Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798060 | RHN54041.1 | 81.818 | 165 | 20 | 3 | 15 | 169 | 187 | 351 | 1.60e-79 | 253 |
| Msa0798060 | RHN54041.1 | 81.818 | 253 | 29 | 3 | 1 | 236 | 1 | 253 | 1.47e-136 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798060 | sp|Q9ZQE6|CML30_ARATH | 47.407 | 135 | 61 | 3 | 43 | 168 | 45 | 178 | 9.88e-35 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798060 | A0A396HNG4 | 81.818 | 165 | 20 | 3 | 15 | 169 | 187 | 351 | 7.63e-80 | 253 |
| Msa0798060 | A0A396HNG4 | 81.818 | 253 | 29 | 3 | 1 | 236 | 1 | 253 | 7.01e-137 | 398 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0798060 | -0.810561 | 1.084156e-50 | -8.615850e-47 |
| Msa0011720 | Msa0798060 | 0.821827 | 3.281783e-53 | -8.615850e-47 |
| Msa0050730 | Msa0798060 | 0.826791 | 2.234240e-54 | -8.615850e-47 |
| Msa0050760 | Msa0798060 | 0.820995 | 5.108984e-53 | -8.615850e-47 |
| Msa0090030 | Msa0798060 | 0.801713 | 7.906790e-49 | -8.615850e-47 |
| Msa0694250 | Msa0798060 | 0.801350 | 9.385906e-49 | -8.615850e-47 |
| Msa0714960 | Msa0798060 | 0.880852 | 3.902122e-70 | -8.615850e-47 |
| Msa0715110 | Msa0798060 | 0.874630 | 5.812943e-68 | -8.615850e-47 |
| Msa0715120 | Msa0798060 | 0.899739 | 1.469749e-77 | -8.615850e-47 |
| Msa0715140 | Msa0798060 | 0.861057 | 1.340088e-63 | -8.615850e-47 |
| Msa0715150 | Msa0798060 | 0.866782 | 2.216499e-65 | -8.615850e-47 |
| Msa0757050 | Msa0798060 | 0.889485 | 2.322117e-73 | -8.615850e-47 |
| Msa0757080 | Msa0798060 | 0.828261 | 9.918285e-55 | -8.615850e-47 |
| Msa0765010 | Msa0798060 | 0.814996 | 1.159096e-51 | -8.615850e-47 |
| Msa0798030 | Msa0798060 | 0.874754 | 5.272831e-68 | -8.615850e-47 |
| Msa0798060 | Msa0798070 | 0.908146 | 2.351548e-81 | -8.615850e-47 |
| Msa0798060 | Msa0836320 | 0.816693 | 4.848228e-52 | -8.615850e-47 |
| Msa0798060 | Msa0836620 | 0.914257 | 2.369425e-84 | -8.615850e-47 |
| Msa0798060 | Msa0836630 | 0.871328 | 7.428777e-67 | -8.615850e-47 |
| Msa0798060 | Msa0908170 | 0.863649 | 2.141186e-64 | -8.615850e-47 |
| Msa0798060 | Msa0933440 | 0.818001 | 2.461012e-52 | -8.615850e-47 |
| Msa0798060 | Msa0946080 | 0.809296 | 2.029468e-50 | -8.615850e-47 |
| Msa0798060 | Msa0959010 | 0.828897 | 6.961824e-55 | -8.615850e-47 |
| Msa0798060 | Msa0993530 | 0.818064 | 2.381968e-52 | -8.615850e-47 |
| Msa0798060 | Msa1015060 | 0.815533 | 8.803072e-52 | -8.615850e-47 |
| Msa0798060 | Msa1048700 | 0.803159 | 3.981545e-49 | -8.615850e-47 |
| Msa0798060 | Msa1087470 | 0.838185 | 3.341115e-57 | -8.615850e-47 |
| Msa0798060 | Msa1092820 | 0.811831 | 5.750739e-51 | -8.615850e-47 |
| Msa0798060 | Msa1130210 | -0.811911 | 5.524991e-51 | -8.615850e-47 |
| Msa0798060 | Msa1185540 | 0.810055 | 1.394304e-50 | -8.615850e-47 |
| Msa0798060 | Msa1219430 | 0.802059 | 6.712878e-49 | -8.615850e-47 |
| Msa0798060 | Msa1221900 | 0.822349 | 2.484887e-53 | -8.615850e-47 |
| Msa0798060 | Msa1249920 | 0.807567 | 4.746619e-50 | -8.615850e-47 |
| Msa0798060 | Msa1265070 | 0.815470 | 9.093748e-52 | -8.615850e-47 |
| Msa0798060 | Msa1267840 | 0.803105 | 4.085198e-49 | -8.615850e-47 |
| Msa0798060 | Msa1337730 | 0.827095 | 1.890774e-54 | -8.615850e-47 |
| Msa0798060 | Msa1360890 | -0.802379 | 5.769800e-49 | -8.615850e-47 |
| Msa0798060 | Msa1370650 | 0.814415 | 1.558533e-51 | -8.615850e-47 |
| Msa0798060 | Msa1408790 | 0.835152 | 1.981569e-56 | -8.615850e-47 |
| Msa0798060 | Msa1415130 | 0.801856 | 7.391156e-49 | -8.615850e-47 |
| Msa0798060 | Msa1422840 | 0.804188 | 2.434924e-49 | -8.615850e-47 |
| Msa0798060 | Msa1436040 | 0.839035 | 2.015367e-57 | -8.615850e-47 |
| Msa0798060 | Msa1440600 | 0.822663 | 2.100001e-53 | -8.615850e-47 |
| Msa0151690 | Msa0798060 | 0.809337 | 1.989051e-50 | -8.615850e-47 |
| Msa0223290 | Msa0798060 | 0.817712 | 2.861096e-52 | -8.615850e-47 |
| Msa0223380 | Msa0798060 | 0.831123 | 1.995205e-55 | -8.615850e-47 |
| Msa0233610 | Msa0798060 | 0.819770 | 9.755306e-53 | -8.615850e-47 |
| Msa0377530 | Msa0798060 | 0.838976 | 2.088261e-57 | -8.615850e-47 |
| Msa0388030 | Msa0798060 | -0.802085 | 6.630782e-49 | -8.615850e-47 |
| Msa0426330 | Msa0798060 | 0.819817 | 9.517920e-53 | -8.615850e-47 |
| Msa0426810 | Msa0798060 | 0.811033 | 8.568682e-51 | -8.615850e-47 |
| Msa0442250 | Msa0798060 | 0.805958 | 1.038046e-49 | -8.615850e-47 |
| Msa0464420 | Msa0798060 | 0.803177 | 3.948868e-49 | -8.615850e-47 |
| Msa0464900 | Msa0798060 | 0.835726 | 1.418526e-56 | -8.615850e-47 |
| Msa0473240 | Msa0798060 | 0.821188 | 4.610569e-53 | -8.615850e-47 |
| Msa0288320 | Msa0798060 | 0.820661 | 6.095958e-53 | -8.615850e-47 |
| Msa0302650 | Msa0798060 | 0.814334 | 1.624447e-51 | -8.615850e-47 |
| Msa0304700 | Msa0798060 | 0.818327 | 2.076844e-52 | -8.615850e-47 |
| Msa0335040 | Msa0798060 | 0.804107 | 2.531174e-49 | -8.615850e-47 |
| Msa0505060 | Msa0798060 | 0.836637 | 8.326119e-57 | -8.615850e-47 |
| Msa0506940 | Msa0798060 | 0.801972 | 6.997842e-49 | -8.615850e-47 |
| Msa0517490 | Msa0798060 | 0.839598 | 1.439479e-57 | -8.615850e-47 |
| Msa0547400 | Msa0798060 | 0.808481 | 3.032685e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798060 | MtrunA17_Chr5g0402361 | 81.818 | 253 | 29 | 3 | 1 | 236 | 1 | 253 | 1.35e-140 | 398 |
| Msa0798060 | MtrunA17_Chr5g0402361 | 81.818 | 165 | 20 | 3 | 15 | 169 | 187 | 351 | 1.47e-83 | 253 |
| Msa0798060 | MtrunA17_Chr5g0402331 | 82.682 | 179 | 21 | 3 | 1 | 169 | 1 | 179 | 1.75e-96 | 280 |
| Msa0798060 | MtrunA17_Chr5g0402331 | 84.058 | 69 | 11 | 0 | 168 | 236 | 13 | 81 | 1.89e-34 | 122 |
| Msa0798060 | MtrunA17_Chr4g0044961 | 43.147 | 197 | 93 | 5 | 1 | 179 | 1 | 196 | 5.06e-42 | 141 |
| Msa0798060 | MtrunA17_Chr5g0402351 | 80.000 | 85 | 14 | 1 | 32 | 113 | 7 | 91 | 1.29e-39 | 132 |
| Msa0798060 | MtrunA17_Chr5g0402351 | 77.551 | 49 | 11 | 0 | 187 | 235 | 7 | 55 | 3.16e-18 | 77.4 |
| Msa0798060 | MtrunA17_Chr1g0161211 | 38.650 | 163 | 84 | 6 | 18 | 168 | 18 | 176 | 6.52e-26 | 100 |
| Msa0798060 | MtrunA17_Chr8g0391691 | 43.182 | 132 | 63 | 4 | 48 | 168 | 36 | 166 | 5.51e-25 | 97.4 |
