AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0069600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069600 MtrunA17_Chr1g0173391 99.740 769 2 0 1 769 1 769 0.0 1582
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0069600 AT2G41770.1 71.337 778 207 6 1 769 1 771 0.0 1172
Msa0069600 AT3G57420.1 70.323 775 214 6 1 769 1 765 0.0 1136

Find 212 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGATGAACAAGCGAATT+TGG 0.154291 1_2:-38553340 Msa0069600:CDS
TGGATCGTGGTTTCGGTTTC+GGG 0.176847 1_2:-38553477 Msa0069600:CDS
TTACCCCTTTATTGTATATT+TGG 0.182549 1_2:-38549637 Msa0069600:three_prime_UTR
GCAGAAATAAACTGAATAAA+AGG 0.182801 1_2:+38549488 None:intergenic
ATGGATCGTGGTTTCGGTTT+CGG 0.202501 1_2:-38553478 Msa0069600:CDS
CTTGAATGGAGGTTGCTTTA+TGG 0.204494 1_2:-38552226 Msa0069600:CDS
TTGTTATCTCACACCTTATT+AGG 0.208278 1_2:+38554089 None:intergenic
GGCTTTGATGCTTCCGGTTT+CGG 0.226169 1_2:-38552791 Msa0069600:CDS
TTAATCCGTATGTTCATTTC+GGG 0.242895 1_2:-38553092 Msa0069600:CDS
CCATTTCTCCGATAAGAAAT+TGG 0.244039 1_2:+38553497 None:intergenic
GGAAGTGATTGATGGGGATT+TGG 0.244626 1_2:-38553205 Msa0069600:CDS
CTGCATGAAGAACATCTTAT+AGG 0.244786 1_2:-38549469 Msa0069600:three_prime_UTR
GTTAATCCGTATGTTCATTT+CGG 0.262879 1_2:-38553093 Msa0069600:CDS
TGGTCGTTTGATTAAGTATT+TGG 0.267726 1_2:-38552611 Msa0069600:CDS
TTGAATGGAGGTTGCTTTAT+GGG 0.271758 1_2:-38552225 Msa0069600:CDS
ATTGGGGACAGAGGCTTCTT+TGG 0.272761 1_2:-38552735 Msa0069600:CDS
CAAGTGTATTACATGTTTCT+TGG 0.275021 1_2:+38549769 None:intergenic
ATAATACAATTCTTAACTAT+TGG 0.279959 1_2:-38551254 Msa0069600:CDS
GGATTTGGATTTGGATTTGA+TGG 0.280995 1_2:+38553795 None:intergenic
CAGAGGCTTCTTTGGGAAGT+TGG 0.281653 1_2:-38552727 Msa0069600:CDS
ATGTGAAACACCACCTAATA+AGG 0.289444 1_2:-38554102 Msa0069600:five_prime_UTR
CAATACAACTTCAACTAGTT+TGG 0.291418 1_2:+38554045 None:intergenic
ACTTACTGCCGCTTGGCTTC+AGG 0.292900 1_2:-38552491 Msa0069600:CDS
AACAAGCGAATTTGGGGTTT+AGG 0.295560 1_2:-38553332 Msa0069600:CDS
GTGGACCAAATATACAATAA+AGG 0.296960 1_2:+38549632 None:intergenic
TTGGATGAACAAGCGAATTT+GGG 0.298467 1_2:-38553339 Msa0069600:CDS
GAAGTGATTGATGGGGATTT+GGG 0.301864 1_2:-38553204 Msa0069600:CDS
GGAGAAATGGATCGTGGTTT+CGG 0.315807 1_2:-38553484 Msa0069600:CDS
ACAAGCGAATTTGGGGTTTA+GGG 0.318031 1_2:-38553331 Msa0069600:CDS
TAAGGTTGAGGTTACTTGTT+TGG 0.318086 1_2:+38554001 None:intergenic
TCCTATGTTCTTTGTCTCAA+TGG 0.319924 1_2:-38550024 Msa0069600:CDS
GGATGTAGATCTTGTTGTTC+AGG 0.321727 1_2:-38552164 Msa0069600:CDS
TATTAAGCTTATCAGAATAA+TGG 0.322958 1_2:-38549868 Msa0069600:CDS
GGATTAACAACAGTCCTATT+AGG 0.325620 1_2:+38553108 None:intergenic
TAATTCATCGACTCTTTATT+CGG 0.328571 1_2:-38549940 Msa0069600:CDS
TGGACCAAATATACAATAAA+GGG 0.337671 1_2:+38549633 None:intergenic
GCAGCCAAGGCTAATGTCTT+TGG 0.343412 1_2:-38552446 Msa0069600:CDS
AGTTGCCGTCTGTTCATCTT+GGG 0.343959 1_2:-38552363 Msa0069600:CDS
TGCATGAAGAACATCTTATA+GGG 0.345636 1_2:-38549468 Msa0069600:three_prime_UTR
CAAACTGTGGATCACTAATA+AGG 0.351930 1_2:-38551208 Msa0069600:intron
TGCCTTATGATTCTTATGTT+AGG 0.355042 1_2:-38553296 Msa0069600:CDS
TCAAGGGCCGTGCGTTCAAC+AGG 0.356613 1_2:+38552244 None:intergenic
CCAATTTCTTATCGGAGAAA+TGG 0.359485 1_2:-38553497 Msa0069600:CDS
TGTTGTTCAGGAGGTCCATT+TGG 0.361246 1_2:-38552152 Msa0069600:CDS
CTTATTAGTGATCCACAGTT+TGG 0.364518 1_2:+38551209 None:intergenic
CCTTTCAAACCAATTCCATT+AGG 0.365051 1_2:+38549829 None:intergenic
TAGATTGTTTGAGAAGATCT+TGG 0.375637 1_2:-38552566 Msa0069600:CDS
GGATCCACTCCTAATGGAAT+TGG 0.390534 1_2:-38549838 Msa0069600:CDS
ATAGTCATGATAATCCTAAT+AGG 0.391156 1_2:-38553122 Msa0069600:CDS
TGAAGTTGTATTGAAGCTTA+AGG 0.391419 1_2:-38554035 Msa0069600:five_prime_UTR
CATCTTGGGGTTGAAGAAAC+AGG 0.392444 1_2:-38552349 Msa0069600:CDS
GCGGTACGCCAATTTCTTAT+CGG 0.393983 1_2:-38553505 Msa0069600:CDS
CTACTGTTCATAGATATGAT+AGG 0.407020 1_2:-38552681 Msa0069600:CDS
TTGGAAAATGTGGGTGAGAT+TGG 0.407974 1_2:-38553039 Msa0069600:CDS
CAGAAATAAACTGAATAAAA+GGG 0.411894 1_2:+38549489 None:intergenic
AAGGTTGAGGTTACTTGTTT+GGG 0.411934 1_2:+38554002 None:intergenic
TTGGGGACAGAGGCTTCTTT+GGG 0.414271 1_2:-38552734 Msa0069600:CDS
AGGCTAATGTCTTTGGAACT+TGG 0.425095 1_2:-38552439 Msa0069600:CDS
TTTGAGCTGAAGAATGCTCT+TGG 0.429481 1_2:+38553820 None:intergenic
ACTTGTATGCTTGGTCCAAA+TGG 0.429651 1_2:+38552137 None:intergenic
AAGTTGCCGTCTGTTCATCT+TGG 0.435637 1_2:-38552364 Msa0069600:CDS
GGATCTCTAGATTGTCTACT+AGG 0.437860 1_2:+38550063 None:intergenic
TCGAGTATCCACGCGTCGAT+TGG 0.438176 1_2:-38553560 Msa0069600:CDS
CTTCAGGATTTGTTAGCTGT+TGG 0.439157 1_2:-38552475 Msa0069600:CDS
GCCATCCTACTAACCGAAAC+CGG 0.441030 1_2:+38552778 None:intergenic
TTCCTAACATAAGAATCATA+AGG 0.444632 1_2:+38553294 None:intergenic
AAGATCTTTCTCCTCCGAAA+AGG 0.448139 1_2:+38552645 None:intergenic
TCCGGTTTCGGTTAGTAGGA+TGG 0.448274 1_2:-38552779 Msa0069600:CDS
ACAGGGCTTACTTGTATGCT+TGG 0.450117 1_2:+38552128 None:intergenic
TCTTATGTTAGGAAAATTGT+TGG 0.452749 1_2:-38553285 Msa0069600:CDS
GTATGAGTAAAACGGTTTGT+AGG 0.456341 1_2:+38553744 None:intergenic
AAGTGATTGATGGGGATTTG+GGG 0.459051 1_2:-38553203 Msa0069600:CDS
CTGTTTCTTAATACTAGCTC+AGG 0.460358 1_2:-38549800 Msa0069600:three_prime_UTR
TGCTTCCGGTTTCGGTTAGT+AGG 0.460720 1_2:-38552783 Msa0069600:CDS
TGGGAAACAGTTTATTCAGC+AGG 0.461080 1_2:-38552986 Msa0069600:CDS
ATCGTATTAAATGAATTAAC+CGG 0.461414 1_2:+38552835 None:intergenic
GGTTGGCAGGTTGTGGCGAT+TGG 0.462329 1_2:-38553414 Msa0069600:CDS
ATTTCGGGCAAAGATCGGTT+TGG 0.462691 1_2:-38553077 Msa0069600:CDS
GGTGAAGGTGAAGGGTTGGC+AGG 0.466313 1_2:-38553427 Msa0069600:CDS
TTGAACGCACGGCCCTTGAA+TGG 0.467596 1_2:-38552240 Msa0069600:CDS
TGCTCATCATGCATTGCAGC+GGG 0.467759 1_2:-38552267 Msa0069600:CDS
CATAAAGCAACCTCCATTCA+AGG 0.468909 1_2:+38552227 None:intergenic
TAAGAATTGTATTATCCTGC+AGG 0.478651 1_2:+38551262 None:intergenic
GAGTGATGAGTTGAAGAAAT+TGG 0.478927 1_2:-38553448 Msa0069600:CDS
TGAAGGGGATCCACTCCTAA+TGG 0.480182 1_2:-38549844 Msa0069600:CDS
