Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232320 | XP_003593195.1 | 92.348 | 379 | 10 | 2 | 1 | 376 | 1 | 363 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232320 | G7INV7 | 92.348 | 379 | 10 | 2 | 1 | 376 | 1 | 363 | 0.0 | 695 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010770 | Msa0232320 | 0.800489 | 1.407019e-48 | -8.615850e-47 |
| Msa0027390 | Msa0232320 | 0.816970 | 4.200932e-52 | -8.615850e-47 |
| Msa0031180 | Msa0232320 | 0.800934 | 1.141802e-48 | -8.615850e-47 |
| Msa0044020 | Msa0232320 | 0.802878 | 4.550923e-49 | -8.615850e-47 |
| Msa0124340 | Msa0232320 | 0.800775 | 1.230269e-48 | -8.615850e-47 |
| Msa0142480 | Msa0232320 | 0.807379 | 5.202184e-50 | -8.615850e-47 |
| Msa0142950 | Msa0232320 | 0.801806 | 7.566506e-49 | -8.615850e-47 |
| Msa0156230 | Msa0232320 | 0.808763 | 2.640200e-50 | -8.615850e-47 |
| Msa0165300 | Msa0232320 | 0.830651 | 2.605051e-55 | -8.615850e-47 |
| Msa0191250 | Msa0232320 | 0.806013 | 1.010658e-49 | -8.615850e-47 |
| Msa0205850 | Msa0232320 | 0.839127 | 1.907957e-57 | -8.615850e-47 |
| Msa0223740 | Msa0232320 | 0.805382 | 1.371745e-49 | -8.615850e-47 |
| Msa0227400 | Msa0232320 | 0.800153 | 1.646877e-48 | -8.615850e-47 |
| Msa0232320 | Msa0242430 | 0.803257 | 3.799442e-49 | -8.615850e-47 |
| Msa0232320 | Msa0245850 | 0.819957 | 8.841187e-53 | -8.615850e-47 |
| Msa0232320 | Msa0245940 | 0.825400 | 4.785582e-54 | -8.615850e-47 |
| Msa0232320 | Msa0260830 | 0.810040 | 1.404756e-50 | -8.615850e-47 |
| Msa0232320 | Msa0262510 | 0.808390 | 3.170390e-50 | -8.615850e-47 |
| Msa0232320 | Msa0276920 | 0.831998 | 1.214684e-55 | -8.615850e-47 |
| Msa0232320 | Msa0284520 | 0.800731 | 1.256004e-48 | -8.615850e-47 |
| Msa0232320 | Msa0287310 | 0.818064 | 2.382411e-52 | -8.615850e-47 |
| Msa0232320 | Msa0299730 | 0.818080 | 2.362190e-52 | -8.615850e-47 |
| Msa0232320 | Msa0308550 | 0.811772 | 5.922789e-51 | -8.615850e-47 |
| Msa0232320 | Msa0316800 | 0.823008 | 1.745114e-53 | -8.615850e-47 |
| Msa0232320 | Msa0321190 | 0.803938 | 2.744487e-49 | -8.615850e-47 |
| Msa0232320 | Msa0325850 | 0.823055 | 1.701910e-53 | -8.615850e-47 |
| Msa0232320 | Msa0333920 | 0.820587 | 6.340170e-53 | -8.615850e-47 |
| Msa0232320 | Msa0334040 | 0.815914 | 7.240205e-52 | -8.615850e-47 |
| Msa0232320 | Msa0335040 | 0.812274 | 4.604923e-51 | -8.615850e-47 |
| Msa0232320 | Msa0351380 | 0.819438 | 1.161563e-52 | -8.615850e-47 |
| Msa0232320 | Msa0355270 | 0.807943 | 3.948991e-50 | -8.615850e-47 |
| Msa0232320 | Msa0395870 | 0.809771 | 1.604488e-50 | -8.615850e-47 |
| Msa0232320 | Msa0413450 | 0.803887 | 2.812439e-49 | -8.615850e-47 |
| Msa0232320 | Msa0417880 | 0.806751 | 7.064360e-50 | -8.615850e-47 |
| Msa0232320 | Msa0423900 | 0.812042 | 5.173409e-51 | -8.615850e-47 |
| Msa0232320 | Msa0426330 | 0.810261 | 1.258318e-50 | -8.615850e-47 |
| Msa0232320 | Msa0435220 | 0.812123 | 4.967308e-51 | -8.615850e-47 |
| Msa0232320 | Msa0452960 | 0.809949 | 1.469171e-50 | -8.615850e-47 |
| Msa0232320 | Msa0468290 | 0.804919 | 1.714558e-49 | -8.615850e-47 |
| Msa0232320 | Msa0484780 | 0.849656 | 2.811469e-60 | -8.615850e-47 |
| Msa0232320 | Msa0513440 | 0.811559 | 6.591168e-51 | -8.615850e-47 |
| Msa0232320 | Msa0521880 | 0.801873 | 7.330645e-49 | -8.615850e-47 |
| Msa0232320 | Msa0556860 | 0.818119 | 2.314653e-52 | -8.615850e-47 |
| Msa0232320 | Msa0557070 | 0.800591 | 1.341239e-48 | -8.615850e-47 |
| Msa0232320 | Msa0558230 | 0.813726 | 2.212022e-51 | -8.615850e-47 |
| Msa0232320 | Msa0602120 | 0.800134 | 1.661551e-48 | -8.615850e-47 |
| Msa0232320 | Msa0614650 | 0.805330 | 1.406192e-49 | -8.615850e-47 |
| Msa0232320 | Msa0633840 | 0.813398 | 2.612154e-51 | -8.615850e-47 |
| Msa0232320 | Msa0638070 | 0.816025 | 6.840058e-52 | -8.615850e-47 |
| Msa0232320 | Msa0650070 | 0.822265 | 2.597771e-53 | -8.615850e-47 |
| Msa0232320 | Msa0657750 | 0.825007 | 5.926993e-54 | -8.615850e-47 |
| Msa0232320 | Msa0682550 | 0.821194 | 4.596829e-53 | -8.615850e-47 |
| Msa0232320 | Msa0684500 | 0.802297 | 5.999111e-49 | -8.615850e-47 |
| Msa0232320 | Msa0685750 | 0.808194 | 3.491989e-50 | -8.615850e-47 |
| Msa0232320 | Msa0693380 | 0.823959 | 1.046144e-53 | -8.615850e-47 |
| Msa0232320 | Msa0716860 | 0.802309 | 5.963785e-49 | -8.615850e-47 |
| Msa0232320 | Msa0739120 | 0.805371 | 1.378861e-49 | -8.615850e-47 |
| Msa0232320 | Msa0754720 | -0.806603 | 7.593746e-50 | -8.615850e-47 |
| Msa0232320 | Msa0756530 | 0.806330 | 8.667795e-50 | -8.615850e-47 |
| Msa0232320 | Msa0767220 | 0.820668 | 6.072953e-53 | -8.615850e-47 |
| Msa0232320 | Msa0788710 | 0.830583 | 2.706866e-55 | -8.615850e-47 |
| Msa0232320 | Msa0795660 | 0.817295 | 3.551224e-52 | -8.615850e-47 |
| Msa0232320 | Msa0800700 | 0.819103 | 1.384683e-52 | -8.615850e-47 |
| Msa0232320 | Msa0818630 | 0.801596 | 8.358169e-49 | -8.615850e-47 |
| Msa0232320 | Msa0828920 | 0.833018 | 6.783662e-56 | -8.615850e-47 |
| Msa0232320 | Msa0829620 | 0.809427 | 1.902906e-50 | -8.615850e-47 |
| Msa0232320 | Msa0846140 | 0.836554 | 8.743672e-57 | -8.615850e-47 |
| Msa0232320 | Msa0867890 | 0.801011 | 1.101136e-48 | -8.615850e-47 |
| Msa0232320 | Msa0869100 | 0.835515 | 1.604702e-56 | -8.615850e-47 |
| Msa0232320 | Msa0881020 | 0.814367 | 1.597203e-51 | -8.615850e-47 |
| Msa0232320 | Msa0881030 | 0.842126 | 3.128576e-58 | -8.615850e-47 |
| Msa0232320 | Msa0891600 | -0.808536 | 2.951663e-50 | -8.615850e-47 |
| Msa0232320 | Msa0898660 | 0.816045 | 6.770886e-52 | -8.615850e-47 |
| Msa0232320 | Msa0908050 | 0.818564 | 1.835136e-52 | -8.615850e-47 |
| Msa0232320 | Msa0908170 | 0.808117 | 3.626375e-50 | -8.615850e-47 |
| Msa0232320 | Msa0910980 | -0.808945 | 2.413108e-50 | -8.615850e-47 |
| Msa0232320 | Msa0932350 | 0.811896 | 5.565790e-51 | -8.615850e-47 |
| Msa0232320 | Msa0933230 | 0.807751 | 4.337005e-50 | -8.615850e-47 |
| Msa0232320 | Msa0933310 | 0.801338 | 9.438541e-49 | -8.615850e-47 |
| Msa0232320 | Msa0933440 | 0.816227 | 6.163764e-52 | -8.615850e-47 |
| Msa0232320 | Msa0934050 | 0.804792 | 1.822014e-49 | -8.615850e-47 |
| Msa0232320 | Msa0959010 | 0.825846 | 3.751865e-54 | -8.615850e-47 |
| Msa0232320 | Msa0959840 | 0.803400 | 3.549091e-49 | -8.615850e-47 |
| Msa0232320 | Msa0960160 | 0.818220 | 2.195994e-52 | -8.615850e-47 |
| Msa0232320 | Msa0969520 | 0.811214 | 7.830724e-51 | -8.615850e-47 |
| Msa0232320 | Msa0975940 | 0.801552 | 8.531737e-49 | -8.615850e-47 |