| Msa0798060 | MtrunA17_Chr3g0111371 | 37.594 | 133 | 71 | 3 | 45 | 168 | 2 | 131 | 3.00e-22 | 89.0 |
| Msa0798060 | MtrunA17_Chr5g0434951 | 40.152 | 132 | 68 | 3 | 47 | 168 | 3 | 133 | 8.50e-21 | 85.1 |
| Msa0798060 | MtrunA17_Chr1g0169581 | 35.714 | 140 | 76 | 4 | 47 | 173 | 3 | 141 | 4.80e-19 | 80.5 |
| Msa0798060 | MtrunA17_Chr7g0245911 | 37.500 | 144 | 69 | 5 | 47 | 170 | 46 | 188 | 9.51e-19 | 81.3 |
| Msa0798060 | MtrunA17_Chr8g0392951 | 35.036 | 137 | 78 | 3 | 42 | 168 | 18 | 153 | 1.25e-18 | 80.1 |
| Msa0798060 | MtrunA17_Chr8g0351681 | 37.589 | 141 | 70 | 5 | 48 | 170 | 49 | 189 | 1.88e-18 | 80.5 |
| Msa0798060 | MtrunA17_Chr4g0033601 | 36.496 | 137 | 73 | 4 | 44 | 168 | 3 | 137 | 1.09e-17 | 77.0 |
| Msa0798060 | MtrunA17_Chr6g0482731 | 33.333 | 132 | 78 | 2 | 47 | 168 | 25 | 156 | 3.53e-17 | 76.6 |
| Msa0798060 | MtrunA17_Chr2g0329371 | 33.526 | 173 | 94 | 4 | 10 | 168 | 33 | 198 | 3.72e-17 | 77.4 |
| Msa0798060 | MtrunA17_Chr7g0256171 | 38.346 | 133 | 70 | 3 | 48 | 168 | 5 | 137 | 1.89e-15 | 71.2 |
| Msa0798060 | MtrunA17_Chr3g0121191 | 38.462 | 130 | 62 | 4 | 48 | 168 | 93 | 213 | 2.60e-14 | 69.7 |
| Msa0798060 | MtrunA17_Chr1g0169621 | 32.704 | 159 | 70 | 4 | 47 | 168 | 3 | 161 | 2.72e-14 | 68.6 |
| Msa0798060 | MtrunA17_Chr7g0256701 | 32.847 | 137 | 77 | 3 | 48 | 169 | 73 | 209 | 8.92e-14 | 68.2 |
| Msa0798060 | MtrunA17_Chr7g0225921 | 34.375 | 128 | 72 | 3 | 52 | 168 | 10 | 136 | 1.65e-13 | 65.9 |
| Msa0798060 | MtrunA17_Chr3g0116151 | 31.250 | 128 | 79 | 2 | 50 | 168 | 8 | 135 | 3.82e-13 | 64.7 |
| Msa0798060 | MtrunA17_Chr3g0116141 | 31.250 | 128 | 79 | 2 | 50 | 168 | 7 | 134 | 4.27e-13 | 64.7 |
| Msa0798060 | MtrunA17_Chr8g0366401 | 29.787 | 141 | 84 | 5 | 48 | 174 | 17 | 156 | 5.21e-13 | 65.1 |
| Msa0798060 | MtrunA17_Chr1g0188171 | 33.571 | 140 | 77 | 4 | 50 | 176 | 14 | 150 | 7.87e-13 | 64.3 |
| Msa0798060 | MtrunA17_Chr6g0459231 | 30.952 | 126 | 78 | 2 | 52 | 168 | 12 | 137 | 8.42e-13 | 63.9 |
| Msa0798060 | MtrunA17_Chr3g0093271 | 30.939 | 181 | 103 | 6 | 1 | 168 | 22 | 193 | 1.29e-12 | 64.7 |
| Msa0798060 | MtrunA17_Chr7g0254731 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 1.09e-11 | 60.8 |
| Msa0798060 | MtrunA17_Chr4g0057661 | 30.769 | 130 | 81 | 2 | 48 | 168 | 6 | 135 | 1.19e-11 | 60.8 |
| Msa0798060 | MtrunA17_Chr1g0185001 | 31.206 | 141 | 85 | 3 | 40 | 168 | 1 | 141 | 1.22e-11 | 60.8 |
| Msa0798060 | MtrunA17_Chr4g0057641 | 30.769 | 130 | 81 | 2 | 48 | 168 | 6 | 135 | 2.37e-11 | 59.7 |
| Msa0798060 | MtrunA17_Chr4g0064231 | 30.159 | 189 | 95 | 6 | 17 | 168 | 24 | 212 | 3.28e-11 | 61.2 |
| Msa0798060 | MtrunA17_Chr5g0440931 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 3.74e-11 | 59.7 |
| Msa0798060 | MtrunA17_Chr6g0460211 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 4.05e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798060 | AT2G15680.1 | 47.407 | 135 | 61 | 3 | 43 | 168 | 45 | 178 | 1.00e-35 | 125 |
| Msa0798060 | AT1G24620.1 | 42.069 | 145 | 70 | 5 | 48 | 179 | 37 | 180 | 1.01e-24 | 97.1 |
| Msa0798060 | AT5G37770.1 | 38.235 | 136 | 70 | 3 | 47 | 168 | 16 | 151 | 6.48e-22 | 89.0 |
| Msa0798060 | AT5G37770.2 | 38.235 | 136 | 70 | 3 | 47 | 168 | 16 | 151 | 6.48e-22 | 89.0 |
| Msa0798060 | AT5G17470.1 | 37.857 | 140 | 75 | 4 | 52 | 179 | 6 | 145 | 1.73e-20 | 84.7 |
| Msa0798060 | AT3G03400.1 | 40.800 | 125 | 60 | 4 | 52 | 163 | 9 | 132 | 2.08e-20 | 84.3 |
| Msa0798060 | AT1G18210.2 | 36.090 | 133 | 73 | 3 | 45 | 168 | 20 | 149 | 5.30e-20 | 84.3 |
| Msa0798060 | AT1G18210.1 | 36.090 | 133 | 73 | 3 | 45 | 168 | 20 | 149 | 5.30e-20 | 84.3 |
| Msa0798060 | AT1G66400.1 | 36.765 | 136 | 70 | 4 | 47 | 168 | 14 | 147 | 1.94e-19 | 82.4 |
| Msa0798060 | AT5G42380.1 | 29.944 | 177 | 109 | 4 | 3 | 168 | 8 | 180 | 2.05e-19 | 83.2 |
| Msa0798060 | AT1G73630.1 | 34.459 | 148 | 84 | 4 | 38 | 175 | 9 | 153 | 5.70e-18 | 78.6 |
| Msa0798060 | AT2G36180.1 | 37.762 | 143 | 76 | 4 | 49 | 178 | 1 | 143 | 9.74e-18 | 77.4 |
| Msa0798060 | AT3G59440.1 | 36.296 | 135 | 69 | 5 | 48 | 168 | 51 | 182 | 2.35e-16 | 75.1 |
| Msa0798060 | AT2G43290.1 | 34.783 | 138 | 73 | 3 | 48 | 168 | 65 | 202 | 3.24e-16 | 75.1 |
| Msa0798060 | AT3G50770.1 | 30.726 | 179 | 107 | 6 | 7 | 168 | 21 | 199 | 4.03e-15 | 72.0 |
| Msa0798060 | AT1G76650.1 | 30.534 | 131 | 82 | 2 | 48 | 169 | 43 | 173 | 1.37e-14 | 70.1 |
| Msa0798060 | AT1G76650.3 | 30.534 | 131 | 82 | 2 | 48 | 169 | 43 | 173 | 1.37e-14 | 70.1 |
| Msa0798060 | AT1G05990.1 | 37.313 | 134 | 71 | 3 | 48 | 168 | 5 | 138 | 2.42e-14 | 68.6 |
| Msa0798060 | AT1G32250.1 | 27.857 | 140 | 83 | 4 | 47 | 169 | 15 | 153 | 1.93e-13 | 66.6 |
| Msa0798060 | AT3G07490.1 | 34.586 | 133 | 75 | 3 | 48 | 168 | 5 | 137 | 4.08e-13 | 65.5 |
| Msa0798060 | AT3G50360.1 | 29.814 | 161 | 98 | 4 | 18 | 168 | 2 | 157 | 7.22e-13 | 65.1 |
| Msa0798060 | AT2G41410.1 | 27.273 | 176 | 96 | 6 | 10 | 169 | 45 | 204 | 1.65e-12 | 65.1 |
| Msa0798060 | AT4G03290.1 | 34.559 | 136 | 74 | 3 | 48 | 168 | 5 | 140 | 3.54e-12 | 62.8 |
| Msa0798060 | AT4G14640.1 | 34.328 | 134 | 72 | 4 | 48 | 168 | 13 | 143 | 3.65e-12 | 62.8 |
| Msa0798060 | AT2G17890.1 | 30.000 | 150 | 87 | 3 | 53 | 192 | 420 | 561 | 9.05e-12 | 64.7 |
| Msa0798060 | AT2G27030.3 | 33.566 | 143 | 79 | 4 | 48 | 177 | 12 | 151 | 1.61e-11 | 61.6 |
| Msa0798060 | AT4G12860.1 | 37.956 | 137 | 71 | 5 | 45 | 168 | 2 | 137 | 2.05e-11 | 60.8 |
| Msa0798060 | AT3G43810.2 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 2.73e-11 | 61.6 |
| Msa0798060 | AT5G21274.1 | 35.075 | 134 | 71 | 4 | 48 | 168 | 12 | 142 | 2.78e-11 | 60.5 |
| Msa0798060 | AT1G66410.1 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 2.99e-11 | 60.1 |
| Msa0798060 | AT5G37780.1 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 2.99e-11 | 60.1 |
| Msa0798060 | AT3G56800.1 | 35.075 | 134 | 71 | 4 | 48 | 168 | 12 | 142 | 3.62e-11 | 60.1 |
| Msa0798060 | AT2G41110.1 | 35.075 | 134 | 71 | 4 | 48 | 168 | 12 | 142 | 3.62e-11 | 60.1 |
