AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214890 MtrunA17_Chr4g0063941 91.899 358 25 1 1 358 1 354 0.0 606
Msa1214890 MtrunA17_Chr4g0063971 91.620 358 13 2 1 358 1 341 0.0 566
Msa1214890 MtrunA17_Chr6g0476191 60.843 166 61 4 1 165 1 163 4.93e-57 183
Msa1214890 MtrunA17_Chr6g0476221 70.400 125 36 1 1 125 1 124 1.29e-55 179
Msa1214890 MtrunA17_Chr6g0476211 64.539 141 46 2 1 138 1 140 6.74e-55 176
Msa1214890 MtrunA17_Chr4g0003291 66.667 84 26 2 37 119 2 84 4.91e-30 118
Msa1214890 MtrunA17_Chr6g0474121 51.899 79 34 1 67 141 1 79 1.33e-17 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214890 AT1G15340.1 59.813 107 40 3 21 126 5 109 9.70e-36 134
Msa1214890 AT3G15790.1 59.821 112 41 3 18 127 2 111 7.92e-35 128
Msa1214890 AT3G15790.3 59.821 112 41 3 18 127 2 111 7.92e-35 128
Msa1214890 AT3G15790.2 59.821 112 41 3 18 127 2 111 7.92e-35 128
Msa1214890 AT1G15340.2 61.538 52 20 0 21 72 5 56 5.45e-18 84.3

Find 118 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCCCATGTCTCATTTATT+TGG 0.130500 8_1:+75779366 Msa1214890:three_prime_UTR
ACAATTCTCGATGATCTTCT+TGG 0.243354 8_1:-75778241 None:intergenic
AGAGTTAATTGTATTCATTC+AGG 0.264815 8_1:-75779069 None:intergenic
ATTAGCCATGATCTTGAATA+TGG 0.312967 8_1:+75779455 Msa1214890:three_prime_UTR
GAAATAAAACATATGCAAAT+AGG 0.321417 8_1:-75779391 None:intergenic
CAATCAAATTCCGATATGTT+TGG 0.322423 8_1:-75778202 None:intergenic
GACTTTCTGCTACGTTTCTT+AGG 0.330344 8_1:-75778310 None:intergenic
TCCATCTGGTTGGACCAAAA+AGG 0.337926 8_1:+75775936 Msa1214890:CDS
GTTAGAATTATTATTATCAT+TGG 0.339451 8_1:-75779431 None:intergenic
CGGAATTTGATTGGGGCACT+GGG 0.341266 8_1:+75778212 Msa1214890:CDS
ACGAAACAAGATGGTGGATC+TGG 0.355890 8_1:+75778823 Msa1214890:CDS
CAAACATATCGGAATTTGAT+TGG 0.360294 8_1:+75778203 Msa1214890:CDS
TGCAAAGGACATCACATTAC+AGG 0.361120 8_1:-75779282 None:intergenic
GTCTGGAGTTGTTCAGAATA+AGG 0.361170 8_1:+75778612 Msa1214890:CDS
TCGGAATTTGATTGGGGCAC+TGG 0.370091 8_1:+75778211 Msa1214890:CDS
GGTGCTGTCGGTGCAGCTGC+AGG 0.374683 8_1:+75775877 Msa1214890:CDS
TCCAACGAAACAGGCTCTTC+TGG 0.378309 8_1:-75775904 None:intergenic
TCTTGCTTTGTCTCCTCTGC+TGG 0.384252 8_1:-75778655 None:intergenic
AATCAAATTCCGATATGTTT+GGG 0.391168 8_1:-75778201 None:intergenic
AAACATATCGGAATTTGATT+GGG 0.399027 8_1:+75778204 Msa1214890:CDS
ATGTCTCTTCACAACATAGA+TGG 0.401913 8_1:-75779220 None:intergenic
TCCTGCTTTGTCTCCTCCGC+TGG 0.406584 8_1:-75778733 None:intergenic
AGTAGTTTCTCCAGGTTGAA+TGG 0.415859 8_1:-75778500 None:intergenic
GATCCGTACCAAAAGGCATT+TGG 0.420195 8_1:+75778153 Msa1214890:CDS
TCAGTTGAGAAGGAAGGTTC+TGG 0.420268 8_1:+75775856 Msa1214890:CDS
TCTTGTTTCGTCTCTTCCAC+TGG 0.422030 8_1:-75778811 None:intergenic
TCTTGTCGCGTCTTTCTCCT+TGG 0.423678 8_1:-75778953 None:intergenic
AACAGGATCACCCGTGAGGC+TGG 0.424398 8_1:+75778922 Msa1214890:CDS
ACTTGTTTCGTCTCCTCCAC+TGG 0.425405 8_1:-75778772 None:intergenic
GACAAAGGAGCTGAGGGGTC+TGG 0.432101 8_1:+75778595 Msa1214890:CDS
ATTGTGTTCACTTCACCAAC+AGG 0.434194 8_1:+75778124 Msa1214890:CDS
GCAGGTAGCTCCAACGAAAC+AGG 0.435285 8_1:-75775913 None:intergenic
AAAATAAAGAGGAAGATAAC+AGG 0.438541 8_1:+75778905 Msa1214890:CDS
AATAAGGATGAAGAAAAGAT+TGG 0.442381 8_1:+75778628 Msa1214890:CDS
TTGGAGCTACCTGCTCCATC+TGG 0.447780 8_1:+75775922 Msa1214890:CDS
CGAAACAAGATGGTGGATCT+GGG 0.448304 8_1:+75778824 Msa1214890:CDS
GCAAGAAGCTGGCGAAACTA+AGG 0.450556 8_1:+75778393 Msa1214890:CDS
ACAAAGCAAGAAGAAAAGAT+TGG 0.458501 8_1:+75778667 Msa1214890:CDS
TAACGGTGGCCCAAACATAT+CGG 0.461224 8_1:+75778192 Msa1214890:CDS
CAAATCTCCATCAGCAGTGT+TGG 0.465617 8_1:-75778548 None:intergenic
ACTAAGCAAAACGAAAAGAT+TGG 0.465779 8_1:+75778706 Msa1214890:CDS
TGGTTTCTCCTCCAGCCTCA+CGG 0.470523 8_1:-75778933 None:intergenic
GGTTTCTCCTCCAGCCTCAC+GGG 0.470641 8_1:-75778932 None:intergenic
TGAGACATGGGGCATGAAGT+TGG 0.470955 8_1:-75779357 None:intergenic
TCTTACAACACAATGTTACA+TGG 0.474654 8_1:-75779257 None:intergenic
GAATGAATACAATTAACTCT+TGG 0.478744 8_1:+75779072 Msa1214890:three_prime_UTR
GAATCAGAGGTGACTGTGAA+TGG 0.479774 8_1:+75779021 Msa1214890:CDS
GCAATATAAGTAGTTTCTCC+AGG 0.485009 8_1:-75778508 None:intergenic
CATAGCCATATTCAAGATCA+TGG 0.487798 8_1:-75779460 None:intergenic