TTTATATTCTAAAATTTGTA+GGG 0.481296 1_2:-38549682 Msa0069600:three_prime_UTR
CCTTGAGGCAATGCAACCTT+CGG 0.482435 1_2:+38552868 None:intergenic
ACAAGCAAGCATGGTACAAA+AGG 0.482807 1_2:-38550222 Msa0069600:CDS
GATAGAGGGGAAGTGATTGA+TGG 0.484221 1_2:-38553213 Msa0069600:CDS
CAAGAAACATGTAATACACT+TGG 0.488778 1_2:-38549768 Msa0069600:three_prime_UTR
CCGGCGGATTGGAGTTTGAA+AGG 0.489846 1_2:-38553378 Msa0069600:CDS
CTTATGTTAGGAAAATTGTT+GGG 0.491867 1_2:-38553284 Msa0069600:CDS
TGGAAAATGTGGGTGAGATT+GGG 0.491908 1_2:-38553038 Msa0069600:CDS
GGTGAAGGGTTGGCAGGTTG+TGG 0.495035 1_2:-38553421 Msa0069600:CDS
ATTCGAGAACTCCGGCGGAT+TGG 0.496519 1_2:-38553389 Msa0069600:CDS
CCGTCGCCAATGTTTGCTCT+CGG 0.496762 1_2:+38552412 None:intergenic
TGTTCATTTCGGGCAAAGAT+CGG 0.496894 1_2:-38553082 Msa0069600:CDS
ATAGAGGGGAAGTGATTGAT+GGG 0.496914 1_2:-38553212 Msa0069600:CDS
CGCGAATTTCTATCGGCGAT+TGG 0.499666 1_2:+38553525 None:intergenic
GGTTCTTTGTATGAGTAAAA+CGG 0.504942 1_2:+38553736 None:intergenic
TTTGTGGGATAAACTCCCTC+TGG 0.506060 1_2:+38552386 None:intergenic
GAAGAAATTGGTGAAGGTGA+AGG 0.511928 1_2:-38553436 Msa0069600:CDS
CCTAATGGAATTGGTTTGAA+AGG 0.515705 1_2:-38549829 Msa0069600:exon
AGGTTTGCCGTTGGAAAATG+TGG 0.515820 1_2:-38553049 Msa0069600:CDS
ATTTGATAAGCATGCGCCGA+AGG 0.516174 1_2:-38552884 Msa0069600:CDS
AGATCTTTCTCCTCCGAAAA+GGG 0.517524 1_2:+38552646 None:intergenic
AGGCTTCTTTGGGAAGTTGG+TGG 0.517813 1_2:-38552724 Msa0069600:CDS
GATGTTGAATTGGTTGGTGA+AGG 0.518714 1_2:-38553171 Msa0069600:CDS
ACACTCCATGGATGAACAGC+AGG 0.520445 1_2:+38549909 None:intergenic
TAAAACACAGAATCAACATC+AGG 0.525213 1_2:+38552946 None:intergenic
GGATCCAGGTACCCGAGTCT+TGG 0.526382 1_2:-38550289 Msa0069600:intron
AGATTGCTAATTTAATCAGA+TGG 0.527605 1_2:-38552312 Msa0069600:CDS
ATTCAGCAGGGGATTTCGAA+TGG 0.529606 1_2:-38552973 Msa0069600:CDS
GTATTTGGTTCTGTGGAGAT+CGG 0.533204 1_2:-38552596 Msa0069600:CDS
AAGTCCCTGCTGTTCATCCA+TGG 0.538895 1_2:-38549914 Msa0069600:CDS
TGCTCACTTGATACACTCCA+TGG 0.539121 1_2:+38549897 None:intergenic
ATATTCTAAAATTTGTAGGG+TGG 0.539442 1_2:-38549679 Msa0069600:three_prime_UTR
GGCGTACCGCGAATTTCTAT+CGG 0.540568 1_2:+38553518 None:intergenic
CTTATCAGAATAATGGCTGA+AGG 0.541500 1_2:-38549861 Msa0069600:CDS
TTATCTCACACCTTATTAGG+TGG 0.541597 1_2:+38554092 None:intergenic
CCGAAGGTTGCATTGCCTCA+AGG 0.543760 1_2:-38552868 Msa0069600:CDS
CAAACCAATTCCATTAGGAG+TGG 0.547394 1_2:+38549834 None:intergenic
AATTGGTTGGTGAAGGTGCT+AGG 0.547539 1_2:-38553164 Msa0069600:CDS
TAGGAATTGCAACCTTCTGA+TGG 0.548976 1_2:+38550042 None:intergenic
TACTGTTCATAGATATGATA+GGG 0.549071 1_2:-38552680 Msa0069600:CDS
GAGCTATGCAATGGCAGAGG+AGG 0.549739 1_2:-38552539 Msa0069600:CDS
GATCAATTTAGCAGTGCAGA+AGG 0.550258 1_2:-38551294 Msa0069600:CDS
AAAGATCTTCATGTGAATGT+TGG 0.550556 1_2:-38552631 Msa0069600:CDS
AATTGGTGAAGGTGAAGGGT+TGG 0.551021 1_2:-38553431 Msa0069600:CDS
AATTTCTTCAACTCATCACT+CGG 0.551834 1_2:+38553450 None:intergenic
AGTTCCAAAGACATTAGCCT+TGG 0.553282 1_2:+38552442 None:intergenic
TGATTAAGTATTTGGTTCTG+TGG 0.556491 1_2:-38552603 Msa0069600:CDS
CTGTTGGTTATCAGCAGCCA+AGG 0.556994 1_2:-38552459 Msa0069600:CDS
CAAAGATCGGTTTGGCCGAG+AGG 0.557674 1_2:-38553069 Msa0069600:CDS
ATGTGAAACTTACTGCCGCT+TGG 0.558320 1_2:-38552498 Msa0069600:CDS
AGTAAGTTTCACATCCTTGT+CGG 0.561276 1_2:+38552507 None:intergenic
CTTCAACTAGTTTGGTGTGG+TGG 0.566078 1_2:+38554053 None:intergenic
CTATTGGAACTTACTACAAG+CGG 0.566905 1_2:-38551238 Msa0069600:CDS
TTATCAAATCGAATATCAAA+CGG 0.567778 1_2:+38552898 None:intergenic
GGTTACTTGTTTGGGTGTGT+CGG 0.569498 1_2:+38554010 None:intergenic
TTATCAGAATAATGGCTGAA+GGG 0.569902 1_2:-38549860 Msa0069600:CDS
TATCAGAATAATGGCTGAAG+GGG 0.570759 1_2:-38549859 Msa0069600:CDS
GGGAAACAGTTTATTCAGCA+GGG 0.570903 1_2:-38552985 Msa0069600:CDS
AGCTATGCAATGGCAGAGGA+GGG 0.571690 1_2:-38552538 Msa0069600:CDS
CAGCGGGCCTGTTGAACGCA+CGG 0.576027 1_2:-38552251 Msa0069600:CDS
GAACCTCGACTTCTCCGTAT+GGG 0.576994 1_2:-38553718 Msa0069600:CDS
TAATTGACTTGAAAGTGAGC+TGG 0.577756 1_2:+38550185 None:intergenic
AAGAAATTGGTGAAGGTGAA+GGG 0.578264 1_2:-38553435 Msa0069600:CDS
TTGGCCGAGAGGTTTGCCGT+TGG 0.578979 1_2:-38553058 Msa0069600:CDS
TCATAGATATGATAGGGTTG+AGG 0.580741 1_2:-38552674 Msa0069600:CDS
CTTTGCCCGAAATGAACATA+CGG 0.581045 1_2:+38553087 None:intergenic
TTTACACTCAGGTGTTTGGT+GGG 0.581224 1_2:-38553005 Msa0069600:CDS
TTATAGGGAAACATTGATTG+TGG 0.581383 1_2:-38549453 Msa0069600:three_prime_UTR
GTTGCCGTCTGTTCATCTTG+GGG 0.584264 1_2:-38552362 Msa0069600:CDS
AGAACCTCGACTTCTCCGTA+TGG 0.585282 1_2:-38553719 Msa0069600:CDS
CTATCATATCTATGAACAGT+AGG 0.586324 1_2:+38552682 None:intergenic
GCCTCAAGGTGTGATGATGC+CGG 0.591200 1_2:-38552854 Msa0069600:CDS
GTTATCTCAACAAGCAAGCA+TGG 0.594597 1_2:-38550231 Msa0069600:CDS
AGGTGTGAGATAACAACAAG+TGG 0.599232 1_2:-38554082 Msa0069600:five_prime_UTR
CTTGGATTTGAGCTATGCAA+TGG 0.599337 1_2:-38552548 Msa0069600:CDS
TGGTGAAGGTGCTAGGCAAG+AGG 0.599388 1_2:-38553157 Msa0069600:CDS
CTGGGGACAACAATGCCGAC+TGG 0.599896 1_2:-38550253 Msa0069600:CDS
TGAGAGGTTATTGGGGACAG+AGG 0.600387 1_2:-38552744 Msa0069600:CDS
AGAAATAAACTGAATAAAAG+GGG 0.604349 1_2:+38549490 None:intergenic
TGTAGATCTTGTTGTTCAGG+AGG 0.604664 1_2:-38552161 Msa0069600:CDS
AAGAAACATGTAATACACTT+GGG 0.605203 1_2:-38549767 Msa0069600:three_prime_UTR
TCTCAGAACTGCATAACAAG+AGG 0.608851 1_2:+38550135 None:intergenic
ATAAAGCAACCTCCATTCAA+GGG 0.609066 1_2:+38552228 None:intergenic
AACGCACGGCCCTTGAATGG+AGG 0.610127 1_2:-38552237 Msa0069600:CDS
GTGCTCATCATGCATTGCAG+CGG 0.613729 1_2:-38552268 Msa0069600:CDS
TGGATGAACAAGCGAATTTG+GGG 0.613883 1_2:-38553338 Msa0069600:CDS
CTTATCGGAGAAATGGATCG+TGG 0.614495 1_2:-38553490 Msa0069600:CDS
GATTGGTGATTCGAGAACTC+CGG 0.618148 1_2:-38553397 Msa0069600:CDS
CAATCTAGAGATCCATCAGA+AGG 0.618842 1_2:-38550054 Msa0069600:CDS
TAAAGAGTCGATGAATTAGT+CGG 0.622063 1_2:+38549945 None:intergenic
TCATATCTATGAACAGTAGG+TGG 0.622312 1_2:+38552685 None:intergenic
CAATCGCCGATAGAAATTCG+CGG 0.623883 1_2:-38553524 Msa0069600:CDS
