Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667120 | XP_003604569.1 | 93.786 | 515 | 29 | 1 | 1 | 515 | 1 | 512 | 0.0 | 908 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667120 | sp|Q7Y1W1|TIC56_ARATH | 59.553 | 492 | 187 | 6 | 1 | 487 | 1 | 485 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667120 | G7JLT3 | 93.786 | 515 | 29 | 1 | 1 | 515 | 1 | 512 | 0.0 | 908 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa0667120 | 0.833966 | 3.936387e-56 | -8.615850e-47 |
| Msa0017940 | Msa0667120 | 0.802775 | 4.779617e-49 | -8.615850e-47 |
| Msa0032400 | Msa0667120 | 0.829747 | 4.330633e-55 | -8.615850e-47 |
| Msa0049990 | Msa0667120 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0073820 | Msa0667120 | 0.836990 | 6.768550e-57 | -8.615850e-47 |
| Msa0082820 | Msa0667120 | 0.810251 | 1.265027e-50 | -8.615850e-47 |
| Msa0091550 | Msa0667120 | 0.813084 | 3.061242e-51 | -8.615850e-47 |
| Msa0094700 | Msa0667120 | 0.844399 | 7.744118e-59 | -8.615850e-47 |
| Msa0629290 | Msa0667120 | 0.841397 | 4.872561e-58 | -8.615850e-47 |
| Msa0637850 | Msa0667120 | 0.813485 | 2.500025e-51 | -8.615850e-47 |
| Msa0639370 | Msa0667120 | 0.868164 | 8.002907e-66 | -8.615850e-47 |
| Msa0647750 | Msa0667120 | 0.817274 | 3.589767e-52 | -8.615850e-47 |
| Msa0661470 | Msa0667120 | 0.809287 | 2.038968e-50 | -8.615850e-47 |
| Msa0667120 | Msa0682460 | 0.804945 | 1.692669e-49 | -8.615850e-47 |
| Msa0667120 | Msa0710950 | 0.804051 | 2.600322e-49 | -8.615850e-47 |
| Msa0667120 | Msa0712070 | 0.801167 | 1.023079e-48 | -8.615850e-47 |
| Msa0667120 | Msa0742170 | 0.811796 | 5.853448e-51 | -8.615850e-47 |
| Msa0667120 | Msa0756470 | 0.801909 | 7.208430e-49 | -8.615850e-47 |
| Msa0667120 | Msa0764020 | 0.837410 | 5.283153e-57 | -8.615850e-47 |
| Msa0667120 | Msa0786050 | 0.828330 | 9.547494e-55 | -8.615850e-47 |
| Msa0667120 | Msa0790830 | 0.812372 | 4.381732e-51 | -8.615850e-47 |
| Msa0667120 | Msa0804110 | 0.802885 | 4.537666e-49 | -8.615850e-47 |
| Msa0667120 | Msa0805940 | 0.858982 | 5.665155e-63 | -8.615850e-47 |
| Msa0667120 | Msa0808420 | 0.800790 | 1.221934e-48 | -8.615850e-47 |
| Msa0667120 | Msa0823410 | 0.810306 | 1.231020e-50 | -8.615850e-47 |
| Msa0667120 | Msa0824140 | 0.808143 | 3.579800e-50 | -8.615850e-47 |
| Msa0667120 | Msa0843690 | 0.828080 | 1.096456e-54 | -8.615850e-47 |
| Msa0667120 | Msa0862300 | 0.816079 | 6.652722e-52 | -8.615850e-47 |
| Msa0667120 | Msa0867340 | 0.816992 | 4.154180e-52 | -8.615850e-47 |
| Msa0667120 | Msa0898720 | 0.819122 | 1.370880e-52 | -8.615850e-47 |
| Msa0667120 | Msa0968010 | 0.815788 | 7.725433e-52 | -8.615850e-47 |
| Msa0667120 | Msa1009790 | 0.801353 | 9.372322e-49 | -8.615850e-47 |
| Msa0667120 | Msa1011240 | 0.837909 | 3.934758e-57 | -8.615850e-47 |
| Msa0667120 | Msa1032140 | 0.831970 | 1.234396e-55 | -8.615850e-47 |
| Msa0667120 | Msa1067430 | 0.819299 | 1.249010e-52 | -8.615850e-47 |
| Msa0667120 | Msa1072080 | 0.853650 | 2.077150e-61 | -8.615850e-47 |
| Msa0667120 | Msa1084490 | 0.812051 | 5.148988e-51 | -8.615850e-47 |
| Msa0667120 | Msa1118390 | 0.846849 | 1.677425e-59 | -8.615850e-47 |
| Msa0667120 | Msa1159100 | 0.809315 | 2.011008e-50 | -8.615850e-47 |
| Msa0667120 | Msa1183390 | 0.806553 | 7.778372e-50 | -8.615850e-47 |
| Msa0667120 | Msa1198870 | 0.802384 | 5.756618e-49 | -8.615850e-47 |
| Msa0667120 | Msa1206440 | 0.821820 | 3.295468e-53 | -8.615850e-47 |
| Msa0667120 | Msa1225570 | 0.808991 | 2.359506e-50 | -8.615850e-47 |
| Msa0667120 | Msa1229050 | 0.836593 | 8.544263e-57 | -8.615850e-47 |
| Msa0667120 | Msa1238710 | 0.819060 | 1.415837e-52 | -8.615850e-47 |
| Msa0667120 | Msa1244260 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa0667120 | Msa1259470 | 0.830898 | 2.266032e-55 | -8.615850e-47 |
| Msa0667120 | Msa1269550 | 0.817564 | 3.089116e-52 | -8.615850e-47 |
| Msa0667120 | Msa1271490 | 0.838372 | 2.991522e-57 | -8.615850e-47 |
| Msa0667120 | Msa1271510 | 0.822559 | 2.220002e-53 | -8.615850e-47 |
| Msa0667120 | Msa1302750 | 0.804481 | 2.116394e-49 | -8.615850e-47 |
| Msa0667120 | Msa1308930 | 0.815786 | 7.735430e-52 | -8.615850e-47 |
| Msa0667120 | Msa1309360 | 0.822768 | 1.984888e-53 | -8.615850e-47 |
| Msa0667120 | Msa1375600 | 0.828418 | 9.091134e-55 | -8.615850e-47 |
| Msa0667120 | Msa1376560 | 0.809263 | 2.063200e-50 | -8.615850e-47 |
| Msa0667120 | Msa1404370 | 0.832782 | 7.767160e-56 | -8.615850e-47 |
| Msa0667120 | Msa1407710 | 0.813797 | 2.134303e-51 | -8.615850e-47 |
| Msa0667120 | Msa1408770 | 0.810112 | 1.355278e-50 | -8.615850e-47 |
| Msa0667120 | Msa1415250 | 0.820917 | 5.324809e-53 | -8.615850e-47 |
| Msa0667120 | Msa1418600 | 0.816016 | 6.871663e-52 | -8.615850e-47 |
| Msa0667120 | Msa1422900 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0667120 | Msa1424240 | 0.820095 | 8.218326e-53 | -8.615850e-47 |
| Msa0667120 | Msa1429390 | 0.816627 | 5.016812e-52 | -8.615850e-47 |
| Msa0667120 | Msa1430270 | 0.843558 | 1.301168e-58 | -8.615850e-47 |
| Msa0667120 | Msa1438360 | 0.805402 | 1.358566e-49 | -8.615850e-47 |
| Msa0131390 | Msa0667120 | 0.813519 | 2.457031e-51 | -8.615850e-47 |
| Msa0141770 | Msa0667120 | 0.803324 | 3.679991e-49 | -8.615850e-47 |
| Msa0164540 | Msa0667120 | 0.814492 | 1.498955e-51 | -8.615850e-47 |
| Msa0171780 | Msa0667120 | 0.835487 | 1.630605e-56 | -8.615850e-47 |
| Msa0171930 | Msa0667120 | 0.858767 | 6.570921e-63 | -8.615850e-47 |
| Msa0175280 | Msa0667120 | 0.802218 | 6.227938e-49 | -8.615850e-47 |
| Msa0176710 | Msa0667120 | 0.804916 | 1.716435e-49 | -8.615850e-47 |
| Msa0177490 | Msa0667120 | 0.808522 | 2.971108e-50 | -8.615850e-47 |
| Msa0179200 | Msa0667120 | 0.807486 | 4.938170e-50 | -8.615850e-47 |
| Msa0185550 | Msa0667120 | 0.824662 | 7.147859e-54 | -8.615850e-47 |
| Msa0185700 | Msa0667120 | 0.818877 | 1.557971e-52 | -8.615850e-47 |
| Msa0197900 | Msa0667120 | 0.842405 | 2.638299e-58 | -8.615850e-47 |
| Msa0206970 | Msa0667120 | 0.801797 | 7.601632e-49 | -8.615850e-47 |
| Msa0365110 | Msa0667120 | 0.804661 | 1.940705e-49 | -8.615850e-47 |
| Msa0367370 | Msa0667120 | 0.809149 | 2.181890e-50 | -8.615850e-47 |
| Msa0379390 | Msa0667120 | 0.800770 | 1.233020e-48 | -8.615850e-47 |
| Msa0379450 | Msa0667120 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0380440 | Msa0667120 | 0.826361 | 2.829513e-54 | -8.615850e-47 |
| Msa0386270 | Msa0667120 | 0.836778 | 7.664843e-57 | -8.615850e-47 |
| Msa0415050 | Msa0667120 | 0.828220 | 1.014711e-54 | -8.615850e-47 |
| Msa0419030 | Msa0667120 | 0.826585 | 2.502256e-54 | -8.615850e-47 |
| Msa0429560 | Msa0667120 | 0.820180 | 7.860668e-53 | -8.615850e-47 |
| Msa0436090 | Msa0667120 | 0.805585 | 1.243285e-49 | -8.615850e-47 |
| Msa0436310 | Msa0667120 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0446480 | Msa0667120 | 0.808783 | 2.613307e-50 | -8.615850e-47 |
| Msa0452700 | Msa0667120 | 0.801869 | 7.347152e-49 | -8.615850e-47 |
| Msa0455200 | Msa0667120 | 0.801394 | 9.194007e-49 | -8.615850e-47 |
| Msa0476150 | Msa0667120 | 0.830488 | 2.854487e-55 | -8.615850e-47 |
| Msa0476180 | Msa0667120 | 0.828165 | 1.046320e-54 | -8.615850e-47 |
| Msa0258380 | Msa0667120 | 0.846225 | 2.482066e-59 | -8.615850e-47 |
| Msa0258410 | Msa0667120 | 0.819376 | 1.199663e-52 | -8.615850e-47 |
