AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0898660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0898660 MtrunA17_Chr6g0484301 97.406 694 17 1 1 694 1 693 0.0 1385
Msa0898660 MtrunA17_Chr1g0212431 43.977 689 346 7 39 694 53 734 0.0 549
Msa0898660 MtrunA17_Chr7g0253851 33.186 678 393 15 48 684 5 663 1.33e-105 336
Msa0898660 MtrunA17_Chr2g0278061 32.759 638 365 17 92 682 153 773 2.03e-83 280
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0898660 AT1G48840.1 64.740 692 238 6 4 693 2 689 0.0 912
Msa0898660 AT3G18350.3 63.120 686 248 4 4 687 2 684 0.0 881
Msa0898660 AT3G18350.1 63.120 686 248 4 4 687 2 684 0.0 881
Msa0898660 AT3G18350.2 63.120 686 248 4 4 687 2 684 0.0 881
Msa0898660 AT5G23390.1 42.580 721 375 6 9 694 13 729 0.0 536
Msa0898660 AT2G21720.2 30.000 680 421 14 48 684 64 731 5.33e-93 305
Msa0898660 AT2G21720.1 29.985 677 422 14 48 684 64 728 1.66e-92 303
Msa0898660 AT1G71240.2 30.638 705 421 21 32 682 105 795 3.34e-78 267
Msa0898660 AT1G71240.1 31.763 658 388 19 73 682 152 796 4.38e-78 266
Msa0898660 AT1G71240.3 30.700 557 322 20 32 538 105 647 3.33e-51 189

Find 177 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCAATCTTTGCTAAAT+TGG 0.125465 6_1:+93112121 Msa0898660:CDS
ATTTCAAACATTCCTATATA+TGG 0.166206 6_1:-93113885 None:intergenic
GATGATCCATTGAAGTCTTC+TGG 0.177764 6_1:+93112144 Msa0898660:CDS
CTGGATTCTGTCTGTGAAAA+AGG 0.178729 6_1:+93105609 Msa0898660:five_prime_UTR
ACCGAGGTACTTATCATATA+TGG 0.211443 6_1:-93108868 None:intergenic
ATAAGCAAGTTTGGAATTAA+AGG 0.213432 6_1:+93109977 Msa0898660:CDS
TCTAACTTAGGATTCGTATT+TGG 0.219684 6_1:+93110250 Msa0898660:CDS
CACACGCAATCATCAATTTC+TGG 0.221655 6_1:+93105590 Msa0898660:five_prime_UTR
CACAAATTTATAAGCAAGTT+TGG 0.224728 6_1:+93109968 Msa0898660:CDS
CTGGAATTTCCTGAGCTTAA+AGG 0.228580 6_1:+93109893 Msa0898660:CDS
TGATGGTATCGACACTAATT+TGG 0.238972 6_1:+93110423 Msa0898660:CDS
CATATCGTGATGGATTCTTT+AGG 0.244347 6_1:-93107832 None:intergenic
GACATGCTCGTCGTGATTAT+TGG 0.260318 6_1:+93109915 Msa0898660:CDS
CCCCATGGTCCAGTCAATTC+AGG 0.279993 6_1:-93109726 None:intergenic
ATAAAATTCTAGGAATTTCT+TGG 0.284887 6_1:-93113963 None:intergenic
ACGATATGCAAGGAACTTAT+TGG 0.293732 6_1:+93107847 Msa0898660:CDS
TTATCTCTTTCCAGTTTAAC+AGG 0.295578 6_1:-93113630 None:intergenic
TAAAAGATGGATCACTTAAA+TGG 0.300961 6_1:+93107443 Msa0898660:CDS
AGTGATGATGGCGAAATCTT+TGG 0.310756 6_1:+93113670 Msa0898660:exon
AATTTATGTGATCAGCTTCC+AGG 0.314602 6_1:+93110112 Msa0898660:CDS
CTCTCTGTGCTAGCTTTCCT+TGG 0.318234 6_1:-93113561 None:intergenic
GACCTCTTCAAGTGATCTTC+AGG 0.321451 6_1:+93107781 Msa0898660:CDS
ATATCGTGATGGATTCTTTA+GGG 0.321662 6_1:-93107831 None:intergenic
ACCAGCTGCTCCTGTTAAAC+TGG 0.336451 6_1:+93113620 Msa0898660:CDS
TCTATCGGCAGGATTGGTTT+TGG 0.337647 6_1:+93113473 Msa0898660:CDS
TCTTCAATCTTTGCTAAATT+GGG 0.343179 6_1:+93112122 Msa0898660:CDS
ATAGAATACATTCCACTTGC+AGG 0.345829 6_1:-93110208 None:intergenic
TGTTCTTCGGTTACATCATC+TGG 0.349941 6_1:+93112175 Msa0898660:CDS
AGTTGTTCCATTGTATTCAT+TGG 0.355205 6_1:-93112804 None:intergenic
TAAGCAAGTTTGGAATTAAA+GGG 0.358316 6_1:+93109978 Msa0898660:CDS
CATCCAAGATATCAGTTCTC+TGG 0.363281 6_1:+93110057 Msa0898660:CDS
CATCTTGACAAGATAGTAGT+AGG 0.366864 6_1:+93107367 Msa0898660:five_prime_UTR
TGTTGGAGAAACGACTTTGT+TGG 0.374602 6_1:+93110324 Msa0898660:CDS
ATGATCCATTGAAGTCTTCT+GGG 0.375673 6_1:+93112145 Msa0898660:CDS
AATAATGACGTTGGCAATGA+TGG 0.389470 6_1:-93108790 None:intergenic
ATACATTCCACTTGCAGGCT+TGG 0.398499 6_1:-93110203 None:intergenic
TAAAATTCTAGGAATTTCTT+GGG 0.407684 6_1:-93113962 None:intergenic
TAGATCAGAACCAGCTGTAC+TGG 0.409211 6_1:+93109874 Msa0898660:intron
CCGAGGTACTTATCATATAT+GGG 0.409489 6_1:-93108867 None:intergenic
TTTCAAACATTCCTATATAT+GGG 0.410356 6_1:-93113884 None:intergenic
TATTATAAATTGCAGGGGTT+GGG 0.412605 6_1:+93112671 Msa0898660:intron
GTTGACGGGGTTAAAGTTGA+TGG 0.413859 6_1:+93110406 Msa0898660:CDS
GAGAAGATTCTTGAGATTGA+TGG 0.415310 6_1:+93109290 Msa0898660:CDS
TCCATTGTATTCATTGGTGG+AGG 0.417119 6_1:-93112798 None:intergenic
TGCTGAAGAATTTGAGGAGA+TGG 0.417912 6_1:+93107489 Msa0898660:CDS
GATCACTTGAAGAGGTCTTA+AGG 0.418496 6_1:-93107775 None:intergenic
AGAAGAGAATCATTCAATAC+AGG 0.423857 6_1:-93110082 None:intergenic
TTGGACACGGTTTCTAACTT+AGG 0.424685 6_1:+93110238 Msa0898660:CDS
GAGGTGCTTACTTTGTCAAC+TGG 0.429289 6_1:+93108828 Msa0898660:CDS
ATTATTGGCTAGCCATCATC+AGG 0.429481 6_1:+93109930 Msa0898660:CDS
GAAAGACTTACATTAGTAAG+AGG 0.432590 6_1:-93107995 None:intergenic
GGGAAAGGAGATTTAGAGAA+TGG 0.436139 6_1:+93113586 Msa0898660:CDS
GGCCCAGAGAACTGATATCT+TGG 0.436221 6_1:-93110060 None:intergenic
TCCCAGCTGTAATTTGAGAT+TGG 0.439481 6_1:-93113848 None:intergenic
TTTATCCTCTAGATGAACTT+AGG 0.443113 6_1:+93112094 Msa0898660:CDS
ATATTTCTTCTCAAGTTTCG+TGG 0.443678 6_1:+93112882 Msa0898660:CDS
ATGGAAAATTCACCTTCTGC+TGG 0.443978 6_1:+93107508 Msa0898660:CDS
CTGAGTCGCTTCCCATATAT+AGG 0.448936 6_1:+93113873 Msa0898660:three_prime_UTR
TCTGTGCTAGCTTTCCTTGG+AGG 0.452362 6_1:-93113558 None:intergenic
GCAACGGAGAAGATGGCATT+TGG 0.458707 6_1:+93113447 Msa0898660:CDS
AATGTATTCTATCTCGGTCT+TGG 0.460063 6_1:+93110219 Msa0898660:CDS
CGGCACAGGCAACAGTTGAC+GGG 0.464197 6_1:+93110392 Msa0898660:CDS
TCATTGAAAGCGCAAATATC+CGG 0.466068 6_1:+93107893 Msa0898660:CDS
CACTAATTTGGCTGTCATGA+AGG 0.468410 6_1:+93110435 Msa0898660:CDS
CATTGTATTCATTGGTGGAG+GGG 0.468825 6_1:-93112796 None:intergenic
CCTACCTTGATTAAAACATC+TGG 0.469406 6_1:-93112748 None:intergenic
AGTAGTAGGTTTAGTAGAGA+TGG 0.470283 6_1:+93107381 Msa0898660:exon
TAGACCTTCAAGCATAGCTC+TGG 0.471427 6_1:-93107419 None:intergenic
ACCTGAATTGACTGGACCAT+GGG 0.472046 6_1:+93109725 Msa0898660:CDS
GTTGTTAAACCTGAATTGAC+TGG 0.473795 6_1:+93109717 Msa0898660:CDS
GTCCAATCTCAAATTACAGC+TGG 0.474978 6_1:+93113846 Msa0898660:three_prime_UTR
GAAAGCTAGCACAGAGAGAT+GGG 0.475632 6_1:+93113566 Msa0898660:CDS
TCCAGTTTAACAGGAGCAGC+TGG 0.478799 6_1:-93113621 None:intergenic
TCAATTCAGGTTTAACAACT+TGG 0.481650 6_1:-93109713 None:intergenic
CCATTGTATTCATTGGTGGA+GGG 0.481765 6_1:-93112797 None:intergenic
TTCTATCTCGGTCTTGGACA+CGG 0.483446 6_1:+93110225 Msa0898660:CDS
TGGTCTTCTATCGGCAGGAT+TGG 0.484707 6_1:+93113467 Msa0898660:CDS
GACTTACATTAGTAAGAGGT+TGG 0.486299 6_1:-93107991 None:intergenic
TGGAATTAAAGGGGTGGCAA+GGG 0.487405 6_1:+93109988 Msa0898660:CDS
AAAACCAGAGCTATGCTTGA+AGG 0.490777 6_1:+93107415 Msa0898660:CDS
GGAAAGCTAGCACAGAGAGA+TGG 0.492039 6_1:+93113565 Msa0898660:CDS
ACATTAATTTCAAATTATCT+CGG 0.493171 6_1:-93113806 None:intergenic
GGATCACTTAAATGGTTGCT+TGG 0.495675 6_1:+93107451 Msa0898660:CDS
GTTGATGAAGAAGTATCTGT+TGG 0.496350 6_1:+93108732 Msa0898660:CDS
CTTGAAGGTCTAGTAAAAGA+TGG 0.497778 6_1:+93107430 Msa0898660:CDS
TGTTCCATTGTATTCATTGG+TGG 0.498386 6_1:-93112801 None:intergenic
CGAACAACTAGGTTTGCAAC+TGG 0.499415 6_1:-93107556 None:intergenic
CAAAACCCAGAAGACTTCAA+TGG 0.500067 6_1:-93112150 None:intergenic
AACGACTTTGTTGGAAAGAG+TGG 0.500119 6_1:+93110333 Msa0898660:CDS
CATATGACATGATGTTAGCT+TGG 0.501629 6_1:+93107948 Msa0898660:CDS
TGGCAAGGGACGAAGCACTT+TGG 0.504419 6_1:+93110002 Msa0898660:CDS
TTGGAATTAAAGGGGTGGCA+AGG 0.508940 6_1:+93109987 Msa0898660:CDS
ATCCAAGATATCAGTTCTCT+GGG 0.510801 6_1:+93110058 Msa0898660:CDS
GCATTTGGTCTTCTATCGGC+AGG 0.511436 6_1:+93113462 Msa0898660:CDS