TCCATTGAGACAAAGAACAT+AGG 0.624497 1_2:+38550023 None:intergenic
CCTTTCAAACTCCAATCCGC+CGG 0.626527 1_2:+38553378 None:intergenic
CCGAGAGCAAACATTGGCGA+CGG 0.626681 1_2:-38552412 Msa0069600:CDS
TTTCTGTCTCTCTGTCTGTG+TGG 0.626924 1_2:-38553959 Msa0069600:five_prime_UTR
ATTTCTTCAACTCATCACTC+GGG 0.628878 1_2:+38553451 None:intergenic
TTTGAGCTATGCAATGGCAG+AGG 0.629954 1_2:-38552542 Msa0069600:CDS
AAAACAGAAGACCAAGACTC+GGG 0.631408 1_2:+38550278 None:intergenic
ACCGGCATCATCACACCTTG+AGG 0.632524 1_2:+38552853 None:intergenic
TAAAACAGAAGACCAAGACT+CGG 0.634593 1_2:+38550277 None:intergenic
CAACTTCAACTAGTTTGGTG+TGG 0.635626 1_2:+38554050 None:intergenic
TAGGAAGAAAAGTGCTGCGA+CGG 0.642741 1_2:+38553647 None:intergenic
GGAAACAGTTTATTCAGCAG+GGG 0.643036 1_2:-38552984 Msa0069600:CDS
GGTCGTCCGAGAGCAAACAT+TGG 0.645849 1_2:-38552418 Msa0069600:CDS
TGGTGATTCGAGAACTCCGG+CGG 0.650136 1_2:-38553394 Msa0069600:CDS
GGACCAAATATACAATAAAG+GGG 0.650966 1_2:+38549634 None:intergenic
CTCGAAACAAAGTAAAGCGG+CGG 0.651448 1_2:+38553608 None:intergenic
TATTTGTTTGCAATTCAACA+TGG 0.651854 1_2:-38553261 Msa0069600:CDS
ATGCCCATACGGAGAAGTCG+AGG 0.653724 1_2:+38553715 None:intergenic
GATTGTCTACTAGGTTAACA+AGG 0.654365 1_2:+38550072 None:intergenic
TAGAGGGGAAGTGATTGATG+GGG 0.654974 1_2:-38553211 Msa0069600:CDS
TCAACCCCAAGATGAACAGA+CGG 0.659344 1_2:+38552358 None:intergenic
TGAGTTGAAGAAATTGGTGA+AGG 0.667739 1_2:-38553442 Msa0069600:CDS
GGTTACGACGAGAAGAATGA+CGG 0.668817 1_2:+38553668 None:intergenic
GTTCTCGAAACAAAGTAAAG+CGG 0.672242 1_2:+38553605 None:intergenic
CATTGGCGACGGAGACCAGA+GGG 0.673144 1_2:-38552401 Msa0069600:CDS
TAACAAATCCTGAAGCCAAG+CGG 0.680742 1_2:+38552483 None:intergenic
TGCTTGTTGAGATAACCAGT+CGG 0.682815 1_2:+38550238 None:intergenic
CGGTGTCGCCAACGTTACGT+AGG 0.691901 1_2:+38553628 None:intergenic
AAGCGGATAAAACCAAACTG+TGG 0.694265 1_2:-38551221 Msa0069600:CDS
CACTCCATGGATGAACAGCA+GGG 0.698430 1_2:+38549910 None:intergenic
AGAGTCGATGAATTAGTCGG+AGG 0.700411 1_2:+38549948 None:intergenic
GGTTTGCCGTTGGAAAATGT+GGG 0.718853 1_2:-38553048 Msa0069600:CDS
AAATCACTAATTAAGCGCTG+AGG 0.719879 1_2:+38550101 None:intergenic
ACTTGGGTAAATCATCTACA+CGG 0.722737 1_2:-38549751 Msa0069600:three_prime_UTR
ACATTGGCGACGGAGACCAG+AGG 0.725189 1_2:-38552402 Msa0069600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATTCTAAAATTTGT+AGG - chr1_2:38553868-38553887 Msa0069600:five_prime_UTR 10.0%
!!! TTTATATTCTAAAATTTGTA+GGG - chr1_2:38553869-38553888 Msa0069600:five_prime_UTR 10.0%
!!! AAGAAAAAAAAAAAAAGTGT+TGG + chr1_2:38549701-38549720 None:intergenic 15.0%
!!! TTTTTTTTTTTCTTCAATGT+TGG - chr1_2:38549707-38549726 Msa0069600:three_prime_UTR 15.0%
!!! AACAATTTTGTAAAGATTTT+CGG + chr1_2:38549862-38549881 None:intergenic 15.0%
!!! CAATATAGTTTTAATAATTG+CGG - chr1_2:38551519-38551538 Msa0069600:intron 15.0%
!! ATTAGAAATAAATCATGAAA+AGG - chr1_2:38552095-38552114 Msa0069600:intron 15.0%
!! TTAGAAATAAATCATGAAAA+GGG - chr1_2:38552096-38552115 Msa0069600:intron 15.0%
!! AAATTAAAATTATATCCAGT+AGG + chr1_2:38552198-38552217 None:intergenic 15.0%
!!! CTAAATTGATCAAATATTTT+TGG + chr1_2:38552248-38552267 None:intergenic 15.0%
!! ATAATACAATTCTTAACTAT+TGG - chr1_2:38552297-38552316 Msa0069600:CDS 15.0%
!!! TTTTTTACATAACATATGAT+TGG + chr1_2:38552672-38552691 None:intergenic 15.0%
!! AAACATTATATTAACAACTT+AGG + chr1_2:38552703-38552722 None:intergenic 15.0%
!! AAAAGAAAAACATAAATACA+GGG + chr1_2:38552823-38552842 None:intergenic 15.0%
!! TAAAAGAAAAACATAAATAC+AGG + chr1_2:38552824-38552843 None:intergenic 15.0%
!! AAGATATGTGAAAATTATAA+AGG - chr1_2:38553038-38553057 Msa0069600:CDS 15.0%
!! AGATATGTGAAAATTATAAA+GGG - chr1_2:38553039-38553058 Msa0069600:CDS 15.0%
!!! ATATTTTCACAAAAAAAGAA+AGG + chr1_2:38553969-38553988 None:intergenic 15.0%
!!! TTTTTTGTGAAAATATGAAA+CGG - chr1_2:38553973-38553992 Msa0069600:five_prime_UTR 15.0%
!!! CTTTTTTTCAAATAAGGTTT+TGG + chr1_2:38549780-38549799 None:intergenic 20.0%
!!! AGATCACTTTTTTTCAAATA+AGG + chr1_2:38549786-38549805 None:intergenic 20.0%
!!! ATTCTGTGTTTTATTTTACA+AGG - chr1_2:38550615-38550634 Msa0069600:intron 20.0%
!!! GTTTTATTTTACAAGGAAAT+CGG - chr1_2:38550622-38550641 Msa0069600:intron 20.0%
!!! TTTTATTTTACAAGGAAATC+GGG - chr1_2:38550623-38550642 Msa0069600:intron 20.0%
!! TTATCAAATCGAATATCAAA+CGG + chr1_2:38550656-38550675 None:intergenic 20.0%
!! ATCGTATTAAATGAATTAAC+CGG + chr1_2:38550719-38550738 None:intergenic 20.0%
!!! ATTTGGTATCAAATGTTTTA+TGG - chr1_2:38551675-38551694 Msa0069600:intron 20.0%
!!! TTTGGTATCAAATGTTTTAT+GGG - chr1_2:38551676-38551695 Msa0069600:intron 20.0%
!! CATATATTAATGTTAGCATA+TGG + chr1_2:38551874-38551893 None:intergenic 20.0%
!! ATGTTATGTAAAAAAGAGTT+TGG - chr1_2:38552677-38552696 Msa0069600:CDS 20.0%
!!! TTTTTTTCACTAAATCATGT+TGG - chr1_2:38552737-38552756 Msa0069600:CDS 20.0%
!! AAAGAAAAACATAAATACAG+GGG + chr1_2:38552822-38552841 None:intergenic 20.0%
!!! TAATGTGTTCATTTTATGTA+TGG + chr1_2:38553002-38553021 None:intergenic 20.0%
!! TATTAAGCTTATCAGAATAA+TGG - chr1_2:38553683-38553702 Msa0069600:CDS 20.0%
!! ATAAAGGGGTAAAAAAAAAA+GGG + chr1_2:38553906-38553925 None:intergenic 20.0%
!! AATAAAGGGGTAAAAAAAAA+AGG + chr1_2:38553907-38553926 None:intergenic 20.0%
!! AGAAATAAACTGAATAAAAG+GGG + chr1_2:38554064-38554083 None:intergenic 20.0%
!! CAGAAATAAACTGAATAAAA+GGG + chr1_2:38554065-38554084 None:intergenic 20.0%
!!! TTCAAATAAGGTTTTGGATT+TGG + chr1_2:38549774-38549793 None:intergenic 25.0%
! TTCCTAACATAAGAATCATA+AGG + chr1_2:38550260-38550279 None:intergenic 25.0%
! TCTTATGTTAGGAAAATTGT+TGG - chr1_2:38550266-38550285 Msa0069600:CDS 25.0%
! CTTATGTTAGGAAAATTGTT+GGG - chr1_2:38550267-38550286 Msa0069600:CDS 25.0%
! TATTTGTTTGCAATTCAACA+TGG - chr1_2:38550290-38550309 Msa0069600:intron 25.0%
!!! GAAACATTTTGATGTTGAAT+TGG - chr1_2:38550370-38550389 Msa0069600:intron 25.0%
! ATAGTCATGATAATCCTAAT+AGG - chr1_2:38550429-38550448 Msa0069600:intron 25.0%
! TACTGTTCATAGATATGATA+GGG - chr1_2:38550871-38550890 Msa0069600:intron 25.0%