| Msa0266010 | Msa0667120 | 0.807934 | 3.965612e-50 | -8.615850e-47 |
| Msa0277640 | Msa0667120 | 0.803357 | 3.622966e-49 | -8.615850e-47 |
| Msa0282070 | Msa0667120 | 0.852526 | 4.357144e-61 | -8.615850e-47 |
| Msa0282090 | Msa0667120 | 0.832100 | 1.146119e-55 | -8.615850e-47 |
| Msa0285130 | Msa0667120 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0324010 | Msa0667120 | 0.801163 | 1.024901e-48 | -8.615850e-47 |
| Msa0335740 | Msa0667120 | 0.827284 | 1.702886e-54 | -8.615850e-47 |
| Msa0360200 | Msa0667120 | 0.812308 | 4.525555e-51 | -8.615850e-47 |
| Msa0362840 | Msa0667120 | 0.806822 | 6.825243e-50 | -8.615850e-47 |
| Msa0486200 | Msa0667120 | 0.800670 | 1.292797e-48 | -8.615850e-47 |
| Msa0506760 | Msa0667120 | 0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0510540 | Msa0667120 | 0.833920 | 4.041075e-56 | -8.615850e-47 |
| Msa0524510 | Msa0667120 | 0.809923 | 1.488569e-50 | -8.615850e-47 |
| Msa0555940 | Msa0667120 | 0.815963 | 7.060881e-52 | -8.615850e-47 |
| Msa0557770 | Msa0667120 | 0.808857 | 2.519922e-50 | -8.615850e-47 |
| Msa0563530 | Msa0667120 | 0.804210 | 2.409951e-49 | -8.615850e-47 |
| Msa0567290 | Msa0667120 | 0.814841 | 1.254368e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667120 | MtrunA17_Chr4g0005621 | 93.786 | 515 | 29 | 1 | 1 | 515 | 1 | 512 | 0.0 | 908 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667120 | AT5G01590.1 | 59.553 | 492 | 187 | 6 | 1 | 487 | 1 | 485 | 0.0 | 611 |
Find 180 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATCATGTGTTAAGTATT+TGG | 0.167823 | 4_4:-7352996 | Msa0667120:three_prime_UTR |
| CTAGTCATGCCCTATTTCTT+TGG | 0.190139 | 4_4:-7354308 | Msa0667120:CDS |
| GCACCCATCCACATGATTTA+TGG | 0.221444 | 4_4:-7355587 | Msa0667120:CDS |
| GAAGAATTGTTGGACCATTT+TGG | 0.233980 | 4_4:+7358014 | None:intergenic |
| TTAAAAGAATGGAGATAATT+AGG | 0.279685 | 4_4:-7353319 | Msa0667120:CDS |
| TGCCGCTGGCCCAAAGAAAT+AGG | 0.281357 | 4_4:+7354298 | None:intergenic |
| ATTGATGTTGCTCAAGCTAT+TGG | 0.282613 | 4_4:-7357580 | Msa0667120:CDS |
| CCTCACCGGACAACCTTCTA+AGG | 0.283079 | 4_4:+7353273 | None:intergenic |
| ATGTAGCGCTAGATAAGTTT+TGG | 0.296534 | 4_4:-7357672 | Msa0667120:CDS |
| TGATGCGAAATTTGAGGAAT+TGG | 0.304033 | 4_4:+7358122 | None:intergenic |
| AAGAAAGTTCCGAATATTAC+TGG | 0.305251 | 4_4:-7357736 | Msa0667120:CDS |
| TAGTCATGCCCTATTTCTTT+GGG | 0.306477 | 4_4:-7354307 | Msa0667120:CDS |
| GGAAGAGGGAGGGGAGTTGG+TGG | 0.323057 | 4_4:+7358171 | None:intergenic |
| CCACCATGGGTTCCTGTTAA+GGG | 0.326099 | 4_4:-7354441 | Msa0667120:CDS |
| AGGCTCTATGATGTAATTAA+TGG | 0.326946 | 4_4:-7353425 | Msa0667120:CDS |
| CCGAATATTACTGGGCTTGA+TGG | 0.330395 | 4_4:-7357727 | Msa0667120:CDS |
| AGGTGAGAGGAGGAAGAGGG+AGG | 0.334097 | 4_4:+7358160 | None:intergenic |
| CTCATCAGAAAATGTATAAC+TGG | 0.336241 | 4_4:+7357844 | None:intergenic |
| TTCTTTCACAAACTACAAAA+AGG | 0.338561 | 4_4:-7354468 | Msa0667120:CDS |
| TTCCAAAGCTCTCTATCTTC+AGG | 0.344377 | 4_4:+7357757 | None:intergenic |
| AGGGAGGTGAGAGGAGGAAG+AGG | 0.345181 | 4_4:+7358156 | None:intergenic |
| TCAACCCATTCAACGGAAAC+TGG | 0.347535 | 4_4:-7358209 | Msa0667120:CDS |
| CACTGAACTGACTACTACTT+TGG | 0.348235 | 4_4:-7354277 | Msa0667120:CDS |
| TGTGGTGTGTGTCTGTGGTT+AGG | 0.353718 | 4_4:+7357973 | None:intergenic |
| GCAGACATACCTAAGATCTT+TGG | 0.354976 | 4_4:+7354224 | None:intergenic |
| GGAGGAAGAGGGAGGGGAGT+TGG | 0.357781 | 4_4:+7358168 | None:intergenic |
| AGGGTTTAGTGTTAAGGATA+TGG | 0.357808 | 4_4:+7358285 | None:intergenic |
| AGTGAAAGGGTTTAGTGTTA+AGG | 0.357969 | 4_4:+7358279 | None:intergenic |
| CCAGTTATGAAAATTATAAC+AGG | 0.358973 | 4_4:-7353024 | Msa0667120:three_prime_UTR |
| GTGAGAGGAGGAAGAGGGAG+GGG | 0.360628 | 4_4:+7358162 | None:intergenic |
| CACGGCGGTGGCGGTGGTGG+TGG | 0.362595 | 4_4:+7358068 | None:intergenic |
| CTTAAAACTGCTTGGGGTGG+TGG | 0.364700 | 4_4:-7355659 | Msa0667120:CDS |
| AGTACATTCCCAAAGATCTT+AGG | 0.366281 | 4_4:-7354233 | Msa0667120:intron |
| GCATACACTTAAAACTGCTT+GGG | 0.372364 | 4_4:-7355666 | Msa0667120:CDS |
| GGGAACCAGTTTCCGTTGAA+TGG | 0.379023 | 4_4:+7358204 | None:intergenic |
| GGAATTGGAGGTGTTGGTGG+TGG | 0.380310 | 4_4:+7358089 | None:intergenic |
| TTCCACGGCGGTGGCGGTGG+TGG | 0.381182 | 4_4:+7358065 | None:intergenic |
| ACCACCATGGGTTCCTGTTA+AGG | 0.381373 | 4_4:-7354442 | Msa0667120:CDS |
| TCTCTATCTTCAGGCTTATG+AGG | 0.386828 | 4_4:+7357766 | None:intergenic |
| GTAATGAATGCGAGATTTCC+TGG | 0.388524 | 4_4:-7353380 | Msa0667120:CDS |
| CGCATTCGTAGAAGAATTGT+TGG | 0.389119 | 4_4:+7358004 | None:intergenic |
| ACCCGGTCCATTCACCAAAA+TGG | 0.389918 | 4_4:-7358028 | Msa0667120:CDS |
| GGTGGCGGTGGTGGTGGAAT+TGG | 0.390283 | 4_4:+7358074 | None:intergenic |
| TATGTGGTTAATGCTGATTA+TGG | 0.394521 | 4_4:-7353200 | Msa0667120:three_prime_UTR |
| AGGAATTGGAGAAGTTAAGA+AGG | 0.395738 | 4_4:+7358136 | None:intergenic |
| GGTGAGAGGAGGAAGAGGGA+GGG | 0.397331 | 4_4:+7358161 | None:intergenic |
| TTGATGTTGCTCAAGCTATT+GGG | 0.399807 | 4_4:-7357579 | Msa0667120:CDS |
| ATCTTCCACGGCGGTGGCGG+TGG | 0.402097 | 4_4:+7358062 | None:intergenic |
| GAGTGGTGTATGGTTCTATA+AGG | 0.403771 | 4_4:-7355723 | Msa0667120:CDS |
| ATCTTTGGGAATGTACTTGT+TGG | 0.405106 | 4_4:+7354239 | None:intergenic |
| ATTTCTTGTTCCGTTGCGTT+TGG | 0.405690 | 4_4:+7357907 | None:intergenic |
| TTTGGTGAATGGACCGGGTT+CGG | 0.406508 | 4_4:+7358032 | None:intergenic |
| ACTTCCCATGGCCTCAATCC+TGG | 0.410006 | 4_4:+7353769 | None:intergenic |
| CAGACATACCTAAGATCTTT+GGG | 0.412032 | 4_4:+7354225 | None:intergenic |
| CGGACGTGCAATTTCTTATG+TGG | 0.413041 | 4_4:-7353216 | Msa0667120:three_prime_UTR |
| TGCATACACTTAAAACTGCT+TGG | 0.416294 | 4_4:-7355667 | Msa0667120:CDS |
| TTAAAACTGCTTGGGGTGGT+GGG | 0.417274 | 4_4:-7355658 | Msa0667120:CDS |
| CCATCAAGCCCAGTAATATT+CGG | 0.421071 | 4_4:+7357727 | None:intergenic |
| ATCGGCTTCCCAGGCGGATA+AGG | 0.423726 | 4_4:+7357601 | None:intergenic |
| TGGAGCGTGCAATCGCTACT+TGG | 0.423767 | 4_4:-7355562 | Msa0667120:CDS |
| GGTGGAATTGGAGGTGTTGG+TGG | 0.424099 | 4_4:+7358086 | None:intergenic |
| AAGTTGGCTAAACTAATTCC+AGG | 0.428800 | 4_4:-7353787 | Msa0667120:CDS |
| ATGGTTCTATAAGGATCGGC+TGG | 0.431622 | 4_4:-7355714 | Msa0667120:CDS |
| GCTAATGATGGCCTCTGGCC+TGG | 0.434082 | 4_4:-7354342 | Msa0667120:CDS |
| GGGAGGTGAGAGGAGGAAGA+GGG | 0.436592 | 4_4:+7358157 | None:intergenic |
| TTCATCTTCCACGGCGGTGG+CGG | 0.436783 | 4_4:+7358059 | None:intergenic |
| AGAGAGAGGCCCGCCTTAGA+AGG | 0.441282 | 4_4:-7353286 | Msa0667120:CDS |
| CACATAAGAAATTGCACGTC+CGG | 0.444344 | 4_4:+7353217 | None:intergenic |
| TCTTTGGGAATGTACTTGTT+GGG | 0.450292 | 4_4:+7354240 | None:intergenic |
| CATTACATCACCCGCCAGAT+TGG | 0.451225 | 4_4:+7353397 | None:intergenic |
| AATTAATGGCATCGCCAATC+TGG | 0.452261 | 4_4:-7353411 | Msa0667120:CDS |
| GGAACCAGTTTCCGTTGAAT+GGG | 0.452933 | 4_4:+7358205 | None:intergenic |
| GGTGTTGGTGGTGGAGAGGG+AGG | 0.455281 | 4_4:+7358098 | None:intergenic |
| AAATTATGAAAATGAAATGT+GGG | 0.456150 | 4_4:-7353071 | Msa0667120:three_prime_UTR |
| TTATCATGAGGAGTGGTGTA+TGG | 0.457939 | 4_4:-7355733 | Msa0667120:CDS |
| GGAGGTGTTGGTGGTGGAGA+GGG | 0.458009 | 4_4:+7358095 | None:intergenic |
| ACTGACTACTACTTTGGAAC+AGG | 0.459475 | 4_4:-7354271 | Msa0667120:CDS |