| Msa0232320 | Msa0976330 | 0.800861 | 1.181792e-48 | -8.615850e-47 |
| Msa0232320 | Msa0993530 | 0.815420 | 9.329922e-52 | -8.615850e-47 |
| Msa0232320 | Msa1004420 | 0.806957 | 6.392271e-50 | -8.615850e-47 |
| Msa0232320 | Msa1009780 | 0.817895 | 2.601439e-52 | -8.615850e-47 |
| Msa0232320 | Msa1010070 | 0.813431 | 2.568801e-51 | -8.615850e-47 |
| Msa0232320 | Msa1046300 | 0.806512 | 7.934841e-50 | -8.615850e-47 |
| Msa0232320 | Msa1063950 | 0.817168 | 3.792390e-52 | -8.615850e-47 |
| Msa0232320 | Msa1065610 | 0.810031 | 1.410911e-50 | -8.615850e-47 |
| Msa0232320 | Msa1082500 | 0.830979 | 2.164455e-55 | -8.615850e-47 |
| Msa0232320 | Msa1108160 | 0.812551 | 4.005126e-51 | -8.615850e-47 |
| Msa0232320 | Msa1111180 | 0.800934 | 1.141802e-48 | -8.615850e-47 |
| Msa0232320 | Msa1125550 | 0.800421 | 1.452768e-48 | -8.615850e-47 |
| Msa0232320 | Msa1127650 | 0.805151 | 1.532742e-49 | -8.615850e-47 |
| Msa0232320 | Msa1140690 | 0.801730 | 7.843158e-49 | -8.615850e-47 |
| Msa0232320 | Msa1165520 | 0.801434 | 9.021926e-49 | -8.615850e-47 |
| Msa0232320 | Msa1170280 | 0.815954 | 7.092833e-52 | -8.615850e-47 |
| Msa0232320 | Msa1172670 | 0.802220 | 6.220459e-49 | -8.615850e-47 |
| Msa0232320 | Msa1176270 | 0.804553 | 2.044125e-49 | -8.615850e-47 |
| Msa0232320 | Msa1185540 | 0.804834 | 1.785607e-49 | -8.615850e-47 |
| Msa0232320 | Msa1199570 | 0.805290 | 1.433537e-49 | -8.615850e-47 |
| Msa0232320 | Msa1214890 | 0.833515 | 5.103124e-56 | -8.615850e-47 |
| Msa0232320 | Msa1217860 | 0.801446 | 8.968500e-49 | -8.615850e-47 |
| Msa0232320 | Msa1224830 | 0.806225 | 9.122659e-50 | -8.615850e-47 |
| Msa0232320 | Msa1228290 | 0.819636 | 1.046835e-52 | -8.615850e-47 |
| Msa0232320 | Msa1228890 | 0.811356 | 7.294700e-51 | -8.615850e-47 |
| Msa0232320 | Msa1243420 | 0.804746 | 1.863319e-49 | -8.615850e-47 |
| Msa0232320 | Msa1252190 | 0.809301 | 2.024597e-50 | -8.615850e-47 |
| Msa0232320 | Msa1254710 | 0.801738 | 7.814896e-49 | -8.615850e-47 |
| Msa0232320 | Msa1280560 | 0.824612 | 7.346741e-54 | -8.615850e-47 |
| Msa0232320 | Msa1314340 | 0.821166 | 4.664377e-53 | -8.615850e-47 |
| Msa0232320 | Msa1320740 | 0.807591 | 4.689904e-50 | -8.615850e-47 |
| Msa0232320 | Msa1331910 | 0.826977 | 2.017397e-54 | -8.615850e-47 |
| Msa0232320 | Msa1333680 | 0.815918 | 7.228368e-52 | -8.615850e-47 |
| Msa0232320 | Msa1333730 | 0.810914 | 9.095922e-51 | -8.615850e-47 |
| Msa0232320 | Msa1338250 | 0.829662 | 4.541135e-55 | -8.615850e-47 |
| Msa0232320 | Msa1348360 | 0.830553 | 2.753072e-55 | -8.615850e-47 |
| Msa0232320 | Msa1348880 | 0.800553 | 1.365721e-48 | -8.615850e-47 |
| Msa0232320 | Msa1349270 | 0.804644 | 1.956803e-49 | -8.615850e-47 |
| Msa0232320 | Msa1386230 | 0.803815 | 2.911329e-49 | -8.615850e-47 |
| Msa0232320 | Msa1388450 | 0.814270 | 1.677917e-51 | -8.615850e-47 |
| Msa0232320 | Msa1390230 | 0.810552 | 1.089079e-50 | -8.615850e-47 |
| Msa0232320 | Msa1415940 | 0.812030 | 5.205236e-51 | -8.615850e-47 |
| Msa0232320 | Msa1427060 | 0.812975 | 3.233695e-51 | -8.615850e-47 |
| Msa0232320 | Msa1431040 | 0.814375 | 1.591072e-51 | -8.615850e-47 |
| Msa0232320 | Msa1439960 | 0.803546 | 3.311014e-49 | -8.615850e-47 |
| Msa0232320 | Msa1460020 | 0.809453 | 1.878432e-50 | -8.615850e-47 |
| Msa0232320 | Msa1466460 | 0.807658 | 4.538479e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232320 | MtrunA17_Chr2g0279121 | 92.348 | 379 | 10 | 2 | 1 | 376 | 1 | 363 | 0.0 | 695 |
| Msa0232320 | MtrunA17_Chr5g0402141 | 92.271 | 207 | 12 | 1 | 1 | 203 | 1 | 207 | 8.53e-133 | 378 |
| Msa0232320 | MtrunA17_Chr8g0369281 | 41.096 | 73 | 36 | 1 | 293 | 365 | 590 | 655 | 4.75e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0232320 | AT5G09390.1 | 52.332 | 386 | 130 | 14 | 3 | 373 | 2 | 348 | 2.30e-100 | 301 |
| Msa0232320 | AT5G09390.2 | 52.332 | 386 | 128 | 15 | 3 | 373 | 2 | 346 | 5.01e-98 | 295 |
| Msa0232320 | AT3G54230.3 | 50.877 | 57 | 28 | 0 | 309 | 365 | 291 | 347 | 5.77e-11 | 64.7 |
| Msa0232320 | AT3G54230.4 | 50.877 | 57 | 28 | 0 | 309 | 365 | 527 | 583 | 7.97e-11 | 64.3 |
| Msa0232320 | AT3G54230.5 | 50.877 | 57 | 28 | 0 | 309 | 365 | 571 | 627 | 8.59e-11 | 64.3 |
| Msa0232320 | AT3G54230.1 | 50.877 | 57 | 28 | 0 | 309 | 365 | 571 | 627 | 8.59e-11 | 64.3 |
| Msa0232320 | AT3G54230.2 | 50.877 | 57 | 28 | 0 | 309 | 365 | 572 | 628 | 8.59e-11 | 64.3 |
Find 99 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTCTGTAGAAGAATTAA+TGG | 0.205062 | 2_2:-4578754 | None:intergenic |
| TACATATTCAACAAAGTTTC+CGG | 0.210557 | 2_2:-4576891 | None:intergenic |
| GCAAGAGAAGAAGGCATATC+TGG | 0.245769 | 2_2:+4578630 | Msa0232320:CDS |
| GGTTGCTGAAGTTACATATA+AGG | 0.281505 | 2_2:+4575730 | Msa0232320:CDS |
| CTTCTTCCCTTTCTTTATCT+AGG | 0.286299 | 2_2:-4576853 | None:intergenic |
| CAAGGCTTGAGAAGGTTAAA+AGG | 0.290887 | 2_2:+4577809 | Msa0232320:CDS |
| ACATGCCCATCAACTCAAAT+TGG | 0.319252 | 2_2:-4580068 | None:intergenic |
| TGTAAGAGATAATGAGATTA+AGG | 0.321918 | 2_2:+4576910 | Msa0232320:CDS |
| CTTTATTGCTCTGCAGCATC+AGG | 0.330180 | 2_2:+4579141 | Msa0232320:CDS |
| TTCTCCACTATTACTTCAAC+TGG | 0.331421 | 2_2:-4575584 | None:intergenic |
| TTCAGATGGATATGAGAAAT+TGG | 0.332332 | 2_2:+4578602 | Msa0232320:CDS |
| TATTATTACAGCAGCAGTTT+GGG | 0.342926 | 2_2:+4579093 | Msa0232320:CDS |
| TGAGGATGCTATGAAGCTTA+TGG | 0.343326 | 2_2:+4577892 | Msa0232320:CDS |
| TATGTGTATGATGAATCTTC+TGG | 0.364127 | 2_2:+4578893 | Msa0232320:CDS |
| GCGGAATCGTCATTGTCTTC+AGG | 0.366680 | 2_2:-4575383 | None:intergenic |
| TTGCATCCAATTTGAGTTGA+TGG | 0.369030 | 2_2:+4580062 | Msa0232320:CDS |
| GAGGTTGATCCTAGATTTGC+TGG | 0.378178 | 2_2:+4577043 | Msa0232320:CDS |
| TATACAGAGCAAAGAGGGTT+AGG | 0.385882 | 2_2:+4575537 | Msa0232320:intron |
| GAGCTTATCAGTGACGAAAA+TGG | 0.396252 | 2_2:+4575695 | Msa0232320:CDS |
| TGAGTTGATGGGCATGTCTC+GGG | 0.400483 | 2_2:+4580074 | Msa0232320:exon |
| GGTTTCCCTTTCTTCCCCTT+CGG | 0.405507 | 2_2:-4575563 | None:intergenic |
| AACGTATAAGCATTAGTAAT+CGG | 0.415695 | 2_2:-4578564 | None:intergenic |
| GTATTATTACAGCAGCAGTT+TGG | 0.417915 | 2_2:+4579092 | Msa0232320:CDS |
| CGCTCTTTCGCAGCAACAGC+CGG | 0.424765 | 2_2:-4575644 | None:intergenic |
| GAACAGCCGCTTCTTCTCTC+TGG | 0.438435 | 2_2:+4575303 | Msa0232320:five_prime_UTR |
| CATCTTTAGAAGAAAGCTCT+TGG | 0.448194 | 2_2:-4577102 | None:intergenic |