! AGATTGCTAATTTAATCAGA+TGG - chr1_2:38551239-38551258 Msa0069600:CDS 25.0%
! GTTGTATGCAAAATAAAACA+GGG + chr1_2:38551443-38551462 None:intergenic 25.0%
! AGTTGTATGCAAAATAAAAC+AGG + chr1_2:38551444-38551463 None:intergenic 25.0%
! ATTTGATACCAAATTGTGAA+GGG + chr1_2:38551669-38551688 None:intergenic 25.0%
! TTCAGAGTCTGATAAAATAT+CGG - chr1_2:38551782-38551801 Msa0069600:intron 25.0%
! GATTAGAAATAAATGCTTCA+CGG + chr1_2:38551980-38551999 None:intergenic 25.0%
!!! ACTTTTTGATTGATCATGAA+AGG - chr1_2:38552007-38552026 Msa0069600:intron 25.0%
! ATATGAAAGTAGAGTTAAGA+TGG - chr1_2:38552066-38552085 Msa0069600:intron 25.0%
! AATACACTAGTACTTCAATA+AGG + chr1_2:38552146-38552165 None:intergenic 25.0%
!!! TTACTACTATTTTTTCCTAC+TGG - chr1_2:38552180-38552199 Msa0069600:CDS 25.0%
!!! ATTGATCAAATATTTTTGGC+AGG + chr1_2:38552244-38552263 None:intergenic 25.0%
!!! AACGTTTTTTAAAACCAAAC+AGG + chr1_2:38552424-38552443 None:intergenic 25.0%
! TTGCAAATTAAAACAGAAAG+TGG + chr1_2:38552458-38552477 None:intergenic 25.0%
! TGACTTTGATCAAATAATGA+GGG + chr1_2:38552797-38552816 None:intergenic 25.0%
! TTGACTTTGATCAAATAATG+AGG + chr1_2:38552798-38552817 None:intergenic 25.0%
!! TTTGAAATAGTGCTCATTTA+GGG + chr1_2:38552859-38552878 None:intergenic 25.0%
!! ATTTGAAATAGTGCTCATTT+AGG + chr1_2:38552860-38552879 None:intergenic 25.0%
! ATAATCATTAGAGGCTTATT+TGG + chr1_2:38552908-38552927 None:intergenic 25.0%
! CAGACAATAATAATCATTAG+AGG + chr1_2:38552917-38552936 None:intergenic 25.0%
! CTCTAATGATTATTATTGTC+TGG - chr1_2:38552915-38552934 Msa0069600:CDS 25.0%
! AATGCTATGTCTTTCAAAAA+TGG + chr1_2:38553116-38553135 None:intergenic 25.0%
! AATGCTATGTCTTTCAAAAA+TGG + chr1_2:38553116-38553135 None:intergenic 25.0%
!!! TAGATTGTTTTATCAAGAAC+AGG + chr1_2:38553573-38553592 None:intergenic 25.0%
!!! TAATTCATCGACTCTTTATT+CGG - chr1_2:38553611-38553630 Msa0069600:CDS 25.0%
! AAGAAACATGTAATACACTT+GGG - chr1_2:38553784-38553803 Msa0069600:CDS 25.0%
!!! ATATTCTAAAATTTGTAGGG+TGG - chr1_2:38553872-38553891 Msa0069600:five_prime_UTR 25.0%
! TTACCCCTTTATTGTATATT+TGG - chr1_2:38553914-38553933 Msa0069600:five_prime_UTR 25.0%
! TGGACCAAATATACAATAAA+GGG + chr1_2:38553921-38553940 None:intergenic 25.0%
!! ACATTAATTCATTTTCTCTG+TGG + chr1_2:38553941-38553960 None:intergenic 25.0%
! GCAGAAATAAACTGAATAAA+AGG + chr1_2:38554066-38554085 None:intergenic 25.0%
TTGTTATCTCACACCTTATT+AGG + chr1_2:38549465-38549484 None:intergenic 30.0%
CAATACAACTTCAACTAGTT+TGG + chr1_2:38549509-38549528 None:intergenic 30.0%
TGAAGTTGTATTGAAGCTTA+AGG - chr1_2:38549516-38549535 Msa0069600:three_prime_UTR 30.0%
!!! AGTGTAAGTAGTTTTGTGTA+AGG + chr1_2:38549571-38549590 None:intergenic 30.0%
! TTTTTGTTCAACACTTGAAC+TGG - chr1_2:38549622-38549641 Msa0069600:three_prime_UTR 30.0%
!!! AAAGTGTTGGTTTGTGTTTT+TGG + chr1_2:38549688-38549707 None:intergenic 30.0%
!!! TAAGGTTTTGGATTTGGATT+TGG + chr1_2:38549768-38549787 None:intergenic 30.0%
GGTTCTTTGTATGAGTAAAA+CGG + chr1_2:38549818-38549837 None:intergenic 30.0%
AATTTCTTCAACTCATCACT+CGG + chr1_2:38550104-38550123 None:intergenic 30.0%
! AGGTTGTATCTTTTTGTCAT+TGG - chr1_2:38550193-38550212 Msa0069600:CDS 30.0%
TGCCTTATGATTCTTATGTT+AGG - chr1_2:38550255-38550274 Msa0069600:CDS 30.0%
! ATTTTTGATGCTGATGATAG+AGG - chr1_2:38550323-38550342 Msa0069600:intron 30.0%
! TTTTTGATGCTGATGATAGA+GGG - chr1_2:38550324-38550343 Msa0069600:intron 30.0%
!! CATTTTGATGTTGAATTGGT+TGG - chr1_2:38550374-38550393 Msa0069600:intron 30.0%
GTTAATCCGTATGTTCATTT+CGG - chr1_2:38550458-38550477 Msa0069600:intron 30.0%
TTAATCCGTATGTTCATTTC+GGG - chr1_2:38550459-38550478 Msa0069600:intron 30.0%
TAAAACACAGAATCAACATC+AGG + chr1_2:38550608-38550627 None:intergenic 30.0%
!!! TGATGTTTTGAGAGGTTATT+GGG - chr1_2:38550799-38550818 Msa0069600:intron 30.0%
CTATCATATCTATGAACAGT+AGG + chr1_2:38550872-38550891 None:intergenic 30.0%
CTACTGTTCATAGATATGAT+AGG - chr1_2:38550870-38550889 Msa0069600:intron 30.0%
AAAGATCTTCATGTGAATGT+TGG - chr1_2:38550920-38550939 Msa0069600:intron 30.0%
TGGTCGTTTGATTAAGTATT+TGG - chr1_2:38550940-38550959 Msa0069600:intron 30.0%
!! TGATTAAGTATTTGGTTCTG+TGG - chr1_2:38550948-38550967 Msa0069600:intron 30.0%
TAGATTGTTTGAGAAGATCT+TGG - chr1_2:38550985-38551004 Msa0069600:intron 30.0%
ATCAGATGGAGAAAAACTTT+CGG - chr1_2:38551253-38551272 Msa0069600:CDS 30.0%
!! GTTTTAATAATTGCGGTCTA+TGG - chr1_2:38551526-38551545 Msa0069600:intron 30.0%
!!! GGAATCATGGTTTTAAATTG+TGG + chr1_2:38551617-38551636 None:intergenic 30.0%
!!! TGTTCAGTTTTAGATTCATG+TGG + chr1_2:38551642-38551661 None:intergenic 30.0%
! CATGAATCTAAAACTGAACA+TGG - chr1_2:38551642-38551661 Msa0069600:intron 30.0%
CATTTGATACCAAATTGTGA+AGG + chr1_2:38551670-38551689 None:intergenic 30.0%
TTAGCATATGGTTAAAGTGA+TGG + chr1_2:38551862-38551881 None:intergenic 30.0%
AAATGCTTCACGGTAAAAAT+AGG + chr1_2:38551970-38551989 None:intergenic 30.0%
TGATTGATCATGAAAGGATT+TGG - chr1_2:38552013-38552032 Msa0069600:intron 30.0%
!!! TTTTTTCATTTCCTGTTTCC+AGG - chr1_2:38552216-38552235 Msa0069600:CDS 30.0%
TAAGAATTGTATTATCCTGC+AGG + chr1_2:38552292-38552311 None:intergenic 30.0%
!! TTTCTGTTGACTCAAATTAG+TGG - chr1_2:38552388-38552407 Msa0069600:CDS 30.0%
GAGACAAAATGAAAGTAAGA+AGG + chr1_2:38552492-38552511 None:intergenic 30.0%
GTGAACACAGATAATGAAAT+CGG - chr1_2:38552525-38552544 Msa0069600:CDS 30.0%
! GTTGTTGAAGATTTTGTATG+AGG + chr1_2:38552614-38552633 None:intergenic 30.0%
TTAAATACATTCGTATACGC+AGG - chr1_2:38552960-38552979 Msa0069600:CDS 30.0%
TAAATACATTCGTATACGCA+GGG - chr1_2:38552961-38552980 Msa0069600:CDS 30.0%
CATTAACTCTTAAAACTCCA+CGG - chr1_2:38553132-38553151 Msa0069600:CDS 30.0%
TAAAGAGTCGATGAATTAGT+CGG + chr1_2:38553609-38553628 None:intergenic 30.0%
TTATCAGAATAATGGCTGAA+GGG - chr1_2:38553691-38553710 Msa0069600:CDS 30.0%
CAAGTGTATTACATGTTTCT+TGG + chr1_2:38553785-38553804 None:intergenic 30.0%
CAAGAAACATGTAATACACT+TGG - chr1_2:38553783-38553802 Msa0069600:CDS 30.0%
!!! CACTATTTTTGATTGAGAAG+AGG + chr1_2:38553826-38553845 None:intergenic 30.0%