| GCCGCTGGCCCAAAGAAATA+GGG | 0.460604 | 4_4:+7354299 | None:intergenic |
| GTTGTCCGGTGAGGAGGAGG+AGG | 0.461089 | 4_4:-7353264 | Msa0667120:CDS |
| GTCCGGTGAGGAGGAGGAGG+AGG | 0.471148 | 4_4:-7353261 | Msa0667120:CDS |
| GGTGGTGGAATTGGAGGTGT+TGG | 0.472723 | 4_4:+7358083 | None:intergenic |
| AAGGTTGTCCGGTGAGGAGG+AGG | 0.476873 | 4_4:-7353267 | Msa0667120:CDS |
| TGGCAAAGGCCTTATCCGCC+TGG | 0.480703 | 4_4:-7357610 | Msa0667120:CDS |
| GTGGTGTGTGTCTGTGGTTA+GGG | 0.481097 | 4_4:+7357974 | None:intergenic |
| GGAGGATTCTATTAAAAGAA+TGG | 0.482823 | 4_4:-7353330 | Msa0667120:CDS |
| GGCGGTGGTGGTGGAATTGG+AGG | 0.482953 | 4_4:+7358077 | None:intergenic |
| ACACAGGTCCACCATTCATC+AGG | 0.484693 | 4_4:-7353672 | Msa0667120:CDS |
| GGAGGTTGATGCGAAATTTG+AGG | 0.485587 | 4_4:+7358116 | None:intergenic |
| GTCTTCATCTTCCACGGCGG+TGG | 0.487187 | 4_4:+7358056 | None:intergenic |
| GCCCGCCTTAGAAGGTTGTC+CGG | 0.488506 | 4_4:-7353278 | Msa0667120:CDS |
| CTAAACTAATTCCAGGATTG+AGG | 0.489998 | 4_4:-7353780 | Msa0667120:CDS |
| TAATTCCAGGATTGAGGCCA+TGG | 0.496414 | 4_4:-7353774 | Msa0667120:CDS |
| TTCGGTGTCTTCATCTTCCA+CGG | 0.496964 | 4_4:+7358050 | None:intergenic |
| GGGTCGAACCCGAGGGCCAT+TGG | 0.498011 | 4_4:-7355693 | Msa0667120:CDS |
| GGAATTGGAGAAGTTAAGAA+GGG | 0.500696 | 4_4:+7358137 | None:intergenic |
| ATGGATCGAATAACATTCAA+TGG | 0.501205 | 4_4:-7353727 | Msa0667120:CDS |
| TGGAGGTGTTGGTGGTGGAG+AGG | 0.507443 | 4_4:+7358094 | None:intergenic |
| GCATTCCAACGCCTGATGAA+TGG | 0.508612 | 4_4:+7353661 | None:intergenic |
| GCAACATCAATCGGCTTCCC+AGG | 0.509357 | 4_4:+7357592 | None:intergenic |
| GAGACGTGATTTAGCAGTGA+TGG | 0.511406 | 4_4:-7354367 | Msa0667120:CDS |
| ATCAACTTCAACCCATTCAA+CGG | 0.512505 | 4_4:-7358216 | Msa0667120:CDS |
| ATAGCTTGAGCAACATCAAT+CGG | 0.513604 | 4_4:+7357583 | None:intergenic |
| TAAAACTGCTTGGGGTGGTG+GGG | 0.516930 | 4_4:-7355657 | Msa0667120:CDS |
| GAATGGAGATAATTAGGAGG+AGG | 0.517876 | 4_4:-7353313 | Msa0667120:CDS |
| AGTAGTCAGTTCAGTGCCGC+TGG | 0.518023 | 4_4:+7354284 | None:intergenic |
| CATCCACATGATTTATGGAA+TGG | 0.519518 | 4_4:-7355582 | Msa0667120:CDS |
| AAAATTATGAAAATGAAATG+TGG | 0.520486 | 4_4:-7353072 | Msa0667120:three_prime_UTR |
| TGCCGAGAAAAGCGCAGTCA+CGG | 0.525298 | 4_4:-7357696 | Msa0667120:CDS |
| GCTGTGAGATAGACAGAAGT+TGG | 0.526546 | 4_4:-7353803 | Msa0667120:intron |
| AGCCTGAAGATAGAGAGCTT+TGG | 0.530064 | 4_4:-7357759 | Msa0667120:CDS |
| GCCCTATTTCTTTGGGCCAG+CGG | 0.535335 | 4_4:-7354300 | Msa0667120:CDS |
| ACCGGACAACCTTCTAAGGC+GGG | 0.535739 | 4_4:+7353277 | None:intergenic |
| ATGCAATGCCAATGGCCCTC+GGG | 0.536053 | 4_4:+7355685 | None:intergenic |
| AATGGAGATAATTAGGAGGA+GGG | 0.537053 | 4_4:-7353312 | Msa0667120:CDS |
| AAGTTAAGAAGGGAGGTGAG+AGG | 0.537363 | 4_4:+7358147 | None:intergenic |
| GAAGAAGAAGAAGAGTGAAA+GGG | 0.538399 | 4_4:+7358266 | None:intergenic |
| CAAAGAAATAGGGCATGACT+AGG | 0.546517 | 4_4:+7354309 | None:intergenic |
| TGGAAGCTAATGATGGCCTC+TGG | 0.547585 | 4_4:-7354347 | Msa0667120:CDS |
| AATGGCATCGCCAATCTGGC+GGG | 0.552417 | 4_4:-7353407 | Msa0667120:CDS |
| GATCGGCTGGGTCGAACCCG+AGG | 0.552442 | 4_4:-7355701 | Msa0667120:CDS |
| TGACTTGTGGTGTGTGTCTG+TGG | 0.555576 | 4_4:+7357968 | None:intergenic |
| TCAGGCGTTGGAATGCCGAC+AGG | 0.556543 | 4_4:-7353654 | Msa0667120:CDS |
| CACCACCACCGCCACCGCCG+TGG | 0.562117 | 4_4:-7358067 | Msa0667120:CDS |
| GGAGCGTGCAATCGCTACTT+GGG | 0.564345 | 4_4:-7355561 | Msa0667120:CDS |
| CGTGCAATCGCTACTTGGGA+AGG | 0.564518 | 4_4:-7355557 | Msa0667120:intron |
| TAGAAGGTTGTCCGGTGAGG+AGG | 0.567648 | 4_4:-7353270 | Msa0667120:CDS |
| TATGCAATGCCAATGGCCCT+CGG | 0.567783 | 4_4:+7355684 | None:intergenic |
| GGCAAAGGCCTTATCCGCCT+GGG | 0.568013 | 4_4:-7357609 | Msa0667120:CDS |
| TTGAGGACTTTGTTGACTTG+TGG | 0.570285 | 4_4:+7357955 | None:intergenic |
| TTATTGTTTGCAAGATCACA+TGG | 0.571005 | 4_4:-7352970 | Msa0667120:three_prime_UTR |
| TTAAGAAGGGAGGTGAGAGG+AGG | 0.571405 | 4_4:+7358150 | None:intergenic |
| GCAGCTTCAACATGAGGCGG+TGG | 0.574913 | 4_4:-7354397 | Msa0667120:CDS |
| ATATTACTGGGCTTGATGGA+AGG | 0.575453 | 4_4:-7357723 | Msa0667120:CDS |
| TGTACGAACCAAGTGGTTCA+CGG | 0.575523 | 4_4:+7353695 | None:intergenic |
| GTCCACCATTCATCAGGCGT+TGG | 0.577924 | 4_4:-7353666 | Msa0667120:CDS |
| CATTCCATAAATCATGTGGA+TGG | 0.578067 | 4_4:+7355583 | None:intergenic |
| TAATGGCATCGCCAATCTGG+CGG | 0.578144 | 4_4:-7353408 | Msa0667120:CDS |
| AGAAAGTTCCGAATATTACT+GGG | 0.578755 | 4_4:-7357735 | Msa0667120:CDS |
| TGACTAGGAATTCTAACTCC+AGG | 0.578909 | 4_4:+7354324 | None:intergenic |
| AAAGAATGGAGATAATTAGG+AGG | 0.582537 | 4_4:-7353316 | Msa0667120:CDS |
| TCTGAGCATAGAACAAGCAA+TGG | 0.583742 | 4_4:-7353746 | Msa0667120:CDS |
| CACCGGACAACCTTCTAAGG+CGG | 0.584401 | 4_4:+7353276 | None:intergenic |
| ATTGGAGAAGTTAAGAAGGG+AGG | 0.585770 | 4_4:+7358140 | None:intergenic |
| AATTATGAAAATGAAATGTG+GGG | 0.585944 | 4_4:-7353070 | Msa0667120:three_prime_UTR |
| GATTTAGTTATCATGAGGAG+TGG | 0.591381 | 4_4:-7355740 | Msa0667120:intron |
| TCTATGCTCAGAACTTCCCA+TGG | 0.595336 | 4_4:+7353757 | None:intergenic |
| GAAGATGAAGACACCGAACC+CGG | 0.595625 | 4_4:-7358045 | Msa0667120:CDS |
| GTGTATGGTTCTATAAGGAT+CGG | 0.600110 | 4_4:-7355718 | Msa0667120:CDS |
| GAATGGTACCGTGAACCACT+TGG | 0.603216 | 4_4:-7353703 | Msa0667120:CDS |
| AGCTGATAAGATGAATGAGT+GGG | 0.603762 | 4_4:-7357809 | Msa0667120:CDS |
| TAGGAGGAGGGTCAAGAGAG+AGG | 0.605881 | 4_4:-7353300 | Msa0667120:CDS |
| TGGTTCTATAAGGATCGGCT+GGG | 0.606157 | 4_4:-7355713 | Msa0667120:CDS |
| GCAGTGATGGAAGCTAATGA+TGG | 0.607053 | 4_4:-7354354 | Msa0667120:CDS |
| TTAAGTGTATGCAATGCCAA+TGG | 0.608483 | 4_4:+7355677 | None:intergenic |
| ATTCCATAAATCATGTGGAT+GGG | 0.612495 | 4_4:+7355584 | None:intergenic |
| GAATAACATTCAATGGCGAA+TGG | 0.615395 | 4_4:-7353720 | Msa0667120:CDS |
| TATTTGATTTAGTTATCATG+AGG | 0.616799 | 4_4:-7355745 | Msa0667120:intron |
| TATATAGTCAAGTGACGACA+AGG | 0.618881 | 4_4:+7352917 | None:intergenic |
| TTCCAACGCCTGATGAATGG+TGG | 0.620251 | 4_4:+7353664 | None:intergenic |
| CATACACTTAAAACTGCTTG+GGG | 0.623287 | 4_4:-7355665 | Msa0667120:CDS |
| TAGCTGATAAGATGAATGAG+TGG | 0.625483 | 4_4:-7357810 | Msa0667120:CDS |
| GCGTTGGAATGCCGACAGGA+TGG | 0.626966 | 4_4:-7353650 | Msa0667120:intron |
| ATCGGCTGGGTCGAACCCGA+GGG | 0.629123 | 4_4:-7355700 | Msa0667120:CDS |
| ATTATGAAAATGAAATGTGG+GGG | 0.633412 | 4_4:-7353069 | Msa0667120:three_prime_UTR |
| GCTCCATTCCATAAATCATG+TGG | 0.634373 | 4_4:+7355579 | None:intergenic |
| CCTTAGAAGGTTGTCCGGTG+AGG | 0.634727 | 4_4:-7353273 | Msa0667120:CDS |
| TTATAAGCAGCTTCAACATG+AGG | 0.638676 | 4_4:-7354403 | Msa0667120:CDS |
| CCCTTAACAGGAACCCATGG+TGG | 0.643315 | 4_4:+7354441 | None:intergenic |
| AATTCCAGGATTGAGGCCAT+GGG | 0.643550 | 4_4:-7353773 | Msa0667120:CDS |
| AATCCCTTAACAGGAACCCA+TGG | 0.648355 | 4_4:+7354438 | None:intergenic |
| ACACTTAAAACTGCTTGGGG+TGG | 0.657410 | 4_4:-7355662 | Msa0667120:CDS |
| TAAGCAGCTTCAACATGAGG+CGG | 0.663272 | 4_4:-7354400 | Msa0667120:CDS |
| GAATTCTAACTCCAGGCCAG+AGG | 0.668583 | 4_4:+7354331 | None:intergenic |
| AGACACACTTACCATCCTGT+CGG | 0.669599 | 4_4:+7353639 | None:intergenic |
| CGAAGTTAAACCAAACGCAA+CGG | 0.670466 | 4_4:-7357917 | Msa0667120:CDS |