| Msa0798060 | AT2G27030.1 | 35.075 | 134 | 71 | 4 | 48 | 168 | 12 | 142 | 3.62e-11 | 60.1 |
| Msa0798060 | AT2G17290.1 | 33.077 | 130 | 78 | 3 | 49 | 170 | 391 | 519 | 4.23e-11 | 62.8 |
| Msa0798060 | AT2G17290.2 | 33.077 | 130 | 78 | 3 | 49 | 170 | 391 | 519 | 4.23e-11 | 62.8 |
| Msa0798060 | AT3G22930.1 | 32.824 | 131 | 78 | 3 | 48 | 168 | 35 | 165 | 4.88e-11 | 60.1 |
| Msa0798060 | AT3G43810.1 | 34.328 | 134 | 72 | 4 | 48 | 168 | 12 | 142 | 5.59e-11 | 59.3 |
| Msa0798060 | AT2G41100.7 | 31.548 | 168 | 84 | 7 | 90 | 231 | 22 | 184 | 8.28e-11 | 61.2 |
| Msa0798060 | AT2G41100.6 | 31.548 | 168 | 84 | 7 | 90 | 231 | 22 | 184 | 8.28e-11 | 61.2 |
| Msa0798060 | AT2G41100.3 | 31.548 | 168 | 84 | 7 | 90 | 231 | 22 | 184 | 8.28e-11 | 61.2 |
| Msa0798060 | AT1G76640.1 | 30.935 | 139 | 83 | 4 | 43 | 169 | 18 | 155 | 8.43e-11 | 59.3 |
Find 45 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCATTTCATCTTTCTT+TGG | 0.177414 | 5_3:-10631957 | None:intergenic |
| GTCAGAGTCCATGGCTTTAA+AGG | 0.182070 | 5_3:-10625545 | None:intergenic |
| TTTCAAGTATTTGATATAAA+TGG | 0.216373 | 5_3:+10625655 | Msa0798060:CDS |
| CATTTCATTTCATCTTTGTT+TGG | 0.257292 | 5_3:-10625412 | None:intergenic |
| CATAGACTTTAAAGAGTTCA+TGG | 0.277650 | 5_3:+10625579 | Msa0798060:CDS |
| CTTTGGTTGGAAACTCATTT+CGG | 0.311430 | 5_3:-10631940 | None:intergenic |
| CCTTAGTGCTTGTAAGAAAA+TGG | 0.341545 | 5_3:+10625741 | Msa0798060:CDS |
| AAAAGCTACCATGAAACTTT+AGG | 0.342938 | 5_3:-10625300 | None:intergenic |
| ATGAGTTTCCTAAAGTTTCA+TGG | 0.347349 | 5_3:+10625292 | Msa0798060:CDS |
| CAAACAAAGATGAAATGAAA+TGG | 0.356222 | 5_3:+10625413 | Msa0798060:CDS |
| CAAAGAAAGATGAAATGAAA+TGG | 0.359646 | 5_3:+10631958 | Msa0798060:CDS |
| CAAAGATGGCAAGATTAGTC+TGG | 0.375293 | 5_3:+10632004 | Msa0798060:CDS |
| GCTGCAAAAGCTTTGGATAA+GGG | 0.402200 | 5_3:+10625496 | Msa0798060:CDS |
| GCTGCAAGAGCTTTGGATAA+GGG | 0.408921 | 5_3:+10632041 | Msa0798060:CDS |
| TAAAGCAGCTGCAAAAGCTT+TGG | 0.411228 | 5_3:+10625489 | Msa0798060:CDS |
| TCATTTCATCTTTGTTTGGT+TGG | 0.412203 | 5_3:-10625408 | None:intergenic |
| GTTTGGTTGGAAACTCATTT+CGG | 0.423204 | 5_3:-10625395 | None:intergenic |
| TAAAGCAGCTGCAAGAGCTT+TGG | 0.424129 | 5_3:+10632034 | Msa0798060:CDS |
| TCATTTCATCTTTCTTTGGT+TGG | 0.424902 | 5_3:-10631953 | None:intergenic |
| AAGCTTTGGATAAGGGGATT+GGG | 0.425029 | 5_3:+10625503 | Msa0798060:CDS |
| AGCTGCAAGAGCTTTGGATA+AGG | 0.430049 | 5_3:+10632040 | Msa0798060:CDS |
| AGCTGCAAAAGCTTTGGATA+AGG | 0.434736 | 5_3:+10625495 | Msa0798060:CDS |
| AAAGCTTTGGATAAGGGGAT+TGG | 0.463563 | 5_3:+10625502 | Msa0798060:CDS |
| AAAGAAAGATGAAATGAAAT+GGG | 0.477872 | 5_3:+10631959 | Msa0798060:CDS |
| AAACAAAGATGAAATGAAAT+GGG | 0.481253 | 5_3:+10625414 | Msa0798060:CDS |
| GCCATCTTTGTCAGAGTCCA+TGG | 0.488944 | 5_3:-10625554 | None:intergenic |
| CTGCAAAAGCTTTGGATAAG+GGG | 0.499395 | 5_3:+10625497 | Msa0798060:CDS |
| CTGCAAGAGCTTTGGATAAG+GGG | 0.527383 | 5_3:+10632042 | Msa0798060:CDS |
| AAAATGGTGAAAGGTGTTGA+TGG | 0.531030 | 5_3:+10625757 | Msa0798060:CDS |
| AGCTTTGGATAAGGGGATTG+GGG | 0.547088 | 5_3:+10625504 | Msa0798060:CDS |
| GTATTTGATATAAATGGTGA+TGG | 0.547891 | 5_3:+10625661 | Msa0798060:CDS |
| GAGTTCATGGAAATGTTCAA+TGG | 0.548455 | 5_3:+10625592 | Msa0798060:CDS |
| AAAGATGGCAAGATTAGTCT+GGG | 0.558498 | 5_3:+10632005 | Msa0798060:CDS |
| GGGTAGTAAGATAAAAGAAG+AGG | 0.559838 | 5_3:+10625618 | Msa0798060:CDS |
| GGTGTTGATGGTGATGGAGA+TGG | 0.571699 | 5_3:+10625769 | Msa0798060:CDS |
| AAATTTGACACAAACAAAGA+TGG | 0.579839 | 5_3:+10625445 | Msa0798060:CDS |
| GTGAAAGGTGTTGATGGTGA+TGG | 0.580268 | 5_3:+10625763 | Msa0798060:CDS |
| ATGGAAATGTTCAATGGAGA+GGG | 0.592453 | 5_3:+10625598 | Msa0798060:CDS |
| AAATTCGACACAAACAAAGA+TGG | 0.592536 | 5_3:+10631990 | Msa0798060:CDS |
| CATGGAAATGTTCAATGGAG+AGG | 0.594726 | 5_3:+10625597 | Msa0798060:CDS |
| TATTTGATATAAATGGTGAT+GGG | 0.605312 | 5_3:+10625662 | Msa0798060:CDS |
| AGTGAATGCCTTTAAAGCCA+TGG | 0.622176 | 5_3:+10625537 | Msa0798060:CDS |
| GCCATGGACTCTGACAAAGA+TGG | 0.626952 | 5_3:+10625553 | Msa0798060:CDS |
| GCTTGTAAGAAAATGGTGAA+AGG | 0.660596 | 5_3:+10625748 | Msa0798060:CDS |
| TGATGGGAAAATCAGTGCTG+AGG | 0.731787 | 5_3:+10625678 | Msa0798060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGTAGTATTAATTA+AGG | + | chr5_3:10627034-10627053 | Msa0798060:intron | 10.0% |
| !! | TCTTAATATCAATATATAAT+AGG | + | chr5_3:10630913-10630932 | Msa0798060:intron | 10.0% |
| !!! | TTTCAAGTATTTGATATAAA+TGG | + | chr5_3:10625655-10625674 | Msa0798060:CDS | 15.0% |
| !!! | CTTAAATATATCTAGTTTTT+TGG | + | chr5_3:10625915-10625934 | Msa0798060:intron | 15.0% |
| !!! | ATAATCATAACTGATTTAAA+AGG | + | chr5_3:10626172-10626191 | Msa0798060:intron | 15.0% |
| !!! | TATGTTTTATTGATGTTAAT+TGG | + | chr5_3:10626312-10626331 | Msa0798060:intron | 15.0% |
| !! | AAGTTATAATCAATTCTAAA+GGG | - | chr5_3:10626348-10626367 | None:intergenic | 15.0% |
| !! | AATGAAATATATGTAAAGTT+CGG | - | chr5_3:10626777-10626796 | None:intergenic | 15.0% |
| !! | TATTAATTAAGGTTATGTTT+AGG | + | chr5_3:10627045-10627064 | Msa0798060:intron | 15.0% |
| !!! | TTTTAATTTAATTGTGTCAT+AGG | - | chr5_3:10627170-10627189 | None:intergenic | 15.0% |
| !!! | GTTTTTATTTATATACGTAA+AGG | + | chr5_3:10628550-10628569 | Msa0798060:intron | 15.0% |
| !! | TTGAAAATTTCAATAATTTG+AGG | + | chr5_3:10629115-10629134 | Msa0798060:intron | 15.0% |
| !!! | GTGTTTTAATTTTCTAAAAT+AGG | + | chr5_3:10629420-10629439 | Msa0798060:intron | 15.0% |
| !!! | GATAATTATTTTAAATCCAT+GGG | + | chr5_3:10629978-10629997 | Msa0798060:intron | 15.0% |
| !! | TATTATGTTATTCATAACAT+AGG | - | chr5_3:10630226-10630245 | None:intergenic | 15.0% |
| !! | TATGTTATGAATAACATAAT+AGG | + | chr5_3:10630225-10630244 | Msa0798060:intron | 15.0% |
| !!! | TTAAGAATTTTTTAAATTGC+AGG | + | chr5_3:10630490-10630509 | Msa0798060:intron | 15.0% |
| !!! | TTTTAAATTCAACTCAAAAT+TGG | + | chr5_3:10631190-10631209 | Msa0798060:intron | 15.0% |
| !!! | GAAAAATTAGAATAACTTTT+TGG | - | chr5_3:10631506-10631525 | None:intergenic | 15.0% |