TGCTGAGAAAACGGCTGAAG+TGG 0.493970 8_1:+75778876 Msa1214890:CDS
TGGCGAAACTAAGGATGATA+AGG 0.496710 8_1:+75778402 Msa1214890:CDS
ATATTCAAGATCATGGCTAA+TGG 0.498521 8_1:-75779453 None:intergenic
GGGAAATCCAACACTGCTGA+TGG 0.499797 8_1:+75778541 Msa1214890:CDS
GCCAGCGGAGGAGACAAAGC+AGG 0.506408 8_1:+75778732 Msa1214890:CDS
TTATCCTCAGATAGATCTAC+AGG 0.507882 8_1:-75779112 None:intergenic
AGCTACCTGCTCCATCTGGT+TGG 0.512073 8_1:+75775926 Msa1214890:CDS
GAAAAGTATTTGAAAACTAA+CGG 0.517809 8_1:+75778175 Msa1214890:CDS
TACTTATATTGCAAAGGATG+AGG 0.518178 8_1:+75778519 Msa1214890:CDS
GTACGGATCTCCTCTCCTGT+TGG 0.519310 8_1:-75778139 None:intergenic
TGCCCCTACTGCTGAGAAAA+CGG 0.519959 8_1:+75778867 Msa1214890:CDS
TTGGTCCAACCAGATGGAGC+AGG 0.524315 8_1:-75775931 None:intergenic
GACGTGGAAATGCAAGAAGC+TGG 0.536719 8_1:+75778382 Msa1214890:CDS
GGATGATAAGGATGTAGAGC+CGG 0.539111 8_1:+75778414 Msa1214890:CDS
GAGAGGAGATCCGTACCAAA+AGG 0.541915 8_1:+75778146 Msa1214890:CDS
ACTTATATTGCAAAGGATGA+GGG 0.544601 8_1:+75778520 Msa1214890:CDS
TAAGGATGTAGAGCCGGAAA+AGG 0.552217 8_1:+75778420 Msa1214890:CDS
AGAAAAGATCGGACAGCCAG+TGG 0.556644 8_1:+75778795 Msa1214890:CDS
GTTCCAAATAAATGAGACAT+GGG 0.564252 8_1:-75779369 None:intergenic
ACCAGAAGAGCCTGTTTCGT+TGG 0.564563 8_1:+75775903 Msa1214890:CDS
TTTCTGCTACGTTTCTTAGG+AGG 0.568448 8_1:-75778307 None:intergenic
ATCGACGACAAAGGAGCTGA+GGG 0.572360 8_1:+75778589 Msa1214890:CDS
TTCAAAGAAAGAAGCTTCTG+AGG 0.575578 8_1:+75778339 Msa1214890:CDS
AGCTTCTGAGGACGAAGCAG+AGG 0.581963 8_1:+75778351 Msa1214890:CDS
ATCATCGAGAATTGTTGAGA+AGG 0.584060 8_1:+75778249 Msa1214890:CDS
AGAAACTACTTATATTGCAA+AGG 0.585396 8_1:+75778513 Msa1214890:CDS
GTTAAAGAGTCCATTCAACC+TGG 0.588074 8_1:+75778490 Msa1214890:CDS
GGAAAAGATTGAACAGCCAG+TGG 0.588335 8_1:+75778756 Msa1214890:CDS
AACATATCGGAATTTGATTG+GGG 0.594084 8_1:+75778205 Msa1214890:CDS
GCGAGTTCAGTTGAGAAGGA+AGG 0.595479 8_1:+75775850 Msa1214890:CDS
GGATAACACTGCAAAGGACA+TGG 0.597551 8_1:-75779336 None:intergenic
GCAAAGGACATCACATTACA+GGG 0.600764 8_1:-75779281 None:intergenic
GGTTCCAAATAAATGAGACA+TGG 0.603268 8_1:-75779370 None:intergenic
GAGAAAACGGCTGAAGTGGA+AGG 0.605734 8_1:+75778880 Msa1214890:CDS
CTTATATTGCAAAGGATGAG+GGG 0.609242 8_1:+75778521 Msa1214890:CDS
GTGGAAGAGACGAAACAAGA+TGG 0.609428 8_1:+75778814 Msa1214890:CDS
GCACGATGAAGCAAACTACA+TGG 0.609694 8_1:+75778978 Msa1214890:CDS
AAGGAAGGTTCTGGTGCTGT+CGG 0.610581 8_1:+75775865 Msa1214890:CDS
ACGAAACAAGTAGAAAAGAT+CGG 0.611494 8_1:+75778784 Msa1214890:CDS
CGAAAAGATTGGACAGCCAG+CGG 0.613646 8_1:+75778717 Msa1214890:CDS
AGCGGAGGAGACAAAGCAGG+AGG 0.614310 8_1:+75778735 Msa1214890:CDS
CTCTTCACAACATAGATGGA+TGG 0.614927 8_1:-75779216 None:intergenic
AGTGGAAGGCGAAAATAAAG+AGG 0.617317 8_1:+75778894 Msa1214890:CDS
TATGAACAAGGCTGAATCAG+AGG 0.619422 8_1:+75779008 Msa1214890:CDS
AGGATCACCCGTGAGGCTGG+AGG 0.622567 8_1:+75778925 Msa1214890:CDS
TGAAATTGAAGCGACACGTG+TGG 0.626538 8_1:-75775501 None:intergenic
AATGGCGAGTTCAGTTGAGA+AGG 0.627741 8_1:+75775846 Msa1214890:exon
TATCGACGACAAAGGAGCTG+AGG 0.627859 8_1:+75778588 Msa1214890:CDS
CATGGTTCATGATATGAACA+AGG 0.628766 8_1:+75778996 Msa1214890:CDS
AAAGAGAATATCGACGACAA+AGG 0.633629 8_1:+75778580 Msa1214890:CDS
CTTACAACACAATGTTACAT+GGG 0.633740 8_1:-75779256 None:intergenic
GTTCACTTCACCAACAGGAG+AGG 0.638059 8_1:+75778129 Msa1214890:CDS
AGCAGAGGAGACAAAAGACG+TGG 0.647050 8_1:+75778366 Msa1214890:CDS
GAAGTTGGATAACACTGCAA+AGG 0.648039 8_1:-75779342 None:intergenic
AAAGATTGGACTGCCAGCAG+AGG 0.649175 8_1:+75778642 Msa1214890:CDS
GAAACAAGATGGTGGATCTG+GGG 0.649794 8_1:+75778825 Msa1214890:CDS
AAAGATTGAACAGCCAGTGG+AGG 0.649841 8_1:+75778759 Msa1214890:CDS
GAAGAGACGAAACAAGATGG+TGG 0.653012 8_1:+75778817 Msa1214890:CDS
GAGAATTGTTGAGAAGGTCA+AGG 0.659236 8_1:+75778255 Msa1214890:CDS
TGAGGCTGGAGGAGAAACCA+AGG 0.668481 8_1:+75778936 Msa1214890:CDS
AAAGATTGGACAGCCAGCAG+AGG 0.672505 8_1:+75778681 Msa1214890:CDS
GACGCCTGTAGATCTATCTG+AGG 0.675165 8_1:+75779108 Msa1214890:three_prime_UTR
AAAGATTGGACAGCCAGCGG+AGG 0.683425 8_1:+75778720 Msa1214890:CDS
GGAATTTGATTGGGGCACTG+GGG 0.689173 8_1:+75778213 Msa1214890:CDS
GAATGGAAGCTGAATTGTTG+AGG 0.691183 8_1:+75779038 Msa1214890:exon