| ACATCAATCGGCTTCCCAGG+CGG | 0.683260 | 4_4:+7357595 | None:intergenic |
| CCACTTGGTTCGTACAACAC+AGG | 0.683947 | 4_4:-7353688 | Msa0667120:CDS |
| GCTTAACTACTCAAACACAG+AGG | 0.775152 | 4_4:+7353172 | None:intergenic |
| GGTGTCTTCATCTTCCACGG+CGG | 0.776497 | 4_4:+7358053 | None:intergenic |
| CCTGTGTTGTACGAACCAAG+TGG | 0.802878 | 4_4:+7353688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATGAAAAATATATTT+AGG | - | chr4_4:7355280-7355299 | Msa0667120:intron | 10.0% |
| !! | TTAATATTAAAAAGATTCAT+CGG | + | chr4_4:7356647-7356666 | None:intergenic | 10.0% |
| !!! | TTTAGTTCAACTATTTTAAT+GGG | + | chr4_4:7354803-7354822 | None:intergenic | 15.0% |
| !! | ATATAATGTAGAAAAAAAAG+TGG | + | chr4_4:7354971-7354990 | None:intergenic | 15.0% |
| !!! | TATATTTTTCATTTTTGACA+AGG | + | chr4_4:7355277-7355296 | None:intergenic | 15.0% |
| !! | ATTAAATAAAGTAAAAAAGG+TGG | + | chr4_4:7355726-7355745 | None:intergenic | 15.0% |
| !! | TATAGTTATCCAAATTTAAT+AGG | - | chr4_4:7356234-7356253 | Msa0667120:intron | 15.0% |
| !!! | AAAAGCATTTAATATCATTT+CGG | + | chr4_4:7356512-7356531 | None:intergenic | 15.0% |
| !! | TTGAACATATTAATACATAA+AGG | + | chr4_4:7357398-7357417 | None:intergenic | 15.0% |
| !!! | ATATGTTCAATTATTTTCTT+TGG | - | chr4_4:7357408-7357427 | Msa0667120:intron | 15.0% |
| !!! | TTTTAGTAATGATATTACAT+TGG | + | chr4_4:7358128-7358147 | None:intergenic | 15.0% |
| !! | AAAATTATGAAAATGAAATG+TGG | - | chr4_4:7358174-7358193 | Msa0667120:CDS | 15.0% |
| !! | AAATTATGAAAATGAAATGT+GGG | - | chr4_4:7358175-7358194 | Msa0667120:CDS | 15.0% |
| !! | GAAATGTATGTAGATATTAT+TGG | - | chr4_4:7354185-7354204 | Msa0667120:intron | 20.0% |
| !!! | GTATCATAAAATACACTTTT+GGG | + | chr4_4:7354401-7354420 | None:intergenic | 20.0% |
| !!! | TGTATCATAAAATACACTTT+TGG | + | chr4_4:7354402-7354421 | None:intergenic | 20.0% |
| !!! | CTTTAGTTCAACTATTTTAA+TGG | + | chr4_4:7354804-7354823 | None:intergenic | 20.0% |
| !!! | AATATCATCTTTGTTTATTG+AGG | - | chr4_4:7355371-7355390 | Msa0667120:intron | 20.0% |
| !! | AACTAAATCAAATAGAAAAC+AGG | + | chr4_4:7355495-7355514 | None:intergenic | 20.0% |
| !!! | TATTTGATTTAGTTATCATG+AGG | - | chr4_4:7355501-7355520 | Msa0667120:intron | 20.0% |
| !! | TTGATAAAAACACTTTCATT+TGG | - | chr4_4:7355615-7355634 | Msa0667120:CDS | 20.0% |
| !! | TGATAAAAACACTTTCATTT+GGG | - | chr4_4:7355616-7355635 | Msa0667120:CDS | 20.0% |
| !! | GGAACATTTACTTATTTATA+AGG | - | chr4_4:7355944-7355963 | Msa0667120:intron | 20.0% |
| !! | TATAATAACTTTGAATACGA+AGG | - | chr4_4:7356051-7356070 | Msa0667120:intron | 20.0% |
| !! | TTGTTGAATCTAAATTTAAC+AGG | - | chr4_4:7356177-7356196 | Msa0667120:intron | 20.0% |
| !! | AGAACAATTCCTATTAAATT+TGG | + | chr4_4:7356246-7356265 | None:intergenic | 20.0% |
| !! | AGGAATAAGACTATTAAATT+TGG | + | chr4_4:7356334-7356353 | None:intergenic | 20.0% |
| !!! | TTTTGTACTTCACTAAAAAA+TGG | - | chr4_4:7356481-7356500 | Msa0667120:intron | 20.0% |
| !!! | ATTTGATAATATCTGATTCT+TGG | - | chr4_4:7356713-7356732 | Msa0667120:intron | 20.0% |
| !! | GTTAGTAACAATAATAAAGT+GGG | + | chr4_4:7357353-7357372 | None:intergenic | 20.0% |
| !! | AGTTAGTAACAATAATAAAG+TGG | + | chr4_4:7357354-7357373 | None:intergenic | 20.0% |
| !! | ACATATTAATACATAAAGGA+GGG | + | chr4_4:7357394-7357413 | None:intergenic | 20.0% |
| !! | AACATATTAATACATAAAGG+AGG | + | chr4_4:7357395-7357414 | None:intergenic | 20.0% |
| !!! | TCAATTATTTTCTTTGGATT+TGG | - | chr4_4:7357414-7357433 | Msa0667120:intron | 20.0% |
| !!! | CAATTATTTTCTTTGGATTT+GGG | - | chr4_4:7357415-7357434 | Msa0667120:intron | 20.0% |
| !!! | AATTATTTTCTTTGGATTTG+GGG | - | chr4_4:7357416-7357435 | Msa0667120:intron | 20.0% |
| !! | ATAAAATTCAGAAAAAAGTC+AGG | - | chr4_4:7357894-7357913 | Msa0667120:CDS | 20.0% |
| !! | TAAAATTCAGAAAAAAGTCA+GGG | - | chr4_4:7357895-7357914 | Msa0667120:CDS | 20.0% |
| !! | TTAAAAGAATGGAGATAATT+AGG | - | chr4_4:7357927-7357946 | Msa0667120:CDS | 20.0% |
| !! | AATTATGAAAATGAAATGTG+GGG | - | chr4_4:7358176-7358195 | Msa0667120:CDS | 20.0% |
| !!! | TGAAAATTATAACAGGTTTT+TGG | - | chr4_4:7358229-7358248 | Msa0667120:exon | 20.0% |
| !! | TTGTAGATTTTGTGTAGTTA+AGG | - | chr4_4:7353778-7353797 | Msa0667120:CDS | 25.0% |
| !!! | TTTTTTCAAGTAAAATGCAG+AGG | - | chr4_4:7354073-7354092 | Msa0667120:intron | 25.0% |
| !!! | CATGCATTTTGTTTTATGTT+TGG | - | chr4_4:7354521-7354540 | Msa0667120:intron | 25.0% |
| !!! | CATTTTGATTTCATTCAAAG+AGG | + | chr4_4:7354946-7354965 | None:intergenic | 25.0% |
| !! | TTTTTGTCAAAAGCTTTCTT+AGG | - | chr4_4:7355050-7355069 | Msa0667120:intron | 25.0% |
| ! | TAAACAAAGATGATATTGAC+TGG | + | chr4_4:7355368-7355387 | None:intergenic | 25.0% |
| ! | GATAAAAACACTTTCATTTG+GGG | - | chr4_4:7355617-7355636 | Msa0667120:CDS | 25.0% |
| ! | ATAAAAACACTTTCATTTGG+GGG | - | chr4_4:7355618-7355637 | Msa0667120:CDS | 25.0% |
| !!! | ATTGCACTACTTTATTTTGA+CGG | + | chr4_4:7355980-7355999 | None:intergenic | 25.0% |
| ! | ATTGTTCTGTATGAGATAAT+AGG | - | chr4_4:7356258-7356277 | Msa0667120:intron | 25.0% |
| ! | TGAGATAATAGGAATATGTT+TGG | - | chr4_4:7356269-7356288 | Msa0667120:intron | 25.0% |
| ! | AACACTTTCATAAACAGATT+TGG | + | chr4_4:7356391-7356410 | None:intergenic | 25.0% |
| ! | AAATATGAAAATTCAGCACT+TGG | + | chr4_4:7356697-7356716 | None:intergenic | 25.0% |
| ! | ATAATATCTGATTCTTGGTT+TGG | - | chr4_4:7356718-7356737 | Msa0667120:intron | 25.0% |
| ! | TTCTTTCACAAACTACAAAA+AGG | - | chr4_4:7356778-7356797 | Msa0667120:intron | 25.0% |
| !! | ATTGTAGTGTTGTTAAATAG+CGG | - | chr4_4:7357133-7357152 | Msa0667120:intron | 25.0% |
| ! | CATATTAATACATAAAGGAG+GGG | + | chr4_4:7357393-7357412 | None:intergenic | 25.0% |
| !! | ATTATTTTCTTTGGATTTGG+GGG | - | chr4_4:7357417-7357436 | Msa0667120:intron | 25.0% |
| ! | AGAAAAGTAGTAATTGGTAA+AGG | + | chr4_4:7357724-7357743 | None:intergenic | 25.0% |
| ! | TGAAACAGAAAAGTAGTAAT+TGG | + | chr4_4:7357730-7357749 | None:intergenic | 25.0% |
| !! | TACTTTTCTGTTTCATATCT+TGG | - | chr4_4:7357735-7357754 | Msa0667120:CDS | 25.0% |
| ! | TATTTGCTTATTATTTGCAG+AGG | - | chr4_4:7357801-7357820 | Msa0667120:CDS | 25.0% |
| !!! | CGATTTATTTTCCTGTTTAT+TGG | - | chr4_4:7358149-7358168 | Msa0667120:CDS | 25.0% |
| !!! | CATAATTTTAGCCAATAAAC+AGG | + | chr4_4:7358163-7358182 | None:intergenic | 25.0% |
| ! | ATTATGAAAATGAAATGTGG+GGG | - | chr4_4:7358177-7358196 | Msa0667120:CDS | 25.0% |
| !! | GTTATAATTTTCATAACTGG+TGG | + | chr4_4:7358222-7358241 | None:intergenic | 25.0% |
| !! | CCTGTTATAATTTTCATAAC+TGG | + | chr4_4:7358225-7358244 | None:intergenic | 25.0% |
| ! | CCAGTTATGAAAATTATAAC+AGG | - | chr4_4:7358222-7358241 | Msa0667120:CDS | 25.0% |
| CTCATCAGAAAATGTATAAC+TGG | + | chr4_4:7353405-7353424 | None:intergenic | 30.0% | |
| AAGAAAGTTCCGAATATTAC+TGG | - | chr4_4:7353510-7353529 | Msa0667120:intron | 30.0% | |
| AGAAAGTTCCGAATATTACT+GGG | - | chr4_4:7353511-7353530 | Msa0667120:intron | 30.0% | |
| !! | TTTTGCTAGACAGTTTTATC+TGG | - | chr4_4:7353599-7353618 | Msa0667120:intron | 30.0% |
| !! | TTTGCTAGACAGTTTTATCT+GGG | - | chr4_4:7353600-7353619 | Msa0667120:intron | 30.0% |
| TTTGATGCAGTCATATGATT+TGG | - | chr4_4:7353810-7353829 | Msa0667120:intron | 30.0% | |
| ! | AGTCATATGATTTGGATTGT+TGG | - | chr4_4:7353818-7353837 | Msa0667120:intron | 30.0% |