| !! | AGCTAATAACTTTAAATTAA+AGG | + | chr5_3:10631546-10631565 | Msa0798060:intron | 15.0% |
| !!! | TTCTTTTGAGCTATATTTTT+TGG | - | chr5_3:10625346-10625365 | None:intergenic | 20.0% |
| !! | AAACAAAGATGAAATGAAAT+GGG | + | chr5_3:10625414-10625433 | Msa0798060:CDS | 20.0% |
| !! | TATTTGATATAAATGGTGAT+GGG | + | chr5_3:10625662-10625681 | Msa0798060:CDS | 20.0% |
| !! | AATTGTCTCAAATATTTAAG+AGG | + | chr5_3:10625701-10625720 | Msa0798060:intron | 20.0% |
| !!! | GAGTGATGAATAAATTTTTT+TGG | + | chr5_3:10625963-10625982 | Msa0798060:intron | 20.0% |
| !!! | AATTTTTTTGGTTAAATGCT+TGG | + | chr5_3:10625975-10625994 | Msa0798060:intron | 20.0% |
| !!! | GCAATTTTTTGTTAATGTTT+AGG | - | chr5_3:10626132-10626151 | None:intergenic | 20.0% |
| !!! | AAAGGTCCTATTTTTTAAAT+TGG | + | chr5_3:10626190-10626209 | Msa0798060:intron | 20.0% |
| !! | CAACAACCAATTTAAAAAAT+AGG | - | chr5_3:10626199-10626218 | None:intergenic | 20.0% |
| !!! | TAAATTGGTTGTTGTTAAAT+TGG | + | chr5_3:10626205-10626224 | Msa0798060:intron | 20.0% |
| !! | CAAGTTATAATCAATTCTAA+AGG | - | chr5_3:10626349-10626368 | None:intergenic | 20.0% |
| !! | CATTCAATAAATTATGTATG+TGG | - | chr5_3:10626630-10626649 | None:intergenic | 20.0% |
| !! | AATGCTTATGTATATGATTT+AGG | + | chr5_3:10627135-10627154 | Msa0798060:intron | 20.0% |
| !! | ATGCTTATGTATATGATTTA+GGG | + | chr5_3:10627136-10627155 | Msa0798060:intron | 20.0% |
| !!! | GATTTTTATTTTCTTGTTGA+CGG | + | chr5_3:10627203-10627222 | Msa0798060:intron | 20.0% |
| !! | GAAAAAAGTCATTTGTAATA+TGG | + | chr5_3:10627665-10627684 | Msa0798060:intron | 20.0% |
| !!! | TTAAGTTTAAAATGAGTTTG+GGG | - | chr5_3:10628204-10628223 | None:intergenic | 20.0% |
| !!! | GTTAAGTTTAAAATGAGTTT+GGG | - | chr5_3:10628205-10628224 | None:intergenic | 20.0% |
| !!! | TGTTAAGTTTAAAATGAGTT+TGG | - | chr5_3:10628206-10628225 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGAGTCTTTATTT+GGG | - | chr5_3:10628377-10628396 | None:intergenic | 20.0% |
| !! | ATCTTCAAAGAACTATTTAT+AGG | - | chr5_3:10629087-10629106 | None:intergenic | 20.0% |
| !! | TGATTAAGTAAAAACATAAC+AGG | - | chr5_3:10629253-10629272 | None:intergenic | 20.0% |
| !! | TTATCACACATATATTATGA+TGG | - | chr5_3:10629600-10629619 | None:intergenic | 20.0% |
| !! | TACAATAACCATATACAAAT+TGG | - | chr5_3:10629792-10629811 | None:intergenic | 20.0% |
| !! | TTCTCTTAAAATTACTTGAA+TGG | + | chr5_3:10629919-10629938 | Msa0798060:intron | 20.0% |
| !!! | CGATAATTATTTTAAATCCA+TGG | + | chr5_3:10629977-10629996 | Msa0798060:intron | 20.0% |
| !!! | AATTTGTCCAGTTTTTTTTA+CGG | - | chr5_3:10630160-10630179 | None:intergenic | 20.0% |
| !! | GATAACAAATTAATGTGTAT+AGG | + | chr5_3:10630273-10630292 | Msa0798060:intron | 20.0% |
| !! | CAATAAAATAAACGAAAGAA+AGG | - | chr5_3:10630599-10630618 | None:intergenic | 20.0% |
| !!! | GTTTATTTTATTGTAAGACT+TGG | + | chr5_3:10630606-10630625 | Msa0798060:intron | 20.0% |
| !! | TATCAATATATAATAGGCTA+TGG | + | chr5_3:10630919-10630938 | Msa0798060:intron | 20.0% |
| !! | ATCAATATATAATAGGCTAT+GGG | + | chr5_3:10630920-10630939 | Msa0798060:intron | 20.0% |
| !!! | AATAGTTTTATTCAATTCAC+CGG | - | chr5_3:10630967-10630986 | None:intergenic | 20.0% |
| !!! | AACTATTTTTTTCCAAAACA+TGG | - | chr5_3:10631119-10631138 | None:intergenic | 20.0% |
| !!! | AATTTGAAATGCATATATGT+TGG | - | chr5_3:10631436-10631455 | None:intergenic | 20.0% |
| !!! | AAATTAGAATAACTTTTTGG+TGG | - | chr5_3:10631503-10631522 | None:intergenic | 20.0% |
| !!! | CTAATTTATAAACACTGATT+TGG | - | chr5_3:10631528-10631547 | None:intergenic | 20.0% |
| !!! | ACTTTTAGTTTAAAAACTCT+TGG | + | chr5_3:10631615-10631634 | Msa0798060:intron | 20.0% |
| !!! | TTAGAACTTTTGATACAATT+AGG | - | chr5_3:10631788-10631807 | None:intergenic | 20.0% |
| !! | AAAGAAAGATGAAATGAAAT+GGG | + | chr5_3:10631959-10631978 | Msa0798060:CDS | 20.0% |
| !!! | TTTTGAGCTATATTTTTTGG+TGG | - | chr5_3:10625343-10625362 | None:intergenic | 25.0% |
| ! | CATTTCATTTCATCTTTGTT+TGG | - | chr5_3:10625415-10625434 | None:intergenic | 25.0% |
| ! | CAAACAAAGATGAAATGAAA+TGG | + | chr5_3:10625413-10625432 | Msa0798060:CDS | 25.0% |
| ! | AAATTTGACACAAACAAAGA+TGG | + | chr5_3:10625445-10625464 | Msa0798060:CDS | 25.0% |
| ! | GTATTTGATATAAATGGTGA+TGG | + | chr5_3:10625661-10625680 | Msa0798060:CDS | 25.0% |
| ! | TCTCAAATATTTAAGAGGTT+AGG | + | chr5_3:10625706-10625725 | Msa0798060:intron | 25.0% |
| ! | TAGATTTGAATGAGTTTACA+AGG | + | chr5_3:10625797-10625816 | Msa0798060:intron | 25.0% |
| !! | ATTTTCATTCTTTGATTGCT+TGG | + | chr5_3:10626000-10626019 | Msa0798060:intron | 25.0% |
| ! | TAGTAGATCAAGTGAAAAAA+AGG | - | chr5_3:10626107-10626126 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAGTTGACTTTTT+AGG | - | chr5_3:10626655-10626674 | None:intergenic | 25.0% |
| !!! | TTGTCATTTTGTATTGCTAA+TGG | - | chr5_3:10626821-10626840 | None:intergenic | 25.0% |
| ! | ATTAGCAATACAAAATGACA+AGG | + | chr5_3:10626820-10626839 | Msa0798060:intron | 25.0% |
| ! | TTCTTAAGATGATTGCTAAT+TGG | + | chr5_3:10626876-10626895 | Msa0798060:intron | 25.0% |
| ! | TTAAAATTTGTCCCTATAGA+AGG | + | chr5_3:10626902-10626921 | Msa0798060:intron | 25.0% |
| ! | TAAAATTTGTCCCTATAGAA+GGG | + | chr5_3:10626903-10626922 | Msa0798060:intron | 25.0% |
| ! | ACATTCAAACAAATGACAAT+TGG | - | chr5_3:10626983-10627002 | None:intergenic | 25.0% |
| ! | TTGTTGACGGAATTAATATA+AGG | + | chr5_3:10627216-10627235 | Msa0798060:intron | 25.0% |
| ! | TGTTGACGGAATTAATATAA+GGG | + | chr5_3:10627217-10627236 | Msa0798060:intron | 25.0% |
| !!! | TTTGATTCATTAATTTGTGC+TGG | - | chr5_3:10627259-10627278 | None:intergenic | 25.0% |
| !!! | TTTGATTCATTAATTTGTGC+TGG | - | chr5_3:10627259-10627278 | None:intergenic | 25.0% |
| ! | AAAAGTCATTTGTAATATGG+TGG | + | chr5_3:10627668-10627687 | Msa0798060:intron | 25.0% |
| ! | ACCTTACTATTAATATGAGT+AGG | + | chr5_3:10627756-10627775 | Msa0798060:intron | 25.0% |
| ! | TCCTACTCATATTAATAGTA+AGG | - | chr5_3:10627760-10627779 | None:intergenic | 25.0% |