GACCATCCGTCATAAGTTAG+TGG 0.513575 6_1:+93113783 Msa0898660:three_prime_UTR
ACAAAGAATCTCCCTGATGA+TGG 0.518431 6_1:-93109942 None:intergenic
CTACTACTATCTTGTCAAGA+TGG 0.520468 6_1:-93107366 None:intergenic
TCAGGAAATTCCAGTACAGC+TGG 0.522424 6_1:-93109884 None:intergenic
CAAACAGCTCTGTTGAGAGC+AGG 0.524548 6_1:+93110281 Msa0898660:CDS
TCGGCACAGGCAACAGTTGA+CGG 0.527785 6_1:+93110391 Msa0898660:CDS
TTGCGCATCTACGAACAACT+AGG 0.530591 6_1:-93107567 None:intergenic
TGAAATGTAAAACTCAAAAG+TGG 0.533824 6_1:+93113902 Msa0898660:three_prime_UTR
AGCTGTAATTTGAGATTGGA+CGG 0.534103 6_1:-93113844 None:intergenic
CGAGCATGTCCTTTAAGCTC+AGG 0.535278 6_1:-93109902 None:intergenic
TAAACTGGAAAGAGATAAAG+AGG 0.536448 6_1:+93113635 Msa0898660:CDS
GCTGAACAATTCATACAAGA+TGG 0.539851 6_1:+93112855 Msa0898660:CDS
TAATCAGGCAACGGAGAAGA+TGG 0.542683 6_1:+93113440 Msa0898660:intron
ATAAATTGCAGGGGTTGGGT+TGG 0.544186 6_1:+93112675 Msa0898660:intron
AAGTGGAATGTATTCTATCT+CGG 0.547591 6_1:+93110213 Msa0898660:CDS
TTAGTAGAGATGGCTACAGC+TGG 0.548329 6_1:+93107391 Msa0898660:exon
ATAATGACGTTGGCAATGAT+GGG 0.549033 6_1:-93108789 None:intergenic
AAGCAAGTTTGGAATTAAAG+GGG 0.553275 6_1:+93109979 Msa0898660:CDS
GAGGTTGGCTAGTGGCAGAC+GGG 0.555888 6_1:-93107976 None:intergenic
GATGGCATTTGGTCTTCTAT+CGG 0.556172 6_1:+93113458 Msa0898660:CDS
CTCCTGAAGATCACTTGAAG+AGG 0.557415 6_1:-93107783 None:intergenic
AAAGGAGATTTAGAGAATGG+TGG 0.557417 6_1:+93113589 Msa0898660:CDS
TCAAGTTTGACATATTTACA+AGG 0.559709 6_1:-93110156 None:intergenic
GTTGAGAGCAGGATTGCTGT+TGG 0.560534 6_1:+93110292 Msa0898660:CDS
TGGAAAATTCACCTTCTGCT+GGG 0.563234 6_1:+93107509 Msa0898660:CDS
ATTCCTACATGCTCAAGGAC+CGG 0.566317 6_1:-93109329 None:intergenic
ATCTACTTGATAAAACGTTC+CGG 0.566860 6_1:+93107918 Msa0898660:CDS
ATATGACATGATGTTAGCTT+GGG 0.567307 6_1:+93107949 Msa0898660:CDS
TTGGCAATGATGGGAACTGC+AGG 0.568955 6_1:-93108780 None:intergenic
GTAGGAATATCCACATGGCC+TGG 0.573088 6_1:+93109344 Msa0898660:CDS
AAGTTCCTTGCATATCGTGA+TGG 0.574505 6_1:-93107842 None:intergenic
CAGAGAACTGATATCTTGGA+TGG 0.575106 6_1:-93110056 None:intergenic
CTCTTCAAGTGATCTTCAGG+AGG 0.577246 6_1:+93107784 Msa0898660:CDS
AACCTGAATTGACTGGACCA+TGG 0.583982 6_1:+93109724 Msa0898660:CDS
GGGTTGGGTTGGCTATGCAG+TGG 0.591986 6_1:+93112686 Msa0898660:CDS
ACAAAGTTCTTCCCAGCAGA+AGG 0.593230 6_1:-93107520 None:intergenic
TCTAATATCAAGTCTCCACC+TGG 0.593455 6_1:-93110130 None:intergenic
TGGAACAGTCACCACACAGC+CGG 0.595260 6_1:+93109310 Msa0898660:CDS
GGCCACTAACTTATGACGGA+TGG 0.596520 6_1:-93113785 None:intergenic
AGAGGTTGGCTAGTGGCAGA+CGG 0.596580 6_1:-93107977 None:intergenic
AACTTGAGAGAGTCAGATCA+CGG 0.596621 6_1:+93110172 Msa0898660:CDS
CATGATTCCAAGCCTGCAAG+TGG 0.597092 6_1:+93110196 Msa0898660:CDS
TATCATATATGGGGAACTGA+AGG 0.598527 6_1:-93108857 None:intergenic
TGACATGATGTTAGCTTGGG+AGG 0.598927 6_1:+93107952 Msa0898660:CDS
TCCAATCTCAAATTACAGCT+GGG 0.600168 6_1:+93113847 Msa0898660:three_prime_UTR
CCCATATATGATAAGTACCT+CGG 0.600511 6_1:+93108867 Msa0898660:CDS
AAGGGACGAAGCACTTTGGA+AGG 0.601543 6_1:+93110006 Msa0898660:CDS
AAAACTCAAAAGTGGAAGCA+AGG 0.602033 6_1:+93113910 Msa0898660:three_prime_UTR
TAGTTGATCTCATAGCAGAA+AGG 0.602982 6_1:-93109262 None:intergenic
AGAATCCATCACGATATGCA+AGG 0.603071 6_1:+93107837 Msa0898660:CDS
CAAGTTTGACATATTTACAA+GGG 0.603611 6_1:-93110155 None:intergenic
TTACAATGTATGCACCTCCA+AGG 0.611836 6_1:+93113544 Msa0898660:CDS
GTGCTTACTTTGTCAACTGG+TGG 0.612242 6_1:+93108831 Msa0898660:CDS
TGGATATTCCTACATGCTCA+AGG 0.612749 6_1:-93109334 None:intergenic
CAGCCGGTCCTTGAGCATGT+AGG 0.618537 6_1:+93109326 Msa0898660:CDS
TCTCGGCCACTAACTTATGA+CGG 0.619841 6_1:-93113789 None:intergenic
GCTGTTGGTGAAATAACTGT+TGG 0.620558 6_1:+93110307 Msa0898660:CDS
GAAGAGAATCATTCAATACA+GGG 0.622388 6_1:-93110081 None:intergenic
AGGAGAACTATGTATTTCGT+AGG 0.622812 6_1:-93113504 None:intergenic
CATATATGGGGAACTGAAGG+CGG 0.623373 6_1:-93108854 None:intergenic
TCTTCGGTTACATCATCTGG+AGG 0.633222 6_1:+93112178 Msa0898660:CDS
TCTTCAAGTGATCTTCAGGA+GGG 0.637944 6_1:+93107785 Msa0898660:CDS
CACTTCCTAAGTTCATCTAG+AGG 0.640974 6_1:-93112099 None:intergenic
ATGCTCAAGGACCGGCTGTG+TGG 0.641804 6_1:-93109321 None:intergenic
ACTTGAGAGAGTCAGATCAC+GGG 0.642880 6_1:+93110173 Msa0898660:CDS
CGAGGTACTTATCATATATG+GGG 0.642966 6_1:-93108866 None:intergenic
TCAGGAGGGCTTCAATCTAG+AGG 0.643264 6_1:+93107799 Msa0898660:CDS
TATATGATAAGTACCTCGGT+GGG 0.646491 6_1:+93108871 Msa0898660:CDS
CTAGCACAGAGAGATGGGAA+AGG 0.646632 6_1:+93113571 Msa0898660:CDS
CAAGTTTGGAATTAAAGGGG+TGG 0.647570 6_1:+93109982 Msa0898660:CDS
ATTAGTAAGAGGTTGGCTAG+TGG 0.650792 6_1:-93107984 None:intergenic
CCCTCCACCAATGAATACAA+TGG 0.653240 6_1:+93112797 Msa0898660:CDS
TAAATATGTTCAAGAACACA+AGG 0.659741 6_1:-93113524 None:intergenic
TCATGTCATATGTCAAACGC+CGG 0.670260 6_1:-93107937 None:intergenic
TTATGTGATCAGCTTCCAGG+TGG 0.671882 6_1:+93110115 Msa0898660:CDS
AAAGCGCTTACCAGGCCATG+TGG 0.685430 6_1:-93109354 None:intergenic
ATATATGATAAGTACCTCGG+TGG 0.687429 6_1:+93108870 Msa0898660:CDS
CCTGAATTGACTGGACCATG+GGG 0.698696 6_1:+93109726 Msa0898660:CDS
GGCACAGGCAACAGTTGACG+GGG 0.699795 6_1:+93110393 Msa0898660:CDS
TCTGCTATGAGATCAACTAG+AGG 0.704366 6_1:+93109266 Msa0898660:CDS
AGCATGTAGGAATATCCACA+TGG 0.716200 6_1:+93109339 Msa0898660:CDS
GGTCGAGATTTGTAACTGTG+TGG 0.730061 6_1:-93113764 None:intergenic
TTATTGGCTAGCCATCATCA+GGG 0.755162 6_1:+93109931 Msa0898660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAATAAATAA+AGG - chr6_1:93108243-93108262 None:intergenic 0.0%
!! TAATCTAAAAATAAACATAA+AGG + chr6_1:93108514-93108533 Msa0898660:intron 10.0%
!! TAAAAATATAGATAATCATA+AGG - chr6_1:93108641-93108660 None:intergenic 10.0%
!!! AGTTTTTGAATATATATTTT+TGG - chr6_1:93111740-93111759 None:intergenic 10.0%
!! AAATGAGATAAATAATTTAA+GGG + chr6_1:93112258-93112277 Msa0898660:intron 10.0%
!!! TAAAAAATAAAAGTACAAAT+TGG - chr6_1:93113313-93113332 None:intergenic 10.0%
!!! ATTTTTTTTCTTCTTTTTCT+GGG - chr6_1:93105556-93105575 None:intergenic 15.0%
!!! TGTTATTTTGATTTGAATTT+TGG + chr6_1:93105768-93105787 Msa0898660:intron 15.0%
!!! TAAAGATGAAATTTTTATGT+CGG + chr6_1:93105831-93105850 Msa0898660:intron 15.0%
!!! TATGATTTAGTTTGAATATT+AGG + chr6_1:93107657-93107676 Msa0898660:intron 15.0%
!! ATATTATATATGCATTCTAT+AGG + chr6_1:93108660-93108679 Msa0898660:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr6_1:93109441-93109460 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr6_1:93110622-93110641 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr6_1:93110623-93110642 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr6_1:93110687-93110706 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr6_1:93110688-93110707 None:intergenic 15.0%
!! TTCAATTCTTACATTATTAA+TGG - chr6_1:93110819-93110838 None:intergenic 15.0%
!!! ATGATTTTGAATTATGATTA+TGG + chr6_1:93110997-93111016 Msa0898660:intron 15.0%
!! AAAAGAATAAACAAAATGTT+AGG + chr6_1:93111382-93111401 Msa0898660:intron 15.0%
!! GAAATGAGATAAATAATTTA+AGG + chr6_1:93112257-93112276 Msa0898660:intron 15.0%
!! AATGAGATAAATAATTTAAG+GGG + chr6_1:93112259-93112278 Msa0898660:intron 15.0%
!! ATAATCTTATTATAAATTGC+AGG + chr6_1:93112664-93112683 Msa0898660:intron 15.0%
!! TAATCTTATTATAAATTGCA+GGG + chr6_1:93112665-93112684 Msa0898660:intron 15.0%
