three_prime_UTR 63739435 63739964 63739435 ID=Msa0614650-mRNA-1:three_prime_utr;Parent=Msa0614650-mRNA-1
chr4_2 three_prime_UTR 63740060 63740768 63740060 ID=Msa0614650-mRNA-1:three_prime_utr;Parent=Msa0614650-mRNA-1
Gene Sequence

>Msa0614650

ATGTTATTGCAGTTTAAAATGTCGGACGAGGATGAGTATCGTTGTTTTGTTGGTGGCCTTGCTTGGTCAACATCCGATAGAAAGTTAAGGGATACATTTGAAAAGTTTGGCAAGCTTACAGAGGCCAAGGTGGTTGTTGACAAATTCTCTGGACGCTCTCGTGGTTTTGGATTTGTCACATATGATGAAAAGAAAGCAATGGAAGATGCTATTGATGCTATGAATGGGATAGATTTAGATGGCCGAACTATTACTGTTGATAGAGCTCAGCCTCAACAAGGATCCTCTAGAGATGATGGGGATCGCTACCGAGAGCGTGGTCGCGATCGTGAACGTGATCGAGATTACCGAGGTGGTCGAGGATCTAATGATGGAGGATGCTTCAATTGTGGTAAACCTGGTCATTTTGCTAGGGAGTGCCCTAGTGGTGAAGGGGGAAGAGGGGGAGGGGGAAGGTATGGTGGTAGAGAAAGTAGATATGGTGGAAGTGGTGGTGGTGGTCACTATGGTCCAGATAGAAATGGAGATCGTTCTTCTGGCGGTCGCAGCAGGGATGGTGGTAGTCGTGGAGATTCTGGAAGTGATCGATACTATCGTGATCGTGATCGTGCTGGACCATATGAACGACGTGGATCTGGAGGCGGCTATCGTTGA
Protein sequence

>Msa0614650

MLLQFKMSDEDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKAMEDAIDAMNGIDLDGRTITVDRAQPQQGSSRDDGDRYRERGRDRERDRDYRGGRGSNDGGCFNCGKPGHFARECPSGEGGRGGGGRYGGRESRYGGSGGGGHYGPDRNGDRSSGGRSRDGGSRGDSGSDRYYRDRDRAGPYERRGSGGGYR*