| ! | ACTATTAATATGAGTAGGAT+AGG | + | chr5_3:10627761-10627780 | Msa0798060:intron | 25.0% |
| !! | TCTTTATTTGGGTTAAACAA+AGG | - | chr5_3:10628366-10628385 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTGAGTCTTTATT+TGG | - | chr5_3:10628378-10628397 | None:intergenic | 25.0% |
| !! | TTTTCCAGATTGAAGATAAT+CGG | - | chr5_3:10628683-10628702 | None:intergenic | 25.0% |
| !!! | AGAAATGATTACTTTTACCT+TGG | + | chr5_3:10628825-10628844 | Msa0798060:intron | 25.0% |
| ! | TTCAAATGGTTTCTGATATT+TGG | + | chr5_3:10628890-10628909 | Msa0798060:intron | 25.0% |
| ! | TAATGAAGGAATATGGAAAA+AGG | + | chr5_3:10628914-10628933 | Msa0798060:intron | 25.0% |
| ! | AATGAAGGAATATGGAAAAA+GGG | + | chr5_3:10628915-10628934 | Msa0798060:intron | 25.0% |
| ! | AAACTATCAATGTAGATTTC+TGG | - | chr5_3:10629144-10629163 | None:intergenic | 25.0% |
| ! | AGTTGAATTTAATGCACAAA+TGG | - | chr5_3:10629208-10629227 | None:intergenic | 25.0% |
| ! | TAAATGAAACAAACACAAGT+TGG | - | chr5_3:10629318-10629337 | None:intergenic | 25.0% |
| ! | TGTTTCATTTATCTGTTTGT+TGG | + | chr5_3:10629327-10629346 | Msa0798060:intron | 25.0% |
| !! | GTTTTATCTACTGATAAAGA+AGG | - | chr5_3:10629533-10629552 | None:intergenic | 25.0% |
| ! | ACAAATTGGTGTAAACTAAA+TGG | - | chr5_3:10629778-10629797 | None:intergenic | 25.0% |
| ! | AGTTTACACCAATTTGTATA+TGG | + | chr5_3:10629781-10629800 | Msa0798060:intron | 25.0% |
| ! | GAATGGCTATATTTGTAATA+TGG | + | chr5_3:10629936-10629955 | Msa0798060:intron | 25.0% |
| ! | TTTGTAATATGGATTTCTCT+TGG | + | chr5_3:10629947-10629966 | Msa0798060:intron | 25.0% |
| ! | AAAAGTGGGTGTAATTAAAA+TGG | + | chr5_3:10630014-10630033 | Msa0798060:intron | 25.0% |
| !!! | TAAAATGGATTTTACTGTTG+CGG | + | chr5_3:10630029-10630048 | Msa0798060:intron | 25.0% |
| !!! | ATTTGTCCAGTTTTTTTTAC+GGG | - | chr5_3:10630159-10630178 | None:intergenic | 25.0% |
| ! | GTAAAAAAAACTGGACAAAT+TGG | + | chr5_3:10630159-10630178 | Msa0798060:intron | 25.0% |
| ! | AACATAATAGGTTAACATTC+AGG | + | chr5_3:10630237-10630256 | Msa0798060:intron | 25.0% |
| ! | TTTATAAAATTCCTGCTGAT+GGG | + | chr5_3:10630408-10630427 | Msa0798060:intron | 25.0% |
| ! | TCTCAAGAAAGAAAAAAACA+GGG | - | chr5_3:10630463-10630482 | None:intergenic | 25.0% |
| !! | TATTTTATTGTAAGACTTGG+AGG | + | chr5_3:10630609-10630628 | Msa0798060:intron | 25.0% |
| ! | TCAATATATAATAGGCTATG+GGG | + | chr5_3:10630921-10630940 | Msa0798060:intron | 25.0% |
| !!! | ATAGTTTTATTCAATTCACC+GGG | - | chr5_3:10630966-10630985 | None:intergenic | 25.0% |
| !!! | ACTGTCATTTTAAAGATGAA+TGG | + | chr5_3:10630995-10631014 | Msa0798060:intron | 25.0% |
| !!! | AGTATGCACATTTTTAAAAC+TGG | + | chr5_3:10631032-10631051 | Msa0798060:intron | 25.0% |
| !! | AAAACTGGAAATTTTAAACC+TGG | + | chr5_3:10631047-10631066 | Msa0798060:intron | 25.0% |
| !!! | TATAAAATCAGGTTGGTTTT+GGG | - | chr5_3:10631154-10631173 | None:intergenic | 25.0% |
| !!! | TTATAAAATCAGGTTGGTTT+TGG | - | chr5_3:10631155-10631174 | None:intergenic | 25.0% |
| !! | AAAACCAACCTGATTTTATA+AGG | + | chr5_3:10631154-10631173 | Msa0798060:intron | 25.0% |
| !! | AAACCAACCTGATTTTATAA+GGG | + | chr5_3:10631155-10631174 | Msa0798060:intron | 25.0% |
| !!! | AAATTGGTTTGATATTGCTT+TGG | + | chr5_3:10631206-10631225 | Msa0798060:intron | 25.0% |
| ! | ATTTATGTATACCAAAGTGT+TGG | - | chr5_3:10631312-10631331 | None:intergenic | 25.0% |
| ! | ATTAATAGTGACATGAGAAT+AGG | + | chr5_3:10631337-10631356 | Msa0798060:intron | 25.0% |
| !! | GGTTTTACTAAAAGTTCAAA+AGG | + | chr5_3:10631404-10631423 | Msa0798060:intron | 25.0% |
| !! | ACTCTAAGAATCTAGTATAA+AGG | + | chr5_3:10631586-10631605 | Msa0798060:intron | 25.0% |
| ! | GGCTTATGAAATCTATATAA+AGG | + | chr5_3:10631714-10631733 | Msa0798060:intron | 25.0% |
| !!! | TTTTGAGCTATATTTTTTCG+TGG | - | chr5_3:10631888-10631907 | None:intergenic | 25.0% |
| ! | CATTTCATTTCATCTTTCTT+TGG | - | chr5_3:10631960-10631979 | None:intergenic | 25.0% |
| ! | CAAAGAAAGATGAAATGAAA+TGG | + | chr5_3:10631958-10631977 | Msa0798060:CDS | 25.0% |
| ATGAGTTTCCTAAAGTTTCA+TGG | + | chr5_3:10625292-10625311 | Msa0798060:CDS | 30.0% | |
| AAAAGCTACCATGAAACTTT+AGG | - | chr5_3:10625303-10625322 | None:intergenic | 30.0% | |
| ! | TCATTTCATCTTTGTTTGGT+TGG | - | chr5_3:10625411-10625430 | None:intergenic | 30.0% |
| ! | CATAGACTTTAAAGAGTTCA+TGG | + | chr5_3:10625579-10625598 | Msa0798060:CDS | 30.0% |
| ! | TTTACAAGGATGATGATGAA+TGG | + | chr5_3:10625811-10625830 | Msa0798060:intron | 30.0% |
| TCGGAGTAATATAATCACTT+AGG | - | chr5_3:10625848-10625867 | None:intergenic | 30.0% | |
| ATTATATTACTCCGAGATAG+AGG | + | chr5_3:10625853-10625872 | Msa0798060:intron | 30.0% | |
| TTTAACTGAATAAGCGTGTT+TGG | + | chr5_3:10626240-10626259 | Msa0798060:intron | 30.0% | |
| !! | CATGTGTTTGAAATCACTTT+TGG | - | chr5_3:10626279-10626298 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+CGG | - | chr5_3:10626665-10626684 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+CGG | + | chr5_3:10626665-10626684 | Msa0798060:intron | 30.0% |
| GAAATATATGTAAAGTTCGG+TGG | - | chr5_3:10626774-10626793 | None:intergenic | 30.0% | |
| AATAGAATGCTGAAAACTTG+AGG | + | chr5_3:10627335-10627354 | Msa0798060:intron | 30.0% | |
| ATAGAATGCTGAAAACTTGA+GGG | + | chr5_3:10627336-10627355 | Msa0798060:intron | 30.0% | |
| AATAGAATGCTGAAAACTTG+AGG | + | chr5_3:10627335-10627354 | Msa0798060:intron | 30.0% | |
| ATAGAATGCTGAAAACTTGA+GGG | + | chr5_3:10627336-10627355 | Msa0798060:intron | 30.0% | |
| ! | GGATATAGAATTGGTGATAT+TGG | + | chr5_3:10627611-10627630 | Msa0798060:intron | 30.0% |
| TAGATAACACTTGAATGACA+TGG | - | chr5_3:10627727-10627746 | None:intergenic | 30.0% | |
| ATTTCTGTTATCAGCTCAAA+TGG | - | chr5_3:10628061-10628080 | None:intergenic | 30.0% | |
| TGATAACAGAAATTCTATGC+AGG | + | chr5_3:10628068-10628087 | Msa0798060:intron | 30.0% | |
| ATAAACTACGTGAGAGAAAT+CGG | - | chr5_3:10628236-10628255 | None:intergenic | 30.0% | |
| TATCATTGGTGAAGAAAGAA+CGG | - | chr5_3:10628264-10628283 | None:intergenic | 30.0% | |