!! TAAAACCAAAATGAAATATA+TGG - chr6_1:93113020-93113039 None:intergenic 15.0%
!!! CTGTAAAACTTTTTTTTATA+GGG - chr6_1:93113045-93113064 None:intergenic 15.0%
!!! ACTGTAAAACTTTTTTTTAT+AGG - chr6_1:93113046-93113065 None:intergenic 15.0%
!!! AAAAATTGAAATTTTGCTTT+TGG + chr6_1:93113071-93113090 Msa0898660:intron 15.0%
!!! TTTAATTAATGTCGTATTTT+AGG - chr6_1:93113191-93113210 None:intergenic 15.0%
!! CTAATTTAAAAATTTGATAG+TGG - chr6_1:93113280-93113299 None:intergenic 15.0%
!!! CTTTTATTTTTTAAGAAGTT+TGG + chr6_1:93113320-93113339 Msa0898660:intron 15.0%
!! ACATTAATTTCAAATTATCT+CGG - chr6_1:93113809-93113828 None:intergenic 15.0%
!!! GATTTTTTTTCTTCTTTTTC+TGG - chr6_1:93105557-93105576 None:intergenic 20.0%
!! AAAGTATGAAATTAGAGAAA+TGG - chr6_1:93105672-93105691 None:intergenic 20.0%
!! AAATTTCATCTTTAGCAAAT+GGG - chr6_1:93105825-93105844 None:intergenic 20.0%
!! AAAATTTCATCTTTAGCAAA+TGG - chr6_1:93105826-93105845 None:intergenic 20.0%
!!! TGTTTTCTTTTGTAGATTAA+TGG + chr6_1:93106255-93106274 Msa0898660:intron 20.0%
!!! AATTTTGTAGAACTTTTGAA+AGG + chr6_1:93106300-93106319 Msa0898660:intron 20.0%
!! TTTGAGAAAAATTGGATATT+AGG + chr6_1:93107332-93107351 Msa0898660:five_prime_UTR 20.0%
!! GTTGACGTTTAAAAAAATAA+AGG + chr6_1:93108478-93108497 Msa0898660:intron 20.0%
!!! CTTGATTTAAAGTTTTAAAG+AGG - chr6_1:93108541-93108560 None:intergenic 20.0%
!! ATATGGCAATAAATATGAAA+AGG - chr6_1:93108589-93108608 None:intergenic 20.0%
!! ATATAGATAATCATAAGGAT+AGG - chr6_1:93108636-93108655 None:intergenic 20.0%
!!! TATTTGTGAAAATCTTTTTG+AGG + chr6_1:93108809-93108828 Msa0898660:CDS 20.0%
!! GAAAGTAGTAACATATTTAA+AGG - chr6_1:93108918-93108937 None:intergenic 20.0%
!!! ATAAAGTACAAAAGTATTCT+TGG - chr6_1:93109057-93109076 None:intergenic 20.0%
!! TTTATAATTGAGAACTTCAA+AGG + chr6_1:93109072-93109091 Msa0898660:intron 20.0%
!!! TTTCATTTTTTTTATTGCTC+TGG - chr6_1:93109222-93109241 None:intergenic 20.0%
!! GAATATATATTTGAGAAAGA+TGG - chr6_1:93109397-93109416 None:intergenic 20.0%
!! CAATTATAAAAAAGTCGTAT+CGG + chr6_1:93110372-93110391 Msa0898660:CDS 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr6_1:93110553-93110572 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr6_1:93110589-93110608 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr6_1:93110590-93110609 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr6_1:93110663-93110682 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr6_1:93110686-93110705 None:intergenic 20.0%
!! AAAGTAATTGAATGTAAACA+TGG + chr6_1:93110841-93110860 Msa0898660:intron 20.0%
!! AAGTAATTGAATGTAAACAT+GGG + chr6_1:93110842-93110861 Msa0898660:intron 20.0%
!! TATCTTCTAATAAAACTCTT+AGG + chr6_1:93111168-93111187 Msa0898660:intron 20.0%
!! TAAAAAGAGTTTATAACGAA+GGG - chr6_1:93111248-93111267 None:intergenic 20.0%
!! ATTGCTTAAGAAACTATTTA+AGG - chr6_1:93111691-93111710 None:intergenic 20.0%
!! AAATGAATCATGTACAATAT+TGG - chr6_1:93111966-93111985 None:intergenic 20.0%
!! TAATTTAAGGGGAAAAATTA+TGG + chr6_1:93112270-93112289 Msa0898660:intron 20.0%
!! AATCTTATTATAAATTGCAG+GGG + chr6_1:93112666-93112685 Msa0898660:intron 20.0%
!!! AGCAAAATTTCAATTTTTCA+AGG - chr6_1:93113069-93113088 None:intergenic 20.0%
!! TTTCAAACATTCCTATATAT+GGG - chr6_1:93113887-93113906 None:intergenic 20.0%
!! ATTTCAAACATTCCTATATA+TGG - chr6_1:93113888-93113907 None:intergenic 20.0%
!!! AATTTTTATGTCGGTTTTGT+AGG + chr6_1:93105840-93105859 Msa0898660:intron 25.0%
! ACAGACACTGATAATAATTT+AGG + chr6_1:93106101-93106120 Msa0898660:intron 25.0%
! ACAAAAGAAAACATACACAA+GGG - chr6_1:93106248-93106267 None:intergenic 25.0%
! TACAAAAGAAAACATACACA+AGG - chr6_1:93106249-93106268 None:intergenic 25.0%
! TATTACCAATATCTACATGT+TGG - chr6_1:93106396-93106415 None:intergenic 25.0%
!! ATATTTGCTTTGTGGATTAA+TGG + chr6_1:93106535-93106554 Msa0898660:intron 25.0%
! ACAAGAGTTCTACAAAATTT+AGG - chr6_1:93106581-93106600 None:intergenic 25.0%
! TTGTAACATTGCATAACAAT+TGG - chr6_1:93106664-93106683 None:intergenic 25.0%
! AAAATTGCAAACATGCATAA+GGG - chr6_1:93106826-93106845 None:intergenic 25.0%
!!! TTTGCAATTTTGTGGATTAA+TGG + chr6_1:93106835-93106854 Msa0898660:intron 25.0%
! AATTCAGGATTTACAAGAAA+AGG - chr6_1:93106865-93106884 None:intergenic 25.0%
! GAAATTGTTAGAAATGTTTG+TGG + chr6_1:93106909-93106928 Msa0898660:intron 25.0%
! TGTTTAAATTCCAATAGGTT+AGG - chr6_1:93107146-93107165 None:intergenic 25.0%
!! AGGTTTGTTTAAATTCCAAT+AGG - chr6_1:93107151-93107170 None:intergenic 25.0%
! AATCACAAATTGTGAAATAG+AGG - chr6_1:93107171-93107190 None:intergenic 25.0%
! GAGATCATTAATCTATGATT+CGG + chr6_1:93107212-93107231 Msa0898660:intron 25.0%
! TAAAAGATGGATCACTTAAA+TGG + chr6_1:93107443-93107462 Msa0898660:CDS 25.0%
!!! TTATTTTGCTGAAGAATTTG+AGG + chr6_1:93107483-93107502 Msa0898660:CDS 25.0%
!!! CATTGTCGGATTTTTTTTAT+TGG + chr6_1:93107716-93107735 Msa0898660:intron 25.0%
! ACTTGTACCAATAACAAAAA+AGG - chr6_1:93108064-93108083 None:intergenic 25.0%
! TATACTCAACATTTCTTCTT+TGG + chr6_1:93108166-93108185 Msa0898660:intron 25.0%
!!! GTTGTTGTTTAGAAAGATAA+AGG - chr6_1:93108271-93108290 None:intergenic 25.0%
! AAAGCTTCTCTTTCATTAAT+AGG - chr6_1:93108412-93108431 None:intergenic 25.0%
! CATGCTATATCTATTTGATA+TGG - chr6_1:93108606-93108625 None:intergenic 25.0%
! AATGAACCTTTATGTTTAGA+AGG + chr6_1:93108710-93108729 Msa0898660:intron 25.0%
!! ATTTTCACAAATAATGACGT+TGG - chr6_1:93108802-93108821 None:intergenic 25.0%
! AGTAACATATTTAAAGGTAG+AGG - chr6_1:93108912-93108931 None:intergenic 25.0%
!! TAAAATTTTGCCCTCTAATA+TGG + chr6_1:93109002-93109021 Msa0898660:intron 25.0%
!! AAAATTTTGCCCTCTAATAT+GGG + chr6_1:93109003-93109022 Msa0898660:intron 25.0%
! TTATTATTGTGATTAGCGAT+AGG + chr6_1:93109161-93109180 Msa0898660:intron 25.0%
!! TCTGCTAAATCATATCTTTT+TGG - chr6_1:93109684-93109703 None:intergenic 25.0%
! CACAAATTTATAAGCAAGTT+TGG + chr6_1:93109968-93109987 Msa0898660:CDS 25.0%
!! ATAAGCAAGTTTGGAATTAA+AGG + chr6_1:93109977-93109996 Msa0898660:CDS 25.0%
!! TAAGCAAGTTTGGAATTAAA+GGG + chr6_1:93109978-93109997 Msa0898660:CDS 25.0%
! CAAGTTTGACATATTTACAA+GGG - chr6_1:93110158-93110177 None:intergenic 25.0%
! TCAAGTTTGACATATTTACA+AGG - chr6_1:93110159-93110178 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr6_1:93110554-93110573 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr6_1:93110664-93110683 None:intergenic 25.0%
! TCCTTTGTCATAAAAAAATC+CGG - chr6_1:93110961-93110980 None:intergenic 25.0%
!!! GATTTTTTTATGACAAAGGA+GGG + chr6_1:93110961-93110980 Msa0898660:intron 25.0%
! TTATGGTTTGATATGATTGA+AGG + chr6_1:93111014-93111033 Msa0898660:intron 25.0%
! GTCTTGAGTTAGTATAAATA+AGG - chr6_1:93111079-93111098 None:intergenic 25.0%
! CTAAAAAGAGTTTATAACGA+AGG - chr6_1:93111249-93111268 None:intergenic 25.0%
!! CTTCGTTATAAACTCTTTTT+AGG + chr6_1:93111247-93111266 Msa0898660:intron 25.0%
! TGTCACATTAAAAATGGATA+AGG - chr6_1:93111273-93111292 None:intergenic 25.0%
!!! ATCCATTTTTAATGTGACAA+CGG + chr6_1:93111274-93111293 Msa0898660:intron 25.0%
! TTAATTCCATCATATGAGTT+AGG - chr6_1:93111364-93111383 None:intergenic 25.0%
!!! CATTTTAGAATTTGGACTTT+AGG - chr6_1:93111864-93111883 None:intergenic 25.0%
!! CTAAAGTCCAAATTCTAAAA+TGG + chr6_1:93111862-93111881 Msa0898660:intron 25.0%
!!! TCCAAATTCTAAAATGGTAT+CGG + chr6_1:93111868-93111887 Msa0898660:intron 25.0%