GGACCAAATATACAATAAAG+GGG + chr1_2:38553920-38553939 None:intergenic 30.0%
GTGGACCAAATATACAATAA+AGG + chr1_2:38553922-38553941 None:intergenic 30.0%
! CCATTGAGAGATTCTTTTTA+CGG - chr1_2:38554032-38554051 Msa0069600:five_prime_UTR 30.0%
TGCATGAAGAACATCTTATA+GGG - chr1_2:38554083-38554102 Msa0069600:five_prime_UTR 30.0%
! TTATAGGGAAACATTGATTG+TGG - chr1_2:38554098-38554117 Msa0069600:five_prime_UTR 30.0%
ATGTGAAACACCACCTAATA+AGG - chr1_2:38549449-38549468 Msa0069600:three_prime_UTR 35.0%
TTATCTCACACCTTATTAGG+TGG + chr1_2:38549462-38549481 None:intergenic 35.0%
AAGGTTGAGGTTACTTGTTT+GGG + chr1_2:38549552-38549571 None:intergenic 35.0%
TAAGGTTGAGGTTACTTGTT+TGG + chr1_2:38549553-38549572 None:intergenic 35.0%
!!! AGTAGTTTTGTGTAAGGTTG+AGG + chr1_2:38549565-38549584 None:intergenic 35.0%
GGATTTGGATTTGGATTTGA+TGG + chr1_2:38549759-38549778 None:intergenic 35.0%
GTATGAGTAAAACGGTTTGT+AGG + chr1_2:38549810-38549829 None:intergenic 35.0%
GTTCTCGAAACAAAGTAAAG+CGG + chr1_2:38549949-38549968 None:intergenic 35.0%
CCATTTCTCCGATAAGAAAT+TGG + chr1_2:38550057-38550076 None:intergenic 35.0%
CCAATTTCTTATCGGAGAAA+TGG - chr1_2:38550054-38550073 Msa0069600:CDS 35.0%
ATTTCTTCAACTCATCACTC+GGG + chr1_2:38550103-38550122 None:intergenic 35.0%
! GAGTGATGAGTTGAAGAAAT+TGG - chr1_2:38550103-38550122 Msa0069600:CDS 35.0%
! TGAGTTGAAGAAATTGGTGA+AGG - chr1_2:38550109-38550128 Msa0069600:CDS 35.0%
AAGAAATTGGTGAAGGTGAA+GGG - chr1_2:38550116-38550135 Msa0069600:CDS 35.0%
ATTGGATGAACAAGCGAATT+TGG - chr1_2:38550211-38550230 Msa0069600:CDS 35.0%
TTGGATGAACAAGCGAATTT+GGG - chr1_2:38550212-38550231 Msa0069600:CDS 35.0%
! TTTTGATGCTGATGATAGAG+GGG - chr1_2:38550325-38550344 Msa0069600:intron 35.0%
GGATTAACAACAGTCCTATT+AGG + chr1_2:38550446-38550465 None:intergenic 35.0%
! TTTTACAAGGAAATCGGGTT+TGG - chr1_2:38550628-38550647 Msa0069600:intron 35.0%
!!! CTGATGTTTTGAGAGGTTAT+TGG - chr1_2:38550798-38550817 Msa0069600:intron 35.0%
!!! GATGTTTTGAGAGGTTATTG+GGG - chr1_2:38550800-38550819 Msa0069600:intron 35.0%
TCATATCTATGAACAGTAGG+TGG + chr1_2:38550869-38550888 None:intergenic 35.0%
TCATAGATATGATAGGGTTG+AGG - chr1_2:38550877-38550896 Msa0069600:intron 35.0%
AGTAAGTTTCACATCCTTGT+CGG + chr1_2:38551047-38551066 None:intergenic 35.0%
TCAGATGGAGAAAAACTTTC+GGG - chr1_2:38551254-38551273 Msa0069600:CDS 35.0%
ATAAAGCAACCTCCATTCAA+GGG + chr1_2:38551326-38551345 None:intergenic 35.0%
! TTGAATGGAGGTTGCTTTAT+GGG - chr1_2:38551326-38551345 Msa0069600:intron 35.0%
!!! CAGAAGTGTCGTTATTTTGT+CGG - chr1_2:38551357-38551376 Msa0069600:intron 35.0%
!! CGTTATTTTGTCGGAAAAGA+AGG - chr1_2:38551366-38551385 Msa0069600:intron 35.0%
TTAATAATTGCGGTCTATGG+CGG - chr1_2:38551529-38551548 Msa0069600:intron 35.0%
!!! CAATTTTGGCTGCAAAATAG+AGG + chr1_2:38551584-38551603 None:intergenic 35.0%
!!! CAGTTTTAGATTCATGTGGA+TGG + chr1_2:38551638-38551657 None:intergenic 35.0%
! GAAAGGATTTGGAATAGAGA+TGG - chr1_2:38552024-38552043 Msa0069600:intron 35.0%
TCATGAAAAGGGAATTGTAG+AGG - chr1_2:38552107-38552126 Msa0069600:intron 35.0%
CATGAAAAGGGAATTGTAGA+GGG - chr1_2:38552108-38552127 Msa0069600:intron 35.0%
!!! AAATATTTTTGGCAGGTACC+TGG + chr1_2:38552237-38552256 None:intergenic 35.0%
! AGAAGGATTTTTATTCCTGC+AGG - chr1_2:38552274-38552293 Msa0069600:CDS 35.0%
CTATTGGAACTTACTACAAG+CGG - chr1_2:38552313-38552332 Msa0069600:CDS 35.0%
CTTATTAGTGATCCACAGTT+TGG + chr1_2:38552345-38552364 None:intergenic 35.0%
CAAACTGTGGATCACTAATA+AGG - chr1_2:38552343-38552362 Msa0069600:CDS 35.0%
ATCATGCAAACACAAGAACT+GGG + chr1_2:38552576-38552595 None:intergenic 35.0%
TATCATGCAAACACAAGAAC+TGG + chr1_2:38552577-38552596 None:intergenic 35.0%
! AAGATTTTGTATGAGGAGGA+GGG + chr1_2:38552607-38552626 None:intergenic 35.0%
! GTTGAAGATTTTGTATGAGG+AGG + chr1_2:38552611-38552630 None:intergenic 35.0%
GGATAATGATTCTGTATCTG+CGG + chr1_2:38552651-38552670 None:intergenic 35.0%
AAATACATTCGTATACGCAG+GGG - chr1_2:38552962-38552981 Msa0069600:CDS 35.0%
TATAAAGGGTCCTCAGAAAA+AGG - chr1_2:38553053-38553072 Msa0069600:CDS 35.0%
! GGAAGAAGTGCGTATAAAAA+GGG - chr1_2:38553078-38553097 Msa0069600:CDS 35.0%
! GGAAGAAGTGCGTATAAAAA+GGG - chr1_2:38553078-38553097 Msa0069600:CDS 35.0%
TAAAACAGAAGACCAAGACT+CGG + chr1_2:38553277-38553296 None:intergenic 35.0%
!!! TCTTGGTCTTCTGTTTTAAC+TGG - chr1_2:38553279-38553298 Msa0069600:CDS 35.0%
!!! CTTGGTCTTCTGTTTTAACT+GGG - chr1_2:38553280-38553299 Msa0069600:CDS 35.0%
!!! TTGGTCTTCTGTTTTAACTG+GGG - chr1_2:38553281-38553300 Msa0069600:CDS 35.0%
!! TAATTGACTTGAAAGTGAGC+TGG + chr1_2:38553369-38553388 None:intergenic 35.0%
! AAATCACTAATTAAGCGCTG+AGG + chr1_2:38553453-38553472 None:intergenic 35.0%
GATTGTCTACTAGGTTAACA+AGG + chr1_2:38553482-38553501 None:intergenic 35.0%
TCCTATGTTCTTTGTCTCAA+TGG - chr1_2:38553527-38553546 Msa0069600:CDS 35.0%
TCCATTGAGACAAAGAACAT+AGG + chr1_2:38553531-38553550 None:intergenic 35.0%
CTTATCAGAATAATGGCTGA+AGG - chr1_2:38553690-38553709 Msa0069600:CDS 35.0%
TATCAGAATAATGGCTGAAG+GGG - chr1_2:38553692-38553711 Msa0069600:CDS 35.0%
CCTTTCAAACCAATTCCATT+AGG + chr1_2:38553725-38553744 None:intergenic 35.0%
!! CCTAATGGAATTGGTTTGAA+AGG - chr1_2:38553722-38553741 Msa0069600:CDS 35.0%
! CTGTTTCTTAATACTAGCTC+AGG - chr1_2:38553751-38553770 Msa0069600:CDS 35.0%
ACTTGGGTAAATCATCTACA+CGG - chr1_2:38553800-38553819 Msa0069600:CDS 35.0%
CCGTAAAAAGAATCTCTCAA+TGG + chr1_2:38554035-38554054 None:intergenic 35.0%
CTGCATGAAGAACATCTTAT+AGG - chr1_2:38554082-38554101 Msa0069600:five_prime_UTR 35.0%
AGGTGTGAGATAACAACAAG+TGG - chr1_2:38549469-38549488 Msa0069600:three_prime_UTR 40.0%
! CAACTTCAACTAGTTTGGTG+TGG + chr1_2:38549504-38549523 None:intergenic 40.0%
TTTGAGCTGAAGAATGCTCT+TGG + chr1_2:38549734-38549753 None:intergenic 40.0%
! AAGATTTTCGGATGCCCATA+CGG + chr1_2:38549850-38549869 None:intergenic 40.0%
! CTTTTCTTCCTACGTAACGT+TGG - chr1_2:38549915-38549934 Msa0069600:CDS 40.0%
GAAGAAATTGGTGAAGGTGA+AGG - chr1_2:38550115-38550134 Msa0069600:CDS 40.0%