| TCTTTCTTCACCAATGATAA+TGG | + | chr5_3:10628265-10628284 | Msa0798060:intron | 30.0% | |
| CTTTCTTCACCAATGATAAT+GGG | + | chr5_3:10628266-10628285 | Msa0798060:intron | 30.0% | |
| ! | TAGTAAGTTGCATTTTCTAG+TGG | - | chr5_3:10628425-10628444 | None:intergenic | 30.0% |
| TATATACCACAGCAAAATCA+TGG | + | chr5_3:10628454-10628473 | Msa0798060:intron | 30.0% | |
| TGTTTACAAAACTCAAGCTA+TGG | + | chr5_3:10628594-10628613 | Msa0798060:intron | 30.0% | |
| ! | GACTTTCCTTCTCTAATTTT+TGG | + | chr5_3:10628655-10628674 | Msa0798060:intron | 30.0% |
| CAATCTGGAAAATTTGTAAG+TGG | + | chr5_3:10628691-10628710 | Msa0798060:intron | 30.0% | |
| !! | AACAAAGTATTGGAATCAGA+TGG | - | chr5_3:10628739-10628758 | None:intergenic | 30.0% |
| !! | AATAATGGGCAACAAAGTAT+TGG | - | chr5_3:10628749-10628768 | None:intergenic | 30.0% |
| CCCAAATCAAGAGAAATAAT+GGG | - | chr5_3:10628763-10628782 | None:intergenic | 30.0% | |
| ! | CCCATTATTTCTCTTGATTT+GGG | + | chr5_3:10628760-10628779 | Msa0798060:intron | 30.0% |
| ! | CCATTATTTCTCTTGATTTG+GGG | + | chr5_3:10628761-10628780 | Msa0798060:intron | 30.0% |
| ! | AGATTTTGCATCCTGATTAT+GGG | + | chr5_3:10628800-10628819 | Msa0798060:intron | 30.0% |
| !! | AATGATTACTTTTACCTTGG+TGG | + | chr5_3:10628828-10628847 | Msa0798060:intron | 30.0% |
| !! | TTTGAATTTCACTTTTCGCA+AGG | - | chr5_3:10628876-10628895 | None:intergenic | 30.0% |
| TGCGAAAAGTGAAATTCAAA+TGG | + | chr5_3:10628876-10628895 | Msa0798060:intron | 30.0% | |
| TTCTGATATTTGGCTAATGA+AGG | + | chr5_3:10628900-10628919 | Msa0798060:intron | 30.0% | |
| ATTTGGCTAATGAAGGAATA+TGG | + | chr5_3:10628907-10628926 | Msa0798060:intron | 30.0% | |
| ATTAATGCAGGGGTAATAAT+CGG | - | chr5_3:10628983-10629002 | None:intergenic | 30.0% | |
| ! | TAAAGTGCTTGATTAATGCA+GGG | - | chr5_3:10628994-10629013 | None:intergenic | 30.0% |
| ! | ATAAAGTGCTTGATTAATGC+AGG | - | chr5_3:10628995-10629014 | None:intergenic | 30.0% |
| ! | TCAAGCACTTTATATTTCTG+AGG | + | chr5_3:10629002-10629021 | Msa0798060:intron | 30.0% |
| CATACCTAACATTAAGAACA+AGG | - | chr5_3:10629174-10629193 | None:intergenic | 30.0% | |
| ! | TATCTGTTTGTTGGAGTTAT+TGG | + | chr5_3:10629336-10629355 | Msa0798060:intron | 30.0% |
| TAAAATGTAATGCACAACGA+AGG | - | chr5_3:10629364-10629383 | None:intergenic | 30.0% | |
| GCATATAAGTTAGCAAACAT+GGG | - | chr5_3:10629466-10629485 | None:intergenic | 30.0% | |
| AGCATATAAGTTAGCAAACA+TGG | - | chr5_3:10629467-10629486 | None:intergenic | 30.0% | |
| AGATGAGGAAATGAAAATGA+GGG | - | chr5_3:10629648-10629667 | None:intergenic | 30.0% | |
| TAATAATGCAAAAGCAGATG+AGG | - | chr5_3:10629663-10629682 | None:intergenic | 30.0% | |
| AACTAAATGGTGAACAAACT+TGG | - | chr5_3:10629765-10629784 | None:intergenic | 30.0% | |
| !! | AAAATGGATTTTACTGTTGC+GGG | + | chr5_3:10630030-10630049 | Msa0798060:intron | 30.0% |
| AGATATTGTTCTAGCAAAAC+AGG | + | chr5_3:10630085-10630104 | Msa0798060:intron | 30.0% | |
| GATATTGTTCTAGCAAAACA+GGG | + | chr5_3:10630086-10630105 | Msa0798060:intron | 30.0% | |
| GGTAGTTGAATGTTAGAATT+TGG | + | chr5_3:10630180-10630199 | Msa0798060:intron | 30.0% | |
| ACTAAAACCTGAACTATCAA+TGG | + | chr5_3:10630320-10630339 | Msa0798060:intron | 30.0% | |
| GTTTATAAAATTCCTGCTGA+TGG | + | chr5_3:10630407-10630426 | Msa0798060:intron | 30.0% | |
| CTCTCAAGAAAGAAAAAAAC+AGG | - | chr5_3:10630464-10630483 | None:intergenic | 30.0% | |
| ! | TTTTAAATTGCAGGTTGTGA+AGG | + | chr5_3:10630499-10630518 | Msa0798060:intron | 30.0% |
| AACAGGACATAAAGCAAAAT+AGG | - | chr5_3:10630648-10630667 | None:intergenic | 30.0% | |
| AACAGATTTAGCATTCAAAC+AGG | - | chr5_3:10630665-10630684 | None:intergenic | 30.0% | |
| ATATTAAGACTGTAGCATAG+CGG | - | chr5_3:10630902-10630921 | None:intergenic | 30.0% | |
| !! | ATCTTTAAAATGACAGTCAC+TGG | - | chr5_3:10630992-10631011 | None:intergenic | 30.0% |
| ! | CTACTAATTTGTACAAAACC+AGG | - | chr5_3:10631068-10631087 | None:intergenic | 30.0% |
| ! | AACCAACCTGATTTTATAAG+GGG | + | chr5_3:10631156-10631175 | Msa0798060:intron | 30.0% |
| CATTATTTGTGTTGGATACA+CGG | + | chr5_3:10631383-10631402 | Msa0798060:intron | 30.0% | |
| !! | AGAATAACTTTTTGGTGGAA+TGG | - | chr5_3:10631498-10631517 | None:intergenic | 30.0% |
| ATACTAGATTCTTAGAGTTG+TGG | - | chr5_3:10631584-10631603 | None:intergenic | 30.0% | |
| TCAAGAACCTTACTAAGAAT+AGG | + | chr5_3:10631690-10631709 | Msa0798060:intron | 30.0% | |
| ! | ATTAGGCTTTAGTATGGTTA+TGG | - | chr5_3:10631771-10631790 | None:intergenic | 30.0% |
| ! | GATACAATTAGGCTTTAGTA+TGG | - | chr5_3:10631777-10631796 | None:intergenic | 30.0% |
| !! | TAGGAAACTCAATTTTGACA+TGG | - | chr5_3:10631829-10631848 | None:intergenic | 30.0% |
| TTGAGTTTCCTAAAGTTTCA+TGG | + | chr5_3:10631837-10631856 | Msa0798060:intron | 30.0% | |
| !!! | ATATTTTTTCGTGGAGATGT+TGG | - | chr5_3:10631879-10631898 | None:intergenic | 30.0% |
| TCATTTCATCTTTCTTTGGT+TGG | - | chr5_3:10631956-10631975 | None:intergenic | 30.0% | |
| AAATTCGACACAAACAAAGA+TGG | + | chr5_3:10631990-10632009 | Msa0798060:CDS | 30.0% | |
| !!! | ATATTTTTTGGTGGAGAGGT+TGG | - | chr5_3:10625334-10625353 | None:intergenic | 35.0% |
| !!! | AGCTATATTTTTTGGTGGAG+AGG | - | chr5_3:10625338-10625357 | None:intergenic | 35.0% |
| GTTTGGTTGGAAACTCATTT+CGG | - | chr5_3:10625398-10625417 | None:intergenic | 35.0% | |
| GAGTTCATGGAAATGTTCAA+TGG | + | chr5_3:10625592-10625611 | Msa0798060:CDS | 35.0% | |
| ATGGAAATGTTCAATGGAGA+GGG | + | chr5_3:10625598-10625617 | Msa0798060:CDS | 35.0% | |
| GGGTAGTAAGATAAAAGAAG+AGG | + | chr5_3:10625618-10625637 | Msa0798060:CDS | 35.0% | |
| ! | CCATTTTCTTACAAGCACTA+AGG | - | chr5_3:10625744-10625763 | None:intergenic | 35.0% |
| CCTTAGTGCTTGTAAGAAAA+TGG | + | chr5_3:10625741-10625760 | Msa0798060:CDS | 35.0% | |
| GCTTGTAAGAAAATGGTGAA+AGG | + | chr5_3:10625748-10625767 | Msa0798060:CDS | 35.0% | |
| !! | AAAATGGTGAAAGGTGTTGA+TGG | + | chr5_3:10625757-10625776 | Msa0798060:CDS | 35.0% |
| CAGATTATTCTCCTCTATCT+CGG | - | chr5_3:10625867-10625886 | None:intergenic | 35.0% | |