! AAAGTAGTTCCTGAAAAATA+GGG - chr6_1:93112077-93112096 None:intergenic 25.0%
! TAAAGTAGTTCCTGAAAAAT+AGG - chr6_1:93112078-93112097 None:intergenic 25.0%
! TCTTCAATCTTTGCTAAATT+GGG + chr6_1:93112122-93112141 Msa0898660:CDS 25.0%
! CTATAGCAATTTCAAATAAC+AGG - chr6_1:93112238-93112257 None:intergenic 25.0%
!!! ATTACCAGATGTTTTAATCA+AGG + chr6_1:93112744-93112763 Msa0898660:CDS 25.0%
! GATTCGTAAAAATAGCAAAA+GGG - chr6_1:93112946-93112965 None:intergenic 25.0%
! TGATTCGTAAAAATAGCAAA+AGG - chr6_1:93112947-93112966 None:intergenic 25.0%
!! TCTTGCCATATATTTCATTT+TGG + chr6_1:93113012-93113031 Msa0898660:intron 25.0%
! GTTCATGTAAATGTAACATT+TGG + chr6_1:93113113-93113132 Msa0898660:intron 25.0%
! AACACGATTCAAATATTACA+GGG + chr6_1:93113233-93113252 Msa0898660:intron 25.0%
!! TAAAAGTACAAATTGGCAAA+AGG - chr6_1:93113306-93113325 None:intergenic 25.0%
! TAAATATGTTCAAGAACACA+AGG - chr6_1:93113527-93113546 None:intergenic 25.0%
! TGAAATGTAAAACTCAAAAG+TGG + chr6_1:93113902-93113921 Msa0898660:three_prime_UTR 25.0%
!! CTTTTTCTGGGAAAATACAT+TGG - chr6_1:93105544-93105563 None:intergenic 30.0%
TGTGAAAAAGGTAACAACTT+TGG + chr6_1:93105621-93105640 Msa0898660:intron 30.0%
!! ATGGATTTGATTTGTGAAGA+GGG - chr6_1:93105653-93105672 None:intergenic 30.0%
!! AATGGATTTGATTTGTGAAG+AGG - chr6_1:93105654-93105673 None:intergenic 30.0%
! TTTGCTTTGTTATGCATGTT+TGG + chr6_1:93105877-93105896 Msa0898660:intron 30.0%
! TTGCTTTGTTATGCATGTTT+GGG + chr6_1:93105878-93105897 Msa0898660:intron 30.0%
CATACATGTCAATATTGTGT+CGG + chr6_1:93106144-93106163 Msa0898660:intron 30.0%
ATACCTTTAAGCTTAAGTGT+TGG + chr6_1:93106486-93106505 Msa0898660:intron 30.0%
GAAGTTGTTTGAATTGTTTG+TGG + chr6_1:93106615-93106634 Msa0898660:intron 30.0%
AACACTTCAGATTGAATTGA+AGG - chr6_1:93106785-93106804 None:intergenic 30.0%
! TTCAATTCAATCTGAAGTGT+TGG + chr6_1:93106784-93106803 Msa0898660:intron 30.0%
CAAAATTGCAAACATGCATA+AGG - chr6_1:93106827-93106846 None:intergenic 30.0%
! TATGCATGTTTGCAATTTTG+TGG + chr6_1:93106827-93106846 Msa0898660:intron 30.0%
! AATTTTGTAGAACGCTTGAA+GGG + chr6_1:93106881-93106900 Msa0898660:intron 30.0%
CTATTAGTGTTATAGTGTAG+TGG + chr6_1:93106992-93107011 Msa0898660:intron 30.0%
!!! TTGATGATGATCTAGTTTTG+AGG + chr6_1:93107238-93107257 Msa0898660:intron 30.0%
!!! CTAGTTTTGAGGATTCATAT+TGG + chr6_1:93107249-93107268 Msa0898660:intron 30.0%
TGTACTGAAACATAAAGGTA+AGG - chr6_1:93107303-93107322 None:intergenic 30.0%
TTGCATGTACTGAAACATAA+AGG - chr6_1:93107308-93107327 None:intergenic 30.0%
! GCAAGAACTTTGAGAAAAAT+TGG + chr6_1:93107324-93107343 Msa0898660:five_prime_UTR 30.0%
ATCATACAAGAGTGAAAGTT+TGG - chr6_1:93107643-93107662 None:intergenic 30.0%
AGAACGAAAATACACGTTAA+GGG - chr6_1:93107693-93107712 None:intergenic 30.0%
! ATTTTCGTTCTCTACATTGT+CGG + chr6_1:93107702-93107721 Msa0898660:intron 30.0%
!! ATATCGTGATGGATTCTTTA+GGG - chr6_1:93107834-93107853 None:intergenic 30.0%
ATCTACTTGATAAAACGTTC+CGG + chr6_1:93107918-93107937 Msa0898660:CDS 30.0%
! ATATGACATGATGTTAGCTT+GGG + chr6_1:93107949-93107968 Msa0898660:CDS 30.0%
GAAAGACTTACATTAGTAAG+AGG - chr6_1:93107998-93108017 None:intergenic 30.0%
! AACAAAAAAGGTATGAGGTA+AGG - chr6_1:93108052-93108071 None:intergenic 30.0%
! CCAATAACAAAAAAGGTATG+AGG - chr6_1:93108057-93108076 None:intergenic 30.0%
!!! CCTCATACCTTTTTTGTTAT+TGG + chr6_1:93108054-93108073 Msa0898660:intron 30.0%
CATCAACCTTCTAAACATAA+AGG - chr6_1:93108719-93108738 None:intergenic 30.0%
ATTACTGAATTCCAGACAAA+GGG - chr6_1:93108941-93108960 None:intergenic 30.0%
TATTACTGAATTCCAGACAA+AGG - chr6_1:93108942-93108961 None:intergenic 30.0%
! TTTGTCTGGAATTCAGTAAT+AGG + chr6_1:93108941-93108960 Msa0898660:intron 30.0%
! ATTAGAGGGCAAAATTTTAG+AGG - chr6_1:93109001-93109020 None:intergenic 30.0%
! AATTATTATCGGTGTTTACG+TGG - chr6_1:93109430-93109449 None:intergenic 30.0%
TCAACAAGTATGTAGTATGT+AGG - chr6_1:93109532-93109551 None:intergenic 30.0%
! TCAATTCAGGTTTAACAACT+TGG - chr6_1:93109716-93109735 None:intergenic 30.0%
TAACTGTGCAATTACTTACA+AGG - chr6_1:93109793-93109812 None:intergenic 30.0%
! AAGCAAGTTTGGAATTAAAG+GGG + chr6_1:93109979-93109998 Msa0898660:CDS 30.0%
GAAGAGAATCATTCAATACA+GGG - chr6_1:93110084-93110103 None:intergenic 30.0%
AGAAGAGAATCATTCAATAC+AGG - chr6_1:93110085-93110104 None:intergenic 30.0%
AAGTGGAATGTATTCTATCT+CGG + chr6_1:93110213-93110232 Msa0898660:CDS 30.0%
TCTAACTTAGGATTCGTATT+TGG + chr6_1:93110250-93110269 Msa0898660:CDS 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - chr6_1:93110575-93110594 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - chr6_1:93110576-93110595 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr6_1:93110679-93110698 None:intergenic 30.0%
TAAGAAACACATGAAGTTTC+CGG + chr6_1:93110939-93110958 Msa0898660:intron 30.0%
!!! TCCGGATTTTTTTATGACAA+AGG + chr6_1:93110957-93110976 Msa0898660:intron 30.0%
!!! GGATTTTTTTATGACAAAGG+AGG + chr6_1:93110960-93110979 Msa0898660:intron 30.0%
! TCTTACCAGACTAACTTTTA+AGG + chr6_1:93111213-93111232 Msa0898660:intron 30.0%
TTTATGCCTAACTCATATGA+TGG + chr6_1:93111355-93111374 Msa0898660:intron 30.0%
AATTGAAATGTGAAGTGTGA+AGG + chr6_1:93111419-93111438 Msa0898660:intron 30.0%
AGAAATAACAACTACCTTCA+AGG + chr6_1:93111485-93111504 Msa0898660:intron 30.0%
TTAGATGAAATAGATACGAG+CGG + chr6_1:93111601-93111620 Msa0898660:intron 30.0%
ATGGATCAAATAACCAAGAT+GGG + chr6_1:93111627-93111646 Msa0898660:intron 30.0%
!!! ACCGATACCATTTTAGAATT+TGG - chr6_1:93111872-93111891 None:intergenic 30.0%
AAGTTATAAATGAGCACCTA+TGG + chr6_1:93111906-93111925 Msa0898660:intron 30.0%
TGAATCATGTACAATATTGG+TGG - chr6_1:93111963-93111982 None:intergenic 30.0%
! AGAGTTTTCTGTTCTGATTT+TGG - chr6_1:93112006-93112025 None:intergenic 30.0%
GCATGCATTAAAGACAAAAT+AGG - chr6_1:93112048-93112067 None:intergenic 30.0%
AAGTAGTTCCTGAAAAATAG+GGG - chr6_1:93112076-93112095 None:intergenic 30.0%
TTTATCCTCTAGATGAACTT+AGG + chr6_1:93112094-93112113 Msa0898660:CDS 30.0%
GTCTTCAATCTTTGCTAAAT+TGG + chr6_1:93112121-93112140 Msa0898660:CDS 30.0%
TTAAGGGGAAAAATTATGGA+TGG + chr6_1:93112274-93112293 Msa0898660:intron 30.0%
TTATGGATGGTATGTAATAC+TGG + chr6_1:93112287-93112306 Msa0898660:intron 30.0%
TAACCAAACAAGACCATAAT+CGG - chr6_1:93112350-93112369 None:intergenic 30.0%
! ATTTTCATAAGTTCTCCTAG+AGG + chr6_1:93112481-93112500 Msa0898660:intron 30.0%
! TTTTCATAAGTTCTCCTAGA+GGG + chr6_1:93112482-93112501 Msa0898660:intron 30.0%
TGACAAAAATTGGCTGAAAA+CGG + chr6_1:93112506-93112525 Msa0898660:intron 30.0%
TTATTATAAATTGCAGGGGT+TGG + chr6_1:93112670-93112689 Msa0898660:intron 30.0%
TATTATAAATTGCAGGGGTT+GGG + chr6_1:93112671-93112690 Msa0898660:intron 30.0%
AGTTGTTCCATTGTATTCAT+TGG - chr6_1:93112807-93112826 None:intergenic 30.0%
ATATTTCTTCTCAAGTTTCG+TGG + chr6_1:93112882-93112901 Msa0898660:CDS 30.0%
AGAAAATACCTGAGGAAAAA+TGG - chr6_1:93112919-93112938 None:intergenic 30.0%
!! TGTCGTATTTTAGGAACTAA+AGG - chr6_1:93113182-93113201 None:intergenic 30.0%
CAACACGATTCAAATATTAC+AGG + chr6_1:93113232-93113251 Msa0898660:intron 30.0%
ACACGATTCAAATATTACAG+GGG + chr6_1:93113234-93113253 Msa0898660:intron 30.0%
TACTACCTTGTTCCTTTATA+TGG + chr6_1:93113417-93113436 Msa0898660:intron 30.0%
GATTACCATATAAAGGAACA+AGG - chr6_1:93113425-93113444 None:intergenic 30.0%