TGGATGAACAAGCGAATTTG+GGG - chr1_2:38550213-38550232 Msa0069600:CDS 40.0%
! AACAAGCGAATTTGGGGTTT+AGG - chr1_2:38550219-38550238 Msa0069600:CDS 40.0%
! ACAAGCGAATTTGGGGTTTA+GGG - chr1_2:38550220-38550239 Msa0069600:CDS 40.0%
ATAGAGGGGAAGTGATTGAT+GGG - chr1_2:38550339-38550358 Msa0069600:intron 40.0%
GAAGTGATTGATGGGGATTT+GGG - chr1_2:38550347-38550366 Msa0069600:intron 40.0%
AAGTGATTGATGGGGATTTG+GGG - chr1_2:38550348-38550367 Msa0069600:intron 40.0%
!! GATGTTGAATTGGTTGGTGA+AGG - chr1_2:38550380-38550399 Msa0069600:intron 40.0%
CTTTGCCCGAAATGAACATA+CGG + chr1_2:38550467-38550486 None:intergenic 40.0%
TGTTCATTTCGGGCAAAGAT+CGG - chr1_2:38550469-38550488 Msa0069600:intron 40.0%
! ATCTCACCCACATTTTCCAA+CGG + chr1_2:38550512-38550531 None:intergenic 40.0%
TTGGAAAATGTGGGTGAGAT+TGG - chr1_2:38550512-38550531 Msa0069600:intron 40.0%
TGGAAAATGTGGGTGAGATT+GGG - chr1_2:38550513-38550532 Msa0069600:intron 40.0%
! GCATGAAGAGTTTTACACTC+AGG - chr1_2:38550535-38550554 Msa0069600:intron 40.0%
! GAGTTTTACACTCAGGTGTT+TGG - chr1_2:38550542-38550561 Msa0069600:intron 40.0%
! TTTTACACTCAGGTGTTTGG+TGG - chr1_2:38550545-38550564 Msa0069600:intron 40.0%
TTTACACTCAGGTGTTTGGT+GGG - chr1_2:38550546-38550565 Msa0069600:intron 40.0%
TGGGAAACAGTTTATTCAGC+AGG - chr1_2:38550565-38550584 Msa0069600:intron 40.0%
GGGAAACAGTTTATTCAGCA+GGG - chr1_2:38550566-38550585 Msa0069600:intron 40.0%
GGAAACAGTTTATTCAGCAG+GGG - chr1_2:38550567-38550586 Msa0069600:intron 40.0%
!! TGTATCATTCGCCTGCTTTT+TGG - chr1_2:38550738-38550757 Msa0069600:intron 40.0%
!!! GTATCATTCGCCTGCTTTTT+GGG - chr1_2:38550739-38550758 Msa0069600:intron 40.0%
!! TTTTTGGGCTTTGATGCTTC+CGG - chr1_2:38550754-38550773 Msa0069600:intron 40.0%
!! ATGGCTTCTGATGTTTTGAG+AGG - chr1_2:38550791-38550810 Msa0069600:intron 40.0%
AGATCTTTCTCCTCCGAAAA+GGG + chr1_2:38550908-38550927 None:intergenic 40.0%
AAGATCTTTCTCCTCCGAAA+AGG + chr1_2:38550909-38550928 None:intergenic 40.0%
!! GTATTTGGTTCTGTGGAGAT+CGG - chr1_2:38550955-38550974 Msa0069600:intron 40.0%
CTTGGATTTGAGCTATGCAA+TGG - chr1_2:38551003-38551022 Msa0069600:intron 40.0%
TAACAAATCCTGAAGCCAAG+CGG + chr1_2:38551071-38551090 None:intergenic 40.0%
!! CTTCAGGATTTGTTAGCTGT+TGG - chr1_2:38551076-38551095 Msa0069600:intron 40.0%
! AGTTCCAAAGACATTAGCCT+TGG + chr1_2:38551112-38551131 None:intergenic 40.0%
!! AGGCTAATGTCTTTGGAACT+TGG - chr1_2:38551112-38551131 Msa0069600:intron 40.0%
CATAAAGCAACCTCCATTCA+AGG + chr1_2:38551327-38551346 None:intergenic 40.0%
! CTTGAATGGAGGTTGCTTTA+TGG - chr1_2:38551325-38551344 Msa0069600:intron 40.0%
!! GGATGTAGATCTTGTTGTTC+AGG - chr1_2:38551387-38551406 Msa0069600:intron 40.0%
!! TGTAGATCTTGTTGTTCAGG+AGG - chr1_2:38551390-38551409 Msa0069600:intron 40.0%
ACTTGTATGCTTGGTCCAAA+TGG + chr1_2:38551417-38551436 None:intergenic 40.0%
ACTAAGCTGCGTATTAGTGA+TGG - chr1_2:38551492-38551511 Msa0069600:intron 40.0%
GATTCATGTGGATGGAATCA+TGG + chr1_2:38551630-38551649 None:intergenic 40.0%
AACATGGACCCTTCACAATT+TGG - chr1_2:38551658-38551677 Msa0069600:intron 40.0%
TTATGGGCAATAGAAGACTG+AGG - chr1_2:38551692-38551711 Msa0069600:intron 40.0%
TCTTCCAAAGTTTCCATTGG+TGG + chr1_2:38551925-38551944 None:intergenic 40.0%
TGCTCTTCCAAAGTTTCCAT+TGG + chr1_2:38551928-38551947 None:intergenic 40.0%
AAAAGGGAATTGTAGAGGGA+AGG - chr1_2:38552112-38552131 Msa0069600:intron 40.0%
GATCAATTTAGCAGTGCAGA+AGG - chr1_2:38552257-38552276 Msa0069600:CDS 40.0%
AAGCGGATAAAACCAAACTG+TGG - chr1_2:38552330-38552349 Msa0069600:CDS 40.0%
! AGATTTTGTATGAGGAGGAG+GGG + chr1_2:38552606-38552625 None:intergenic 40.0%
! GAAGATTTTGTATGAGGAGG+AGG + chr1_2:38552608-38552627 None:intergenic 40.0%
TAGTGCTCATTTAGGGACAA+AGG + chr1_2:38552852-38552871 None:intergenic 40.0%
! CGGAAGAAGTGCGTATAAAA+AGG - chr1_2:38553077-38553096 Msa0069600:CDS 40.0%
GTGCGTATAAAAAGGGATAG+AGG - chr1_2:38553085-38553104 Msa0069600:CDS 40.0%
! TTTTATACGCACTTCTTCCG+TGG + chr1_2:38553077-38553096 None:intergenic 40.0%
! CGGAAGAAGTGCGTATAAAA+AGG - chr1_2:38553077-38553096 Msa0069600:CDS 40.0%
GTGCGTATAAAAAGGGATAG+AGG - chr1_2:38553085-38553104 Msa0069600:CDS 40.0%
AGAGGGAAAATGAAAGCTAG+TGG + chr1_2:38553227-38553246 None:intergenic 40.0%
! CTTTCATTTTCCCTCTCTGA+CGG - chr1_2:38553231-38553250 Msa0069600:CDS 40.0%
AAAACAGAAGACCAAGACTC+GGG + chr1_2:38553276-38553295 None:intergenic 40.0%
! TGCTTGTTGAGATAACCAGT+CGG + chr1_2:38553316-38553335 None:intergenic 40.0%
GTTATCTCAACAAGCAAGCA+TGG - chr1_2:38553320-38553339 Msa0069600:CDS 40.0%
ACAAGCAAGCATGGTACAAA+AGG - chr1_2:38553329-38553348 Msa0069600:CDS 40.0%
TCTCAGAACTGCATAACAAG+AGG + chr1_2:38553419-38553438 None:intergenic 40.0%
GGATCTCTAGATTGTCTACT+AGG + chr1_2:38553491-38553510 None:intergenic 40.0%
CAATCTAGAGATCCATCAGA+AGG - chr1_2:38553497-38553516 Msa0069600:CDS 40.0%
TAGGAATTGCAACCTTCTGA+TGG + chr1_2:38553512-38553531 None:intergenic 40.0%
CAAACCAATTCCATTAGGAG+TGG + chr1_2:38553720-38553739 None:intergenic 40.0%
!! CTTCAACTAGTTTGGTGTGG+TGG + chr1_2:38549501-38549520 None:intergenic 45.0%
GGTTACTTGTTTGGGTGTGT+CGG + chr1_2:38549544-38549563 None:intergenic 45.0%
TTTCTGTCTCTCTGTCTGTG+TGG - chr1_2:38549592-38549611 Msa0069600:three_prime_UTR 45.0%
GGTTACGACGAGAAGAATGA+CGG + chr1_2:38549886-38549905 None:intergenic 45.0%
!! TAGGAAGAAAAGTGCTGCGA+CGG + chr1_2:38549907-38549926 None:intergenic 45.0%
CTCGAAACAAAGTAAAGCGG+CGG + chr1_2:38549946-38549965 None:intergenic 45.0%
! ATTTTGTTCCAATCGACGCG+TGG + chr1_2:38550002-38550021 None:intergenic 45.0%
CAATCGCCGATAGAAATTCG+CGG - chr1_2:38550027-38550046 Msa0069600:CDS 45.0%
GCGGTACGCCAATTTCTTAT+CGG - chr1_2:38550046-38550065 Msa0069600:CDS 45.0%
CTTATCGGAGAAATGGATCG+TGG - chr1_2:38550061-38550080 Msa0069600:CDS 45.0%
GGAGAAATGGATCGTGGTTT+CGG - chr1_2:38550067-38550086 Msa0069600:CDS 45.0%
ATGGATCGTGGTTTCGGTTT+CGG - chr1_2:38550073-38550092 Msa0069600:CDS 45.0%
AATTGGTGAAGGTGAAGGGT+TGG - chr1_2:38550120-38550139 Msa0069600:CDS 45.0%
! GATTGGTGATTCGAGAACTC+CGG - chr1_2:38550154-38550173 Msa0069600:CDS 45.0%