| ! | AGTTAGCTTATAGCTTATAG+TGG | - | chr4_4:7353947-7353966 | Msa0667120:intron | 30.0% |
| ACAATCAAATCCCTAATACT+AGG | - | chr4_4:7354423-7354442 | Msa0667120:CDS | 30.0% | |
| GCTTAGATACATAGAATAAG+TGG | + | chr4_4:7354456-7354475 | None:intergenic | 30.0% | |
| TGTAGAGTAACAGAATTTGA+AGG | + | chr4_4:7354620-7354639 | None:intergenic | 30.0% | |
| !! | AAAGTGTTGTTGTCAAATAG+CGG | + | chr4_4:7354663-7354682 | None:intergenic | 30.0% |
| ACTTTGTACTAAATGACCTA+TGG | - | chr4_4:7354678-7354697 | Msa0667120:intron | 30.0% | |
| ACAATAGTATAGACAATCTG+TGG | + | chr4_4:7354999-7355018 | None:intergenic | 30.0% | |
| ATTGTCTATACTATTGTCAC+TGG | - | chr4_4:7355002-7355021 | Msa0667120:intron | 30.0% | |
| !!! | TATTGGCAAGCTATTTTGAT+TGG | + | chr4_4:7355105-7355124 | None:intergenic | 30.0% |
| ! | AATCAAAATAGCTTGCCAAT+AGG | - | chr4_4:7355104-7355123 | Msa0667120:intron | 30.0% |
| ! | ATCAAAATAGCTTGCCAATA+GGG | - | chr4_4:7355105-7355124 | Msa0667120:intron | 30.0% |
| ATGCTTAGGATTGAATATGT+AGG | - | chr4_4:7355147-7355166 | Msa0667120:intron | 30.0% | |
| AGTGGTAAAATACTAAACTC+TGG | - | chr4_4:7355397-7355416 | Msa0667120:intron | 30.0% | |
| GTAAAATACTAAACTCTGGA+TGG | - | chr4_4:7355401-7355420 | Msa0667120:intron | 30.0% | |
| TGAGAAGATACTTGAACTAA+TGG | + | chr4_4:7355438-7355457 | None:intergenic | 30.0% | |
| TAAAAACACTTTCATTTGGG+GGG | - | chr4_4:7355619-7355638 | Msa0667120:CDS | 30.0% | |
| ATTCCATAAATCATGTGGAT+GGG | + | chr4_4:7355665-7355684 | None:intergenic | 30.0% | |
| TATATAAAAGACTGCTCATC+TGG | + | chr4_4:7355775-7355794 | None:intergenic | 30.0% | |
| ! | GATGAGCAGTCTTTTATATA+TGG | - | chr4_4:7355775-7355794 | Msa0667120:intron | 30.0% |
| AATATTTGTGATCATGCACT+TGG | - | chr4_4:7355880-7355899 | Msa0667120:intron | 30.0% | |
| TGTTATACTGGTATCTAGTA+AGG | - | chr4_4:7355923-7355942 | Msa0667120:intron | 30.0% | |
| !!! | TTGCACTACTTTATTTTGAC+GGG | + | chr4_4:7355979-7355998 | None:intergenic | 30.0% |
| ATAACTTTGAATACGAAGGT+TGG | - | chr4_4:7356055-7356074 | Msa0667120:intron | 30.0% | |
| ! | AACAAGTTGAGAAAATCAGT+TGG | + | chr4_4:7356162-7356181 | None:intergenic | 30.0% |
| ACAATTCCTCTTATCTCATA+CGG | + | chr4_4:7356298-7356317 | None:intergenic | 30.0% | |
| AGCTTCTTACTTATTGTTAG+AGG | - | chr4_4:7356539-7356558 | Msa0667120:intron | 30.0% | |
| GCTTCTTACTTATTGTTAGA+GGG | - | chr4_4:7356540-7356559 | Msa0667120:intron | 30.0% | |
| ! | TTCTTTTCAAATCCCTTAAC+AGG | + | chr4_4:7356820-7356839 | None:intergenic | 30.0% |
| ! | TTTTCACTTCCATTTTCACA+AGG | - | chr4_4:7357077-7357096 | Msa0667120:intron | 30.0% |
| TACAGAAAACCTTGTGAAAA+TGG | + | chr4_4:7357089-7357108 | None:intergenic | 30.0% | |
| ! | GGTTTTCTGTAAAATACACA+TGG | - | chr4_4:7357098-7357117 | Msa0667120:intron | 30.0% |
| ATGGATCGAATAACATTCAA+TGG | - | chr4_4:7357519-7357538 | Msa0667120:intron | 30.0% | |
| AATGAATCCAAATCCTTTGA+TGG | + | chr4_4:7357635-7357654 | None:intergenic | 30.0% | |
| AAGTAGTAATTGGTAAAGGA+TGG | + | chr4_4:7357720-7357739 | None:intergenic | 30.0% | |
| AGGCTCTATGATGTAATTAA+TGG | - | chr4_4:7357821-7357840 | Msa0667120:CDS | 30.0% | |
| ! | TTCTGAATTTTATCAAAGCC+AGG | + | chr4_4:7357887-7357906 | None:intergenic | 30.0% |
| GGAGGATTCTATTAAAAGAA+TGG | - | chr4_4:7357916-7357935 | Msa0667120:CDS | 30.0% | |
| AAAGAATGGAGATAATTAGG+AGG | - | chr4_4:7357930-7357949 | Msa0667120:CDS | 30.0% | |
| ! | TATGTGGTTAATGCTGATTA+TGG | - | chr4_4:7358046-7358065 | Msa0667120:CDS | 30.0% |
| GGTATCATGTGTTAAGTATT+TGG | - | chr4_4:7358250-7358269 | Msa0667120:five_prime_UTR | 30.0% | |
| TTATTGTTTGCAAGATCACA+TGG | - | chr4_4:7358276-7358295 | Msa0667120:five_prime_UTR | 30.0% | |
| AGGGTTTAGTGTTAAGGATA+TGG | + | chr4_4:7352964-7352983 | None:intergenic | 35.0% | |
| AGTGAAAGGGTTTAGTGTTA+AGG | + | chr4_4:7352970-7352989 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAGTGAAA+GGG | + | chr4_4:7352983-7353002 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAGTGAA+AGG | + | chr4_4:7352984-7353003 | None:intergenic | 35.0% | |
| ATCAACTTCAACCCATTCAA+CGG | - | chr4_4:7353030-7353049 | Msa0667120:three_prime_UTR | 35.0% | |
| GGAATTGGAGAAGTTAAGAA+GGG | + | chr4_4:7353112-7353131 | None:intergenic | 35.0% | |
| AGGAATTGGAGAAGTTAAGA+AGG | + | chr4_4:7353113-7353132 | None:intergenic | 35.0% | |
| TGATGCGAAATTTGAGGAAT+TGG | + | chr4_4:7353127-7353146 | None:intergenic | 35.0% | |
| ! | GAAGAATTGTTGGACCATTT+TGG | + | chr4_4:7353235-7353254 | None:intergenic | 35.0% |
| TAGCTGATAAGATGAATGAG+TGG | - | chr4_4:7353436-7353455 | Msa0667120:intron | 35.0% | |
| AGCTGATAAGATGAATGAGT+GGG | - | chr4_4:7353437-7353456 | Msa0667120:intron | 35.0% | |
| ! | ATGTAGCGCTAGATAAGTTT+TGG | - | chr4_4:7353574-7353593 | Msa0667120:intron | 35.0% |
| ! | TGTAGCGCTAGATAAGTTTT+GGG | - | chr4_4:7353575-7353594 | Msa0667120:intron | 35.0% |
| !! | TTGCTAGACAGTTTTATCTG+GGG | - | chr4_4:7353601-7353620 | Msa0667120:intron | 35.0% |
| !! | ACAGTTTTATCTGGGGATTT+GGG | - | chr4_4:7353608-7353627 | Msa0667120:intron | 35.0% |
| ATAGCTTGAGCAACATCAAT+CGG | + | chr4_4:7353666-7353685 | None:intergenic | 35.0% | |
| ATTGATGTTGCTCAAGCTAT+TGG | - | chr4_4:7353666-7353685 | Msa0667120:CDS | 35.0% | |
| TTGATGTTGCTCAAGCTATT+GGG | - | chr4_4:7353667-7353686 | Msa0667120:CDS | 35.0% | |
| GCTGATAAGAGAGCTTATAA+TGG | - | chr4_4:7353899-7353918 | Msa0667120:intron | 35.0% | |
| CGAATTGAATTTGCAGTGTT+TGG | - | chr4_4:7353979-7353998 | Msa0667120:intron | 35.0% | |
| GCAGTGTTTGGTAAAATTAC+TGG | - | chr4_4:7353991-7354010 | Msa0667120:intron | 35.0% | |
| ! | GTTAGAGAAAGCACACAATA+TGG | + | chr4_4:7354131-7354150 | None:intergenic | 35.0% |
| TGCTTATGAATAGCAAACCA+TGG | + | chr4_4:7354307-7354326 | None:intergenic | 35.0% | |
| ATTCTACTCTATAGCTTTCC+TGG | - | chr4_4:7354371-7354390 | Msa0667120:CDS | 35.0% | |
| !! | AATACACTTTTGGGTAAACC+AGG | + | chr4_4:7354392-7354411 | None:intergenic | 35.0% |
| ! | TACTTTTCAGCTTTGCAGAT+AGG | - | chr4_4:7354480-7354499 | Msa0667120:CDS | 35.0% |
| GGATAAATGAGACAACTGTT+CGG | + | chr4_4:7354836-7354855 | None:intergenic | 35.0% | |
| TATCCTGAATGACAAGCATA+TGG | - | chr4_4:7354851-7354870 | Msa0667120:intron | 35.0% | |
| ATAGTATAGACAATCTGTGG+TGG | + | chr4_4:7354996-7355015 | None:intergenic | 35.0% | |
| ! | TCAAAATAGCTTGCCAATAG+GGG | - | chr4_4:7355106-7355125 | Msa0667120:intron | 35.0% |
| ! | CTTTGTTTATTGAGGTTCAG+TGG | - | chr4_4:7355379-7355398 | Msa0667120:intron | 35.0% |
| !! | TGTGTTGTTTCTGTGTATGA+TGG | - | chr4_4:7355465-7355484 | Msa0667120:intron | 35.0% |
| GATTTAGTTATCATGAGGAG+TGG | - | chr4_4:7355506-7355525 | Msa0667120:intron | 35.0% | |
| ! | GTGTATGGTTCTATAAGGAT+CGG | - | chr4_4:7355528-7355547 | Msa0667120:intron | 35.0% |
| TTAAGTGTATGCAATGCCAA+TGG | + | chr4_4:7355572-7355591 | None:intergenic | 35.0% | |
| TGCATACACTTAAAACTGCT+TGG | - | chr4_4:7355579-7355598 | Msa0667120:CDS | 35.0% | |
| GCATACACTTAAAACTGCTT+GGG | - | chr4_4:7355580-7355599 | Msa0667120:CDS | 35.0% | |
| CATACACTTAAAACTGCTTG+GGG | - | chr4_4:7355581-7355600 | Msa0667120:CDS | 35.0% | |
| CATTCCATAAATCATGTGGA+TGG | + | chr4_4:7355666-7355685 | None:intergenic | 35.0% | |
| CATCCACATGATTTATGGAA+TGG | - | chr4_4:7355664-7355683 | Msa0667120:CDS | 35.0% | |