TGTTCCTTTATATGGTAATC+AGG + chr6_1:93113425-93113444 Msa0898660:intron 30.0%
TTTATATGGTAATCAGGCAA+CGG + chr6_1:93113431-93113450 Msa0898660:intron 30.0%
TTATCTCTTTCCAGTTTAAC+AGG - chr6_1:93113633-93113652 None:intergenic 30.0%
TAAACTGGAAAGAGATAAAG+AGG + chr6_1:93113635-93113654 Msa0898660:CDS 30.0%
ACAAGAAGAAAAAGTGATGA+TGG + chr6_1:93113658-93113677 Msa0898660:exon 30.0%
!!! TTTTATGTCGGTTTTGTAGG+TGG + chr6_1:93105843-93105862 Msa0898660:intron 35.0%
!!! TTTATGTCGGTTTTGTAGGT+GGG + chr6_1:93105844-93105863 Msa0898660:intron 35.0%
! AGTGTCTGTATCAAAGTATC+TGG - chr6_1:93106090-93106109 None:intergenic 35.0%
CGACACAATATTGACATGTA+TGG - chr6_1:93106146-93106165 None:intergenic 35.0%
AAATGAACACCAGCACATAT+TGG + chr6_1:93106172-93106191 Msa0898660:intron 35.0%
TGACACCAACATGTAGATAT+TGG + chr6_1:93106388-93106407 Msa0898660:intron 35.0%
CACAAAGCAAATATGCACAA+GGG - chr6_1:93106529-93106548 None:intergenic 35.0%
TGTAGAACTCTTGTCTTGAA+AGG + chr6_1:93106587-93106606 Msa0898660:intron 35.0%
TCAAGCGTTCTACAAAATTC+AGG - chr6_1:93106880-93106899 None:intergenic 35.0%
! GAATTTTGTAGAACGCTTGA+AGG + chr6_1:93106880-93106899 Msa0898660:intron 35.0%
TGATGACACAGCATTACAAT+TGG - chr6_1:93106958-93106977 None:intergenic 35.0%
AATGCTGTGTCATCAAATAG+TGG + chr6_1:93106963-93106982 Msa0898660:intron 35.0%
ACAGAACAATAGCTCTTCAA+AGG - chr6_1:93107069-93107088 None:intergenic 35.0%
AGTGATATAGCCTAACCTAT+TGG + chr6_1:93107133-93107152 Msa0898660:intron 35.0%
CTACTACTATCTTGTCAAGA+TGG - chr6_1:93107369-93107388 None:intergenic 35.0%
CATCTTGACAAGATAGTAGT+AGG + chr6_1:93107367-93107386 Msa0898660:five_prime_UTR 35.0%
AGTAGTAGGTTTAGTAGAGA+TGG + chr6_1:93107381-93107400 Msa0898660:exon 35.0%
CTTGAAGGTCTAGTAAAAGA+TGG + chr6_1:93107430-93107449 Msa0898660:CDS 35.0%
GTTTGAATATTAGGTAGCCA+AGG + chr6_1:93107666-93107685 Msa0898660:intron 35.0%
GAGAACGAAAATACACGTTA+AGG - chr6_1:93107694-93107713 None:intergenic 35.0%
!! CATATCGTGATGGATTCTTT+AGG - chr6_1:93107835-93107854 None:intergenic 35.0%
ACGATATGCAAGGAACTTAT+TGG + chr6_1:93107847-93107866 Msa0898660:CDS 35.0%
! TCATTGAAAGCGCAAATATC+CGG + chr6_1:93107893-93107912 Msa0898660:CDS 35.0%
! CGTTTTATCAAGTAGATGAC+CGG - chr6_1:93107915-93107934 None:intergenic 35.0%
CATATGACATGATGTTAGCT+TGG + chr6_1:93107948-93107967 Msa0898660:CDS 35.0%
GACTTACATTAGTAAGAGGT+TGG - chr6_1:93107994-93108013 None:intergenic 35.0%
TTCTTTCTGCACGTATCTAT+TGG + chr6_1:93108137-93108156 Msa0898660:intron 35.0%
ATTTAGCAAAACTGCACTGA+GGG + chr6_1:93108195-93108214 Msa0898660:intron 35.0%
TTTGGATGGAAAATCACTGA+AGG - chr6_1:93108300-93108319 None:intergenic 35.0%
TCTCATTCACAACAATTGGT+GGG - chr6_1:93108360-93108379 None:intergenic 35.0%
!!! GAGAAGCTTTGAGTTTTTCA+CGG + chr6_1:93108422-93108441 Msa0898660:intron 35.0%
!! GTTGATGAAGAAGTATCTGT+TGG + chr6_1:93108732-93108751 Msa0898660:CDS 35.0%
ATAATGACGTTGGCAATGAT+GGG - chr6_1:93108792-93108811 None:intergenic 35.0%
AATAATGACGTTGGCAATGA+TGG - chr6_1:93108793-93108812 None:intergenic 35.0%
TATCATATATGGGGAACTGA+AGG - chr6_1:93108860-93108879 None:intergenic 35.0%
! CGAGGTACTTATCATATATG+GGG - chr6_1:93108869-93108888 None:intergenic 35.0%
! CCGAGGTACTTATCATATAT+GGG - chr6_1:93108870-93108889 None:intergenic 35.0%
CCCATATATGATAAGTACCT+CGG + chr6_1:93108867-93108886 Msa0898660:CDS 35.0%
! ACCGAGGTACTTATCATATA+TGG - chr6_1:93108871-93108890 None:intergenic 35.0%
ATATATGATAAGTACCTCGG+TGG + chr6_1:93108870-93108889 Msa0898660:CDS 35.0%
TATATGATAAGTACCTCGGT+GGG + chr6_1:93108871-93108890 Msa0898660:CDS 35.0%
TTACTGAATTCCAGACAAAG+GGG - chr6_1:93108940-93108959 None:intergenic 35.0%
ATCTGCTTCAGTTTCTGATT+AGG + chr6_1:93109114-93109133 Msa0898660:intron 35.0%
TAGTTGATCTCATAGCAGAA+AGG - chr6_1:93109265-93109284 None:intergenic 35.0%
GAGAAGATTCTTGAGATTGA+TGG + chr6_1:93109290-93109309 Msa0898660:CDS 35.0%
CTTCAAGAATAACCAATGCA+TGG - chr6_1:93109565-93109584 None:intergenic 35.0%
ATGTTACAGAGAGTCACTAA+TGG - chr6_1:93109588-93109607 None:intergenic 35.0%
GTTGTTAAACCTGAATTGAC+TGG + chr6_1:93109717-93109736 Msa0898660:CDS 35.0%
! TTTAGGAATTTTGCGTTTGC+AGG + chr6_1:93110033-93110052 Msa0898660:CDS 35.0%
ATCCAAGATATCAGTTCTCT+GGG + chr6_1:93110058-93110077 Msa0898660:CDS 35.0%
AATTTATGTGATCAGCTTCC+AGG + chr6_1:93110112-93110131 Msa0898660:CDS 35.0%
ATAGAATACATTCCACTTGC+AGG - chr6_1:93110211-93110230 None:intergenic 35.0%
AATGTATTCTATCTCGGTCT+TGG + chr6_1:93110219-93110238 Msa0898660:CDS 35.0%
!! TGATGGTATCGACACTAATT+TGG + chr6_1:93110423-93110442 Msa0898660:CDS 35.0%
GCTTGGCTAAAAGGTAAAAA+CGG - chr6_1:93110475-93110494 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr6_1:93110540-93110559 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr6_1:93110709-93110728 Msa0898660:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG + chr6_1:93110722-93110741 Msa0898660:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + chr6_1:93110723-93110742 Msa0898660:intron 35.0%
TCTCATTGTTCCTAGATTGA+CGG - chr6_1:93110905-93110924 None:intergenic 35.0%
ATCTAGGAACAATGAGAACA+CGG + chr6_1:93110908-93110927 Msa0898660:intron 35.0%
CTCCGTTGTCACATTAAAAA+TGG - chr6_1:93111279-93111298 None:intergenic 35.0%
! ATAGGCTCTGATACGATATT+AGG + chr6_1:93111326-93111345 Msa0898660:intron 35.0%
AATGTGAAGTGTGAAGGAAA+AGG + chr6_1:93111425-93111444 Msa0898660:intron 35.0%
ATTTACAGCTTGAACCTTGA+AGG - chr6_1:93111502-93111521 None:intergenic 35.0%
TAGATGAAATAGATACGAGC+GGG + chr6_1:93111602-93111621 Msa0898660:intron 35.0%
CATGGATCAAATAACCAAGA+TGG + chr6_1:93111626-93111645 Msa0898660:intron 35.0%
TGGATCAAATAACCAAGATG+GGG + chr6_1:93111628-93111647 Msa0898660:intron 35.0%
TCAGAAGTTGCGTATAAATG+TGG + chr6_1:93111759-93111778 Msa0898660:intron 35.0%
CAGAAGTTGCGTATAAATGT+GGG + chr6_1:93111760-93111779 Msa0898660:intron 35.0%
AGAAGTTGCGTATAAATGTG+GGG + chr6_1:93111761-93111780 Msa0898660:intron 35.0%
CTTAACTCAACCTTAAAAGC+TGG - chr6_1:93111841-93111860 None:intergenic 35.0%
!! ATGGTATCGGTGCATATTAT+AGG + chr6_1:93111881-93111900 Msa0898660:intron 35.0%
ATGATCCATTGAAGTCTTCT+GGG + chr6_1:93112145-93112164 Msa0898660:CDS 35.0%
!!! TCTGGGTTTTGTTTGTTCTT+CGG + chr6_1:93112162-93112181 Msa0898660:CDS 35.0%
!! CAGTTTTAACATGCCGATTA+TGG + chr6_1:93112334-93112353 Msa0898660:intron 35.0%
TCAAATAAGCCGATACAAAC+AGG + chr6_1:93112604-93112623 Msa0898660:intron 35.0%
CATCATAAGCCTGTTTGTAT+CGG - chr6_1:93112616-93112635 None:intergenic 35.0%
CCTACCTTGATTAAAACATC+TGG - chr6_1:93112751-93112770 None:intergenic 35.0%
!!! CCAGATGTTTTAATCAAGGT+AGG + chr6_1:93112748-93112767 Msa0898660:CDS 35.0%
TGTTCCATTGTATTCATTGG+TGG - chr6_1:93112804-93112823 None:intergenic 35.0%
GCTGAACAATTCATACAAGA+TGG + chr6_1:93112855-93112874 Msa0898660:CDS 35.0%
GTTGCCTGATTACCATATAA+AGG - chr6_1:93113432-93113451 None:intergenic 35.0%
AGGAGAACTATGTATTTCGT+AGG - chr6_1:93113507-93113526 None:intergenic 35.0%
AAAGGAGATTTAGAGAATGG+TGG + chr6_1:93113589-93113608 Msa0898660:CDS 35.0%
! AGCTGTAATTTGAGATTGGA+CGG - chr6_1:93113847-93113866 None:intergenic 35.0%
TCCAATCTCAAATTACAGCT+GGG + chr6_1:93113847-93113866 Msa0898660:three_prime_UTR 35.0%
AAAACTCAAAAGTGGAAGCA+AGG + chr6_1:93113910-93113929 Msa0898660:three_prime_UTR 35.0%
CACACGCAATCATCAATTTC+TGG + chr6_1:93105590-93105609 Msa0898660:five_prime_UTR 40.0%
CTGGATTCTGTCTGTGAAAA+AGG + chr6_1:93105609-93105628 Msa0898660:five_prime_UTR 40.0%