| GAGCTTAATCCAGCAAATCT+AGG | 0.449387 | 2_2:-4577052 | None:intergenic |
| TTGAGTTGATGGGCATGTCT+CGG | 0.451684 | 2_2:+4580073 | Msa0232320:exon |
| GAGCAATAAAGCCCTGTACT+TGG | 0.453621 | 2_2:-4579129 | None:intergenic |
| TGTTTATCATGAACATAAAG+AGG | 0.460380 | 2_2:+4578109 | Msa0232320:CDS |
| CTTTCTTTATCTAGGTTGAA+AGG | 0.462334 | 2_2:-4576845 | None:intergenic |
| TGGAAGGAAGCTTCAATGTC+AGG | 0.463768 | 2_2:+4575323 | Msa0232320:exon |
| ATAGGACTTACTGTTTCCTC+TGG | 0.464957 | 2_2:-4577163 | None:intergenic |
| AACCTCATTAACTTCATCAT+AGG | 0.465828 | 2_2:-4580041 | None:intergenic |
| GCTCTGCAGCATCAGGGAAA+TGG | 0.470280 | 2_2:+4579148 | Msa0232320:CDS |
| CTTTCAACCTAGATAAAGAA+AGG | 0.472858 | 2_2:+4576846 | Msa0232320:CDS |
| TGTCAATGATTTGTCGAATC+CGG | 0.476844 | 2_2:+4575625 | Msa0232320:CDS |
| GAAACCAGTTGAAGTAATAG+TGG | 0.478435 | 2_2:+4575580 | Msa0232320:CDS |
| TATTATTATGATCCAAGTAC+AGG | 0.481651 | 2_2:+4579117 | Msa0232320:CDS |
| TACAATCTCTCTCTTTCAGA+TGG | 0.489410 | 2_2:+4578588 | Msa0232320:CDS |
| TGCATCCAATTTGAGTTGAT+GGG | 0.491551 | 2_2:+4580063 | Msa0232320:exon |
| AGGTTTCCGAAGGGGAAGAA+AGG | 0.492649 | 2_2:+4575557 | Msa0232320:CDS |
| ATGGATATGAGAAATTGGTC+AGG | 0.501327 | 2_2:+4578607 | Msa0232320:CDS |
| GGAGAAAGTAATTGCTGAGG+AGG | 0.501353 | 2_2:+4575601 | Msa0232320:CDS |
| ATATGTAACTTCAGCAACCT+TGG | 0.504625 | 2_2:-4575726 | None:intergenic |
| CTGCGAAAGAGCGGGTGAAA+CGG | 0.509628 | 2_2:+4575654 | Msa0232320:CDS |
| GGCTGTTGCTGCGAAAGAGC+GGG | 0.519946 | 2_2:+4575646 | Msa0232320:CDS |
| CTAGATAAAGAAAGGGAAGA+AGG | 0.521955 | 2_2:+4576854 | Msa0232320:CDS |
| TCATAGCATCCTCAGTTAGC+TGG | 0.523032 | 2_2:-4577883 | None:intergenic |
| TTGGTCAGGGCAAGAGAAGA+AGG | 0.529893 | 2_2:+4578621 | Msa0232320:CDS |
| AAGGATTCTTGCAGGATGCA+TGG | 0.531376 | 2_2:+4577008 | Msa0232320:intron |
| GCCATTAATTCTTCTACAGA+GGG | 0.535218 | 2_2:+4578753 | Msa0232320:CDS |
| CAGGAAGAGGGCGTTTGCCG+CGG | 0.535832 | 2_2:-4575364 | None:intergenic |
| ATGTGTATGATGAATCTTCT+GGG | 0.537005 | 2_2:+4578894 | Msa0232320:CDS |
| TCGTCATTGTCTTCAGGAAG+AGG | 0.538113 | 2_2:-4575377 | None:intergenic |
| CACCTATGATGAAGTTAATG+AGG | 0.540470 | 2_2:+4580039 | Msa0232320:CDS |
| TTTATTATACAGAGCAAAGA+GGG | 0.541213 | 2_2:+4575532 | Msa0232320:intron |
| GAGTTGATGGGCATGTCTCG+GGG | 0.545663 | 2_2:+4580075 | Msa0232320:exon |
| GGCAGCTTGTCCGTCATCAT+CGG | 0.546378 | 2_2:-4578679 | None:intergenic |
| TGCCATTAATTCTTCTACAG+AGG | 0.548389 | 2_2:+4578752 | Msa0232320:CDS |
| CAAGAGAAGAAGGCATATCT+GGG | 0.549609 | 2_2:+4578631 | Msa0232320:CDS |
| TTCATCTGTAGATGGCTTAG+CGG | 0.552180 | 2_2:-4578700 | None:intergenic |
| TTTCAACCTAGATAAAGAAA+GGG | 0.555045 | 2_2:+4576847 | Msa0232320:CDS |
| GAATTAATGGCATCTGATGA+TGG | 0.555391 | 2_2:-4578741 | None:intergenic |
| TTCCTTCCAGAGAGAAGAAG+CGG | 0.555600 | 2_2:-4575309 | None:intergenic |
| CGGCTGTTGCTGCGAAAGAG+CGG | 0.557075 | 2_2:+4575645 | Msa0232320:CDS |
| TGCAAATGTTCTTGAACCAG+AGG | 0.571637 | 2_2:+4577147 | Msa0232320:CDS |
| GCTATGAAGCTTATGGAGAA+TGG | 0.574184 | 2_2:+4577899 | Msa0232320:CDS |
| GGTTTCCGAAGGGGAAGAAA+GGG | 0.574562 | 2_2:+4575558 | Msa0232320:CDS |
| AGGTCTTACAAGGCTTGAGA+AGG | 0.577124 | 2_2:+4577801 | Msa0232320:intron |
| AAAGAGGGTTAGGTTTCCGA+AGG | 0.583233 | 2_2:+4575547 | Msa0232320:CDS |
| AGCCGCTTCTTCTCTCTGGA+AGG | 0.586242 | 2_2:+4575307 | Msa0232320:five_prime_UTR |
| TTGAGAAGGTTAAAAGGCAG+CGG | 0.601512 | 2_2:+4577815 | Msa0232320:CDS |
| AGAGCTTTCTTCTAAAGATG+TGG | 0.604642 | 2_2:+4577105 | Msa0232320:CDS |
| TGTAGCAACAAATGATGAAG+AGG | 0.604731 | 2_2:+4577075 | Msa0232320:CDS |
| GAAGGTTCATCTCGCAGCCG+CGG | 0.611291 | 2_2:+4575347 | Msa0232320:CDS |
| CGTCATTGTCTTCAGGAAGA+GGG | 0.611639 | 2_2:-4575376 | None:intergenic |
| CCACTGGAAGACAATGATTG+TGG | 0.612765 | 2_2:-4580123 | None:intergenic |
| GAAGCTTCAATGTCAGGTGA+AGG | 0.616621 | 2_2:+4575329 | Msa0232320:exon |
| TCTGTCTGTACATATGCCAC+TGG | 0.619741 | 2_2:-4580139 | None:intergenic |
| ATTTATTATACAGAGCAAAG+AGG | 0.622204 | 2_2:+4575531 | Msa0232320:intron |
| CCACAATCATTGTCTTCCAG+TGG | 0.625086 | 2_2:+4580123 | Msa0232320:three_prime_UTR |
| GATATGTTTGCCGATGATGA+CGG | 0.625638 | 2_2:+4578669 | Msa0232320:CDS |
| TTTATTGCTCTGCAGCATCA+GGG | 0.627159 | 2_2:+4579142 | Msa0232320:CDS |
| AGTGGAGAAAGTAATTGCTG+AGG | 0.631361 | 2_2:+4575598 | Msa0232320:CDS |
| AAGAGGGTTAGGTTTCCGAA+GGG | 0.638652 | 2_2:+4575548 | Msa0232320:CDS |
| AGCAACAAATGATGAAGAGG+AGG | 0.641378 | 2_2:+4577078 | Msa0232320:CDS |
| TGGATATGAGAAATTGGTCA+GGG | 0.642321 | 2_2:+4578608 | Msa0232320:CDS |
| AAGATGTGGCAATCATGAAG+AGG | 0.647170 | 2_2:+4577119 | Msa0232320:CDS |
| CGAAAATGGAGGTATCTCCA+AGG | 0.648366 | 2_2:+4575709 | Msa0232320:CDS |
| CGAAAGAGCGGGTGAAACGG+AGG | 0.652391 | 2_2:+4575657 | Msa0232320:CDS |
| ATTATTATGATCCAAGTACA+GGG | 0.656743 | 2_2:+4579118 | Msa0232320:CDS |
| TGTATTTGACCAGCTAACTG+AGG | 0.659418 | 2_2:+4577874 | Msa0232320:CDS |
| TGCATGGCTTGATAATGTTG+AGG | 0.660639 | 2_2:+4577024 | Msa0232320:CDS |
| AGAAGGCATATCTGGGAACA+CGG | 0.667646 | 2_2:+4578638 | Msa0232320:CDS |
| AGTTGATGGGCATGTCTCGG+GGG | 0.669047 | 2_2:+4580076 | Msa0232320:exon |
| CTTATCAGTGACGAAAATGG+AGG | 0.674964 | 2_2:+4575698 | Msa0232320:CDS |
| AGAGGGTTAGGTTTCCGAAG+GGG | 0.676923 | 2_2:+4575549 | Msa0232320:CDS |
| TTTCAGCTTCTACACAGACG+AGG | 0.692973 | 2_2:-4575275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTCATAATAATAAATAA+TGG | - | chr2_2:4575468-4575487 | None:intergenic | 10.0% |
| !!! | TTATTTTCAAAAAAAGTATA+CGG | - | chr2_2:4578933-4578952 | None:intergenic | 10.0% |
| !!! | TTTTCTTTATATTATAGATT+AGG | + | chr2_2:4579734-4579753 | Msa0232320:intron | 10.0% |
| !!! | TAAATAATGGAATCAAATTA+GGG | - | chr2_2:4575455-4575474 | None:intergenic | 15.0% |
| !!! | ATAAATAATGGAATCAAATT+AGG | - | chr2_2:4575456-4575475 | None:intergenic | 15.0% |
| !!! | GTTTGTTTTTTTTGTATTTT+AGG | + | chr2_2:4575752-4575771 | Msa0232320:intron | 15.0% |
| !! | GTTATAAGAATATACTTATA+TGG | + | chr2_2:4576223-4576242 | Msa0232320:intron | 15.0% |
| !!! | CAACAAATACAAATTATTTT+AGG | - | chr2_2:4576581-4576600 | None:intergenic | 15.0% |
| !!! | AATAATTTGTATTTGTTGTA+TGG | + | chr2_2:4576583-4576602 | Msa0232320:intron | 15.0% |
| !! | ATTCAATTAATAAGTTGTTA+AGG | + | chr2_2:4576989-4577008 | Msa0232320:intron | 15.0% |
| !!! | CCTTTATTTTAAAGAAAATT+TGG | - | chr2_2:4577580-4577599 | None:intergenic | 15.0% |