GATAGAGGGGAAGTGATTGA+TGG - chr1_2:38550338-38550357 Msa0069600:intron 45.0%
TAGAGGGGAAGTGATTGATG+GGG - chr1_2:38550340-38550359 Msa0069600:intron 45.0%
GGAAGTGATTGATGGGGATT+TGG - chr1_2:38550346-38550365 Msa0069600:intron 45.0%
!! AATTGGTTGGTGAAGGTGCT+AGG - chr1_2:38550387-38550406 Msa0069600:intron 45.0%
ATTTCGGGCAAAGATCGGTT+TGG - chr1_2:38550474-38550493 Msa0069600:intron 45.0%
! TTTTCCAACGGCAAACCTCT+CGG + chr1_2:38550500-38550519 None:intergenic 45.0%
AGGTTTGCCGTTGGAAAATG+TGG - chr1_2:38550502-38550521 Msa0069600:intron 45.0%
GGTTTGCCGTTGGAAAATGT+GGG - chr1_2:38550503-38550522 Msa0069600:intron 45.0%
ATTCAGCAGGGGATTTCGAA+TGG - chr1_2:38550578-38550597 Msa0069600:intron 45.0%
ATTTGATAAGCATGCGCCGA+AGG - chr1_2:38550667-38550686 Msa0069600:intron 45.0%
AGCATCAAAGCCCAAAAAGC+AGG + chr1_2:38550752-38550771 None:intergenic 45.0%
! GGTTGAGGCTTATCCCTTTT+CGG - chr1_2:38550892-38550911 Msa0069600:intron 45.0%
TTTGAGCTATGCAATGGCAG+AGG - chr1_2:38551009-38551028 Msa0069600:intron 45.0%
ATGTGAAACTTACTGCCGCT+TGG - chr1_2:38551053-38551072 Msa0069600:intron 45.0%
TTTGTGGGATAAACTCCCTC+TGG + chr1_2:38551168-38551187 None:intergenic 45.0%
! GAACAGACGGCAACTTTTGT+GGG + chr1_2:38551183-38551202 None:intergenic 45.0%
! TGAACAGACGGCAACTTTTG+TGG + chr1_2:38551184-38551203 None:intergenic 45.0%
AAGTTGCCGTCTGTTCATCT+TGG - chr1_2:38551187-38551206 Msa0069600:intron 45.0%
AGTTGCCGTCTGTTCATCTT+GGG - chr1_2:38551188-38551207 Msa0069600:intron 45.0%
TCAACCCCAAGATGAACAGA+CGG + chr1_2:38551196-38551215 None:intergenic 45.0%
CATCTTGGGGTTGAAGAAAC+AGG - chr1_2:38551202-38551221 Msa0069600:intron 45.0%
TGTTGTTCAGGAGGTCCATT+TGG - chr1_2:38551399-38551418 Msa0069600:intron 45.0%
ACAGGGCTTACTTGTATGCT+TGG + chr1_2:38551426-38551445 None:intergenic 45.0%
!! GGATTTTGATGTCGCTGCAA+TGG + chr1_2:38551563-38551582 None:intergenic 45.0%
TGCAGCCAAAATTGCAGTTG+TGG - chr1_2:38551590-38551609 Msa0069600:intron 45.0%
! GTGGTCCACAACTGCAATTT+TGG + chr1_2:38551598-38551617 None:intergenic 45.0%
ACAACATGACTCACCACCAA+TGG - chr1_2:38551909-38551928 Msa0069600:intron 45.0%
CTCACCACCAATGGAAACTT+TGG - chr1_2:38551918-38551937 Msa0069600:intron 45.0%
GTGGATACTTAGCTCCTGTT+TGG - chr1_2:38552407-38552426 Msa0069600:CDS 45.0%
! CACAAGAACTGGGCTTGTTT+GGG + chr1_2:38552566-38552585 None:intergenic 45.0%
! ACACAAGAACTGGGCTTGTT+TGG + chr1_2:38552567-38552586 None:intergenic 45.0%
!!! CGTATACGCAGGGGTATTTT+AGG - chr1_2:38552971-38552990 Msa0069600:CDS 45.0%
AAGGGTCCTCAGAAAAAGGA+CGG - chr1_2:38553057-38553076 Msa0069600:CDS 45.0%
! CTTCTTCCGTCCTTTTTCTG+AGG + chr1_2:38553066-38553085 None:intergenic 45.0%
AGAGTCGATGAATTAGTCGG+AGG + chr1_2:38553606-38553625 None:intergenic 45.0%
TGCTCACTTGATACACTCCA+TGG + chr1_2:38553657-38553676 None:intergenic 45.0%
GGATCCACTCCTAATGGAAT+TGG - chr1_2:38553713-38553732 Msa0069600:CDS 45.0%
AGAACCTCGACTTCTCCGTA+TGG - chr1_2:38549832-38549851 Msa0069600:exon 50.0%
GAACCTCGACTTCTCCGTAT+GGG - chr1_2:38549833-38549852 Msa0069600:CDS 50.0%
CGCGAATTTCTATCGGCGAT+TGG + chr1_2:38550029-38550048 None:intergenic 50.0%
GGCGTACCGCGAATTTCTAT+CGG + chr1_2:38550036-38550055 None:intergenic 50.0%
TGGATCGTGGTTTCGGTTTC+GGG - chr1_2:38550074-38550093 Msa0069600:CDS 50.0%
CCTTTCAAACTCCAATCCGC+CGG + chr1_2:38550176-38550195 None:intergenic 50.0%
CCTTGAGGCAATGCAACCTT+CGG + chr1_2:38550686-38550705 None:intergenic 50.0%
! GGCTTTGATGCTTCCGGTTT+CGG - chr1_2:38550760-38550779 Msa0069600:intron 50.0%
TGCTTCCGGTTTCGGTTAGT+AGG - chr1_2:38550768-38550787 Msa0069600:intron 50.0%
TCCGGTTTCGGTTAGTAGGA+TGG - chr1_2:38550772-38550791 Msa0069600:intron 50.0%
GCCATCCTACTAACCGAAAC+CGG + chr1_2:38550776-38550795 None:intergenic 50.0%
TGAGAGGTTATTGGGGACAG+AGG - chr1_2:38550807-38550826 Msa0069600:intron 50.0%
ATTGGGGACAGAGGCTTCTT+TGG - chr1_2:38550816-38550835 Msa0069600:intron 50.0%
TTGGGGACAGAGGCTTCTTT+GGG - chr1_2:38550817-38550836 Msa0069600:intron 50.0%
! CAGAGGCTTCTTTGGGAAGT+TGG - chr1_2:38550824-38550843 Msa0069600:intron 50.0%
! AGGCTTCTTTGGGAAGTTGG+TGG - chr1_2:38550827-38550846 Msa0069600:intron 50.0%
! TGAGGCTTATCCCTTTTCGG+AGG - chr1_2:38550895-38550914 Msa0069600:intron 50.0%
AGCTATGCAATGGCAGAGGA+GGG - chr1_2:38551013-38551032 Msa0069600:intron 50.0%
! CAATGGCAGAGGAGGGTTTT+TGG - chr1_2:38551020-38551039 Msa0069600:intron 50.0%
! CTGTTGGTTATCAGCAGCCA+AGG - chr1_2:38551092-38551111 Msa0069600:intron 50.0%
GCAGCCAAGGCTAATGTCTT+TGG - chr1_2:38551105-38551124 Msa0069600:intron 50.0%
GTTGCCGTCTGTTCATCTTG+GGG - chr1_2:38551189-38551208 Msa0069600:intron 50.0%
GTGCTCATCATGCATTGCAG+CGG - chr1_2:38551283-38551302 Msa0069600:CDS 50.0%
TGCTCATCATGCATTGCAGC+GGG - chr1_2:38551284-38551303 Msa0069600:CDS 50.0%
TTTGGCAGGTACCTGGAAAC+AGG + chr1_2:38552230-38552249 None:intergenic 50.0%
!! TCCCTCTCTGACGGATTCAT+TGG - chr1_2:38553240-38553259 Msa0069600:CDS 50.0%
CCCAATGAATCCGTCAGAGA+GGG + chr1_2:38553244-38553263 None:intergenic 50.0%
!! CCCTCTCTGACGGATTCATT+GGG - chr1_2:38553241-38553260 Msa0069600:CDS 50.0%
TCCCAATGAATCCGTCAGAG+AGG + chr1_2:38553245-38553264 None:intergenic 50.0%
!! TGACGGATTCATTGGGATCC+AGG - chr1_2:38553248-38553267 Msa0069600:CDS 50.0%
AAGTCCCTGCTGTTCATCCA+TGG - chr1_2:38553637-38553656 Msa0069600:CDS 50.0%
CACTCCATGGATGAACAGCA+GGG + chr1_2:38553644-38553663 None:intergenic 50.0%
ACACTCCATGGATGAACAGC+AGG + chr1_2:38553645-38553664 None:intergenic 50.0%
TGAAGGGGATCCACTCCTAA+TGG - chr1_2:38553707-38553726 Msa0069600:CDS 50.0%
ATGCCCATACGGAGAAGTCG+AGG + chr1_2:38549839-38549858 None:intergenic 55.0%
! TCGAGTATCCACGCGTCGAT+TGG - chr1_2:38549991-38550010 Msa0069600:CDS 55.0%
TGGTGATTCGAGAACTCCGG+CGG - chr1_2:38550157-38550176 Msa0069600:CDS 55.0%
ATTCGAGAACTCCGGCGGAT+TGG - chr1_2:38550162-38550181 Msa0069600:CDS 55.0%
!! CCGGCGGATTGGAGTTTGAA+AGG - chr1_2:38550173-38550192 Msa0069600:CDS 55.0%
!! TGGTGAAGGTGCTAGGCAAG+AGG - chr1_2:38550394-38550413 Msa0069600:intron 55.0%
!! CAAAGATCGGTTTGGCCGAG+AGG - chr1_2:38550482-38550501 Msa0069600:intron 55.0%