TTTGAGTGTCCAATATGTGC+TGG - chr6_1:93106184-93106203 None:intergenic 40.0%
! GCACTGACACTTCAAATTGA+TGG - chr6_1:93106211-93106230 None:intergenic 40.0%
GCACCAACACTTAAGCTTAA+AGG - chr6_1:93106492-93106511 None:intergenic 40.0%
CCACAAAGCAAATATGCACA+AGG - chr6_1:93106530-93106549 None:intergenic 40.0%
CCTTGTGCATATTTGCTTTG+TGG + chr6_1:93106527-93106546 Msa0898660:intron 40.0%
TAGCACTACAACTAGAAGTG+AGG + chr6_1:93106694-93106713 Msa0898660:intron 40.0%
TTTGTGATTGACACCACTGT+TGG + chr6_1:93107182-93107201 Msa0898660:intron 40.0%
AAAACCAGAGCTATGCTTGA+AGG + chr6_1:93107415-93107434 Msa0898660:CDS 40.0%
GGATCACTTAAATGGTTGCT+TGG + chr6_1:93107451-93107470 Msa0898660:CDS 40.0%
TGCTGAAGAATTTGAGGAGA+TGG + chr6_1:93107489-93107508 Msa0898660:CDS 40.0%
ATGGAAAATTCACCTTCTGC+TGG + chr6_1:93107508-93107527 Msa0898660:CDS 40.0%
TGGAAAATTCACCTTCTGCT+GGG + chr6_1:93107509-93107528 Msa0898660:CDS 40.0%
! GCGCAAAGTAAGTGCATTTT+TGG + chr6_1:93107584-93107603 Msa0898660:intron 40.0%
AAATACACGTTAAGGGTCCT+TGG - chr6_1:93107686-93107705 None:intergenic 40.0%
GATCACTTGAAGAGGTCTTA+AGG - chr6_1:93107778-93107797 None:intergenic 40.0%
TCTTCAAGTGATCTTCAGGA+GGG + chr6_1:93107785-93107804 Msa0898660:CDS 40.0%
AGAATCCATCACGATATGCA+AGG + chr6_1:93107837-93107856 Msa0898660:CDS 40.0%
AAGTTCCTTGCATATCGTGA+TGG - chr6_1:93107845-93107864 None:intergenic 40.0%
TCATGTCATATGTCAAACGC+CGG - chr6_1:93107940-93107959 None:intergenic 40.0%
! ATTAGTAAGAGGTTGGCTAG+TGG - chr6_1:93107987-93108006 None:intergenic 40.0%
! CTCAGTGCAGTTTTGCTAAA+TGG - chr6_1:93108196-93108215 None:intergenic 40.0%
CATTTAGCAAAACTGCACTG+AGG + chr6_1:93108194-93108213 Msa0898660:intron 40.0%
TTTAGCAAAACTGCACTGAG+GGG + chr6_1:93108196-93108215 Msa0898660:intron 40.0%
! GAGATTTTCGCGATTTTGGA+TGG - chr6_1:93108314-93108333 None:intergenic 40.0%
TCCAAAATCGCGAAAATCTC+AGG + chr6_1:93108314-93108333 Msa0898660:intron 40.0%
CCAAAATCGCGAAAATCTCA+GGG + chr6_1:93108315-93108334 Msa0898660:intron 40.0%
CTCTCATTCACAACAATTGG+TGG - chr6_1:93108361-93108380 None:intergenic 40.0%
CACCAATTGTTGTGAATGAG+AGG + chr6_1:93108359-93108378 Msa0898660:intron 40.0%
AGCCTCTCATTCACAACAAT+TGG - chr6_1:93108364-93108383 None:intergenic 40.0%
AAAAGGCAAAACTGCATCAG+AGG - chr6_1:93108572-93108591 None:intergenic 40.0%
!! ATTACTTTTCTATCCCACCG+AGG - chr6_1:93108887-93108906 None:intergenic 40.0%
TTACTACTTTCCCCTTTGTC+TGG + chr6_1:93108927-93108946 Msa0898660:intron 40.0%
TGTAGTGCACCCATATTAGA+GGG - chr6_1:93109015-93109034 None:intergenic 40.0%
TTGTAGTGCACCCATATTAG+AGG - chr6_1:93109016-93109035 None:intergenic 40.0%
TCTGCTATGAGATCAACTAG+AGG + chr6_1:93109266-93109285 Msa0898660:CDS 40.0%
TGGATATTCCTACATGCTCA+AGG - chr6_1:93109337-93109356 None:intergenic 40.0%
AGCATGTAGGAATATCCACA+TGG + chr6_1:93109339-93109358 Msa0898660:CDS 40.0%
!! GTAACTTTAAAGCGCTTACC+AGG - chr6_1:93109365-93109384 None:intergenic 40.0%
CCTTAGATTGAATACGTGTC+TGG - chr6_1:93109497-93109516 None:intergenic 40.0%
CCAGACACGTATTCAATCTA+AGG + chr6_1:93109494-93109513 Msa0898660:intron 40.0%
CTGGAATTTCCTGAGCTTAA+AGG + chr6_1:93109893-93109912 Msa0898660:CDS 40.0%
! ATTATTGGCTAGCCATCATC+AGG + chr6_1:93109930-93109949 Msa0898660:CDS 40.0%
! TTATTGGCTAGCCATCATCA+GGG + chr6_1:93109931-93109950 Msa0898660:CDS 40.0%
ACAAAGAATCTCCCTGATGA+TGG - chr6_1:93109945-93109964 None:intergenic 40.0%
! CAAGTTTGGAATTAAAGGGG+TGG + chr6_1:93109982-93110001 Msa0898660:CDS 40.0%
CAGAGAACTGATATCTTGGA+TGG - chr6_1:93110059-93110078 None:intergenic 40.0%
CATCCAAGATATCAGTTCTC+TGG + chr6_1:93110057-93110076 Msa0898660:CDS 40.0%
TCTAATATCAAGTCTCCACC+TGG - chr6_1:93110133-93110152 None:intergenic 40.0%
AACTTGAGAGAGTCAGATCA+CGG + chr6_1:93110172-93110191 Msa0898660:CDS 40.0%
TTGGACACGGTTTCTAACTT+AGG + chr6_1:93110238-93110257 Msa0898660:CDS 40.0%
! GCTGTTGGTGAAATAACTGT+TGG + chr6_1:93110307-93110326 Msa0898660:CDS 40.0%
TGTTGGAGAAACGACTTTGT+TGG + chr6_1:93110324-93110343 Msa0898660:CDS 40.0%
AACGACTTTGTTGGAAAGAG+TGG + chr6_1:93110333-93110352 Msa0898660:CDS 40.0%
! TAAAAAAGTCGTATCGGCAC+AGG + chr6_1:93110378-93110397 Msa0898660:CDS 40.0%
CACTAATTTGGCTGTCATGA+AGG + chr6_1:93110435-93110454 Msa0898660:CDS 40.0%
GACAGAGGGAGTAATACTAT+TGG - chr6_1:93110517-93110536 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr6_1:93110539-93110558 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG - chr6_1:93110725-93110744 None:intergenic 40.0%
TTTGTGTCAATCAGGTGTCT+GGG - chr6_1:93110779-93110798 None:intergenic 40.0%
TCTACGTGTTTGTGTCAATC+AGG - chr6_1:93110787-93110806 None:intergenic 40.0%
AATCTTGGATCCGTCAATCT+AGG + chr6_1:93110892-93110911 Msa0898660:intron 40.0%
TCTAGGAACAATGAGAACAC+GGG + chr6_1:93110909-93110928 Msa0898660:intron 40.0%
!!! CAGACTAACTTTTAAGGCGA+CGG + chr6_1:93111219-93111238 Msa0898660:intron 40.0%
GAAAAGGAAGAACAGAACAC+TGG + chr6_1:93111441-93111460 Msa0898660:intron 40.0%
GTCTCTGTTCTTTGTTCACA+CGG - chr6_1:93111549-93111568 None:intergenic 40.0%
CTCTGGGCATCTGAAAAAAT+CGG + chr6_1:93111576-93111595 Msa0898660:intron 40.0%
TCTGGGCATCTGAAAAAATC+GGG + chr6_1:93111577-93111596 Msa0898660:intron 40.0%
AGATGAAATAGATACGAGCG+GGG + chr6_1:93111603-93111622 Msa0898660:intron 40.0%
GAAGTTGCGTATAAATGTGG+GGG + chr6_1:93111762-93111781 Msa0898660:intron 40.0%
AAGTTGCGTATAAATGTGGG+GGG + chr6_1:93111763-93111782 Msa0898660:intron 40.0%
!! TGCGTTTTCCCCTATTTTTC+AGG + chr6_1:93112065-93112084 Msa0898660:intron 40.0%
CACTTCCTAAGTTCATCTAG+AGG - chr6_1:93112102-93112121 None:intergenic 40.0%
GATGATCCATTGAAGTCTTC+TGG + chr6_1:93112144-93112163 Msa0898660:CDS 40.0%
CAAAACCCAGAAGACTTCAA+TGG - chr6_1:93112153-93112172 None:intergenic 40.0%
TGTTCTTCGGTTACATCATC+TGG + chr6_1:93112175-93112194 Msa0898660:CDS 40.0%
!! ATGCCGATTATGGTCTTGTT+TGG + chr6_1:93112344-93112363 Msa0898660:intron 40.0%
AATTGGCTGAAAACGGCTTA+TGG + chr6_1:93112513-93112532 Msa0898660:intron 40.0%
CATTGTATTCATTGGTGGAG+GGG - chr6_1:93112799-93112818 None:intergenic 40.0%
CCATTGTATTCATTGGTGGA+GGG - chr6_1:93112800-93112819 None:intergenic 40.0%
TCCATTGTATTCATTGGTGG+AGG - chr6_1:93112801-93112820 None:intergenic 40.0%
!! GTTACTCTCCATTTTTCCTC+AGG + chr6_1:93112908-93112927 Msa0898660:CDS 40.0%
AGGGAATGAGAAAATACCTG+AGG - chr6_1:93112927-93112946 None:intergenic 40.0%
GGGCTAAAACAAAGTAGCTA+CGG + chr6_1:93113254-93113273 Msa0898660:intron 40.0%
! GATGGCATTTGGTCTTCTAT+CGG + chr6_1:93113458-93113477 Msa0898660:CDS 40.0%
TTACAATGTATGCACCTCCA+AGG + chr6_1:93113544-93113563 Msa0898660:CDS 40.0%
GGGAAAGGAGATTTAGAGAA+TGG + chr6_1:93113586-93113605 Msa0898660:CDS 40.0%
!! AGTGATGATGGCGAAATCTT+TGG + chr6_1:93113670-93113689 Msa0898660:exon 40.0%
GTCCAATCTCAAATTACAGC+TGG + chr6_1:93113846-93113865 Msa0898660:three_prime_UTR 40.0%
! TCCCAGCTGTAATTTGAGAT+TGG - chr6_1:93113851-93113870 None:intergenic 40.0%
! GTTTTGTAGGTGGGTCACTT+GGG + chr6_1:93105853-93105872 Msa0898660:intron 45.0%
CACACATGTCAGTGTCATGT+CGG + chr6_1:93106740-93106759 Msa0898660:intron 45.0%
TTAGTAGAGATGGCTACAGC+TGG + chr6_1:93107391-93107410 Msa0898660:exon 45.0%
TAGACCTTCAAGCATAGCTC+TGG - chr6_1:93107422-93107441 None:intergenic 45.0%
ACAAAGTTCTTCCCAGCAGA+AGG - chr6_1:93107523-93107542 None:intergenic 45.0%
CGAACAACTAGGTTTGCAAC+TGG - chr6_1:93107559-93107578 None:intergenic 45.0%