| AAGTTTATGAATACTCCCTC+CGG | - | chr5_3:10626687-10626706 | None:intergenic | 35.0% | |
| CACATTAATTGCACTCAAGT+TGG | - | chr5_3:10626936-10626955 | None:intergenic | 35.0% | |
| CTTAAGTGCACAAGTTAGTA+GGG | + | chr5_3:10627390-10627409 | Msa0798060:intron | 35.0% | |
| AAGTTAGTAGGGTAACACTT+GGG | + | chr5_3:10627401-10627420 | Msa0798060:intron | 35.0% | |
| CTTAAGTGCACAAGTTAGTA+GGG | + | chr5_3:10627390-10627409 | Msa0798060:intron | 35.0% | |
| AAGTTAGTAGGGTAACACTT+GGG | + | chr5_3:10627401-10627420 | Msa0798060:intron | 35.0% | |
| TATGGTGGTTGATCAATATC+AGG | + | chr5_3:10627683-10627702 | Msa0798060:intron | 35.0% | |
| ! | TGTCAAGAGTACAACAAAAG+AGG | - | chr5_3:10627798-10627817 | None:intergenic | 35.0% |
| !! | CTTTTGTTGTACTCTTGACA+AGG | + | chr5_3:10627798-10627817 | Msa0798060:intron | 35.0% |
| TAAACTACGTGAGAGAAATC+GGG | - | chr5_3:10628235-10628254 | None:intergenic | 35.0% | |
| !! | AATGATAATGGGACTATCGA+GGG | + | chr5_3:10628277-10628296 | Msa0798060:intron | 35.0% |
| TACAAGTCTACTAGCATAGT+TGG | + | chr5_3:10628325-10628344 | Msa0798060:intron | 35.0% | |
| !! | AGTTGCATTTTCTAGTGGAA+GGG | - | chr5_3:10628420-10628439 | None:intergenic | 35.0% |
| !! | AAGTTGCATTTTCTAGTGGA+AGG | - | chr5_3:10628421-10628440 | None:intergenic | 35.0% |
| ! | TTCATACCATGATTTTGCTG+TGG | - | chr5_3:10628463-10628482 | None:intergenic | 35.0% |
| CAGCAAAATCATGGTATGAA+CGG | + | chr5_3:10628463-10628482 | Msa0798060:intron | 35.0% | |
| !! | GGATTTGTTGAGACAGTATA+TGG | + | chr5_3:10628484-10628503 | Msa0798060:intron | 35.0% |
| TCAAGCTATGGTTCATACTT+TGG | + | chr5_3:10628606-10628625 | Msa0798060:intron | 35.0% | |
| CAAGCTATGGTTCATACTTT+GGG | + | chr5_3:10628607-10628626 | Msa0798060:intron | 35.0% | |
| !! | ATACTTTGGGTACTGATTCT+TGG | + | chr5_3:10628620-10628639 | Msa0798060:intron | 35.0% |
| TGATTCTTGGAGATTCATAC+AGG | + | chr5_3:10628633-10628652 | Msa0798060:intron | 35.0% | |
| TCGGAACCAAAAATTAGAGA+AGG | - | chr5_3:10628664-10628683 | None:intergenic | 35.0% | |
| TTGTAAGTGGCACACTTAAT+TGG | + | chr5_3:10628704-10628723 | Msa0798060:intron | 35.0% | |
| ! | GCCCATTATTTCTCTTGATT+TGG | + | chr5_3:10628759-10628778 | Msa0798060:intron | 35.0% |
| CCCCAAATCAAGAGAAATAA+TGG | - | chr5_3:10628764-10628783 | None:intergenic | 35.0% | |
| AGGATGCAAAATCTCTTGAT+AGG | - | chr5_3:10628794-10628813 | None:intergenic | 35.0% | |
| ! | GAGATTTTGCATCCTGATTA+TGG | + | chr5_3:10628799-10628818 | Msa0798060:intron | 35.0% |
| ! | GATTTTGCATCCTGATTATG+GGG | + | chr5_3:10628801-10628820 | Msa0798060:intron | 35.0% |
| !!! | TTTTACCTTGGTGGTTTTGA+GGG | + | chr5_3:10628837-10628856 | Msa0798060:intron | 35.0% |
| AATATGGAAAAAGGGAGTCT+TGG | + | chr5_3:10628923-10628942 | Msa0798060:intron | 35.0% | |
| TAATCGGTGAATTCCATGTA+AGG | - | chr5_3:10628967-10628986 | None:intergenic | 35.0% | |
| ! | AAAGTGCTTGATTAATGCAG+GGG | - | chr5_3:10628993-10629012 | None:intergenic | 35.0% |
| GTTTATGAATGCGTTGCAAT+TGG | + | chr5_3:10629044-10629063 | Msa0798060:intron | 35.0% | |
| ! | ATCGCCTTGTTCTTAATGTT+AGG | + | chr5_3:10629167-10629186 | Msa0798060:intron | 35.0% |
| TCAGTAGATAAAACCTCAGA+AGG | + | chr5_3:10629539-10629558 | Msa0798060:intron | 35.0% | |
| CAGTAGATAAAACCTCAGAA+GGG | + | chr5_3:10629540-10629559 | Msa0798060:intron | 35.0% | |
| CAGATGAGGAAATGAAAATG+AGG | - | chr5_3:10629649-10629668 | None:intergenic | 35.0% | |
| TCATCATTCTTTGTGCAGTT+TGG | + | chr5_3:10629852-10629871 | Msa0798060:intron | 35.0% | |
| GATTCTAACAACTGAGATCT+TGG | + | chr5_3:10629878-10629897 | Msa0798060:intron | 35.0% | |
| GTGCATGAGAAATCAAAAGT+GGG | + | chr5_3:10630000-10630019 | Msa0798060:intron | 35.0% | |
| TGTTAGAATTTGGCTGTATG+AGG | + | chr5_3:10630190-10630209 | Msa0798060:intron | 35.0% | |
| GTTAGAATTTGGCTGTATGA+GGG | + | chr5_3:10630191-10630210 | Msa0798060:intron | 35.0% | |
| TTAGAATTTGGCTGTATGAG+GGG | + | chr5_3:10630192-10630211 | Msa0798060:intron | 35.0% | |
| CAATATTGTACAACGACGAA+AGG | - | chr5_3:10630374-10630393 | None:intergenic | 35.0% | |
| TTGCCAAAAGATGCATCAAA+GGG | - | chr5_3:10630527-10630546 | None:intergenic | 35.0% | |
| ATTGCCAAAAGATGCATCAA+AGG | - | chr5_3:10630528-10630547 | None:intergenic | 35.0% | |
| AATAGGCTATGGGGTTAAAT+TGG | + | chr5_3:10630930-10630949 | Msa0798060:intron | 35.0% | |
| ! | ACTAAGTTCACACCATGTTT+TGG | + | chr5_3:10631104-10631123 | Msa0798060:intron | 35.0% |
| !! | TTTTATAAGGGGCTTGGTTA+TGG | + | chr5_3:10631167-10631186 | Msa0798060:intron | 35.0% |
| ! | GAGTACAGAACATTTTGTGA+AGG | - | chr5_3:10631276-10631295 | None:intergenic | 35.0% |
| AAATGTTCTGTACTCGTTGA+AGG | + | chr5_3:10631281-10631300 | Msa0798060:intron | 35.0% | |
| AAGTGGGACATTATTTGTGT+TGG | + | chr5_3:10631375-10631394 | Msa0798060:intron | 35.0% | |
| AGAACCTTACTAAGAATAGG+AGG | + | chr5_3:10631693-10631712 | Msa0798060:intron | 35.0% | |
| TAAGCCTCCTATTCTTAGTA+AGG | - | chr5_3:10631700-10631719 | None:intergenic | 35.0% | |
| AAAAGCTGCCATGAAACTTT+AGG | - | chr5_3:10631848-10631867 | None:intergenic | 35.0% | |
| CTTTGGTTGGAAACTCATTT+CGG | - | chr5_3:10631943-10631962 | None:intergenic | 35.0% | |
| !! | AAAGATGGCAAGATTAGTCT+GGG | + | chr5_3:10625460-10625479 | Msa0798060:intron | 35.0% |
| TAAAGCAGCTGCAAAAGCTT+TGG | + | chr5_3:10625489-10625508 | Msa0798060:CDS | 40.0% | |
| !! | AGCTGCAAAAGCTTTGGATA+AGG | + | chr5_3:10625495-10625514 | Msa0798060:CDS | 40.0% |
| !! | GCTGCAAAAGCTTTGGATAA+GGG | + | chr5_3:10625496-10625515 | Msa0798060:CDS | 40.0% |
| !! | CTGCAAAAGCTTTGGATAAG+GGG | + | chr5_3:10625497-10625516 | Msa0798060:CDS | 40.0% |
| !! | AAAGCTTTGGATAAGGGGAT+TGG | + | chr5_3:10625502-10625521 | Msa0798060:CDS | 40.0% |
| !! | AAGCTTTGGATAAGGGGATT+GGG | + | chr5_3:10625503-10625522 | Msa0798060:CDS | 40.0% |
| !! | AGTGAATGCCTTTAAAGCCA+TGG | + | chr5_3:10625537-10625556 | Msa0798060:CDS | 40.0% |
| CATGGAAATGTTCAATGGAG+AGG | + | chr5_3:10625597-10625616 | Msa0798060:CDS | 40.0% | |
| CGAGATAGAGGAGAATAATC+TGG | + | chr5_3:10625865-10625884 | Msa0798060:intron | 40.0% | |