| !!! | CCAAATTTTCTTTAAAATAA+AGG | + | chr2_2:4577577-4577596 | Msa0232320:intron | 15.0% |
| !! | ACATAATAAAAATAAAGCAA+AGG | - | chr2_2:4578172-4578191 | None:intergenic | 15.0% |
| !! | AATTATGTCATTAAAATACA+TGG | - | chr2_2:4578300-4578319 | None:intergenic | 15.0% |
| !!! | TAAGTTTTGTAAGACTATTT+TGG | - | chr2_2:4576013-4576032 | None:intergenic | 20.0% |
| !! | AATAAACCAATTCATCAAAT+AGG | + | chr2_2:4576051-4576070 | Msa0232320:intron | 20.0% |
| !! | GAATACATTATTTGAACAAA+TGG | + | chr2_2:4576114-4576133 | Msa0232320:intron | 20.0% |
| !! | TTTGAACAAATGGATAAAAA+AGG | + | chr2_2:4576124-4576143 | Msa0232320:intron | 20.0% |
| !! | TTGAACAAATGGATAAAAAA+GGG | + | chr2_2:4576125-4576144 | Msa0232320:intron | 20.0% |
| !!! | TTGTAACATTTTTCTGTTAA+TGG | + | chr2_2:4576172-4576191 | Msa0232320:intron | 20.0% |
| !!! | GTTTCTCTTATAGTAATTTT+AGG | - | chr2_2:4576298-4576317 | None:intergenic | 20.0% |
| !! | TGAATCAAATGATAAAACAT+AGG | - | chr2_2:4577184-4577203 | None:intergenic | 20.0% |
| !! | TTATCATTTGATTCATTCTT+AGG | + | chr2_2:4577189-4577208 | Msa0232320:intron | 20.0% |
| !! | AATTTGTAATTAGTGACAAT+AGG | + | chr2_2:4577243-4577262 | Msa0232320:intron | 20.0% |
| !!! | AAACCTTTAAATTGTTCTTT+TGG | + | chr2_2:4577300-4577319 | Msa0232320:intron | 20.0% |
| !! | TTACCAAAAGAACAATTTAA+AGG | - | chr2_2:4577306-4577325 | None:intergenic | 20.0% |
| !! | GATAACCTTTAAACATTTAT+TGG | + | chr2_2:4577343-4577362 | Msa0232320:intron | 20.0% |
| !! | ACTAACCAATAAATGTTTAA+AGG | - | chr2_2:4577351-4577370 | None:intergenic | 20.0% |
| !!! | AAATTTCCCTTTTTGATTTT+CGG | - | chr2_2:4577428-4577447 | None:intergenic | 20.0% |
| !!! | GTACATACTTATTTTGTTAA+GGG | + | chr2_2:4577730-4577749 | Msa0232320:intron | 20.0% |
| !!! | TAATTGATATCTTTTCCAAT+AGG | + | chr2_2:4577781-4577800 | Msa0232320:intron | 20.0% |
| !! | GTCACAAAACATAAAAATAA+AGG | - | chr2_2:4578213-4578232 | None:intergenic | 20.0% |
| !!! | TTTTCTTATTATAACACTGA+TGG | - | chr2_2:4578379-4578398 | None:intergenic | 20.0% |
| !! | TCATCTTTAATGTCTTTAAT+CGG | + | chr2_2:4578832-4578851 | Msa0232320:intron | 20.0% |
| !!! | CTTTTACATCATTAAATCAT+AGG | - | chr2_2:4578979-4578998 | None:intergenic | 20.0% |
| !!! | TTTACTTTAAGTTTGATCTT+GGG | + | chr2_2:4579363-4579382 | Msa0232320:intron | 20.0% |
| !!! | ATAGACAATGCTATTTTTAT+AGG | + | chr2_2:4579591-4579610 | Msa0232320:intron | 20.0% |
| !!! | GTTTATTTTTGTTTAAACAC+AGG | + | chr2_2:4579993-4580012 | Msa0232320:intron | 20.0% |
| !!! | GCAGAAATAAATTTGAAATT+TGG | - | chr2_2:4580375-4580394 | None:intergenic | 20.0% |
| ! | AAGAAGAAGAAGAAGAATTA+CGG | - | chr2_2:4575419-4575438 | None:intergenic | 25.0% |
| ! | ATTTATTATACAGAGCAAAG+AGG | + | chr2_2:4575531-4575550 | Msa0232320:intron | 25.0% |
| ! | TTTATTATACAGAGCAAAGA+GGG | + | chr2_2:4575532-4575551 | Msa0232320:intron | 25.0% |
| !!! | GTTTTTGTGTTGATAGATAA+TGG | + | chr2_2:4575786-4575805 | Msa0232320:intron | 25.0% |
| !! | ACCATGATTCTTTTGTAAAT+TGG | + | chr2_2:4576690-4576709 | Msa0232320:intron | 25.0% |
| ! | TTTCAACCTAGATAAAGAAA+GGG | + | chr2_2:4576847-4576866 | Msa0232320:CDS | 25.0% |
| ! | TACATATTCAACAAAGTTTC+CGG | - | chr2_2:4576894-4576913 | None:intergenic | 25.0% |
| ! | TGTAAGAGATAATGAGATTA+AGG | + | chr2_2:4576910-4576929 | Msa0232320:CDS | 25.0% |
| !!! | CGTACATACTTATTTTGTTA+AGG | + | chr2_2:4577729-4577748 | Msa0232320:intron | 25.0% |
| ! | TGTTTATCATGAACATAAAG+AGG | + | chr2_2:4578109-4578128 | Msa0232320:CDS | 25.0% |
| ! | TTATTATAACACTGATGGTA+CGG | - | chr2_2:4578374-4578393 | None:intergenic | 25.0% |
| ! | TATCAACGTATAGATTTACA+AGG | + | chr2_2:4578502-4578521 | Msa0232320:intron | 25.0% |
| ! | AACGTATAAGCATTAGTAAT+CGG | - | chr2_2:4578567-4578586 | None:intergenic | 25.0% |
| ! | TATTATTATGATCCAAGTAC+AGG | + | chr2_2:4579117-4579136 | Msa0232320:CDS | 25.0% |
| ! | ATTATTATGATCCAAGTACA+GGG | + | chr2_2:4579118-4579137 | Msa0232320:CDS | 25.0% |
| ! | TTTAAATCCTAAACCTATTC+TGG | + | chr2_2:4579285-4579304 | Msa0232320:intron | 25.0% |
| ! | AATATCTATCTAACCAGAAT+AGG | - | chr2_2:4579301-4579320 | None:intergenic | 25.0% |
| ! | TACAAATAATGCATGTTTCT+AGG | - | chr2_2:4579342-4579361 | None:intergenic | 25.0% |
| !! | CTTTACTTTAAGTTTGATCT+TGG | + | chr2_2:4579362-4579381 | Msa0232320:intron | 25.0% |
| !!! | GAATTTTTGGTATTTCATGT+TGG | + | chr2_2:4579683-4579702 | Msa0232320:intron | 25.0% |
| ! | ATACAACATTAAACTCTAGA+GGG | - | chr2_2:4579808-4579827 | None:intergenic | 25.0% |
| ! | AATACAACATTAAACTCTAG+AGG | - | chr2_2:4579809-4579828 | None:intergenic | 25.0% |
| ! | AGTTTAATGTTGTATTTCCT+GGG | + | chr2_2:4579813-4579832 | Msa0232320:intron | 25.0% |
| !! | TATTTTCTGCATTTAGTGAT+CGG | + | chr2_2:4579917-4579936 | Msa0232320:intron | 25.0% |
| !! | AAAGAGTATGTGTGTTATAA+AGG | - | chr2_2:4580239-4580258 | None:intergenic | 25.0% |
| !! | AATTGGATAGCTGTTTATTT+TGG | + | chr2_2:4580401-4580420 | Msa0232320:intron | 25.0% |
| !!! | TGACTAGCTTGAAAAAAAAA+AGG | - | chr2_2:4580477-4580496 | None:intergenic | 25.0% |
| AGTCTTACAAAACTTATGTC+AGG | + | chr2_2:4576017-4576036 | Msa0232320:intron | 30.0% | |
| GTCTTACAAAACTTATGTCA+GGG | + | chr2_2:4576018-4576037 | Msa0232320:intron | 30.0% | |
| TCTTACAAAACTTATGTCAG+GGG | + | chr2_2:4576019-4576038 | Msa0232320:intron | 30.0% | |
| ! | AATCTCATGTTCTGAACATT+GGG | - | chr2_2:4576077-4576096 | None:intergenic | 30.0% |
| ! | AAATCTCATGTTCTGAACAT+TGG | - | chr2_2:4576078-4576097 | None:intergenic | 30.0% |
| !! | GAATTAAGAATGTTCTAGAG+TGG | + | chr2_2:4576194-4576213 | Msa0232320:intron | 30.0% |
| TATCAACAAGCTGTATACAA+TGG | - | chr2_2:4576481-4576500 | None:intergenic | 30.0% | |
| GGTTGGAACATTTCATTAAT+TGG | + | chr2_2:4576521-4576540 | Msa0232320:intron | 30.0% | |
| TTTCATTAATTGGCAATGCT+TGG | + | chr2_2:4576531-4576550 | Msa0232320:intron | 30.0% | |
| GCCAATTTACAAAAGAATCA+TGG | - | chr2_2:4576694-4576713 | None:intergenic | 30.0% | |
| TGTTCAAATGAACATGTCAT+TGG | + | chr2_2:4576733-4576752 | Msa0232320:intron | 30.0% | |
| GTTCAAATGAACATGTCATT+GGG | + | chr2_2:4576734-4576753 | Msa0232320:intron | 30.0% | |
| ATGTCATTGGGTTCATATTA+TGG | + | chr2_2:4576746-4576765 | Msa0232320:intron | 30.0% | |
| ATTGGGTTCATATTATGGAT+AGG | + | chr2_2:4576751-4576770 | Msa0232320:intron | 30.0% | |
| AGCAGATTAATAATGTGTGT+TGG | + | chr2_2:4576780-4576799 | Msa0232320:intron | 30.0% | |