TTCCAAATAAATGAGACATG+GGG 0.697229 8_1:-75779368 None:intergenic
AAGTATTTGAAAACTAACGG+TGG 0.726069 8_1:+75778178 Msa1214890:CDS
AGATAACAGGATCACCCGTG+AGG 0.732047 8_1:+75778918 Msa1214890:CDS
TCGACGACAAAGGAGCTGAG+GGG 0.744956 8_1:+75778590 Msa1214890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATAAATAATTAAAGAAAA+AGG - chr8_1:75775712-75775731 None:intergenic 10.0%
!!! GTTTTGTAATTTTAAATATT+TGG + chr8_1:75776436-75776455 Msa1214890:intron 10.0%
!! AAAAAAGAAAAAAAAATCAT+TGG - chr8_1:75777191-75777210 None:intergenic 10.0%
!!! AGTATTGTGATATTTTTTTT+TGG + chr8_1:75775802-75775821 Msa1214890:intron 15.0%
!!! GTATTGTGATATTTTTTTTT+GGG + chr8_1:75775803-75775822 Msa1214890:intron 15.0%
!!! TTGTTTGAATTTTCAATTTT+AGG + chr8_1:75775971-75775990 Msa1214890:intron 15.0%
!!! ATTTTAAATATTTGGTGAAA+TGG + chr8_1:75776444-75776463 Msa1214890:intron 15.0%
!!! TTTTAAATATTTGGTGAAAT+GGG + chr8_1:75776445-75776464 Msa1214890:intron 15.0%
!!! TTTTTTTTACAATGATAGAT+GGG + chr8_1:75776702-75776721 Msa1214890:intron 15.0%
!! TTTACTTCAAGTATTAAAAA+AGG - chr8_1:75777127-75777146 None:intergenic 15.0%
!! GTTAGAATTATTATTATCAT+TGG - chr8_1:75779434-75779453 None:intergenic 15.0%
!!! AAAAATTAGAACAACCTTTT+TGG - chr8_1:75775953-75775972 None:intergenic 20.0%
!!! TTTATAACATGCTTTGATTT+TGG + chr8_1:75776075-75776094 Msa1214890:intron 20.0%
!!! TGATTTTGGTTTTCATAATT+AGG + chr8_1:75776089-75776108 Msa1214890:intron 20.0%
!!! GATTTTGGTTTTCATAATTA+GGG + chr8_1:75776090-75776109 Msa1214890:intron 20.0%
!! TAAAATTACAAAACCAAAGT+AGG - chr8_1:75776430-75776449 None:intergenic 20.0%
!! CATCTATCATTGTAAAAAAA+AGG - chr8_1:75776703-75776722 None:intergenic 20.0%
!!! CTTTTTTTTACAATGATAGA+TGG + chr8_1:75776701-75776720 Msa1214890:intron 20.0%
!! AAAAATGTAATAGTTAGACT+TGG - chr8_1:75776792-75776811 None:intergenic 20.0%
!! ATAGTTATTACACATTTACA+TGG - chr8_1:75777023-75777042 None:intergenic 20.0%
!! GTCAGGAAATATTATAATAA+TGG - chr8_1:75777072-75777091 None:intergenic 20.0%
!! ATTGTATAATACATAACTAG+AGG + chr8_1:75777316-75777335 Msa1214890:intron 20.0%
!! TTGTATAATACATAACTAGA+GGG + chr8_1:75777317-75777336 Msa1214890:intron 20.0%
!!! AATTTTTTGATTAAGAGAAG+AGG + chr8_1:75777859-75777878 Msa1214890:intron 20.0%
!!! TTTTTAATTGAGTATTCTCA+AGG + chr8_1:75777890-75777909 Msa1214890:intron 20.0%
!!! TTTTAATTGAGTATTCTCAA+GGG + chr8_1:75777891-75777910 Msa1214890:intron 20.0%
!!! TATTAACTTTTACAAGACTT+TGG - chr8_1:75777978-75777997 None:intergenic 20.0%
!! TCTTGTAAAAGTTAATAACT+TGG + chr8_1:75777981-75778000 Msa1214890:intron 20.0%
!!! GAAAAGTATTTGAAAACTAA+CGG + chr8_1:75778175-75778194 Msa1214890:CDS 20.0%
!! TAACAAAAATGAAGATAAGA+AGG + chr8_1:75778450-75778469 Msa1214890:CDS 20.0%
!! AACAAAAATGAAGATAAGAA+GGG + chr8_1:75778451-75778470 Msa1214890:CDS 20.0%
!! GAAATAAAACATATGCAAAT+AGG - chr8_1:75779394-75779413 None:intergenic 20.0%
!!! GGTTTTTTTTGTTGTTTGTT+TGG - chr8_1:75775669-75775688 None:intergenic 25.0%
! GATAAAGAGAGAAAATACTT+AGG - chr8_1:75775690-75775709 None:intergenic 25.0%
!!! TTTTGGGAATTTTTTTTTGC+AGG + chr8_1:75775819-75775838 Msa1214890:intron 25.0%
!!! TTTTTTTTTGCAGGTGAAAA+TGG + chr8_1:75775828-75775847 Msa1214890:intron 25.0%
!!! TAATTCTTTGATTTTCGTGT+TGG + chr8_1:75776028-75776047 Msa1214890:intron 25.0%
!! AAGATTCATGTCTAAGATTT+AGG + chr8_1:75776181-75776200 Msa1214890:intron 25.0%
!! TATTTTGTTCTCTGAATTTG+AGG + chr8_1:75776204-75776223 Msa1214890:intron 25.0%
! TGTGTTTATTTGTTTGTTCT+AGG + chr8_1:75776637-75776656 Msa1214890:intron 25.0%
! GTGTTTATTTGTTTGTTCTA+GGG + chr8_1:75776638-75776657 Msa1214890:intron 25.0%
! AAAAAAGGTTGTTACATAGT+GGG - chr8_1:75777112-75777131 None:intergenic 25.0%
! TAAAAAAGGTTGTTACATAG+TGG - chr8_1:75777113-75777132 None:intergenic 25.0%
! GAAAAAATAGTGAGTTTGTA+TGG - chr8_1:75777273-75777292 None:intergenic 25.0%
!!! ACAAACTCACTATTTTTTCT+AGG + chr8_1:75777274-75777293 Msa1214890:intron 25.0%
! TGTATAATACATAACTAGAG+GGG + chr8_1:75777318-75777337 Msa1214890:intron 25.0%
!!! TTTTTGGTACATAGAAGAAA+TGG + chr8_1:75777693-75777712 Msa1214890:intron 25.0%
!!! AACACAATCTCATTTTTCTT+GGG - chr8_1:75778112-75778131 None:intergenic 25.0%
! AATCAAATTCCGATATGTTT+GGG - chr8_1:75778204-75778223 None:intergenic 25.0%