| ! | TTTGCCTAACAACCATTTTG+AGG | - | chr4_4:7355820-7355839 | Msa0667120:intron | 35.0% |
| TTCTTACACATGCCTCAAAA+TGG | + | chr4_4:7355835-7355854 | None:intergenic | 35.0% | |
| AACAGGAATTGTTCTGTATG+AGG | - | chr4_4:7356194-7356213 | Msa0667120:intron | 35.0% | |
| ATTGTTCTGTATGAGGTAAG+AGG | - | chr4_4:7356201-7356220 | Msa0667120:intron | 35.0% | |
| TTAGAGGGATTCTTACTACA+TGG | - | chr4_4:7356555-7356574 | Msa0667120:intron | 35.0% | |
| AGAAAGTTATGCACATGAAC+TGG | + | chr4_4:7356605-7356624 | None:intergenic | 35.0% | |
| ! | TACAAAAAGGTATACCACCA+TGG | - | chr4_4:7356791-7356810 | Msa0667120:intron | 35.0% |
| ! | ACAAAAAGGTATACCACCAT+GGG | - | chr4_4:7356792-7356811 | Msa0667120:intron | 35.0% |
| TTATAAGCAGCTTCAACATG+AGG | - | chr4_4:7356843-7356862 | Msa0667120:intron | 35.0% | |
| ! | TAGTCATGCCCTATTTCTTT+GGG | - | chr4_4:7356939-7356958 | Msa0667120:intron | 35.0% |
| ! | TCTTTGGGAATGTACTTGTT+GGG | + | chr4_4:7357009-7357028 | None:intergenic | 35.0% |
| ! | ATCTTTGGGAATGTACTTGT+TGG | + | chr4_4:7357010-7357029 | None:intergenic | 35.0% |
| AGTACATTCCCAAAGATCTT+AGG | - | chr4_4:7357013-7357032 | Msa0667120:intron | 35.0% | |
| CAGACATACCTAAGATCTTT+GGG | + | chr4_4:7357024-7357043 | None:intergenic | 35.0% | |
| TCGTATTGAATAGCGTATTG+TGG | + | chr4_4:7357211-7357230 | None:intergenic | 35.0% | |
| ! | GCTATAACACTGTTGTTTAG+TGG | - | chr4_4:7357258-7357277 | Msa0667120:intron | 35.0% |
| CAATAATAAAGTGGGCAATG+TGG | + | chr4_4:7357345-7357364 | None:intergenic | 35.0% | |
| AAGTTGGCTAAACTAATTCC+AGG | - | chr4_4:7357459-7357478 | Msa0667120:intron | 35.0% | |
| CTAAACTAATTCCAGGATTG+AGG | - | chr4_4:7357466-7357485 | Msa0667120:intron | 35.0% | |
| GAATAACATTCAATGGCGAA+TGG | - | chr4_4:7357526-7357545 | Msa0667120:intron | 35.0% | |
| TAAGTGTGTCTTTCCATCAA+AGG | - | chr4_4:7357619-7357638 | Msa0667120:CDS | 35.0% | |
| TGTCTTTCCATCAAAGGATT+TGG | - | chr4_4:7357625-7357644 | Msa0667120:CDS | 35.0% | |
| CTGTTTCATATCTTGGTAGA+TGG | - | chr4_4:7357742-7357761 | Msa0667120:CDS | 35.0% | |
| AATTCAGAAAAAAGTCAGGG+AGG | - | chr4_4:7357898-7357917 | Msa0667120:CDS | 35.0% | |
| AATGGAGATAATTAGGAGGA+GGG | - | chr4_4:7357934-7357953 | Msa0667120:CDS | 35.0% | |
| CGGCCAAAAAATTAGAATTC+CGG | - | chr4_4:7358010-7358029 | Msa0667120:CDS | 35.0% | |
| !!! | CGTCCGGAATTCTAATTTTT+TGG | + | chr4_4:7358016-7358035 | None:intergenic | 35.0% |
| TATATAGTCAAGTGACGACA+AGG | + | chr4_4:7358332-7358351 | None:intergenic | 35.0% | |
| !!! | GAGTTGGTGGTTTTGAGAAT+GGG | + | chr4_4:7353065-7353084 | None:intergenic | 40.0% |
| ATTGGAGAAGTTAAGAAGGG+AGG | + | chr4_4:7353109-7353128 | None:intergenic | 40.0% | |
| !! | TGTTGGACCATTTTGGTGAA+TGG | + | chr4_4:7353228-7353247 | None:intergenic | 40.0% |
| CGCATTCGTAGAAGAATTGT+TGG | + | chr4_4:7353245-7353264 | None:intergenic | 40.0% | |
| !! | TTGAGGACTTTGTTGACTTG+TGG | + | chr4_4:7353294-7353313 | None:intergenic | 40.0% |
| CGAAGTTAAACCAAACGCAA+CGG | - | chr4_4:7353329-7353348 | Msa0667120:CDS | 40.0% | |
| ATTTCTTGTTCCGTTGCGTT+TGG | + | chr4_4:7353342-7353361 | None:intergenic | 40.0% | |
| TCTCTATCTTCAGGCTTATG+AGG | + | chr4_4:7353483-7353502 | None:intergenic | 40.0% | |
| TTCCAAAGCTCTCTATCTTC+AGG | + | chr4_4:7353492-7353511 | None:intergenic | 40.0% | |
| CCATCAAGCCCAGTAATATT+CGG | + | chr4_4:7353522-7353541 | None:intergenic | 40.0% | |
| ATATTACTGGGCTTGATGGA+AGG | - | chr4_4:7353523-7353542 | Msa0667120:intron | 40.0% | |
| !! | GACAGTTTTATCTGGGGATT+TGG | - | chr4_4:7353607-7353626 | Msa0667120:intron | 40.0% |
| !! | CAGTTTTATCTGGGGATTTG+GGG | - | chr4_4:7353609-7353628 | Msa0667120:intron | 40.0% |
| !! | AGTTTTATCTGGGGATTTGG+GGG | - | chr4_4:7353610-7353629 | Msa0667120:intron | 40.0% |
| !! | CTTGTTGTTGTCACTGCATT+TGG | - | chr4_4:7353754-7353773 | Msa0667120:CDS | 40.0% |
| ATTGTCCGCACTTATAGCAT+AGG | - | chr4_4:7353847-7353866 | Msa0667120:intron | 40.0% | |
| GTGTGCTTTCTCTAACCTTA+TGG | - | chr4_4:7354135-7354154 | Msa0667120:intron | 40.0% | |
| AAGGACACTTGGATTCCATA+AGG | + | chr4_4:7354153-7354172 | None:intergenic | 40.0% | |
| TTGATACTCCAACACATCCA+TGG | - | chr4_4:7354287-7354306 | Msa0667120:CDS | 40.0% | |
| ATAGCAAACCATGGATGTGT+TGG | + | chr4_4:7354298-7354317 | None:intergenic | 40.0% | |
| TGGCGTTACTCCTAGTATTA+GGG | + | chr4_4:7354436-7354455 | None:intergenic | 40.0% | |
| TGTTGTCAAATAGCGGCTAA+TGG | + | chr4_4:7354656-7354675 | None:intergenic | 40.0% | |
| TGTACTAAATGACCTATGGC+TGG | - | chr4_4:7354682-7354701 | Msa0667120:intron | 40.0% | |
| !! | TATTTAGTTCTGCCCATCTG+TGG | + | chr4_4:7354882-7354901 | None:intergenic | 40.0% |
| GCTTAGTTAGCAAGATGCTT+AGG | - | chr4_4:7355133-7355152 | Msa0667120:intron | 40.0% | |
| ! | ATTAGTTAGCCTAACTCCTG+TGG | + | chr4_4:7355226-7355245 | None:intergenic | 40.0% |
| TTATCATGAGGAGTGGTGTA+TGG | - | chr4_4:7355513-7355532 | Msa0667120:intron | 40.0% | |
| ! | GAGTGGTGTATGGTTCTATA+AGG | - | chr4_4:7355523-7355542 | Msa0667120:intron | 40.0% |
| GCTCCATTCCATAAATCATG+TGG | + | chr4_4:7355670-7355689 | None:intergenic | 40.0% | |
| CATGCCTCAAAATGGTTGTT+AGG | + | chr4_4:7355827-7355846 | None:intergenic | 40.0% | |
| ATACCAGTATAACACACCTG+TGG | + | chr4_4:7355917-7355936 | None:intergenic | 40.0% | |
| GTAGCAAGTCTCCAAATTTG+AGG | - | chr4_4:7356115-7356134 | Msa0667120:intron | 40.0% | |
| TGGTTACCGTATGAGATAAG+AGG | - | chr4_4:7356289-7356308 | Msa0667120:intron | 40.0% | |
| TTGACAAAGGGGTGAATCTA+AGG | - | chr4_4:7356361-7356380 | Msa0667120:intron | 40.0% | |
| TGACTAGGAATTCTAACTCC+AGG | + | chr4_4:7356925-7356944 | None:intergenic | 40.0% | |
| CAAAGAAATAGGGCATGACT+AGG | + | chr4_4:7356940-7356959 | None:intergenic | 40.0% | |
| ! | CTAGTCATGCCCTATTTCTT+TGG | - | chr4_4:7356938-7356957 | Msa0667120:intron | 40.0% |
| CACTGAACTGACTACTACTT+TGG | - | chr4_4:7356969-7356988 | Msa0667120:intron | 40.0% | |
| !! | ACTGACTACTACTTTGGAAC+AGG | - | chr4_4:7356975-7356994 | Msa0667120:intron | 40.0% |
| GCAGACATACCTAAGATCTT+TGG | + | chr4_4:7357025-7357044 | None:intergenic | 40.0% | |
| AAGATCTTAGGTATGTCTGC+TGG | - | chr4_4:7357025-7357044 | Msa0667120:intron | 40.0% | |
| CCAATAGTGCTATAGCATAG+CGG | - | chr4_4:7357162-7357181 | Msa0667120:intron | 40.0% | |
| TTAATACATAAAGGAGGGGC+AGG | + | chr4_4:7357389-7357408 | None:intergenic | 40.0% | |
| TCTGAGCATAGAACAAGCAA+TGG | - | chr4_4:7357500-7357519 | Msa0667120:intron | 40.0% | |
| GGTAGATGGCAAATGTGAAT+TGG | - | chr4_4:7357756-7357775 | Msa0667120:CDS | 40.0% | |
| AATTAATGGCATCGCCAATC+TGG | - | chr4_4:7357835-7357854 | Msa0667120:CDS | 40.0% | |
| GTAATGAATGCGAGATTTCC+TGG | - | chr4_4:7357866-7357885 | Msa0667120:CDS | 40.0% | |
| GAATGGAGATAATTAGGAGG+AGG | - | chr4_4:7357933-7357952 | Msa0667120:CDS | 40.0% | |
| CACATAAGAAATTGCACGTC+CGG | + | chr4_4:7358032-7358051 | None:intergenic | 40.0% | |
| GCTTAACTACTCAAACACAG+AGG | + | chr4_4:7358077-7358096 | None:intergenic | 40.0% | |
| TCAACCCATTCAACGGAAAC+TGG | - | chr4_4:7353037-7353056 | Msa0667120:three_prime_UTR | 45.0% | |
| GGAACCAGTTTCCGTTGAAT+GGG | + | chr4_4:7353044-7353063 | None:intergenic | 45.0% | |
| !!! | GGAGTTGGTGGTTTTGAGAA+TGG | + | chr4_4:7353066-7353085 | None:intergenic | 45.0% |
| AAGTTAAGAAGGGAGGTGAG+AGG | + | chr4_4:7353102-7353121 | None:intergenic | 45.0% | |