| ! | GGAAAATGAGAATTTTGTTG+AGG | + | chr2_2:4576805-4576824 | Msa0232320:intron | 30.0% |
| ! | AATGAGAATTTTGTTGAGGA+CGG | + | chr2_2:4576809-4576828 | Msa0232320:CDS | 30.0% |
| ! | CTTTCTTTATCTAGGTTGAA+AGG | - | chr2_2:4576848-4576867 | None:intergenic | 30.0% |
| CTTTCAACCTAGATAAAGAA+AGG | + | chr2_2:4576846-4576865 | Msa0232320:CDS | 30.0% | |
| ! | GAACAATTTAAAGGTTTGCT+TGG | - | chr2_2:4577297-4577316 | None:intergenic | 30.0% |
| ! | TCTTTTGGTAAACATTGTTG+AGG | + | chr2_2:4577315-4577334 | Msa0232320:intron | 30.0% |
| ! | CTTTTGGTAAACATTGTTGA+GGG | + | chr2_2:4577316-4577335 | Msa0232320:intron | 30.0% |
| TCCTCTTAATGTGTAAAGAA+TGG | + | chr2_2:4577374-4577393 | Msa0232320:intron | 30.0% | |
| CCTCTTAATGTGTAAAGAAT+GGG | + | chr2_2:4577375-4577394 | Msa0232320:intron | 30.0% | |
| !!! | AGAATGGGTAATTTTGAAGT+TGG | + | chr2_2:4577390-4577409 | Msa0232320:intron | 30.0% |
| !!! | GTAATTTTGAAGTTGGAACT+AGG | + | chr2_2:4577397-4577416 | Msa0232320:intron | 30.0% |
| !! | TTTGCTGTTAATTCCATAGT+AGG | + | chr2_2:4577445-4577464 | Msa0232320:intron | 30.0% |
| GAGAAAAACAGTTACATGTA+AGG | - | chr2_2:4577491-4577510 | None:intergenic | 30.0% | |
| TGTAGGAAGTTATATTAGCT+TGG | + | chr2_2:4577614-4577633 | Msa0232320:intron | 30.0% | |
| TCAACTAAAGTGATTTCCAA+TGG | - | chr2_2:4577697-4577716 | None:intergenic | 30.0% | |
| TTGGAAATCACTTTAGTTGA+CGG | + | chr2_2:4577697-4577716 | Msa0232320:intron | 30.0% | |
| ! | ATTTTGTTAAGGGATGTTGA+AGG | + | chr2_2:4577740-4577759 | Msa0232320:intron | 30.0% |
| GATAGAAAGACAAAAATGTC+TGG | + | chr2_2:4577839-4577858 | Msa0232320:CDS | 30.0% | |
| TTCAGTTAAGTCATTCTCAT+TGG | + | chr2_2:4577926-4577945 | Msa0232320:intron | 30.0% | |
| TCAGTTAAGTCATTCTCATT+GGG | + | chr2_2:4577927-4577946 | Msa0232320:intron | 30.0% | |
| ATAAATACATGTCTTAGCCA+TGG | - | chr2_2:4577968-4577987 | None:intergenic | 30.0% | |
| TATTTATTATGACAGCCTGA+TGG | + | chr2_2:4577981-4578000 | Msa0232320:intron | 30.0% | |
| TACCACATGATGCTTAATAT+TGG | + | chr2_2:4578051-4578070 | Msa0232320:intron | 30.0% | |
| ! | GAGTTACTTTATTAACACGA+TGG | + | chr2_2:4578248-4578267 | Msa0232320:intron | 30.0% |
| TAATTCTATTCCACTTGTGT+TGG | + | chr2_2:4578315-4578334 | Msa0232320:intron | 30.0% | |
| ! | AAGTTTAAAGCTTAATGCGA+TGG | - | chr2_2:4578414-4578433 | None:intergenic | 30.0% |
| !! | TCGCATTAAGCTTTAAACTT+AGG | + | chr2_2:4578414-4578433 | Msa0232320:intron | 30.0% |
| !! | CGCATTAAGCTTTAAACTTA+GGG | + | chr2_2:4578415-4578434 | Msa0232320:intron | 30.0% |
| !! | GCATTAAGCTTTAAACTTAG+GGG | + | chr2_2:4578416-4578435 | Msa0232320:intron | 30.0% |
| ATTGAGATTAAATAATGCCC+AGG | - | chr2_2:4578450-4578469 | None:intergenic | 30.0% | |
| TACGTTGATACCATTATTCA+TGG | - | chr2_2:4578492-4578511 | None:intergenic | 30.0% | |
| TTCAGATGGATATGAGAAAT+TGG | + | chr2_2:4578602-4578621 | Msa0232320:CDS | 30.0% | |
| ! | GCATTATTTTCATCTGTAGA+TGG | - | chr2_2:4578711-4578730 | None:intergenic | 30.0% |
| AAACATTGCCTCTATAACTT+TGG | + | chr2_2:4578779-4578798 | Msa0232320:intron | 30.0% | |
| TATAACTTTGGCATCTGAAA+TGG | + | chr2_2:4578791-4578810 | Msa0232320:intron | 30.0% | |
| TATGTGTATGATGAATCTTC+TGG | + | chr2_2:4578893-4578912 | Msa0232320:CDS | 30.0% | |
| ATGTGTATGATGAATCTTCT+GGG | + | chr2_2:4578894-4578913 | Msa0232320:CDS | 30.0% | |
| ATCTGACATCAGTTGTTTAT+TGG | + | chr2_2:4579064-4579083 | Msa0232320:intron | 30.0% | |
| TATTATTACAGCAGCAGTTT+GGG | + | chr2_2:4579093-4579112 | Msa0232320:CDS | 30.0% | |
| TATCTAACCAGAATAGGTTT+AGG | - | chr2_2:4579295-4579314 | None:intergenic | 30.0% | |
| AAGAATATGCCAATAGTTAG+AGG | + | chr2_2:4579434-4579453 | Msa0232320:intron | 30.0% | |
| AGAATATGCCAATAGTTAGA+GGG | + | chr2_2:4579435-4579454 | Msa0232320:intron | 30.0% | |
| ! | TAGTAGGACATTTTTCCATT+AGG | - | chr2_2:4579549-4579568 | None:intergenic | 30.0% |
| TACTCGTTTATCTATAACTC+AGG | + | chr2_2:4579655-4579674 | Msa0232320:intron | 30.0% | |
| ! | TTTTGGTATTTCATGTTGGA+TGG | + | chr2_2:4579687-4579706 | Msa0232320:intron | 30.0% |
| GAGTTTAATGTTGTATTTCC+TGG | + | chr2_2:4579812-4579831 | Msa0232320:intron | 30.0% | |
| AAACTATACAGATACTACTC+AGG | - | chr2_2:4579898-4579917 | None:intergenic | 30.0% | |
| AGACAATTATCATTAAGACC+AGG | - | chr2_2:4579949-4579968 | None:intergenic | 30.0% | |
| AACCTCATTAACTTCATCAT+AGG | - | chr2_2:4580044-4580063 | None:intergenic | 30.0% | |
| !! | TTTATTTCTGCTTGTGCAAT+TGG | + | chr2_2:4580384-4580403 | Msa0232320:intron | 30.0% |
| !!! | TTTATTTTGGCGCCAAATTT+AGG | + | chr2_2:4580414-4580433 | Msa0232320:intron | 30.0% |
| CATTAGTAACGTCCTAAATT+TGG | - | chr2_2:4580429-4580448 | None:intergenic | 30.0% | |
| !! | GAAGAATTACGGTGGATTTT+TGG | - | chr2_2:4575408-4575427 | None:intergenic | 35.0% |
| AAGAAGAAGAAGAATTACGG+TGG | - | chr2_2:4575416-4575435 | None:intergenic | 35.0% | |
| GAAACCAGTTGAAGTAATAG+TGG | + | chr2_2:4575580-4575599 | Msa0232320:CDS | 35.0% | |
| TTCTCCACTATTACTTCAAC+TGG | - | chr2_2:4575587-4575606 | None:intergenic | 35.0% | |
| ! | TGTCAATGATTTGTCGAATC+CGG | + | chr2_2:4575625-4575644 | Msa0232320:CDS | 35.0% |
| ! | ATTTTCGTCACTGATAAGCT+CGG | - | chr2_2:4575696-4575715 | None:intergenic | 35.0% |
| ATATGTAACTTCAGCAACCT+TGG | - | chr2_2:4575729-4575748 | None:intergenic | 35.0% | |
| GGTTGCTGAAGTTACATATA+AGG | + | chr2_2:4575730-4575749 | Msa0232320:CDS | 35.0% | |
| ATTGGGCCTATTTGATGAAT+TGG | - | chr2_2:4576060-4576079 | None:intergenic | 35.0% | |
| !! | ATAAAAAAGGGTACTGTGAG+TGG | + | chr2_2:4576137-4576156 | Msa0232320:intron | 35.0% |
| TACTTATATGGTGTACGAGA+TGG | + | chr2_2:4576235-4576254 | Msa0232320:intron | 35.0% | |
| ! | ATATTCCAGTTTTCAGCACT+TGG | + | chr2_2:4576500-4576519 | Msa0232320:intron | 35.0% |
| ! | GTTGTATGGAGTGTTTGTAA+TGG | + | chr2_2:4576597-4576616 | Msa0232320:intron | 35.0% |
| ! | GATTAATAATGTGTGTTGGC+AGG | + | chr2_2:4576784-4576803 | Msa0232320:intron | 35.0% |
| ! | ATGAGAATTTTGTTGAGGAC+GGG | + | chr2_2:4576810-4576829 | Msa0232320:CDS | 35.0% |
| CTTCTTCCCTTTCTTTATCT+AGG | - | chr2_2:4576856-4576875 | None:intergenic | 35.0% | |
| CTAGATAAAGAAAGGGAAGA+AGG | + | chr2_2:4576854-4576873 | Msa0232320:CDS | 35.0% | |
| !!! | GAAGGTTATTTTGATGCATC+CGG | + | chr2_2:4576872-4576891 | Msa0232320:CDS | 35.0% |
| GAGATAATGAGATTAAGGTG+AGG | + | chr2_2:4576915-4576934 | Msa0232320:intron | 35.0% | |
| AAGTTGTTAAGGATTCTTGC+AGG | + | chr2_2:4577000-4577019 | Msa0232320:intron | 35.0% | |