! AAACATATCGGAATTTGATT+GGG + chr8_1:75778204-75778223 Msa1214890:CDS 25.0%
! AGAAACTACTTATATTGCAA+AGG + chr8_1:75778513-75778532 Msa1214890:CDS 25.0%
! AATAAGGATGAAGAAAAGAT+TGG + chr8_1:75778628-75778647 Msa1214890:CDS 25.0%
! AAAATAAAGAGGAAGATAAC+AGG + chr8_1:75778905-75778924 Msa1214890:CDS 25.0%
! AGAGTTAATTGTATTCATTC+AGG - chr8_1:75779072-75779091 None:intergenic 25.0%
! GAATGAATACAATTAACTCT+TGG + chr8_1:75779072-75779091 Msa1214890:three_prime_UTR 25.0%
!!! TGTGTGTGTTTTTAAGTGTA+AGG - chr8_1:75775603-75775622 None:intergenic 30.0%
! GGTTTTCATAATTAGGGATT+TGG + chr8_1:75776096-75776115 Msa1214890:intron 30.0%
TTCTCTGAATTTGAGGAATT+GGG + chr8_1:75776211-75776230 Msa1214890:intron 30.0%
ACGGTATTTCTTAAATTGTG+AGG + chr8_1:75776288-75776307 Msa1214890:intron 30.0%
TTTGCTTAAAGTGTACATTG+TGG + chr8_1:75776386-75776405 Msa1214890:intron 30.0%
! TCATTGATCTTCTTTTCACT+TGG + chr8_1:75776512-75776531 Msa1214890:intron 30.0%
! ACGACTTTTGTGCATTTTAT+AGG + chr8_1:75776564-75776583 Msa1214890:intron 30.0%
! TTTTGTGCATTTTATAGGTC+TGG + chr8_1:75776569-75776588 Msa1214890:intron 30.0%
! TTTGTGCATTTTATAGGTCT+GGG + chr8_1:75776570-75776589 Msa1214890:intron 30.0%
!! GTGTTTGTTTTCTAAACGAT+AGG + chr8_1:75776739-75776758 Msa1214890:intron 30.0%
AATAGTTAGACTTGGATAAC+AGG - chr8_1:75776784-75776803 None:intergenic 30.0%
!! TTACATTTTTGTTTAGCACC+AGG + chr8_1:75776802-75776821 Msa1214890:intron 30.0%
GAAAGAAAATATACTAAGCC+TGG - chr8_1:75776823-75776842 None:intergenic 30.0%
AAAATATACTTGAGCCAGTA+GGG - chr8_1:75776856-75776875 None:intergenic 30.0%
! TATATTTTCTTTCACACACC+AGG + chr8_1:75776868-75776887 Msa1214890:intron 30.0%
AGTGAGTTTGTATGGAAATT+GGG - chr8_1:75777265-75777284 None:intergenic 30.0%
TAGTGAGTTTGTATGGAAAT+TGG - chr8_1:75777266-75777285 None:intergenic 30.0%
GTATTATACAATAACCCAGA+GGG - chr8_1:75777308-75777327 None:intergenic 30.0%
TGTATTATACAATAACCCAG+AGG - chr8_1:75777309-75777328 None:intergenic 30.0%
! ATTTTCTTGAGACAAACAGT+TGG + chr8_1:75777379-75777398 Msa1214890:intron 30.0%
!!! CTATTACTGCAGTTTTAGAT+TGG + chr8_1:75777435-75777454 Msa1214890:intron 30.0%
ATGACCAAGAAACACAAAAA+TGG - chr8_1:75777490-75777509 None:intergenic 30.0%
CCAAAAACAAAAAACACCAT+AGG - chr8_1:75777680-75777699 None:intergenic 30.0%
!!! CCTATGGTGTTTTTTGTTTT+TGG + chr8_1:75777677-75777696 Msa1214890:intron 30.0%
!!! TTTTTTGGAAAGAACTGCAA+AGG - chr8_1:75778079-75778098 None:intergenic 30.0%
!! GAACACAATCTCATTTTTCT+TGG - chr8_1:75778113-75778132 None:intergenic 30.0%
! ATACTTTTCCAAATGCCTTT+TGG - chr8_1:75778164-75778183 None:intergenic 30.0%
AAGTATTTGAAAACTAACGG+TGG + chr8_1:75778178-75778197 Msa1214890:CDS 30.0%
CAATCAAATTCCGATATGTT+TGG - chr8_1:75778205-75778224 None:intergenic 30.0%
CAAACATATCGGAATTTGAT+TGG + chr8_1:75778203-75778222 Msa1214890:CDS 30.0%
AACATATCGGAATTTGATTG+GGG + chr8_1:75778205-75778224 Msa1214890:CDS 30.0%
! TTGTTAACAACTTCCTTTTC+CGG - chr8_1:75778436-75778455 None:intergenic 30.0%
TACTTATATTGCAAAGGATG+AGG + chr8_1:75778519-75778538 Msa1214890:CDS 30.0%
ACTTATATTGCAAAGGATGA+GGG + chr8_1:75778520-75778539 Msa1214890:CDS 30.0%
ACAAAGCAAGAAGAAAAGAT+TGG + chr8_1:75778667-75778686 Msa1214890:CDS 30.0%
ACTAAGCAAAACGAAAAGAT+TGG + chr8_1:75778706-75778725 Msa1214890:CDS 30.0%
ACGAAACAAGTAGAAAAGAT+CGG + chr8_1:75778784-75778803 Msa1214890:CDS 30.0%
CTTACAACACAATGTTACAT+GGG - chr8_1:75779259-75779278 None:intergenic 30.0%
TCTTACAACACAATGTTACA+TGG - chr8_1:75779260-75779279 None:intergenic 30.0%
AGAAAAAAAAAACGCTGCAA+AGG - chr8_1:75779300-75779319 None:intergenic 30.0%
TTCCAAATAAATGAGACATG+GGG - chr8_1:75779371-75779390 None:intergenic 30.0%
GTTCCAAATAAATGAGACAT+GGG - chr8_1:75779372-75779391 None:intergenic 30.0%
ATATTCAAGATCATGGCTAA+TGG - chr8_1:75779456-75779475 None:intergenic 30.0%
!!! GTGTGTTTTTAAGTGTAAGG+TGG - chr8_1:75775600-75775619 None:intergenic 35.0%
GTTCTCTGAATTTGAGGAAT+TGG + chr8_1:75776210-75776229 Msa1214890:intron 35.0%
GAAATACCGTCACGAAAATA+GGG - chr8_1:75776278-75776297 None:intergenic 35.0%
AGAAATACCGTCACGAAAAT+AGG - chr8_1:75776279-75776298 None:intergenic 35.0%
TACATTGTGGCTTACTCTTT+GGG + chr8_1:75776399-75776418 Msa1214890:intron 35.0%