TTGCGCATCTACGAACAACT+AGG - chr6_1:93107570-93107589 None:intergenic 45.0%
GACCTCTTCAAGTGATCTTC+AGG + chr6_1:93107781-93107800 Msa0898660:CDS 45.0%
CTCCTGAAGATCACTTGAAG+AGG - chr6_1:93107786-93107805 None:intergenic 45.0%
CTCTTCAAGTGATCTTCAGG+AGG + chr6_1:93107784-93107803 Msa0898660:CDS 45.0%
! TGACATGATGTTAGCTTGGG+AGG + chr6_1:93107952-93107971 Msa0898660:CDS 45.0%
! CCCTGAGATTTTCGCGATTT+TGG - chr6_1:93108318-93108337 None:intergenic 45.0%
! ATTGGTGGGCCTCTTAATGA+AGG - chr6_1:93108346-93108365 None:intergenic 45.0%
! GAGGTGCTTACTTTGTCAAC+TGG + chr6_1:93108828-93108847 Msa0898660:CDS 45.0%
GTGCTTACTTTGTCAACTGG+TGG + chr6_1:93108831-93108850 Msa0898660:CDS 45.0%
CATATATGGGGAACTGAAGG+CGG - chr6_1:93108857-93108876 None:intergenic 45.0%
ATTCCTACATGCTCAAGGAC+CGG - chr6_1:93109332-93109351 None:intergenic 45.0%
GATGCAGCAAAACCATGCAT+TGG + chr6_1:93109550-93109569 Msa0898660:intron 45.0%
ACTCTCTGTAACATGCATGC+AGG + chr6_1:93109594-93109613 Msa0898660:intron 45.0%
TCTGTAACATGCATGCAGGA+AGG + chr6_1:93109598-93109617 Msa0898660:intron 45.0%
AACCTGAATTGACTGGACCA+TGG + chr6_1:93109724-93109743 Msa0898660:CDS 45.0%
ACCTGAATTGACTGGACCAT+GGG + chr6_1:93109725-93109744 Msa0898660:CDS 45.0%
TCAAAAAGTCGAGTACCCCA+TGG - chr6_1:93109744-93109763 None:intergenic 45.0%
TAGATCAGAACCAGCTGTAC+TGG + chr6_1:93109874-93109893 Msa0898660:intron 45.0%
TCAGGAAATTCCAGTACAGC+TGG - chr6_1:93109887-93109906 None:intergenic 45.0%
GACATGCTCGTCGTGATTAT+TGG + chr6_1:93109915-93109934 Msa0898660:CDS 45.0%
TTGGAATTAAAGGGGTGGCA+AGG + chr6_1:93109987-93110006 Msa0898660:CDS 45.0%
TGGAATTAAAGGGGTGGCAA+GGG + chr6_1:93109988-93110007 Msa0898660:CDS 45.0%
!! GCACTTTGGAAGGCTGTTTT+AGG + chr6_1:93110016-93110035 Msa0898660:CDS 45.0%
TTATGTGATCAGCTTCCAGG+TGG + chr6_1:93110115-93110134 Msa0898660:CDS 45.0%
ACTTGAGAGAGTCAGATCAC+GGG + chr6_1:93110173-93110192 Msa0898660:CDS 45.0%
ATACATTCCACTTGCAGGCT+TGG - chr6_1:93110206-93110225 None:intergenic 45.0%
TTCTATCTCGGTCTTGGACA+CGG + chr6_1:93110225-93110244 Msa0898660:CDS 45.0%
GTTGACGGGGTTAAAGTTGA+TGG + chr6_1:93110406-93110425 Msa0898660:CDS 45.0%
AGCGTAAGAGCTTGGCTAAA+AGG - chr6_1:93110484-93110503 None:intergenic 45.0%
TAGTATTACTCCCTCTGTCC+CGG + chr6_1:93110518-93110537 Msa0898660:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG + chr6_1:93110727-93110746 Msa0898660:intron 45.0%
ATCAAATACTACCTCCGTCC+CGG - chr6_1:93110744-93110763 None:intergenic 45.0%
GTTTGTGTCAATCAGGTGTC+TGG - chr6_1:93110780-93110799 None:intergenic 45.0%
CGTCGCCTTAAAAGTTAGTC+TGG - chr6_1:93111221-93111240 None:intergenic 45.0%
ATCAGAGCCTATTCGTCAAG+CGG - chr6_1:93111318-93111337 None:intergenic 45.0%
CTGGGCATCTGAAAAAATCG+GGG + chr6_1:93111578-93111597 Msa0898660:intron 45.0%
GCAAGAAAGTTACCCCATCT+TGG - chr6_1:93111643-93111662 None:intergenic 45.0%
AGTTGCGTATAAATGTGGGG+GGG + chr6_1:93111764-93111783 Msa0898660:intron 45.0%
TCCCACGTCAACTAGAGATA+CGG + chr6_1:93111800-93111819 Msa0898660:intron 45.0%
! ACCTCTTGAGCCAGCTTTTA+AGG + chr6_1:93111828-93111847 Msa0898660:intron 45.0%
! ACCTTAAAAGCTGGCTCAAG+AGG - chr6_1:93111832-93111851 None:intergenic 45.0%
AAAGCACAGTCATGTTGTGG+TGG - chr6_1:93111939-93111958 None:intergenic 45.0%
GGTAAAGCACAGTCATGTTG+TGG - chr6_1:93111942-93111961 None:intergenic 45.0%
TCTTCGGTTACATCATCTGG+AGG + chr6_1:93112178-93112197 Msa0898660:CDS 45.0%
! CCAATTTTTGTCAGCCCTCT+AGG - chr6_1:93112499-93112518 None:intergenic 45.0%
CCTAGAGGGCTGACAAAAAT+TGG + chr6_1:93112496-93112515 Msa0898660:intron 45.0%
ATAAATTGCAGGGGTTGGGT+TGG + chr6_1:93112675-93112694 Msa0898660:intron 45.0%
CCCTCCACCAATGAATACAA+TGG + chr6_1:93112797-93112816 Msa0898660:CDS 45.0%
TAATCAGGCAACGGAGAAGA+TGG + chr6_1:93113440-93113459 Msa0898660:intron 45.0%
!!! TCTATCGGCAGGATTGGTTT+TGG + chr6_1:93113473-93113492 Msa0898660:CDS 45.0%
GAAAGCTAGCACAGAGAGAT+GGG + chr6_1:93113566-93113585 Msa0898660:CDS 45.0%
GGTCGAGATTTGTAACTGTG+TGG - chr6_1:93113767-93113786 None:intergenic 45.0%
GACCATCCGTCATAAGTTAG+TGG + chr6_1:93113783-93113802 Msa0898660:three_prime_UTR 45.0%
TCTCGGCCACTAACTTATGA+CGG - chr6_1:93113792-93113811 None:intergenic 45.0%
CTGAGTCGCTTCCCATATAT+AGG + chr6_1:93113873-93113892 Msa0898660:three_prime_UTR 45.0%
!!! TTATTTTTTGATTTAAAAAA+TGG - chr6_1:93105513-93105532 None:intergenic 5.0%
!! ATTAATTAAATTTACTTTAT+AGG + chr6_1:93113201-93113220 Msa0898660:intron 5.0%
!! TTAATTAAATTTACTTTATA+GGG + chr6_1:93113202-93113221 Msa0898660:intron 5.0%
!! GGTTTTGTAGGTGGGTCACT+TGG + chr6_1:93105852-93105871 Msa0898660:intron 50.0%
CGACATGACACTGACATGTG+TGG - chr6_1:93106742-93106761 None:intergenic 50.0%
GTGATTGACACCACTGTTGG+AGG + chr6_1:93107185-93107204 Msa0898660:intron 50.0%
GATCTCAACTCCTCCAACAG+TGG - chr6_1:93107198-93107217 None:intergenic 50.0%
TCAGGAGGGCTTCAATCTAG+AGG + chr6_1:93107799-93107818 Msa0898660:CDS 50.0%
AGGGCCTCTCCTTCATTAAG+AGG + chr6_1:93108334-93108353 Msa0898660:intron 50.0%
TGGGCCTCTTAATGAAGGAG+AGG - chr6_1:93108341-93108360 None:intergenic 50.0%
CTCAGATTGTTGCGAGGTGA+TGG + chr6_1:93108382-93108401 Msa0898660:intron 50.0%
! TTGGCAATGATGGGAACTGC+AGG - chr6_1:93108783-93108802 None:intergenic 50.0%
GTAGGAATATCCACATGGCC+TGG + chr6_1:93109344-93109363 Msa0898660:CDS 50.0%
CCTGAATTGACTGGACCATG+GGG + chr6_1:93109726-93109745 Msa0898660:CDS 50.0%
CGAGCATGTCCTTTAAGCTC+AGG - chr6_1:93109905-93109924 None:intergenic 50.0%
! AAGGGACGAAGCACTTTGGA+AGG + chr6_1:93110006-93110025 Msa0898660:CDS 50.0%
GGCCCAGAGAACTGATATCT+TGG - chr6_1:93110063-93110082 None:intergenic 50.0%
CATGATTCCAAGCCTGCAAG+TGG + chr6_1:93110196-93110215 Msa0898660:CDS 50.0%
CAAACAGCTCTGTTGAGAGC+AGG + chr6_1:93110281-93110300 Msa0898660:CDS 50.0%
GTTGAGAGCAGGATTGCTGT+TGG + chr6_1:93110292-93110311 Msa0898660:CDS 50.0%
GTCAGTTATTCCGGGACAGA+GGG - chr6_1:93110531-93110550 None:intergenic 50.0%
CACACAGTCGCAGTCAATCT+TGG + chr6_1:93110877-93110896 Msa0898660:intron 50.0%
TCAGAGCCTATTCGTCAAGC+GGG - chr6_1:93111317-93111336 None:intergenic 50.0%
CTTTGTTCACACGGCAGAGA+CGG - chr6_1:93111540-93111559 None:intergenic 50.0%
AACAGAGACCTGCAAGCTCT+GGG + chr6_1:93111560-93111579 Msa0898660:intron 50.0%
AAATAGATACGAGCGGGGCA+TGG + chr6_1:93111608-93111627 Msa0898660:intron 50.0%
GCCGTATCTCTAGTTGACGT+GGG - chr6_1:93111804-93111823 None:intergenic 50.0%
TGCCGTATCTCTAGTTGACG+TGG - chr6_1:93111805-93111824 None:intergenic 50.0%
!! TTGTGGTGGATAGCTGCCAT+AGG - chr6_1:93111925-93111944 None:intergenic 50.0%
GCAACGGAGAAGATGGCATT+TGG + chr6_1:93113447-93113466 Msa0898660:CDS 50.0%
! GCATTTGGTCTTCTATCGGC+AGG + chr6_1:93113462-93113481 Msa0898660:CDS 50.0%
TGGTCTTCTATCGGCAGGAT+TGG + chr6_1:93113467-93113486 Msa0898660:CDS 50.0%
!! TCTGTGCTAGCTTTCCTTGG+AGG - chr6_1:93113561-93113580 None:intergenic 50.0%
!! CTCTCTGTGCTAGCTTTCCT+TGG - chr6_1:93113564-93113583 None:intergenic 50.0%
GGAAAGCTAGCACAGAGAGA+TGG + chr6_1:93113565-93113584 Msa0898660:CDS 50.0%
CTAGCACAGAGAGATGGGAA+AGG + chr6_1:93113571-93113590 Msa0898660:CDS 50.0%
ACCAGCTGCTCCTGTTAAAC+TGG + chr6_1:93113620-93113639 Msa0898660:CDS 50.0%
TCCAGTTTAACAGGAGCAGC+TGG - chr6_1:93113624-93113643 None:intergenic 50.0%
! GGCCACTAACTTATGACGGA+TGG - chr6_1:93113788-93113807 None:intergenic 50.0%
CACACACGTCAGTGTCGTGT+CGG + chr6_1:93106447-93106466 Msa0898660:intron 55.0%
! AGAGGTTGGCTAGTGGCAGA+CGG - chr6_1:93107980-93107999 None:intergenic 55.0%