| TGTAGCAACAAATGATGAAG+AGG | + | chr2_2:4577075-4577094 | Msa0232320:CDS | 35.0% | |
| ! | CATCTTTAGAAGAAAGCTCT+TGG | - | chr2_2:4577105-4577124 | None:intergenic | 35.0% |
| ! | AGAGCTTTCTTCTAAAGATG+TGG | + | chr2_2:4577105-4577124 | Msa0232320:CDS | 35.0% |
| CCCATTCTTTACACATTAAG+AGG | - | chr2_2:4577378-4577397 | None:intergenic | 35.0% | |
| GAACTGCCGAAAATCAAAAA+GGG | + | chr2_2:4577419-4577438 | Msa0232320:intron | 35.0% | |
| TAACAGAGAATAGCCTACTA+TGG | - | chr2_2:4577461-4577480 | None:intergenic | 35.0% | |
| ! | TTTTTCTCAACCAACCATGA+GGG | - | chr2_2:4577515-4577534 | None:intergenic | 35.0% |
| GTTGAGAAAAACCAGGTAAT+CGG | + | chr2_2:4577524-4577543 | Msa0232320:intron | 35.0% | |
| ! | ATCCCCAATTTGGCTTAAAA+AGG | + | chr2_2:4577549-4577568 | Msa0232320:intron | 35.0% |
| ! | TCCCCAATTTGGCTTAAAAA+GGG | + | chr2_2:4577550-4577569 | Msa0232320:intron | 35.0% |
| !! | AGGAAGCAAAGTATTGTTGT+AGG | + | chr2_2:4577597-4577616 | Msa0232320:intron | 35.0% |
| TTCTCTTAAAGTCTTGCCAT+TGG | + | chr2_2:4577678-4577697 | Msa0232320:intron | 35.0% | |
| ! | CTTTTCCAATAGGTCTTACA+AGG | + | chr2_2:4577791-4577810 | Msa0232320:intron | 35.0% |
| AGCCAATATTAAGCATCATG+TGG | - | chr2_2:4578056-4578075 | None:intergenic | 35.0% | |
| ATTAACACGATGGAATATGC+TGG | + | chr2_2:4578258-4578277 | Msa0232320:intron | 35.0% | |
| ! | TTCCACTTGTGTTGGTATTA+TGG | + | chr2_2:4578323-4578342 | Msa0232320:intron | 35.0% |
| ! | ACTTGTGTTGGTATTATGGT+CGG | + | chr2_2:4578327-4578346 | Msa0232320:intron | 35.0% |
| GTCTCATCTTCCATGAATAA+TGG | + | chr2_2:4578479-4578498 | Msa0232320:intron | 35.0% | |
| TTTACAAGGACTGAAAAGCA+AGG | + | chr2_2:4578516-4578535 | Msa0232320:intron | 35.0% | |
| !! | GGAATGGTACATGTTTTTGT+AGG | + | chr2_2:4578537-4578556 | Msa0232320:intron | 35.0% |
| TACAATCTCTCTCTTTCAGA+TGG | + | chr2_2:4578588-4578607 | Msa0232320:CDS | 35.0% | |
| ATGGATATGAGAAATTGGTC+AGG | + | chr2_2:4578607-4578626 | Msa0232320:CDS | 35.0% | |
| TGGATATGAGAAATTGGTCA+GGG | + | chr2_2:4578608-4578627 | Msa0232320:CDS | 35.0% | |
| GAATTAATGGCATCTGATGA+TGG | - | chr2_2:4578744-4578763 | None:intergenic | 35.0% | |
| TGCCATTAATTCTTCTACAG+AGG | + | chr2_2:4578752-4578771 | Msa0232320:CDS | 35.0% | |
| GCCATTAATTCTTCTACAGA+GGG | + | chr2_2:4578753-4578772 | Msa0232320:CDS | 35.0% | |
| ACCCTCTGTAGAAGAATTAA+TGG | - | chr2_2:4578757-4578776 | None:intergenic | 35.0% | |
| TTCAGATGCCAAAGTTATAG+AGG | - | chr2_2:4578790-4578809 | None:intergenic | 35.0% | |
| GTATTATTACAGCAGCAGTT+TGG | + | chr2_2:4579092-4579111 | Msa0232320:CDS | 35.0% | |
| ACACATGACTAAGATGAATC+AGG | - | chr2_2:4579185-4579204 | None:intergenic | 35.0% | |
| AGGCATGTTGATGTTTAAGA+AGG | - | chr2_2:4579244-4579263 | None:intergenic | 35.0% | |
| AGCAAAGAACTCACATCTAA+AGG | - | chr2_2:4579264-4579283 | None:intergenic | 35.0% | |
| AATCTTCTCCCTCTAACTAT+TGG | - | chr2_2:4579446-4579465 | None:intergenic | 35.0% | |
| ! | ATTTTTCCATTAGGTAGGGT+TGG | - | chr2_2:4579540-4579559 | None:intergenic | 35.0% |
| ! | GGACATTTTTCCATTAGGTA+GGG | - | chr2_2:4579544-4579563 | None:intergenic | 35.0% |
| ! | AGGACATTTTTCCATTAGGT+AGG | - | chr2_2:4579545-4579564 | None:intergenic | 35.0% |
| ! | AACTCAGGCTCTTGAATTTT+TGG | + | chr2_2:4579670-4579689 | Msa0232320:intron | 35.0% |
| ATGGATCTTGTTAAAGTAGC+TGG | + | chr2_2:4579706-4579725 | Msa0232320:intron | 35.0% | |
| CACCTATGATGAAGTTAATG+AGG | + | chr2_2:4580039-4580058 | Msa0232320:CDS | 35.0% | |
| !! | TTGCATCCAATTTGAGTTGA+TGG | + | chr2_2:4580062-4580081 | Msa0232320:CDS | 35.0% |
| !! | TGCATCCAATTTGAGTTGAT+GGG | + | chr2_2:4580063-4580082 | Msa0232320:exon | 35.0% |
| ! | CCTAAACAAGTAGAAAGTGT+GGG | - | chr2_2:4580190-4580209 | None:intergenic | 35.0% |
| ACCTAAACAAGTAGAAAGTG+TGG | - | chr2_2:4580191-4580210 | None:intergenic | 35.0% | |
| TCAACACAGAAACATGCTAT+TGG | - | chr2_2:4580275-4580294 | None:intergenic | 35.0% | |
| !! | GAATTACGGTGGATTTTTGG+CGG | - | chr2_2:4575405-4575424 | None:intergenic | 40.0% |
| TATACAGAGCAAAGAGGGTT+AGG | + | chr2_2:4575537-4575556 | Msa0232320:intron | 40.0% | |
| AGTGGAGAAAGTAATTGCTG+AGG | + | chr2_2:4575598-4575617 | Msa0232320:CDS | 40.0% | |
| GAGCTTATCAGTGACGAAAA+TGG | + | chr2_2:4575695-4575714 | Msa0232320:CDS | 40.0% | |
| CTTATCAGTGACGAAAATGG+AGG | + | chr2_2:4575698-4575717 | Msa0232320:CDS | 40.0% | |
| TATATGGTGTACGAGATGGA+AGG | + | chr2_2:4576239-4576258 | Msa0232320:intron | 40.0% | |
| CAGTCAAATCACTACACTAG+AGG | + | chr2_2:4576262-4576281 | Msa0232320:intron | 40.0% | |
| ACTACACTAGAGGTAGAGTA+AGG | + | chr2_2:4576272-4576291 | Msa0232320:intron | 40.0% | |
| GTTATACCACTAAGCAGGAT+CGG | - | chr2_2:4576400-4576419 | None:intergenic | 40.0% | |
| TCCTGCTTAGTGGTATAACA+TGG | + | chr2_2:4576401-4576420 | Msa0232320:intron | 40.0% | |
| CTTAGTGGTATAACATGGCT+TGG | + | chr2_2:4576406-4576425 | Msa0232320:intron | 40.0% | |
| !! | TGTTGCACTTTGCTGTTACT+TGG | + | chr2_2:4576440-4576459 | Msa0232320:intron | 40.0% |
| !! | GTTGCACTTTGCTGTTACTT+GGG | + | chr2_2:4576441-4576460 | Msa0232320:intron | 40.0% |
| ! | TTGTGAAGTTTAGAGCCAGT+TGG | + | chr2_2:4576644-4576663 | Msa0232320:intron | 40.0% |
| ! | TGTGAAGTTTAGAGCCAGTT+GGG | + | chr2_2:4576645-4576664 | Msa0232320:intron | 40.0% |
| GCATTTGAACTAAACCCAAC+TGG | - | chr2_2:4576662-4576681 | None:intergenic | 40.0% | |
| GGTTCATATTATGGATAGGC+AGG | + | chr2_2:4576755-4576774 | Msa0232320:intron | 40.0% | |
| !! | TGCATGGCTTGATAATGTTG+AGG | + | chr2_2:4577024-4577043 | Msa0232320:CDS | 40.0% |
| GAGCTTAATCCAGCAAATCT+AGG | - | chr2_2:4577055-4577074 | None:intergenic | 40.0% | |
| AGCAACAAATGATGAAGAGG+AGG | + | chr2_2:4577078-4577097 | Msa0232320:CDS | 40.0% | |
| AAGATGTGGCAATCATGAAG+AGG | + | chr2_2:4577119-4577138 | Msa0232320:CDS | 40.0% | |
| TGCAAATGTTCTTGAACCAG+AGG | + | chr2_2:4577147-4577166 | Msa0232320:CDS | 40.0% | |
| ATAGGACTTACTGTTTCCTC+TGG | - | chr2_2:4577166-4577185 | None:intergenic | 40.0% | |
| GGAACTGCCGAAAATCAAAA+AGG | + | chr2_2:4577418-4577437 | Msa0232320:intron | 40.0% | |
| !! | AACTGTTTTTCTCTCCCTCA+TGG | + | chr2_2:4577498-4577517 | Msa0232320:intron | 40.0% |
| ! | GTTTTTCTCAACCAACCATG+AGG | - | chr2_2:4577516-4577535 | None:intergenic | 40.0% |
| ! | ATGGTTGGTTGAGAAAAACC+AGG | + | chr2_2:4577517-4577536 | Msa0232320:intron | 40.0% |
| GTAATCGGTAATCCCCAATT+TGG | + | chr2_2:4577539-4577558 | Msa0232320:intron | 40.0% | |