| !! | GGAGGTTGATGCGAAATTTG+AGG | + | chr4_4:7353133-7353152 | None:intergenic | 45.0% |
| !! | TTCGGTGTCTTCATCTTCCA+CGG | + | chr4_4:7353199-7353218 | None:intergenic | 45.0% |
| !! | ACCATTTTGGTGAATGGACC+GGG | + | chr4_4:7353222-7353241 | None:intergenic | 45.0% |
| !! | GACCATTTTGGTGAATGGAC+CGG | + | chr4_4:7353223-7353242 | None:intergenic | 45.0% |
| AGCCTGAAGATAGAGAGCTT+TGG | - | chr4_4:7353487-7353506 | Msa0667120:intron | 45.0% | |
| CCGAATATTACTGGGCTTGA+TGG | - | chr4_4:7353519-7353538 | Msa0667120:intron | 45.0% | |
| ! | CTTATAGCATAGGCTCGGTT+TGG | - | chr4_4:7353857-7353876 | Msa0667120:intron | 45.0% |
| GTGGCGTTACTCCTAGTATT+AGG | + | chr4_4:7354437-7354456 | None:intergenic | 45.0% | |
| ATGACCTATGGCTGGATAAC+TGG | - | chr4_4:7354690-7354709 | Msa0667120:intron | 45.0% | |
| AACACCAGTTATCCAGCCAT+AGG | + | chr4_4:7354697-7354716 | None:intergenic | 45.0% | |
| GTGCCATATGCTTGTCATTC+AGG | + | chr4_4:7354857-7354876 | None:intergenic | 45.0% | |
| CATATGGCACAACCACAGAT+GGG | - | chr4_4:7354867-7354886 | Msa0667120:intron | 45.0% | |
| ! | AATAGCTTGCCAATAGGGGA+CGG | - | chr4_4:7355110-7355129 | Msa0667120:intron | 45.0% |
| ! | CAATTGAGCTACTTTGCCAC+AGG | - | chr4_4:7355207-7355226 | Msa0667120:intron | 45.0% |
| ! | ATGGTTCTATAAGGATCGGC+TGG | - | chr4_4:7355532-7355551 | Msa0667120:intron | 45.0% |
| ! | TGGTTCTATAAGGATCGGCT+GGG | - | chr4_4:7355533-7355552 | Msa0667120:intron | 45.0% |
| ACACTTAAAACTGCTTGGGG+TGG | - | chr4_4:7355584-7355603 | Msa0667120:CDS | 45.0% | |
| TTAAAACTGCTTGGGGTGGT+GGG | - | chr4_4:7355588-7355607 | Msa0667120:CDS | 45.0% | |
| AAACACTTTCATTTGGGGGG+AGG | - | chr4_4:7355622-7355641 | Msa0667120:CDS | 45.0% | |
| GCACCCATCCACATGATTTA+TGG | - | chr4_4:7355659-7355678 | Msa0667120:CDS | 45.0% | |
| AGTCCACAGGTGTGTTATAC+TGG | - | chr4_4:7355911-7355930 | Msa0667120:intron | 45.0% | |
| CTCAGTCACAGCCTCAAATT+TGG | + | chr4_4:7356129-7356148 | None:intergenic | 45.0% | |
| ATTCCTCCCTCAGTTGACAA+AGG | - | chr4_4:7356348-7356367 | Msa0667120:intron | 45.0% | |
| TTCCTCCCTCAGTTGACAAA+GGG | - | chr4_4:7356349-7356368 | Msa0667120:intron | 45.0% | |
| TTCACCCCTTTGTCAACTGA+GGG | + | chr4_4:7356357-7356376 | None:intergenic | 45.0% | |
| ATTCACCCCTTTGTCAACTG+AGG | + | chr4_4:7356358-7356377 | None:intergenic | 45.0% | |
| AATCCCTTAACAGGAACCCA+TGG | + | chr4_4:7356811-7356830 | None:intergenic | 45.0% | |
| TAAGCAGCTTCAACATGAGG+CGG | - | chr4_4:7356846-7356865 | Msa0667120:intron | 45.0% | |
| GAGACGTGATTTAGCAGTGA+TGG | - | chr4_4:7356879-7356898 | Msa0667120:intron | 45.0% | |
| ! | GCAGTGATGGAAGCTAATGA+TGG | - | chr4_4:7356892-7356911 | Msa0667120:intron | 45.0% |
| CCGCTATGCTATAGCACTAT+TGG | + | chr4_4:7357165-7357184 | None:intergenic | 45.0% | |
| GCTGTGAGATAGACAGAAGT+TGG | - | chr4_4:7357443-7357462 | Msa0667120:intron | 45.0% | |
| TAATTCCAGGATTGAGGCCA+TGG | - | chr4_4:7357472-7357491 | Msa0667120:intron | 45.0% | |
| AATTCCAGGATTGAGGCCAT+GGG | - | chr4_4:7357473-7357492 | Msa0667120:intron | 45.0% | |
| TCTATGCTCAGAACTTCCCA+TGG | + | chr4_4:7357492-7357511 | None:intergenic | 45.0% | |
| TGTACGAACCAAGTGGTTCA+CGG | + | chr4_4:7357554-7357573 | None:intergenic | 45.0% | |
| AGACACACTTACCATCCTGT+CGG | + | chr4_4:7357610-7357629 | None:intergenic | 45.0% | |
| CGGACGTGCAATTTCTTATG+TGG | - | chr4_4:7358030-7358049 | Msa0667120:CDS | 45.0% | |
| !! | TAATATATAATTAATTACTA+TGG | - | chr4_4:7355319-7355338 | Msa0667120:intron | 5.0% |
| !! | TTTATTAAATAAAGTAAAAA+AGG | + | chr4_4:7355729-7355748 | None:intergenic | 5.0% |
| GGGAACCAGTTTCCGTTGAA+TGG | + | chr4_4:7353045-7353064 | None:intergenic | 50.0% | |
| TTAAGAAGGGAGGTGAGAGG+AGG | + | chr4_4:7353099-7353118 | None:intergenic | 50.0% | |
| GAAGATGAAGACACCGAACC+CGG | - | chr4_4:7353201-7353220 | Msa0667120:three_prime_UTR | 50.0% | |
| TTTGGTGAATGGACCGGGTT+CGG | + | chr4_4:7353217-7353236 | None:intergenic | 50.0% | |
| ACCCGGTCCATTCACCAAAA+TGG | - | chr4_4:7353218-7353237 | Msa0667120:three_prime_UTR | 50.0% | |
| GTGGTGTGTGTCTGTGGTTA+GGG | + | chr4_4:7353275-7353294 | None:intergenic | 50.0% | |
| TGTGGTGTGTGTCTGTGGTT+AGG | + | chr4_4:7353276-7353295 | None:intergenic | 50.0% | |
| ! | TGACTTGTGGTGTGTGTCTG+TGG | + | chr4_4:7353281-7353300 | None:intergenic | 50.0% |
| !! | CGTATGCGTCGTTTTCGTTG+AGG | + | chr4_4:7353311-7353330 | None:intergenic | 50.0% |
| ! | TACCGTGACTGCGCTTTTCT+CGG | + | chr4_4:7353555-7353574 | None:intergenic | 50.0% |
| ! | ATCTGGGGATTTGGGGGTTT+TGG | - | chr4_4:7353616-7353635 | Msa0667120:intron | 50.0% |
| !! | GGATTTGGGGGTTTTGGCAA+AGG | - | chr4_4:7353622-7353641 | Msa0667120:intron | 50.0% |
| CCGAGCCTATGCTATAAGTG+CGG | + | chr4_4:7353855-7353874 | None:intergenic | 50.0% | |
| CCGCACTTATAGCATAGGCT+CGG | - | chr4_4:7353852-7353871 | Msa0667120:intron | 50.0% | |
| AATCCAAGTGTCCTTGCGAG+AGG | - | chr4_4:7354158-7354177 | Msa0667120:intron | 50.0% | |
| ACATTTCTCGTCCTCTCGCA+AGG | + | chr4_4:7354172-7354191 | None:intergenic | 50.0% | |
| GCATATGGCACAACCACAGA+TGG | - | chr4_4:7354866-7354885 | Msa0667120:intron | 50.0% | |
| ! | ATAGCTTGCCAATAGGGGAC+GGG | - | chr4_4:7355111-7355130 | Msa0667120:intron | 50.0% |
| TAACTAAGCCCGTCCCCTAT+TGG | + | chr4_4:7355122-7355141 | None:intergenic | 50.0% | |
| ! | GCTACTTTGCCACAGGAGTT+AGG | - | chr4_4:7355214-7355233 | Msa0667120:intron | 50.0% |
| TATGCAATGCCAATGGCCCT+CGG | + | chr4_4:7355565-7355584 | None:intergenic | 50.0% | |
| CTTAAAACTGCTTGGGGTGG+TGG | - | chr4_4:7355587-7355606 | Msa0667120:CDS | 50.0% | |
| TAAAACTGCTTGGGGTGGTG+GGG | - | chr4_4:7355589-7355608 | Msa0667120:CDS | 50.0% | |
| TTTCATTTGGGGGGAGGACA+TGG | - | chr4_4:7355628-7355647 | Msa0667120:CDS | 50.0% | |
| CTTGGATACTCACAGTCCAC+AGG | - | chr4_4:7355898-7355917 | Msa0667120:intron | 50.0% | |
| TGAGGCTGTGACTGAGAGTT+TGG | - | chr4_4:7356133-7356152 | Msa0667120:intron | 50.0% | |
| TCCTCCCTCAGTTGACAAAG+GGG | - | chr4_4:7356350-7356369 | Msa0667120:intron | 50.0% | |
| ACCACCATGGGTTCCTGTTA+AGG | - | chr4_4:7356804-7356823 | Msa0667120:intron | 50.0% | |
| CCACCATGGGTTCCTGTTAA+GGG | - | chr4_4:7356805-7356824 | Msa0667120:intron | 50.0% | |
| TGGAAGCTAATGATGGCCTC+TGG | - | chr4_4:7356899-7356918 | Msa0667120:intron | 50.0% | |
| GAATTCTAACTCCAGGCCAG+AGG | + | chr4_4:7356918-7356937 | None:intergenic | 50.0% | |
| GAATGGTACCGTGAACCACT+TGG | - | chr4_4:7357543-7357562 | Msa0667120:intron | 50.0% | |
| CCTGTGTTGTACGAACCAAG+TGG | + | chr4_4:7357561-7357580 | None:intergenic | 50.0% | |
| ! | CCACTTGGTTCGTACAACAC+AGG | - | chr4_4:7357558-7357577 | Msa0667120:CDS | 50.0% |
| ACACAGGTCCACCATTCATC+AGG | - | chr4_4:7357574-7357593 | Msa0667120:CDS | 50.0% | |
| TTCCAACGCCTGATGAATGG+TGG | + | chr4_4:7357585-7357604 | None:intergenic | 50.0% | |
| GCATTCCAACGCCTGATGAA+TGG | + | chr4_4:7357588-7357607 | None:intergenic | 50.0% | |
| TAATGGCATCGCCAATCTGG+CGG | - | chr4_4:7357838-7357857 | Msa0667120:CDS | 50.0% | |
| CATTACATCACCCGCCAGAT+TGG | + | chr4_4:7357852-7357871 | None:intergenic | 50.0% | |
| ! | TGAAATGTGGGGGAAGTGTG+AGG | - | chr4_4:7358187-7358206 | Msa0667120:CDS | 50.0% |
| !! | GGAATTGGAGGTGTTGGTGG+TGG | + | chr4_4:7353160-7353179 | None:intergenic | 55.0% |
| !! | GGTGGAATTGGAGGTGTTGG+TGG | + | chr4_4:7353163-7353182 | None:intergenic | 55.0% |