! TCTTTGGGAATTTCCTACTT+TGG + chr8_1:75776414-75776433 Msa1214890:intron 35.0%
ATGATACAAACAACTAGCTC+AGG - chr8_1:75776496-75776515 None:intergenic 35.0%
TTCACTTGGACTGTTAAACA+TGG + chr8_1:75776526-75776545 Msa1214890:intron 35.0%
AAGAAATCATTACCATCCCA+TGG - chr8_1:75776601-75776620 None:intergenic 35.0%
GAAAATATACTTGAGCCAGT+AGG - chr8_1:75776857-75776876 None:intergenic 35.0%
ATACCCACATATAAGTCAGT+AGG + chr8_1:75776974-75776993 Msa1214890:intron 35.0%
TACCCACATATAAGTCAGTA+GGG + chr8_1:75776975-75776994 Msa1214890:intron 35.0%
CATTTACATGGTAAGAAACG+TGG - chr8_1:75777011-75777030 None:intergenic 35.0%
AAAATCATTGGCGATTGCAT+GGG - chr8_1:75777179-75777198 None:intergenic 35.0%
AAAAATCATTGGCGATTGCA+TGG - chr8_1:75777180-75777199 None:intergenic 35.0%
! AGATCACATCAGGTTAGTTA+GGG - chr8_1:75777236-75777255 None:intergenic 35.0%
! AAGATCACATCAGGTTAGTT+AGG - chr8_1:75777237-75777256 None:intergenic 35.0%
!!! CTGCAGTTTTAGATTGGAAA+TGG + chr8_1:75777441-75777460 Msa1214890:intron 35.0%
!! GTGTCCATTTTTGTGTTTCT+TGG + chr8_1:75777483-75777502 Msa1214890:intron 35.0%
CTGAATGGAAGGATTAAAGA+GGG + chr8_1:75777561-75777580 Msa1214890:intron 35.0%
ATTAACCTTGTTCAGTCTGA+AGG - chr8_1:75777596-75777615 None:intergenic 35.0%
CAGACTGAACAAGGTTAATT+TGG + chr8_1:75777597-75777616 Msa1214890:intron 35.0%
ACATAGAAGAAATGGCAAAG+TGG + chr8_1:75777701-75777720 Msa1214890:intron 35.0%
GCAAAAATGCCGAAATTGTT+AGG - chr8_1:75777763-75777782 None:intergenic 35.0%
CAGTTCTTTCCAAAAAAGTC+AGG + chr8_1:75778082-75778101 Msa1214890:intron 35.0%
! TTTCCAAATGCCTTTTGGTA+CGG - chr8_1:75778159-75778178 None:intergenic 35.0%
ACAATTCTCGATGATCTTCT+TGG - chr8_1:75778244-75778263 None:intergenic 35.0%
ATCATCGAGAATTGTTGAGA+AGG + chr8_1:75778249-75778268 Msa1214890:CDS 35.0%
TTCAAAGAAAGAAGCTTCTG+AGG + chr8_1:75778339-75778358 Msa1214890:CDS 35.0%
GCAATATAAGTAGTTTCTCC+AGG - chr8_1:75778511-75778530 None:intergenic 35.0%
CTTATATTGCAAAGGATGAG+GGG + chr8_1:75778521-75778540 Msa1214890:CDS 35.0%
AAAGAGAATATCGACGACAA+AGG + chr8_1:75778580-75778599 Msa1214890:CDS 35.0%
CATGGTTCATGATATGAACA+AGG + chr8_1:75778996-75779015 Msa1214890:CDS 35.0%
TTATCCTCAGATAGATCTAC+AGG - chr8_1:75779115-75779134 None:intergenic 35.0%
ATGTCTCTTCACAACATAGA+TGG - chr8_1:75779223-75779242 None:intergenic 35.0%
GGTTCCAAATAAATGAGACA+TGG - chr8_1:75779373-75779392 None:intergenic 35.0%
AGAATCTTGAAAACCCTAGC+AGG - chr8_1:75776247-75776266 None:intergenic 40.0%
GTACATTGTGGCTTACTCTT+TGG + chr8_1:75776398-75776417 Msa1214890:intron 40.0%
! TATAGGTCTGGGATTTACCA+TGG + chr8_1:75776581-75776600 Msa1214890:intron 40.0%
! ATAGGTCTGGGATTTACCAT+GGG + chr8_1:75776582-75776601 Msa1214890:intron 40.0%
AACAAACACTATACCCCATG+AGG - chr8_1:75776728-75776747 None:intergenic 40.0%
ACTGTGTTCAACATACGATG+TGG - chr8_1:75776936-75776955 None:intergenic 40.0%
!! CTCCCTACTGACTTATATGT+GGG - chr8_1:75776980-75776999 None:intergenic 40.0%
TATTTCCTGACATTGTGCAC+TGG + chr8_1:75777081-75777100 Msa1214890:intron 40.0%
TTTATCCAGTGCACAATGTC+AGG - chr8_1:75777089-75777108 None:intergenic 40.0%
GCATGGGTTTGTAAAACTCA+GGG - chr8_1:75777163-75777182 None:intergenic 40.0%
TGCATGGGTTTGTAAAACTC+AGG - chr8_1:75777164-75777183 None:intergenic 40.0%
! GATCACATCAGGTTAGTTAG+GGG - chr8_1:75777235-75777254 None:intergenic 40.0%
!! AACTAGAGGGGCATCTATAT+TGG + chr8_1:75777330-75777349 Msa1214890:intron 40.0%
TTCTTGGTCATTATGAGCCA+TGG + chr8_1:75777499-75777518 Msa1214890:intron 40.0%
CCTCTTTAATCCTTCCATTC+AGG - chr8_1:75777563-75777582 None:intergenic 40.0%
CCTGAATGGAAGGATTAAAG+AGG + chr8_1:75777560-75777579 Msa1214890:intron 40.0%
AAAAGCCTTCAGACTGAACA+AGG + chr8_1:75777588-75777607 Msa1214890:intron 40.0%
!! TCAGTAAGAGAGTACTAGCA+GGG - chr8_1:75777625-75777644 None:intergenic 40.0%
!! TTCAGTAAGAGAGTACTAGC+AGG - chr8_1:75777626-75777645 None:intergenic 40.0%
TAGAAGAAATGGCAAAGTGG+AGG + chr8_1:75777704-75777723 Msa1214890:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG - chr8_1:75777759-75777778 None:intergenic 40.0%
AGTGCCTAGTTAAACACCAT+AGG - chr8_1:75777811-75777830 None:intergenic 40.0%
!!! TTGGGTGTTCCTGACTTTTT+TGG - chr8_1:75778094-75778113 None:intergenic 40.0%
ATTGTGTTCACTTCACCAAC+AGG + chr8_1:75778124-75778143 Msa1214890:CDS 40.0%