| !! | CCCCTTTTTAAGCCAAATTG+GGG | - | chr2_2:4577554-4577573 | None:intergenic | 40.0% |
| ! | CCCCAATTTGGCTTAAAAAG+GGG | + | chr2_2:4577551-4577570 | Msa0232320:intron | 40.0% |
| !! | CCCCCTTTTTAAGCCAAATT+GGG | - | chr2_2:4577555-4577574 | None:intergenic | 40.0% |
| ! | CCCAATTTGGCTTAAAAAGG+GGG | + | chr2_2:4577552-4577571 | Msa0232320:intron | 40.0% |
| !! | ACCCCCTTTTTAAGCCAAAT+TGG | - | chr2_2:4577556-4577575 | None:intergenic | 40.0% |
| GGATGTTGAAGGTCATTTGT+TGG | + | chr2_2:4577751-4577770 | Msa0232320:intron | 40.0% | |
| ! | TCAAGCCTTGTAAGACCTAT+TGG | - | chr2_2:4577799-4577818 | None:intergenic | 40.0% |
| CAAGGCTTGAGAAGGTTAAA+AGG | + | chr2_2:4577809-4577828 | Msa0232320:CDS | 40.0% | |
| TTGAGAAGGTTAAAAGGCAG+CGG | + | chr2_2:4577815-4577834 | Msa0232320:CDS | 40.0% | |
| TGTATTTGACCAGCTAACTG+AGG | + | chr2_2:4577874-4577893 | Msa0232320:CDS | 40.0% | |
| TGAGGATGCTATGAAGCTTA+TGG | + | chr2_2:4577892-4577911 | Msa0232320:CDS | 40.0% | |
| GCTATGAAGCTTATGGAGAA+TGG | + | chr2_2:4577899-4577918 | Msa0232320:CDS | 40.0% | |
| ! | GGCTTTGTAGATATTGTCCA+TGG | + | chr2_2:4577948-4577967 | Msa0232320:intron | 40.0% |
| GACCATAATACCAACACAAG+TGG | - | chr2_2:4578328-4578347 | None:intergenic | 40.0% | |
| ! | CTTGTGTTGGTATTATGGTC+GGG | + | chr2_2:4578328-4578347 | Msa0232320:intron | 40.0% |
| ! | GCTTTAAACTTAGGGGAAGT+TGG | + | chr2_2:4578423-4578442 | Msa0232320:intron | 40.0% |
| AAGGACTGAAAAGCAAGGAA+TGG | + | chr2_2:4578521-4578540 | Msa0232320:intron | 40.0% | |
| ! | CAAGAGAAGAAGGCATATCT+GGG | + | chr2_2:4578631-4578650 | Msa0232320:CDS | 40.0% |
| GATATGTTTGCCGATGATGA+CGG | + | chr2_2:4578669-4578688 | Msa0232320:CDS | 40.0% | |
| TTCATCTGTAGATGGCTTAG+CGG | - | chr2_2:4578703-4578722 | None:intergenic | 40.0% | |
| !! | TCGGTTCTACTTTTCTTTCC+AGG | + | chr2_2:4578851-4578870 | Msa0232320:intron | 40.0% |
| !! | GTTCTACTTTTCTTTCCAGG+CGG | + | chr2_2:4578854-4578873 | Msa0232320:intron | 40.0% |
| CATCAGTTGTTTATTGGTCC+AGG | + | chr2_2:4579070-4579089 | Msa0232320:intron | 40.0% | |
| ACTGCTGCTGTAATAATACC+TGG | - | chr2_2:4579091-4579110 | None:intergenic | 40.0% | |
| TTTATTGCTCTGCAGCATCA+GGG | + | chr2_2:4579142-4579161 | Msa0232320:CDS | 40.0% | |
| AGACTATGTCTCGTTCTCAA+TGG | - | chr2_2:4579489-4579508 | None:intergenic | 40.0% | |
| ! | GGTTGGCTAAATGTGTCAAA+AGG | - | chr2_2:4579523-4579542 | None:intergenic | 40.0% |
| ATTTAGCCAACCCTACCTAA+TGG | + | chr2_2:4579531-4579550 | Msa0232320:intron | 40.0% | |
| GCAACAAACATACAGCTAGT+AGG | - | chr2_2:4579565-4579584 | None:intergenic | 40.0% | |
| GAGAATCCTACCTAGAAAAG+AGG | + | chr2_2:4579619-4579638 | Msa0232320:intron | 40.0% | |
| ! | TAAACCGCTACCTCTTTTCT+AGG | - | chr2_2:4579632-4579651 | None:intergenic | 40.0% |
| GCGATTGAATGAGATGACAT+TGG | - | chr2_2:4579874-4579893 | None:intergenic | 40.0% | |
| ! | TTTAGTGATCGGTTCATTCC+TGG | + | chr2_2:4579928-4579947 | Msa0232320:intron | 40.0% |
| ACATGCCCATCAACTCAAAT+TGG | - | chr2_2:4580071-4580090 | None:intergenic | 40.0% | |
| CCCACACTTTCTACTTGTTT+AGG | + | chr2_2:4580187-4580206 | Msa0232320:intron | 40.0% | |
| ACTTGTTTAGGTGCTAATGC+CGG | + | chr2_2:4580199-4580218 | Msa0232320:intron | 40.0% | |
| AAAGGCAGAAGAAAAACTGC+CGG | - | chr2_2:4580221-4580240 | None:intergenic | 40.0% | |
| AACATGCTATTGGAACTTGC+AGG | - | chr2_2:4580265-4580284 | None:intergenic | 40.0% | |
| TTTCAGCTTCTACACAGACG+AGG | - | chr2_2:4575278-4575297 | None:intergenic | 45.0% | |
| TTCCTTCCAGAGAGAAGAAG+CGG | - | chr2_2:4575312-4575331 | None:intergenic | 45.0% | |
| TGGAAGGAAGCTTCAATGTC+AGG | + | chr2_2:4575323-4575342 | Msa0232320:exon | 45.0% | |
| GAAGCTTCAATGTCAGGTGA+AGG | + | chr2_2:4575329-4575348 | Msa0232320:exon | 45.0% | |
| CGTCATTGTCTTCAGGAAGA+GGG | - | chr2_2:4575379-4575398 | None:intergenic | 45.0% | |
| TCGTCATTGTCTTCAGGAAG+AGG | - | chr2_2:4575380-4575399 | None:intergenic | 45.0% | |
| AAAGAGGGTTAGGTTTCCGA+AGG | + | chr2_2:4575547-4575566 | Msa0232320:CDS | 45.0% | |
| AAGAGGGTTAGGTTTCCGAA+GGG | + | chr2_2:4575548-4575567 | Msa0232320:CDS | 45.0% | |
| GGAGAAAGTAATTGCTGAGG+AGG | + | chr2_2:4575601-4575620 | Msa0232320:CDS | 45.0% | |
| !! | CGAAAATGGAGGTATCTCCA+AGG | + | chr2_2:4575709-4575728 | Msa0232320:CDS | 45.0% |
| ACAACGTTGTTTGATCCACG+TGG | + | chr2_2:4576374-4576393 | Msa0232320:intron | 45.0% | |
| GCCATGTTATACCACTAAGC+AGG | - | chr2_2:4576405-4576424 | None:intergenic | 45.0% | |
| !! | GTGGTATAACATGGCTTGGT+TGG | + | chr2_2:4576410-4576429 | Msa0232320:intron | 45.0% |
| ! | TCCAGTTTTCAGCACTTGGT+TGG | + | chr2_2:4576504-4576523 | Msa0232320:intron | 45.0% |
| !! | TCCAACCAAGTGCTGAAAAC+TGG | - | chr2_2:4576508-4576527 | None:intergenic | 45.0% |
| AAGGATTCTTGCAGGATGCA+TGG | + | chr2_2:4577008-4577027 | Msa0232320:intron | 45.0% | |
| ! | GAGGTTGATCCTAGATTTGC+TGG | + | chr2_2:4577043-4577062 | Msa0232320:CDS | 45.0% |
| ! | GTTTTTCTCTCCCTCATGGT+TGG | + | chr2_2:4577502-4577521 | Msa0232320:intron | 45.0% |
| ! | ATTGGGGATTACCGATTACC+TGG | - | chr2_2:4577538-4577557 | None:intergenic | 45.0% |
| AGGTCTTACAAGGCTTGAGA+AGG | + | chr2_2:4577801-4577820 | Msa0232320:intron | 45.0% | |
| TCATAGCATCCTCAGTTAGC+TGG | - | chr2_2:4577886-4577905 | None:intergenic | 45.0% | |
| !! | ACACAGACAAAGGTACCATC+AGG | - | chr2_2:4577999-4578018 | None:intergenic | 45.0% |
| AAGCTGGACAACACAGACAA+AGG | - | chr2_2:4578009-4578028 | None:intergenic | 45.0% | |
| ! | AATCTAGAAGCACAGCAAGC+TGG | - | chr2_2:4578025-4578044 | None:intergenic | 45.0% |
| ! | GCAAGAGAAGAAGGCATATC+TGG | + | chr2_2:4578630-4578649 | Msa0232320:CDS | 45.0% |
| ! | AGAAGGCATATCTGGGAACA+CGG | + | chr2_2:4578638-4578657 | Msa0232320:CDS | 45.0% |
| GAGCAATAAAGCCCTGTACT+TGG | - | chr2_2:4579132-4579151 | None:intergenic | 45.0% | |
| CTTTATTGCTCTGCAGCATC+AGG | + | chr2_2:4579141-4579160 | Msa0232320:CDS | 45.0% | |
| GCACAAGCACAGTCATACAT+CGG | - | chr2_2:4579403-4579422 | None:intergenic | 45.0% | |
| CCTACCTAGAAAAGAGGTAG+CGG | + | chr2_2:4579625-4579644 | Msa0232320:intron | 45.0% | |
| AGCCCTGTAAGAATCACATG+AGG | + | chr2_2:4579771-4579790 | Msa0232320:intron | 45.0% | |
| GCCCTGTAAGAATCACATGA+GGG | + | chr2_2:4579772-4579791 | Msa0232320:intron | 45.0% | |
| CCCCTCATGTGATTCTTACA+GGG | - | chr2_2:4579776-4579795 | None:intergenic | 45.0% | |
| CCCTGTAAGAATCACATGAG+GGG | + | chr2_2:4579773-4579792 | Msa0232320:intron | 45.0% | |