| !! | GGTGGTGGAATTGGAGGTGT+TGG | + | chr4_4:7353166-7353185 | None:intergenic | 55.0% |
| GGTGTCTTCATCTTCCACGG+CGG | + | chr4_4:7353196-7353215 | None:intergenic | 55.0% | |
| ! | GACTGCGCTTTTCTCGGCAT+AGG | + | chr4_4:7353549-7353568 | None:intergenic | 55.0% |
| ! | TGCCGAGAAAAGCGCAGTCA+CGG | - | chr4_4:7353550-7353569 | Msa0667120:intron | 55.0% |
| ! | ACATCAATCGGCTTCCCAGG+CGG | + | chr4_4:7353654-7353673 | None:intergenic | 55.0% |
| ! | GCAACATCAATCGGCTTCCC+AGG | + | chr4_4:7353657-7353676 | None:intergenic | 55.0% |
| ATGCAATGCCAATGGCCCTC+GGG | + | chr4_4:7355564-7355583 | None:intergenic | 55.0% | |
| GGGGGAGGACATGGATGAAT+GGG | - | chr4_4:7355637-7355656 | Msa0667120:CDS | 55.0% | |
| TGGAGCGTGCAATCGCTACT+TGG | - | chr4_4:7355684-7355703 | Msa0667120:CDS | 55.0% | |
| GGAGCGTGCAATCGCTACTT+GGG | - | chr4_4:7355685-7355704 | Msa0667120:CDS | 55.0% | |
| CGTGCAATCGCTACTTGGGA+AGG | - | chr4_4:7355689-7355708 | Msa0667120:CDS | 55.0% | |
| ACCCCTTTGTCAACTGAGGG+AGG | + | chr4_4:7356354-7356373 | None:intergenic | 55.0% | |
| CCCTTAACAGGAACCCATGG+TGG | + | chr4_4:7356808-7356827 | None:intergenic | 55.0% | |
| ! | GCCCTATTTCTTTGGGCCAG+CGG | - | chr4_4:7356946-7356965 | Msa0667120:intron | 55.0% |
| GCCGCTGGCCCAAAGAAATA+GGG | + | chr4_4:7356950-7356969 | None:intergenic | 55.0% | |
| TGCCGCTGGCCCAAAGAAAT+AGG | + | chr4_4:7356951-7356970 | None:intergenic | 55.0% | |
| AGTAGTCAGTTCAGTGCCGC+TGG | + | chr4_4:7356965-7356984 | None:intergenic | 55.0% | |
| TACATAAAGGAGGGGCAGGC+AGG | + | chr4_4:7357385-7357404 | None:intergenic | 55.0% | |
| ACTTCCCATGGCCTCAATCC+TGG | + | chr4_4:7357480-7357499 | None:intergenic | 55.0% | |
| GTCCACCATTCATCAGGCGT+TGG | - | chr4_4:7357580-7357599 | Msa0667120:CDS | 55.0% | |
| AATGGCATCGCCAATCTGGC+GGG | - | chr4_4:7357839-7357858 | Msa0667120:CDS | 55.0% | |
| TAGGAGGAGGGTCAAGAGAG+AGG | - | chr4_4:7357946-7357965 | Msa0667120:CDS | 55.0% | |
| !! | ACCGGACAACCTTCTAAGGC+GGG | + | chr4_4:7357972-7357991 | None:intergenic | 55.0% |
| ! | CACCGGACAACCTTCTAAGG+CGG | + | chr4_4:7357973-7357992 | None:intergenic | 55.0% |
| CCTCACCGGACAACCTTCTA+AGG | + | chr4_4:7357976-7357995 | None:intergenic | 55.0% | |
| CCTTAGAAGGTTGTCCGGTG+AGG | - | chr4_4:7357973-7357992 | Msa0667120:CDS | 55.0% | |
| TAGAAGGTTGTCCGGTGAGG+AGG | - | chr4_4:7357976-7357995 | Msa0667120:CDS | 55.0% | |
| GTGAGAGGAGGAAGAGGGAG+GGG | + | chr4_4:7353087-7353106 | None:intergenic | 60.0% | |
| GGTGAGAGGAGGAAGAGGGA+GGG | + | chr4_4:7353088-7353107 | None:intergenic | 60.0% | |
| AGGTGAGAGGAGGAAGAGGG+AGG | + | chr4_4:7353089-7353108 | None:intergenic | 60.0% | |
| GGGAGGTGAGAGGAGGAAGA+GGG | + | chr4_4:7353092-7353111 | None:intergenic | 60.0% | |
| AGGGAGGTGAGAGGAGGAAG+AGG | + | chr4_4:7353093-7353112 | None:intergenic | 60.0% | |
| !! | GGAGGTGTTGGTGGTGGAGA+GGG | + | chr4_4:7353154-7353173 | None:intergenic | 60.0% |
| !! | TGGAGGTGTTGGTGGTGGAG+AGG | + | chr4_4:7353155-7353174 | None:intergenic | 60.0% |
| TTCATCTTCCACGGCGGTGG+CGG | + | chr4_4:7353190-7353209 | None:intergenic | 60.0% | |
| GTCTTCATCTTCCACGGCGG+TGG | + | chr4_4:7353193-7353212 | None:intergenic | 60.0% | |
| ! | TGGCAAAGGCCTTATCCGCC+TGG | - | chr4_4:7353636-7353655 | Msa0667120:intron | 60.0% |
| ! | GGCAAAGGCCTTATCCGCCT+GGG | - | chr4_4:7353637-7353656 | Msa0667120:intron | 60.0% |
| ! | ATCGGCTTCCCAGGCGGATA+AGG | + | chr4_4:7353648-7353667 | None:intergenic | 60.0% |
| CGTCCTCTCGCAAGGACACT+TGG | + | chr4_4:7354164-7354183 | None:intergenic | 60.0% | |
| GGGGGGAGGACATGGATGAA+TGG | - | chr4_4:7355636-7355655 | Msa0667120:CDS | 60.0% | |
| GCAGCTTCAACATGAGGCGG+TGG | - | chr4_4:7356849-7356868 | Msa0667120:intron | 60.0% | |
| GCTAATGATGGCCTCTGGCC+TGG | - | chr4_4:7356904-7356923 | Msa0667120:intron | 60.0% | |
| !! | TCAGGCGTTGGAATGCCGAC+AGG | - | chr4_4:7357592-7357611 | Msa0667120:CDS | 60.0% |
| GCGTTGGAATGCCGACAGGA+TGG | - | chr4_4:7357596-7357615 | Msa0667120:CDS | 60.0% | |
| AGAGAGAGGCCCGCCTTAGA+AGG | - | chr4_4:7357960-7357979 | Msa0667120:CDS | 60.0% | |
| GCCCGCCTTAGAAGGTTGTC+CGG | - | chr4_4:7357968-7357987 | Msa0667120:CDS | 60.0% | |
| AAGGTTGTCCGGTGAGGAGG+AGG | - | chr4_4:7357979-7357998 | Msa0667120:CDS | 60.0% | |
| TTCCTCCTCCTCCTCCTCAC+CGG | + | chr4_4:7357990-7358009 | None:intergenic | 60.0% | |
| GTGAGGAGGAGGAGGAGGAA+CGG | - | chr4_4:7357990-7358009 | Msa0667120:CDS | 60.0% | |
| GGAAGAGGGAGGGGAGTTGG+TGG | + | chr4_4:7353078-7353097 | None:intergenic | 65.0% | |
| GGAGGAAGAGGGAGGGGAGT+TGG | + | chr4_4:7353081-7353100 | None:intergenic | 65.0% | |
| !! | GGTGTTGGTGGTGGAGAGGG+AGG | + | chr4_4:7353151-7353170 | None:intergenic | 65.0% |
| !! | GGCGGTGGTGGTGGAATTGG+AGG | + | chr4_4:7353172-7353191 | None:intergenic | 65.0% |
| !! | GGTGGCGGTGGTGGTGGAAT+TGG | + | chr4_4:7353175-7353194 | None:intergenic | 65.0% |
| ATCGGCTGGGTCGAACCCGA+GGG | - | chr4_4:7355546-7355565 | Msa0667120:intron | 65.0% | |
| GTTGTCCGGTGAGGAGGAGG+AGG | - | chr4_4:7357982-7358001 | Msa0667120:CDS | 65.0% | |
| ! | ATCTTCCACGGCGGTGGCGG+TGG | + | chr4_4:7353187-7353206 | None:intergenic | 70.0% |
| GATCGGCTGGGTCGAACCCG+AGG | - | chr4_4:7355545-7355564 | Msa0667120:intron | 70.0% | |
| GGGTCGAACCCGAGGGCCAT+TGG | - | chr4_4:7355553-7355572 | Msa0667120:intron | 70.0% | |
| GTCCGGTGAGGAGGAGGAGG+AGG | - | chr4_4:7357985-7358004 | Msa0667120:CDS | 70.0% | |
| ! | TTCCACGGCGGTGGCGGTGG+TGG | + | chr4_4:7353184-7353203 | None:intergenic | 75.0% |
| !! | CACGGCGGTGGCGGTGGTGG+TGG | + | chr4_4:7353181-7353200 | None:intergenic | 80.0% |
| ! | CACCACCACCGCCACCGCCG+TGG | - | chr4_4:7353179-7353198 | Msa0667120:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 7352902 | 7358366 | 7352902 | ID=Msa0667120;Name=Msa0667120 |
| chr4_4 | mRNA | 7352902 | 7358366 | 7352902 | ID=Msa0667120-mRNA-1;Parent=Msa0667120;Name=Msa0667120-mRNA-1;_AED=0.03;_eAED=0.03;_QI=119|1|1|1|1|1|5|342|515 |
| chr4_4 | exon | 7352902 | 7353447 | 7352902 | ID=Msa0667120-mRNA-1:exon:2397;Parent=Msa0667120-mRNA-1 |
| chr4_4 | exon | 7353651 | 7353813 | 7353651 | ID=Msa0667120-mRNA-1:exon:2396;Parent=Msa0667120-mRNA-1 |
| chr4_4 | exon | 7354234 | 7354516 | 7354234 | ID=Msa0667120-mRNA-1:exon:2395;Parent=Msa0667120-mRNA-1 |
| chr4_4 | exon | 7355558 | 7355755 | 7355558 | ID=Msa0667120-mRNA-1:exon:2394;Parent=Msa0667120-mRNA-1 |
| chr4_4 | exon | 7357548 | 7358366 | 7357548 | ID=Msa0667120-mRNA-1:exon:2393;Parent=Msa0667120-mRNA-1 |
| chr4_4 | five_prime_UTR | 7358248 | 7358366 | 7358248 | ID=Msa0667120-mRNA-1:five_prime_utr;Parent=Msa0667120-mRNA-1 |
| chr4_4 | CDS | 7357548 | 7358247 | 7357548 | ID=Msa0667120-mRNA-1:cds;Parent=Msa0667120-mRNA-1 |
| chr4_4 | CDS | 7355558 | 7355755 | 7355558 | ID=Msa0667120-mRNA-1:cds;Parent=Msa0667120-mRNA-1 |
| chr4_4 | CDS | 7354234 | 7354516 | 7354234 | ID=Msa0667120-mRNA-1:cds;Parent=Msa0667120-mRNA-1 |
| chr4_4 | CDS | 7353651 | 7353813 | 7353651 | ID=Msa0667120-mRNA-1:cds;Parent=Msa0667120-mRNA-1 |
| chr4_4 | CDS | 7353244 | 7353447 | 7353244 | ID=Msa0667120-mRNA-1:cds;Parent=Msa0667120-mRNA-1 |
| chr4_4 | three_prime_UTR | 7352902 | 7353243 | 7352902 | ID=Msa0667120-mRNA-1:three_prime_utr;Parent=Msa0667120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