GAGAGGCTCAGATTGTTGCG+AGG + chr6_1:93108376-93108395 Msa0898660:intron 55.0%
TGGAACAGTCACCACACAGC+CGG + chr6_1:93109310-93109329 Msa0898660:CDS 55.0%
! AAAGCGCTTACCAGGCCATG+TGG - chr6_1:93109357-93109376 None:intergenic 55.0%
! CCGACACAGCTCTGACACAT+GGG - chr6_1:93109471-93109490 None:intergenic 55.0%
CCCATGTGTCAGAGCTGTGT+CGG + chr6_1:93109468-93109487 Msa0898660:intron 55.0%
! TCCGACACAGCTCTGACACA+TGG - chr6_1:93109472-93109491 None:intergenic 55.0%
CCCCATGGTCCAGTCAATTC+AGG - chr6_1:93109729-93109748 None:intergenic 55.0%
! TGGCAAGGGACGAAGCACTT+TGG + chr6_1:93110002-93110021 Msa0898660:CDS 55.0%
TCGGCACAGGCAACAGTTGA+CGG + chr6_1:93110391-93110410 Msa0898660:CDS 55.0%
GGTCAGTTATTCCGGGACAG+AGG - chr6_1:93110532-93110551 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG + chr6_1:93110730-93110749 Msa0898660:intron 55.0%
ATCCTCCCCGCTTGACGAAT+AGG + chr6_1:93111308-93111327 Msa0898660:intron 55.0%
CAGAGCCTATTCGTCAAGCG+GGG - chr6_1:93111316-93111335 None:intergenic 55.0%
GAACAGAGACCTGCAAGCTC+TGG + chr6_1:93111559-93111578 Msa0898660:intron 55.0%
TTCAGATGCCCAGAGCTTGC+AGG - chr6_1:93111571-93111590 None:intergenic 55.0%
CGACACGACACTGACGTGTG+TGG - chr6_1:93106449-93106468 None:intergenic 60.0%
! CGTCAGTGTCGTGTCGGTGT+TGG + chr6_1:93106453-93106472 Msa0898660:intron 60.0%
!! CGTGTCGGTGTTGGTCACTC+TGG + chr6_1:93106462-93106481 Msa0898660:intron 60.0%
! GAGGTTGGCTAGTGGCAGAC+GGG - chr6_1:93107979-93107998 None:intergenic 60.0%
ATGCTCAAGGACCGGCTGTG+TGG - chr6_1:93109324-93109343 None:intergenic 60.0%
CAGCCGGTCCTTGAGCATGT+AGG + chr6_1:93109326-93109345 Msa0898660:CDS 60.0%
CGGCACAGGCAACAGTTGAC+GGG + chr6_1:93110392-93110411 Msa0898660:CDS 60.0%
GGCACAGGCAACAGTTGACG+GGG + chr6_1:93110393-93110412 Msa0898660:CDS 60.0%
TCGTCAAGCGGGGAGGATTG+AGG - chr6_1:93111306-93111325 None:intergenic 60.0%
AGCCTATTCGTCAAGCGGGG+AGG - chr6_1:93111313-93111332 None:intergenic 60.0%
!! GGGTTGGGTTGGCTATGCAG+TGG + chr6_1:93112686-93112705 Msa0898660:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 93105504 93113977 93105504 ID=Msa0898660;Name=Msa0898660
chr6_1 mRNA 93105504 93113977 93105504 ID=Msa0898660-mRNA-1;Parent=Msa0898660;Name=Msa0898660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=208|0.88|0.9|1|0.88|0.8|10|303|694
chr6_1 exon 93105504 93105630 93105504 ID=Msa0898660-mRNA-1:exon:15702;Parent=Msa0898660-mRNA-1
chr6_1 exon 93107319 93107590 93107319 ID=Msa0898660-mRNA-1:exon:15703;Parent=Msa0898660-mRNA-1
chr6_1 exon 93107772 93108006 93107772 ID=Msa0898660-mRNA-1:exon:15704;Parent=Msa0898660-mRNA-1
chr6_1 exon 93108729 93108901 93108729 ID=Msa0898660-mRNA-1:exon:15705;Parent=Msa0898660-mRNA-1
chr6_1 exon 93109223 93109365 93109223 ID=Msa0898660-mRNA-1:exon:15706;Parent=Msa0898660-mRNA-1
chr6_1 exon 93109616 93109793 93109616 ID=Msa0898660-mRNA-1:exon:15707;Parent=Msa0898660-mRNA-1
chr6_1 exon 93109877 93110456 93109877 ID=Msa0898660-mRNA-1:exon:15708;Parent=Msa0898660-mRNA-1
chr6_1 exon 93112087 93112199 93112087 ID=Msa0898660-mRNA-1:exon:15709;Parent=Msa0898660-mRNA-1
chr6_1 exon 93112686 93112929 93112686 ID=Msa0898660-mRNA-1:exon:15710;Parent=Msa0898660-mRNA-1
chr6_1 exon 93113447 93113977 93113447 ID=Msa0898660-mRNA-1:exon:15711;Parent=Msa0898660-mRNA-1
chr6_1 five_prime_UTR 93105504 93105630 93105504 ID=Msa0898660-mRNA-1:five_prime_utr;Parent=Msa0898660-mRNA-1
chr6_1 five_prime_UTR 93107319 93107399 93107319 ID=Msa0898660-mRNA-1:five_prime_utr;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93107400 93107590 93107400 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93107772 93108006 93107772 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93108729 93108901 93108729 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93109223 93109365 93109223 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93109616 93109793 93109616 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93109877 93110456 93109877 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93112087 93112199 93112087 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93112686 93112929 93112686 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 CDS 93113447 93113674 93113447 ID=Msa0898660-mRNA-1:cds;Parent=Msa0898660-mRNA-1
chr6_1 three_prime_UTR 93113675 93113977 93113675 ID=Msa0898660-mRNA-1:three_prime_utr;Parent=Msa0898660-mRNA-1
Gene Sequence

>Msa0898660

ATGGCTACAGCTGGAAAAACCAGAGCTATGCTTGAAGGTCTAGTAAAAGATGGATCACTTAAATGGTTGCTTGGCAAGAAGAGTTATTTTGCTGAAGAATTTGAGGAGATGGAAAATTCACCTTCTGCTGGGAAGAACTTTGTACGTGAACTATCTCCAGTTGCAAACCTAGTTGTTCGTAGATGCGCAAAAATCCTTAAGACCTCTTCAAGTGATCTTCAGGAGGGCTTCAATCTAGAGGCGTCTGATTCCCTAAAGAATCCATCACGATATGCAAGGAACTTATTGGAGTATTGTTGTTTCAAAGCACTTTCATTGAAAGCGCAAATATCCGGTCATCTACTTGATAAAACGTTCCGGCGTTTGACATATGACATGATGTTAGCTTGGGAGGTCCCGTCTGCCACTAGCCAACCTCTTACTAATAAGGTTGATGAAGAAGTATCTGTTGGATTAGAAGCTTTCTGTCGAATAGCTCCTGCAGTTCCCATCATTGCCAACGTCATTATTTGTGAAAATCTTTTTGAGGTGCTTACTTTGTCAACTGGTGGCCGCCTTCAGTTCCCCATATATGATAAGTACCTCGGTGGGATAGAAAAAGCAATAAAAAAAATGAAAAGCAATTCAGATTCGTCTCTCCTTTCTGCTATGAGATCAACTAGAGGTGAGAAGATTCTTGAGATTGATGGAACAGTCACCACACAGCCGGTCCTTGAGCATGTAGGAATATCCACATGGCCTGGAAGGTTAATCTTAACAGATCATGCACTTTATTTCGAAGAACTTCGCGTTGTATCATATGACAAACCAAAAAGATATGATTTAGCAGACGATCTAAACCAAGTTGTTAAACCTGAATTGACTGGACCATGGGGTACTCGACTTTTTGACAAAGCAGTATTCTATAGTTCGACATCCTTATCAGAACCAGCTGTACTGGAATTTCCTGAGCTTAAAGGACATGCTCGTCGTGATTATTGGCTAGCCATCATCAGGGAGATTCTTTGTGTTCACAAATTTATAAGCAAGTTTGGAATTAAAGGGGTGGCAAGGGACGAAGCACTTTGGAAGGCTGTTTTAGGAATTTTGCGTTTGCAGGCCATCCAAGATATCAGTTCTCTGGGCCCTGTATTGAATGATTCTCTTCTCATGTTTAATTTATGTGATCAGCTTCCAGGTGGAGACTTGATATTAGAAACCCTTGTAAATATGTCAAACTTGAGAGAGTCAGATCACGGGCATGATTCCAAGCCTGCAAGTGGAATGTATTCTATCTCGGTCTTGGACACGGTTTCTAACTTAGGATTCGTATTTGGAACAAGTTCAAACAGCTCTGTTGAGAGCAGGATTGCTGTTGGTGAAATAACTGTTGGAGAAACGACTTTGTTGGAAAGAGTGGTTAAAGAATCTAAGAACAATTATAAAAAAGTCGTATCGGCACAGGCAACAGTTGACGGGGTTAAAGTTGATGGTATCGACACTAATTTGGCTGTCATGAAGGAACTACTTTATCCTCTAGATGAACTTAGGAAGTGTCTTCAATCTTTGCTAAATTGGGATGATCCATTGAAGTCTTCTGGGTTTTGTTTGTTCTTCGGTTACATCATCTGGAGGGGTTGGGTTGGCTATGCAGTGGCACTAGTGCTTGTGTTCATTTCAGCTTTTATGATCATTACCAGATGTTTTAATCAAGGTAGGTCTGTAGCTGAAGTTAAAGTAATAGCCCCTCCACCAATGAATACAATGGAACAACTTTTAGCTGTTCAGAATGCTGTCTCTCAAGCTGAACAATTCATACAAGATGGTAACATATTTCTTCTCAAGTTTCGTGGCTTGTTACTCTCCATTTTTCCTCAGGCAACGGAGAAGATGGCATTTGGTCTTCTATCGGCAGGATTGGTTTTGGCTTTCTTACCTACGAAATACATAGTTCTCCTTGTGTTCTTGAACATATTTACAATGTATGCACCTCCAAGGAAAGCTAGCACAGAGAGATGGGAAAGGAGATTTAGAGAATGGTGGTTCAGCATACCAGCTGCTCCTGTTAAACTGGAAAGAGATAAAGAGGACAAGAAGAAAAAGTGA
Protein sequence

>Msa0898660

MATAGKTRAMLEGLVKDGSLKWLLGKKSYFAEEFEEMENSPSAGKNFVRELSPVANLVVRRCAKILKTSSSDLQEGFNLEASDSLKNPSRYARNLLEYCCFKALSLKAQISGHLLDKTFRRLTYDMMLAWEVPSATSQPLTNKVDEEVSVGLEAFCRIAPAVPIIANVIICENLFEVLTLSTGGRLQFPIYDKYLGGIEKAIKKMKSNSDSSLLSAMRSTRGEKILEIDGTVTTQPVLEHVGISTWPGRLILTDHALYFEELRVVSYDKPKRYDLADDLNQVVKPELTGPWGTRLFDKAVFYSSTSLSEPAVLEFPELKGHARRDYWLAIIREILCVHKFISKFGIKGVARDEALWKAVLGILRLQAIQDISSLGPVLNDSLLMFNLCDQLPGGDLILETLVNMSNLRESDHGHDSKPASGMYSISVLDTVSNLGFVFGTSSNSSVESRIAVGEITVGETTLLERVVKESKNNYKKVVSAQATVDGVKVDGIDTNLAVMKELLYPLDELRKCLQSLLNWDDPLKSSGFCLFFGYIIWRGWVGYAVALVLVFISAFMIITRCFNQGRSVAEVKVIAPPPMNTMEQLLAVQNAVSQAEQFIQDGNIFLLKFRGLLLSIFPQATEKMAFGLLSAGLVLAFLPTKYIVLLVFLNIFTMYAPPRKASTERWERRFREWWFSIPAAPVKLERDKEDKKKK*