| GAGTTCTCAAGTTTGAACCC+AGG | - | chr2_2:4579833-4579852 | None:intergenic | 45.0% | |
| GGGTTCAAACTTGAGAACTC+TGG | + | chr2_2:4579833-4579852 | Msa0232320:intron | 45.0% | |
| TCTTTGTAGCTCACTGTCAC+TGG | + | chr2_2:4579966-4579985 | Msa0232320:intron | 45.0% | |
| CTTTGTAGCTCACTGTCACT+GGG | + | chr2_2:4579967-4579986 | Msa0232320:intron | 45.0% | |
| !! | TTGAGTTGATGGGCATGTCT+CGG | + | chr2_2:4580073-4580092 | Msa0232320:exon | 45.0% |
| CCACTGGAAGACAATGATTG+TGG | - | chr2_2:4580126-4580145 | None:intergenic | 45.0% | |
| CCACAATCATTGTCTTCCAG+TGG | + | chr2_2:4580123-4580142 | Msa0232320:three_prime_UTR | 45.0% | |
| TCTGTCTGTACATATGCCAC+TGG | - | chr2_2:4580142-4580161 | None:intergenic | 45.0% | |
| AACTTGTAATCGTGCTGAGC+AGG | + | chr2_2:4580307-4580326 | Msa0232320:intron | 45.0% | |
| !! | ATATTATATAAAATTAACAA+TGG | - | chr2_2:4577649-4577668 | None:intergenic | 5.0% |
| !!! | ATAATAAGAAAATTATTTTT+TGG | + | chr2_2:4578387-4578406 | Msa0232320:intron | 5.0% |
| GCGGAATCGTCATTGTCTTC+AGG | - | chr2_2:4575386-4575405 | None:intergenic | 50.0% | |
| AGAGGGTTAGGTTTCCGAAG+GGG | + | chr2_2:4575549-4575568 | Msa0232320:CDS | 50.0% | |
| AGGTTTCCGAAGGGGAAGAA+AGG | + | chr2_2:4575557-4575576 | Msa0232320:CDS | 50.0% | |
| GGTTTCCGAAGGGGAAGAAA+GGG | + | chr2_2:4575558-4575577 | Msa0232320:CDS | 50.0% | |
| GGTTTCCCTTTCTTCCCCTT+CGG | - | chr2_2:4575566-4575585 | None:intergenic | 50.0% | |
| !! | GAGGTTTTTGAGCGTGAAGC+AGG | + | chr2_2:4578128-4578147 | Msa0232320:CDS | 50.0% |
| ! | AACTTAGGGGAAGTTGGTCC+TGG | + | chr2_2:4578429-4578448 | Msa0232320:intron | 50.0% |
| ! | ACTTAGGGGAAGTTGGTCCT+GGG | + | chr2_2:4578430-4578449 | Msa0232320:intron | 50.0% |
| TTGGTCAGGGCAAGAGAAGA+AGG | + | chr2_2:4578621-4578640 | Msa0232320:CDS | 50.0% | |
| ! | CCGCTACCTCTTTTCTAGGT+AGG | - | chr2_2:4579628-4579647 | None:intergenic | 50.0% |
| GCCCCTCATGTGATTCTTAC+AGG | - | chr2_2:4579777-4579796 | None:intergenic | 50.0% | |
| !! | TGAGTTGATGGGCATGTCTC+GGG | + | chr2_2:4580074-4580093 | Msa0232320:exon | 50.0% |
| GAACAGCCGCTTCTTCTCTC+TGG | + | chr2_2:4575303-4575322 | Msa0232320:five_prime_UTR | 55.0% | |
| AGCCGCTTCTTCTCTCTGGA+AGG | + | chr2_2:4575307-4575326 | Msa0232320:five_prime_UTR | 55.0% | |
| CTGCGAAAGAGCGGGTGAAA+CGG | + | chr2_2:4575654-4575673 | Msa0232320:CDS | 55.0% | |
| GGCAGCTTGTCCGTCATCAT+CGG | - | chr2_2:4578682-4578701 | None:intergenic | 55.0% | |
| TCACTTTGCAAAGCTCCGCC+TGG | - | chr2_2:4578872-4578891 | None:intergenic | 55.0% | |
| GCTCTGCAGCATCAGGGAAA+TGG | + | chr2_2:4579148-4579167 | Msa0232320:CDS | 55.0% | |
| !! | GAGTTGATGGGCATGTCTCG+GGG | + | chr2_2:4580075-4580094 | Msa0232320:exon | 55.0% |
| !! | AGTTGATGGGCATGTCTCGG+GGG | + | chr2_2:4580076-4580095 | Msa0232320:exon | 55.0% |
| TCGTGCTGAGCAGGCTGTTA+CGG | + | chr2_2:4580316-4580335 | Msa0232320:intron | 55.0% | |
| GAAGGTTCATCTCGCAGCCG+CGG | + | chr2_2:4575347-4575366 | Msa0232320:CDS | 60.0% | |
| CGCTCTTTCGCAGCAACAGC+CGG | - | chr2_2:4575647-4575666 | None:intergenic | 60.0% | |
| CGGCTGTTGCTGCGAAAGAG+CGG | + | chr2_2:4575645-4575664 | Msa0232320:CDS | 60.0% | |
| GGCTGTTGCTGCGAAAGAGC+GGG | + | chr2_2:4575646-4575665 | Msa0232320:CDS | 60.0% | |
| CGAAAGAGCGGGTGAAACGG+AGG | + | chr2_2:4575657-4575676 | Msa0232320:CDS | 60.0% | |
| ACTAAGCAGGATCGGCCACG+TGG | - | chr2_2:4576392-4576411 | None:intergenic | 60.0% | |
| ACGTGGCCGATCCTGCTTAG+TGG | + | chr2_2:4576391-4576410 | Msa0232320:intron | 60.0% | |
| !! | CAGGAAGAGGGCGTTTGCCG+CGG | - | chr2_2:4575367-4575386 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 4575234 | 4580508 | 4575234 | ID=Msa0232320;Name=Msa0232320 |
| chr2_2 | mRNA | 4575234 | 4580508 | 4575234 | ID=Msa0232320-mRNA-1;Parent=Msa0232320;Name=Msa0232320-mRNA-1;_AED=0.20;_eAED=0.20;_QI=104|0.9|0.90|1|0.9|0.81|11|113|376 |
| chr2_2 | exon | 4575234 | 4575417 | 4575234 | ID=Msa0232320-mRNA-1:exon:1885;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4575544 | 4575751 | 4575544 | ID=Msa0232320-mRNA-1:exon:1886;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4576806 | 4576931 | 4576806 | ID=Msa0232320-mRNA-1:exon:1887;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4577022 | 4577174 | 4577022 | ID=Msa0232320-mRNA-1:exon:1888;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4577803 | 4577920 | 4577803 | ID=Msa0232320-mRNA-1:exon:1889;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4578108 | 4578149 | 4578108 | ID=Msa0232320-mRNA-1:exon:1890;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4578559 | 4578774 | 4578559 | ID=Msa0232320-mRNA-1:exon:1891;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4578873 | 4578915 | 4578873 | ID=Msa0232320-mRNA-1:exon:1892;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4579092 | 4579169 | 4579092 | ID=Msa0232320-mRNA-1:exon:1893;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4580015 | 4580183 | 4580015 | ID=Msa0232320-mRNA-1:exon:1894;Parent=Msa0232320-mRNA-1 |
| chr2_2 | exon | 4580498 | 4580508 | 4580498 | ID=Msa0232320-mRNA-1:exon:1895;Parent=Msa0232320-mRNA-1 |
| chr2_2 | five_prime_UTR | 4575234 | 4575337 | 4575234 | ID=Msa0232320-mRNA-1:five_prime_utr;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4575338 | 4575417 | 4575338 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4575544 | 4575751 | 4575544 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4576806 | 4576931 | 4576806 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4577022 | 4577174 | 4577022 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4577803 | 4577920 | 4577803 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4578108 | 4578149 | 4578108 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4578559 | 4578774 | 4578559 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4578873 | 4578915 | 4578873 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4579092 | 4579169 | 4579092 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | CDS | 4580015 | 4580081 | 4580015 | ID=Msa0232320-mRNA-1:cds;Parent=Msa0232320-mRNA-1 |
| chr2_2 | three_prime_UTR | 4580082 | 4580183 | 4580082 | ID=Msa0232320-mRNA-1:three_prime_utr;Parent=Msa0232320-mRNA-1 |
| chr2_2 | three_prime_UTR | 4580498 | 4580508 | 4580498 | ID=Msa0232320-mRNA-1:three_prime_utr;Parent=Msa0232320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