GAGAATTGTTGAGAAGGTCA+AGG + chr8_1:75778255-75778274 Msa1214890:CDS 40.0%
!! TTCTTAGGAGGCTCACTTTT+TGG - chr8_1:75778298-75778317 None:intergenic 40.0%
TTTCTGCTACGTTTCTTAGG+AGG - chr8_1:75778310-75778329 None:intergenic 40.0%
GACTTTCTGCTACGTTTCTT+AGG - chr8_1:75778313-75778332 None:intergenic 40.0%
TGGCGAAACTAAGGATGATA+AGG + chr8_1:75778402-75778421 Msa1214890:CDS 40.0%
GTTAAAGAGTCCATTCAACC+TGG + chr8_1:75778490-75778509 Msa1214890:CDS 40.0%
! AGTAGTTTCTCCAGGTTGAA+TGG - chr8_1:75778503-75778522 None:intergenic 40.0%
! GTCTGGAGTTGTTCAGAATA+AGG + chr8_1:75778612-75778631 Msa1214890:CDS 40.0%
AGTGGAAGGCGAAAATAAAG+AGG + chr8_1:75778894-75778913 Msa1214890:CDS 40.0%
TATGAACAAGGCTGAATCAG+AGG + chr8_1:75779008-75779027 Msa1214890:CDS 40.0%
GAATGGAAGCTGAATTGTTG+AGG + chr8_1:75779038-75779057 Msa1214890:exon 40.0%
CTCTTCACAACATAGATGGA+TGG - chr8_1:75779219-75779238 None:intergenic 40.0%
GCAAAGGACATCACATTACA+GGG - chr8_1:75779284-75779303 None:intergenic 40.0%
TGCAAAGGACATCACATTAC+AGG - chr8_1:75779285-75779304 None:intergenic 40.0%
GAAGTTGGATAACACTGCAA+AGG - chr8_1:75779345-75779364 None:intergenic 40.0%
TGCCCCATGTCTCATTTATT+TGG + chr8_1:75779366-75779385 Msa1214890:three_prime_UTR 40.0%
TGAAATTGAAGCGACACGTG+TGG - chr8_1:75775504-75775523 None:intergenic 45.0%
AATGGCGAGTTCAGTTGAGA+AGG + chr8_1:75775846-75775865 Msa1214890:exon 45.0%
TCAGTTGAGAAGGAAGGTTC+TGG + chr8_1:75775856-75775875 Msa1214890:CDS 45.0%
TCCATCTGGTTGGACCAAAA+AGG + chr8_1:75775936-75775955 Msa1214890:CDS 45.0%
!! ACCTTTTTGGTCCAACCAGA+TGG - chr8_1:75775940-75775959 None:intergenic 45.0%
!!! TGGGTTTTGAGTTACCTGCT+AGG + chr8_1:75776230-75776249 Msa1214890:intron 45.0%
!!! GGGTTTTGAGTTACCTGCTA+GGG + chr8_1:75776231-75776250 Msa1214890:intron 45.0%
! CTGTGTCCCTATTTTCGTGA+CGG + chr8_1:75776269-75776288 Msa1214890:intron 45.0%
ACAATGATAGATGGGCCTCA+TGG + chr8_1:75776710-75776729 Msa1214890:intron 45.0%
CAATGATAGATGGGCCTCAT+GGG + chr8_1:75776711-75776730 Msa1214890:intron 45.0%
AATGATAGATGGGCCTCATG+GGG + chr8_1:75776712-75776731 Msa1214890:intron 45.0%
TATACTTGAGCCAGTAGGGA+TGG - chr8_1:75776852-75776871 None:intergenic 45.0%
TTGCTAACCAACACTAAGCC+TGG - chr8_1:75776889-75776908 None:intergenic 45.0%
!! CCTCCCTACTGACTTATATG+TGG - chr8_1:75776981-75777000 None:intergenic 45.0%
CCACATATAAGTCAGTAGGG+AGG + chr8_1:75776978-75776997 Msa1214890:intron 45.0%
TGGGAACTGAAGATCACATC+AGG - chr8_1:75777246-75777265 None:intergenic 45.0%
GCACTGAAGACAAGTATCCA+TGG - chr8_1:75777519-75777538 None:intergenic 45.0%
CTTCCATTCAGGCTATACCT+GGG - chr8_1:75777552-75777571 None:intergenic 45.0%
TGCTAGCTCATAACTGCCTA+TGG + chr8_1:75777661-75777680 Msa1214890:intron 45.0%
! GCATTTTTGCCTGTTGAGCT+AGG + chr8_1:75777773-75777792 Msa1214890:intron 45.0%
CCAATAAGTCCTAGCTCAAC+AGG - chr8_1:75777785-75777804 None:intergenic 45.0%
CCTGTTGAGCTAGGACTTAT+TGG + chr8_1:75777782-75777801 Msa1214890:intron 45.0%
TAGGACTTATTGGACGCCTA+TGG + chr8_1:75777792-75777811 Msa1214890:intron 45.0%
GACGCCTATGGTGTTTAACT+AGG + chr8_1:75777804-75777823 Msa1214890:intron 45.0%
!! GATCCGTACCAAAAGGCATT+TGG + chr8_1:75778153-75778172 Msa1214890:CDS 45.0%
TAACGGTGGCCCAAACATAT+CGG + chr8_1:75778192-75778211 Msa1214890:CDS 45.0%
GGATGATAAGGATGTAGAGC+CGG + chr8_1:75778414-75778433 Msa1214890:CDS 45.0%
TAAGGATGTAGAGCCGGAAA+AGG + chr8_1:75778420-75778439 Msa1214890:CDS 45.0%
CAAATCTCCATCAGCAGTGT+TGG - chr8_1:75778551-75778570 None:intergenic 45.0%
! TTTTGCTTAGTCTCCTCTGC+TGG - chr8_1:75778697-75778716 None:intergenic 45.0%
GGAAAAGATTGAACAGCCAG+TGG + chr8_1:75778756-75778775 Msa1214890:CDS 45.0%
AAAGATTGAACAGCCAGTGG+AGG + chr8_1:75778759-75778778 Msa1214890:CDS 45.0%
! TCTTGTTTCGTCTCTTCCAC+TGG - chr8_1:75778814-75778833 None:intergenic 45.0%
GTGGAAGAGACGAAACAAGA+TGG + chr8_1:75778814-75778833 Msa1214890:CDS 45.0%
GAAGAGACGAAACAAGATGG+TGG + chr8_1:75778817-75778836 Msa1214890:CDS 45.0%
!! ACGAAACAAGATGGTGGATC+TGG + chr8_1:75778823-75778842 Msa1214890:CDS 45.0%
!! CGAAACAAGATGGTGGATCT+GGG + chr8_1:75778824-75778843 Msa1214890:CDS 45.0%
!! GAAACAAGATGGTGGATCTG+GGG + chr8_1:75778825-75778844 Msa1214890:CDS 45.0%
GCACGATGAAGCAAACTACA+TGG + chr8_1:75778978-75778997 Msa1214890:CDS 45.0%