CCGAAGGTTGCATTGCCTCA+AGG - chr1_2:38550683-38550702 Msa0069600:intron 55.0%
! GCCTCAAGGTGTGATGATGC+CGG - chr1_2:38550697-38550716 Msa0069600:intron 55.0%
ACCGGCATCATCACACCTTG+AGG + chr1_2:38550701-38550720 None:intergenic 55.0%
GAGCTATGCAATGGCAGAGG+AGG - chr1_2:38551012-38551031 Msa0069600:intron 55.0%
!! GGAGGGTTTTTGGACCGACA+AGG - chr1_2:38551030-38551049 Msa0069600:intron 55.0%
! ACTTACTGCCGCTTGGCTTC+AGG - chr1_2:38551060-38551079 Msa0069600:intron 55.0%
GGTCGTCCGAGAGCAAACAT+TGG - chr1_2:38551133-38551152 Msa0069600:intron 55.0%
CCGTCGCCAATGTTTGCTCT+CGG + chr1_2:38551142-38551161 None:intergenic 55.0%
CCGAGAGCAAACATTGGCGA+CGG - chr1_2:38551139-38551158 Msa0069600:intron 55.0%
TTGAACGCACGGCCCTTGAA+TGG - chr1_2:38551311-38551330 Msa0069600:CDS 55.0%
AAGACCAAGACTCGGGTACC+TGG + chr1_2:38553269-38553288 None:intergenic 55.0%
!! CGGTGTCGCCAACGTTACGT+AGG + chr1_2:38549926-38549945 None:intergenic 60.0%
! GGTGAAGGTGAAGGGTTGGC+AGG - chr1_2:38550124-38550143 Msa0069600:CDS 60.0%
! GGTGAAGGGTTGGCAGGTTG+TGG - chr1_2:38550130-38550149 Msa0069600:CDS 60.0%
GGTTGGCAGGTTGTGGCGAT+TGG - chr1_2:38550137-38550156 Msa0069600:CDS 60.0%
TTGGCCGAGAGGTTTGCCGT+TGG - chr1_2:38550493-38550512 Msa0069600:intron 60.0%
ACATTGGCGACGGAGACCAG+AGG - chr1_2:38551149-38551168 Msa0069600:intron 60.0%
CATTGGCGACGGAGACCAGA+GGG - chr1_2:38551150-38551169 Msa0069600:intron 60.0%
TCAAGGGCCGTGCGTTCAAC+AGG + chr1_2:38551310-38551329 None:intergenic 60.0%
AACGCACGGCCCTTGAATGG+AGG - chr1_2:38551314-38551333 Msa0069600:CDS 60.0%
GGATCCAGGTACCCGAGTCT+TGG - chr1_2:38553262-38553281 Msa0069600:CDS 60.0%
CTGGGGACAACAATGCCGAC+TGG - chr1_2:38553298-38553317 Msa0069600:CDS 60.0%
CAGCGGGCCTGTTGAACGCA+CGG - chr1_2:38551300-38551319 Msa0069600:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 38549438 38554135 38549438 ID=Msa0069600;Name=Msa0069600
chr1_2 mRNA 38549438 38554135 38549438 ID=Msa0069600-mRNA-1;Parent=Msa0069600;Name=Msa0069600-mRNA-1;_AED=0.00;_eAED=0.00;_QI=285|1|1|1|1|1|3|395|769
chr1_2 exon 38549438 38550303 38549438 ID=Msa0069600-mRNA-1:exon:12025;Parent=Msa0069600-mRNA-1
chr1_2 exon 38551209 38551335 38551209 ID=Msa0069600-mRNA-1:exon:12024;Parent=Msa0069600-mRNA-1
chr1_2 exon 38552139 38554135 38552139 ID=Msa0069600-mRNA-1:exon:12023;Parent=Msa0069600-mRNA-1
chr1_2 five_prime_UTR 38553851 38554135 38553851 ID=Msa0069600-mRNA-1:five_prime_utr;Parent=Msa0069600-mRNA-1
chr1_2 CDS 38552139 38553850 38552139 ID=Msa0069600-mRNA-1:cds;Parent=Msa0069600-mRNA-1
chr1_2 CDS 38551209 38551335 38551209 ID=Msa0069600-mRNA-1:cds;Parent=Msa0069600-mRNA-1
chr1_2 CDS 38549833 38550303 38549833 ID=Msa0069600-mRNA-1:cds;Parent=Msa0069600-mRNA-1
chr1_2 three_prime_UTR 38549438 38549832 38549438 ID=Msa0069600-mRNA-1:three_prime_utr;Parent=Msa0069600-mRNA-1
Gene Sequence

>Msa0069600

ATGTTGGTCCAAGAGCATTCTTCAGCTCAAAAACCATCAAATCCAAATCCAAATCCAAAACCTTATTTGAAAAAAAGTGATCTTCCTACAAACCGTTTTACTCATACAAAGAACCTCGACTTCTCCGTATGGGCATCCGAAAATCTTTACAAAATTGTTTCCGTCATTCTTCTCGTCGTAACCGTCGCAGCACTTTTCTTCCTACGTAACGTTGGCGACACCGCCGCTTTACTTTGTTTCGAGAACAAAGCGCGTGATCTCGAGAAGATCGAGTATCCACGCGTCGATTGGAACAAAATCACACCAATCGCCGATAGAAATTCGCGGTACGCCAATTTCTTATCGGAGAAATGGATCGTGGTTTCGGTTTCGGGTTACCCGAGTGATGAGTTGAAGAAATTGGTGAAGGTGAAGGGTTGGCAGGTTGTGGCGATTGGTGATTCGAGAACTCCGGCGGATTGGAGTTTGAAAGGTTGTATCTTTTTGTCATTGGATGAACAAGCGAATTTGGGGTTTAGGGTTGTTGATTATTTGCCTTATGATTCTTATGTTAGGAAAATTGTTGGGTATTTGTTTGCAATTCAACATGGTGCTAAGAAGATTTTTGATGCTGATGATAGAGGGGAAGTGATTGATGGGGATTTGGGGAAACATTTTGATGTTGAATTGGTTGGTGAAGGTGCTAGGCAAGAGGTTTTGTTGCAGTATAGTCATGATAATCCTAATAGGACTGTTGTTAATCCGTATGTTCATTTCGGGCAAAGATCGGTTTGGCCGAGAGGTTTGCCGTTGGAAAATGTGGGTGAGATTGGGCATGAAGAGTTTTACACTCAGGTGTTTGGTGGGAAACAGTTTATTCAGCAGGGGATTTCGAATGGATTGCCTGATGTTGATTCTGTGTTTTATTTTACAAGGAAATCGGGTTTGGAACCGTTTGATATTCGATTTGATAAGCATGCGCCGAAGGTTGCATTGCCTCAAGGTGTGATGATGCCGGTTAATTCATTTAATACGATGTATCATTCGCCTGCTTTTTGGGCTTTGATGCTTCCGGTTTCGGTTAGTAGGATGGCTTCTGATGTTTTGAGAGGTTATTGGGGACAGAGGCTTCTTTGGGAAGTTGGTGGTTATGTTGCTGTTTATCCACCTACTGTTCATAGATATGATAGGGTTGAGGCTTATCCCTTTTCGGAGGAGAAAGATCTTCATGTGAATGTTGGTCGTTTGATTAAGTATTTGGTTCTGTGGAGATCGGATAAGCATAGATTGTTTGAGAAGATCTTGGATTTGAGCTATGCAATGGCAGAGGAGGGTTTTTGGACCGACAAGGATGTGAAACTTACTGCCGCTTGGCTTCAGGATTTGTTAGCTGTTGGTTATCAGCAGCCAAGGCTAATGTCTTTGGAACTTGGTCGTCCGAGAGCAAACATTGGCGACGGAGACCAGAGGGAGTTTATCCCACAAAAGTTGCCGTCTGTTCATCTTGGGGTTGAAGAAACAGGAACTGTGAATTATGAGATTGCTAATTTAATCAGATGGAGAAAAACTTTCGGGAATGTTGTGCTCATCATGCATTGCAGCGGGCCTGTTGAACGCACGGCCCTTGAATGGAGGTTGCTTTATGGGAGAATATTCAGAAGTGTCGTTATTTTGTCGGAAAAGAAGGATGTAGATCTTGTTGTTCAGGAGGTCCATTTGGACCAAGCATACAAGTACCTGCCAAAAATATTTGATCAATTTAGCAGTGCAGAAGGATTTTTATTCCTGCAGGATAATACAATTCTTAACTATTGGAACTTACTACAAGCGGATAAAACCAAACTGTGGATCACTAATAAGGTACCCGAGTCTTGGTCTTCTGTTTTAACTGGGGACAACAATGCCGACTGGTTATCTCAACAAGCAAGCATGGTACAAAAGGTTGTTAGCATGATGCCAGCTCACTTTCAAGTCAATTACAAAGACACAAGTAACAATGACAAGAACCTCTTGTTATGCAGTTCTGAGATATTCTATGTTCCTCAGCGCTTAATTAGTGATTTCGTTGACCTTGTTAACCTAGTAGACAATCTAGAGATCCATCAGAAGGTTGCAATTCCTATGTTCTTTGTCTCAATGGATTCTACACAGAATTTTGATCCTGTTCTTGATAAAACAATCTACAAGCAAGCTCCTCCGACTAATTCATCGACTCTTTATTCGGCTAAAGTCCCTGCTGTTCATCCATGGAGTGTATCAAGTGAGCAAGAATTTATTAAGCTTATCAGAATAATGGCTGAAGGGGATCCACTCCTAATGGAATTGGTTTGA
Protein sequence

>Msa0069600

MLVQEHSSAQKPSNPNPNPKPYLKKSDLPTNRFTHTKNLDFSVWASENLYKIVSVILLVVTVAALFFLRNVGDTAALLCFENKARDLEKIEYPRVDWNKITPIADRNSRYANFLSEKWIVVSVSGYPSDELKKLVKVKGWQVVAIGDSRTPADWSLKGCIFLSLDEQANLGFRVVDYLPYDSYVRKIVGYLFAIQHGAKKIFDADDRGEVIDGDLGKHFDVELVGEGARQEVLLQYSHDNPNRTVVNPYVHFGQRSVWPRGLPLENVGEIGHEEFYTQVFGGKQFIQQGISNGLPDVDSVFYFTRKSGLEPFDIRFDKHAPKVALPQGVMMPVNSFNTMYHSPAFWALMLPVSVSRMASDVLRGYWGQRLLWEVGGYVAVYPPTVHRYDRVEAYPFSEEKDLHVNVGRLIKYLVLWRSDKHRLFEKILDLSYAMAEEGFWTDKDVKLTAAWLQDLLAVGYQQPRLMSLELGRPRANIGDGDQREFIPQKLPSVHLGVEETGTVNYEIANLIRWRKTFGNVVLIMHCSGPVERTALEWRLLYGRIFRSVVILSEKKDVDLVVQEVHLDQAYKYLPKIFDQFSSAEGFLFLQDNTILNYWNLLQADKTKLWITNKVPESWSSVLTGDNNADWLSQQASMVQKVVSMMPAHFQVNYKDTSNNDKNLLLCSSEIFYVPQRLISDFVDLVNLVDNLEIHQKVAIPMFFVSMDSTQNFDPVLDKTIYKQAPPTNSSTLYSAKVPAVHPWSVSSEQEFIKLIRIMAEGDPLLMELV*