GAATCAGAGGTGACTGTGAA+TGG + chr8_1:75779021-75779040 Msa1214890:CDS 45.0%
GGATAACACTGCAAAGGACA+TGG - chr8_1:75779339-75779358 None:intergenic 45.0%
GCGAGTTCAGTTGAGAAGGA+AGG + chr8_1:75775850-75775869 Msa1214890:CDS 50.0%
!! AAGGAAGGTTCTGGTGCTGT+CGG + chr8_1:75775865-75775884 Msa1214890:CDS 50.0%
ACCAGAAGAGCCTGTTTCGT+TGG + chr8_1:75775903-75775922 Msa1214890:CDS 50.0%
TCCAACGAAACAGGCTCTTC+TGG - chr8_1:75775907-75775926 None:intergenic 50.0%
! GTCTGGGATTTACCATGGGA+TGG + chr8_1:75776586-75776605 Msa1214890:intron 50.0%
TTTCGACAGACCATCCCTAC+TGG + chr8_1:75776839-75776858 Msa1214890:intron 50.0%
TCACACACCAGGCTTAGTGT+TGG + chr8_1:75776879-75776898 Msa1214890:intron 50.0%
GATGTGGCTCATGCTCTAGT+CGG - chr8_1:75776920-75776939 None:intergenic 50.0%
TTCTAGGTACATACGCCCTC+TGG + chr8_1:75777290-75777309 Msa1214890:intron 50.0%
TCTAGGTACATACGCCCTCT+GGG + chr8_1:75777291-75777310 Msa1214890:intron 50.0%
ATTCAGGCTATACCTGGGAG+AGG - chr8_1:75777547-75777566 None:intergenic 50.0%
TCTCCCAGGTATAGCCTGAA+TGG + chr8_1:75777546-75777565 Msa1214890:intron 50.0%
CCTTCCATTCAGGCTATACC+TGG - chr8_1:75777553-75777572 None:intergenic 50.0%
CCAGGTATAGCCTGAATGGA+AGG + chr8_1:75777550-75777569 Msa1214890:intron 50.0%
! AAATGGCAAAGTGGAGGTGC+CGG + chr8_1:75777710-75777729 Msa1214890:intron 50.0%
GACGTCCGGCCTAACAATTT+CGG + chr8_1:75777751-75777770 Msa1214890:intron 50.0%
GTTCACTTCACCAACAGGAG+AGG + chr8_1:75778129-75778148 Msa1214890:CDS 50.0%
GAGAGGAGATCCGTACCAAA+AGG + chr8_1:75778146-75778165 Msa1214890:CDS 50.0%
TCGGAATTTGATTGGGGCAC+TGG + chr8_1:75778211-75778230 Msa1214890:CDS 50.0%
! CGGAATTTGATTGGGGCACT+GGG + chr8_1:75778212-75778231 Msa1214890:CDS 50.0%
!! GGAATTTGATTGGGGCACTG+GGG + chr8_1:75778213-75778232 Msa1214890:CDS 50.0%
!!! TCACTTTTTGGCTCTGCTGG+AGG - chr8_1:75778286-75778305 None:intergenic 50.0%
AGCAGAGGAGACAAAAGACG+TGG + chr8_1:75778366-75778385 Msa1214890:CDS 50.0%
GACGTGGAAATGCAAGAAGC+TGG + chr8_1:75778382-75778401 Msa1214890:CDS 50.0%
GCAAGAAGCTGGCGAAACTA+AGG + chr8_1:75778393-75778412 Msa1214890:CDS 50.0%
GGGAAATCCAACACTGCTGA+TGG + chr8_1:75778541-75778560 Msa1214890:CDS 50.0%
TATCGACGACAAAGGAGCTG+AGG + chr8_1:75778588-75778607 Msa1214890:CDS 50.0%
ATCGACGACAAAGGAGCTGA+GGG + chr8_1:75778589-75778608 Msa1214890:CDS 50.0%
AAAGATTGGACTGCCAGCAG+AGG + chr8_1:75778642-75778661 Msa1214890:CDS 50.0%
TCTTGCTTTGTCTCCTCTGC+TGG - chr8_1:75778658-75778677 None:intergenic 50.0%
AAAGATTGGACAGCCAGCAG+AGG + chr8_1:75778681-75778700 Msa1214890:CDS 50.0%
CGAAAAGATTGGACAGCCAG+CGG + chr8_1:75778717-75778736 Msa1214890:CDS 50.0%
ACTTGTTTCGTCTCCTCCAC+TGG - chr8_1:75778775-75778794 None:intergenic 50.0%
AGAAAAGATCGGACAGCCAG+TGG + chr8_1:75778795-75778814 Msa1214890:CDS 50.0%
TGCCCCTACTGCTGAGAAAA+CGG + chr8_1:75778867-75778886 Msa1214890:CDS 50.0%
!! AGCCGTTTTCTCAGCAGTAG+GGG - chr8_1:75778872-75778891 None:intergenic 50.0%
!! CAGCCGTTTTCTCAGCAGTA+GGG - chr8_1:75778873-75778892 None:intergenic 50.0%
!! TCAGCCGTTTTCTCAGCAGT+AGG - chr8_1:75778874-75778893 None:intergenic 50.0%
TGCTGAGAAAACGGCTGAAG+TGG + chr8_1:75778876-75778895 Msa1214890:CDS 50.0%
GAGAAAACGGCTGAAGTGGA+AGG + chr8_1:75778880-75778899 Msa1214890:CDS 50.0%
AGATAACAGGATCACCCGTG+AGG + chr8_1:75778918-75778937 Msa1214890:CDS 50.0%
TCTTGTCGCGTCTTTCTCCT+TGG - chr8_1:75778956-75778975 None:intergenic 50.0%
GACGCCTGTAGATCTATCTG+AGG + chr8_1:75779108-75779127 Msa1214890:three_prime_UTR 50.0%
TGAGACATGGGGCATGAAGT+TGG - chr8_1:75779360-75779379 None:intergenic 50.0%
GCAGGTAGCTCCAACGAAAC+AGG - chr8_1:75775916-75775935 None:intergenic 55.0%
TTGGAGCTACCTGCTCCATC+TGG + chr8_1:75775922-75775941 Msa1214890:CDS 55.0%
AGCTACCTGCTCCATCTGGT+TGG + chr8_1:75775926-75775945 Msa1214890:CDS 55.0%
TTGGTCCAACCAGATGGAGC+AGG - chr8_1:75775934-75775953 None:intergenic 55.0%
GCTCATGCTCTAGTCGGCAT+TGG - chr8_1:75776914-75776933 None:intergenic 55.0%
!! AATGGCAAAGTGGAGGTGCC+GGG + chr8_1:75777711-75777730 Msa1214890:intron 55.0%
GTACGGATCTCCTCTCCTGT+TGG - chr8_1:75778142-75778161 None:intergenic 55.0%
!!! GGCTCACTTTTTGGCTCTGC+TGG - chr8_1:75778289-75778308 None:intergenic 55.0%
! AGCTTCTGAGGACGAAGCAG+AGG + chr8_1:75778351-75778370 Msa1214890:CDS 55.0%
TCGACGACAAAGGAGCTGAG+GGG + chr8_1:75778590-75778609 Msa1214890:CDS 55.0%
AAAGATTGGACAGCCAGCGG+AGG + chr8_1:75778720-75778739 Msa1214890:CDS 55.0%
TGGTTTCTCCTCCAGCCTCA+CGG - chr8_1:75778936-75778955 None:intergenic 55.0%
TGAGGCTGGAGGAGAAACCA+AGG + chr8_1:75778936-75778955 Msa1214890:CDS 55.0%
TCAGTGCTCACACCTCTCCC+AGG + chr8_1:75777532-75777551 Msa1214890:intron 60.0%
!! ATGGCAAAGTGGAGGTGCCG+GGG + chr8_1:75777712-75777731 Msa1214890:intron 60.0%
!! AAAGTGGAGGTGCCGGGGTT+CGG + chr8_1:75777717-75777736 Msa1214890:intron 60.0%
TTAGGCCGGACGTCTTGACC+GGG - chr8_1:75777745-75777764 None:intergenic 60.0%
GTTAGGCCGGACGTCTTGAC+CGG - chr8_1:75777746-75777765 None:intergenic 60.0%
GACAAAGGAGCTGAGGGGTC+TGG + chr8_1:75778595-75778614 Msa1214890:CDS 60.0%
TCCTGCTTTGTCTCCTCCGC+TGG - chr8_1:75778736-75778755 None:intergenic 60.0%
AGCGGAGGAGACAAAGCAGG+AGG + chr8_1:75778735-75778754 Msa1214890:CDS 60.0%
AACAGGATCACCCGTGAGGC+TGG + chr8_1:75778922-75778941 Msa1214890:CDS 60.0%
GGTTTCTCCTCCAGCCTCAC+GGG - chr8_1:75778935-75778954 None:intergenic 60.0%
TAGGCCGGACGTCTTGACCG+GGG - chr8_1:75777744-75777763 None:intergenic 65.0%
GCCAGCGGAGGAGACAAAGC+AGG + chr8_1:75778732-75778751 Msa1214890:CDS 65.0%
AGGATCACCCGTGAGGCTGG+AGG + chr8_1:75778925-75778944 Msa1214890:CDS 65.0%
! GGTGCTGTCGGTGCAGCTGC+AGG + chr8_1:75775877-75775896 Msa1214890:CDS 70.0%
CTTGACCGGGGTCCGAACCC+CGG - chr8_1:75777732-75777751 None:intergenic 70.0%
CGGACCCCGGTCAAGACGTC+CGG + chr8_1:75777737-75777756 Msa1214890:intron 70.0%
!! AGGTGCCGGGGTTCGGACCC+CGG + chr8_1:75777724-75777743 Msa1214890:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 75775493 75779476 75775493 ID=Msa1214890;Name=Msa1214890
chr8_1 mRNA 75775493 75779476 75775493 ID=Msa1214890-mRNA-1;Parent=Msa1214890;Name=Msa1214890-mRNA-1;_AED=0.02;_eAED=0.02;_QI=205|1|1|1|0.5|0.33|3|426|358
chr8_1 exon 75775493 75775691 75775493 ID=Msa1214890-mRNA-1:exon:25989;Parent=Msa1214890-mRNA-1
chr8_1 exon 75775841 75775957 75775841 ID=Msa1214890-mRNA-1:exon:25990;Parent=Msa1214890-mRNA-1
chr8_1 exon 75778085 75779476 75778085 ID=Msa1214890-mRNA-1:exon:25991;Parent=Msa1214890-mRNA-1
chr8_1 five_prime_UTR 75775493 75775691 75775493 ID=Msa1214890-mRNA-1:five_prime_utr;Parent=Msa1214890-mRNA-1
chr8_1 five_prime_UTR 75775841 75775846 75775841 ID=Msa1214890-mRNA-1:five_prime_utr;Parent=Msa1214890-mRNA-1
chr8_1 CDS 75775847 75775957 75775847 ID=Msa1214890-mRNA-1:cds;Parent=Msa1214890-mRNA-1
chr8_1 CDS 75778085 75779050 75778085 ID=Msa1214890-mRNA-1:cds;Parent=Msa1214890-mRNA-1
chr8_1 three_prime_UTR 75779051 75779476 75779051 ID=Msa1214890-mRNA-1:three_prime_utr;Parent=Msa1214890-mRNA-1
Gene Sequence

>Msa1214890

ATGGCGAGTTCAGTTGAGAAGGAAGGTTCTGGTGCTGTCGGTGCAGCTGCAGGTGCACCAGAAGAGCCTGTTTCGTTGGAGCTACCTGCTCCATCTGGTTGGACCAAAAAGTTCTTTCCAAAAAAGTCAGGAACACCCAAGAAAAATGAGATTGTGTTCACTTCACCAACAGGAGAGGAGATCCGTACCAAAAGGCATTTGGAAAAGTATTTGAAAACTAACGGTGGCCCAAACATATCGGAATTTGATTGGGGCACTGGGGAGACTCCAAGAAGATCATCGAGAATTGTTGAGAAGGTCAAGGCAGCTCCTCCAGCAGAGCCAAAAAGTGAGCCTCCTAAGAAACGTAGCAGAAAGTCATCAGCTTCAAAGAAAGAAGCTTCTGAGGACGAAGCAGAGGAGACAAAAGACGTGGAAATGCAAGAAGCTGGCGAAACTAAGGATGATAAGGATGTAGAGCCGGAAAAGGAAGTTGTTAACAAAAATGAAGATAAGAAGGGAGCAGAAGATGCTGATGTTAAAGAGTCCATTCAACCTGGAGAAACTACTTATATTGCAAAGGATGAGGGGAAATCCAACACTGCTGATGGAGATTTGCAAGCATCAAAAGAGAATATCGACGACAAAGGAGCTGAGGGGTCTGGAGTTGTTCAGAATAAGGATGAAGAAAAGATTGGACTGCCAGCAGAGGAGACAAAGCAAGAAGAAAAGATTGGACAGCCAGCAGAGGAGACTAAGCAAAACGAAAAGATTGGACAGCCAGCGGAGGAGACAAAGCAGGAGGAAAAGATTGAACAGCCAGTGGAGGAGACGAAACAAGTAGAAAAGATCGGACAGCCAGTGGAAGAGACGAAACAAGATGGTGGATCTGGGGAAGCAGAGAAATCTGAAGCTGCCCCTACTGCTGAGAAAACGGCTGAAGTGGAAGGCGAAAATAAAGAGGAAGATAACAGGATCACCCGTGAGGCTGGAGGAGAAACCAAGGAGAAAGACGCGACAAGAGTGCACGATGAAGCAAACTACATGGTTCATGATATGAACAAGGCTGAATCAGAGGTGACTGTGAATGGAAGCTGA

Protein sequence

>Msa1214890

MASSVEKEGSGAVGAAAGAPEEPVSLELPAPSGWTKKFFPKKSGTPKKNEIVFTSPTGEEIRTKRHLEKYLKTNGGPNISEFDWGTGETPRRSSRIVEKVKAAPPAEPKSEPPKKRSRKSSASKKEASEDEAEETKDVEMQEAGETKDDKDVEPEKEVVNKNEDKKGAEDADVKESIQPGETTYIAKDEGKSNTADGDLQASKENIDDKGAEGSGVVQNKDEEKIGLPAEETKQEEKIGQPAEETKQNEKIGQPAEETKQEEKIEQPVEETKQVEKIGQPVEETKQDGGSGEAEKSEAAPTAEKTAEVEGENKEEDNRITREAGGETKEKDATRVHDEANYMVHDMNKAESEVTVNGS*