| AGCGTGTTTGGTTATTCGAT+AGG | + | chr5_3:10626252-10626271 | Msa0798060:intron | 40.0% | |
| GCGTGTTTGGTTATTCGATA+GGG | + | chr5_3:10626253-10626272 | Msa0798060:intron | 40.0% | |
| CACTTAAGATATACTCCCTC+CGG | + | chr5_3:10626535-10626554 | Msa0798060:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr5_3:10626669-10626688 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr5_3:10626668-10626687 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr5_3:10626668-10626687 | Msa0798060:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr5_3:10626669-10626688 | Msa0798060:intron | 40.0% | |
| TTCGGTGGAGATAAGCAATT+GGG | - | chr5_3:10626759-10626778 | None:intergenic | 40.0% | |
| TTTGTCCCTATAGAAGGGTA+AGG | + | chr5_3:10626908-10626927 | Msa0798060:intron | 40.0% | |
| ! | CCTACTAACTTGTGCACTTA+AGG | - | chr5_3:10627392-10627411 | None:intergenic | 40.0% |
| CCTTAAGTGCACAAGTTAGT+AGG | + | chr5_3:10627389-10627408 | Msa0798060:intron | 40.0% | |
| CAAGTTAGTAGGGTAACACT+TGG | + | chr5_3:10627400-10627419 | Msa0798060:intron | 40.0% | |
| AGTTAGTAGGGTAACACTTG+GGG | + | chr5_3:10627402-10627421 | Msa0798060:intron | 40.0% | |
| ACACTTGGGGGATATAGAAT+TGG | + | chr5_3:10627415-10627434 | Msa0798060:intron | 40.0% | |
| ! | CCTACTAACTTGTGCACTTA+AGG | - | chr5_3:10627392-10627411 | None:intergenic | 40.0% |
| CCTTAAGTGCACAAGTTAGT+AGG | + | chr5_3:10627389-10627408 | Msa0798060:intron | 40.0% | |
| CAAGTTAGTAGGGTAACACT+TGG | + | chr5_3:10627400-10627419 | Msa0798060:intron | 40.0% | |
| AGTTAGTAGGGTAACACTTG+GGG | + | chr5_3:10627402-10627421 | Msa0798060:intron | 40.0% | |
| ACACTTGGGGGATATAGAAT+TGG | + | chr5_3:10627415-10627434 | Msa0798060:intron | 40.0% | |
| ! | TGGTGACATTTGAAGAGTGT+TGG | - | chr5_3:10628023-10628042 | None:intergenic | 40.0% |
| ATCAGCTCAAATGGAAGAGT+GGG | - | chr5_3:10628052-10628071 | None:intergenic | 40.0% | |
| TATCAGCTCAAATGGAAGAG+TGG | - | chr5_3:10628053-10628072 | None:intergenic | 40.0% | |
| TCAAATGTGTCTGCAAACCA+TGG | + | chr5_3:10628116-10628135 | Msa0798060:intron | 40.0% | |
| GAGGAAATTAGGGAATTCCA+TGG | - | chr5_3:10628136-10628155 | None:intergenic | 40.0% | |
| !! | TTTTCTGGCAAACTTGCGAT+CGG | - | chr5_3:10628158-10628177 | None:intergenic | 40.0% |
| AAGTTTGCCAGAAAACACCT+TGG | + | chr5_3:10628163-10628182 | Msa0798060:intron | 40.0% | |
| !! | TGAAATGCCAAGGTGTTTTC+TGG | - | chr5_3:10628173-10628192 | None:intergenic | 40.0% |
| GGTTCATTCTTGAAATGCCA+AGG | - | chr5_3:10628183-10628202 | None:intergenic | 40.0% | |
| CTCGATAGTCCCATTATCAT+TGG | - | chr5_3:10628278-10628297 | None:intergenic | 40.0% | |
| !! | CAATGATAATGGGACTATCG+AGG | + | chr5_3:10628276-10628295 | Msa0798060:intron | 40.0% |
| ATGCTAGTAGACTTGTAGAG+AGG | - | chr5_3:10628322-10628341 | None:intergenic | 40.0% | |
| TGCTGTGGTATATAGCAAGT+GGG | - | chr5_3:10628448-10628467 | None:intergenic | 40.0% | |
| TTGCTGTGGTATATAGCAAG+TGG | - | chr5_3:10628449-10628468 | None:intergenic | 40.0% | |
| GTTGAGACAGTATATGGCTT+TGG | + | chr5_3:10628490-10628509 | Msa0798060:intron | 40.0% | |
| GGTTCCGATTATCTTCAATC+TGG | + | chr5_3:10628676-10628695 | Msa0798060:intron | 40.0% | |
| AAGTGGCACACTTAATTGGT+TGG | + | chr5_3:10628708-10628727 | Msa0798060:intron | 40.0% | |
| ATCATTTCTGCCCCATAATC+AGG | - | chr5_3:10628814-10628833 | None:intergenic | 40.0% | |
| !! | CTTTTACCTTGGTGGTTTTG+AGG | + | chr5_3:10628836-10628855 | Msa0798060:intron | 40.0% |
| AAGGGAGTCTTGGACTAAAT+TGG | + | chr5_3:10628933-10628952 | Msa0798060:intron | 40.0% | |
| ATTGGTCAGTGTTCCTTACA+TGG | + | chr5_3:10628951-10628970 | Msa0798060:intron | 40.0% | |
| ! | CACAAGTTGGACATATCGAT+CGG | - | chr5_3:10629305-10629324 | None:intergenic | 40.0% |
| CACATCAAGATTTGTGCAAC+AGG | - | chr5_3:10629491-10629510 | None:intergenic | 40.0% | |
| CTGTTGCACAAATCTTGATG+TGG | + | chr5_3:10629489-10629508 | Msa0798060:intron | 40.0% | |
| TCTGAAAAATCTCCCTTCTG+AGG | - | chr5_3:10629555-10629574 | None:intergenic | 40.0% | |
| GTGACCTCTATATCTCGATT+CGG | + | chr5_3:10629705-10629724 | Msa0798060:intron | 40.0% | |
| AGATCCGAATCGAGATATAG+AGG | - | chr5_3:10629712-10629731 | None:intergenic | 40.0% | |
| ACTGCACAAAGAATGATGAG+TGG | - | chr5_3:10629851-10629870 | None:intergenic | 40.0% | |
| TCATTCTTTGTGCAGTTTGG+AGG | + | chr5_3:10629855-10629874 | Msa0798060:intron | 40.0% | |
| CATTCTTTGTGCAGTTTGGA+GGG | + | chr5_3:10629856-10629875 | Msa0798060:intron | 40.0% | |
| ! | TTTGATTTCTCATGCACCCA+TGG | - | chr5_3:10629997-10630016 | None:intergenic | 40.0% |
| GGTGCATGAGAAATCAAAAG+TGG | + | chr5_3:10629999-10630018 | Msa0798060:intron | 40.0% | |
| ! | ATTTTACTGTTGCGGGATCA+GGG | + | chr5_3:10630037-10630056 | Msa0798060:intron | 40.0% |
| !!! | TGTCCAGTTTTTTTTACGGG+AGG | - | chr5_3:10630156-10630175 | None:intergenic | 40.0% |
| AAAAGATGAATCCCATCAGC+AGG | - | chr5_3:10630422-10630441 | None:intergenic | 40.0% | |
| ATTATTGTGCCCGTAGACAT+TGG | + | chr5_3:10630556-10630575 | Msa0798060:intron | 40.0% | |
| TGAGCATTCTCCAATGTCTA+CGG | - | chr5_3:10630569-10630588 | None:intergenic | 40.0% | |
| AAAACGCTATAACGGTGTAG+CGG | - | chr5_3:10630871-10630890 | None:intergenic | 40.0% | |
| ! | CTACACCGTTATAGCGTTTT+GGG | + | chr5_3:10630871-10630890 | Msa0798060:intron | 40.0% |
| ! | TACACCGTTATAGCGTTTTG+GGG | + | chr5_3:10630872-10630891 | Msa0798060:intron | 40.0% |
| TAAATTGGAACAGCATGACC+CGG | + | chr5_3:10630945-10630964 | Msa0798060:intron | 40.0% | |
| CATGGTGTGAACTTAGTAAC+TGG | - | chr5_3:10631101-10631120 | None:intergenic | 40.0% | |
| AGCCCCTTATAAAATCAGGT+TGG | - | chr5_3:10631161-10631180 | None:intergenic | 40.0% | |
| ! | ACCTGATTTTATAAGGGGCT+TGG | + | chr5_3:10631161-10631180 | Msa0798060:intron | 40.0% |
| ACCAAGCCCCTTATAAAATC+AGG | - | chr5_3:10631165-10631184 | None:intergenic | 40.0% | |
| CAAGGTTCACTTATGACTCA+CGG | - | chr5_3:10631468-10631487 | None:intergenic | 40.0% | |
| ! | CAAAGATGGCAAGATTAGTC+TGG | + | chr5_3:10625459-10625478 | Msa0798060:intron | 40.0% |
| !! | TTTTGGTGGAGAGGTTGGTT+TGG | - | chr5_3:10625329-10625348 | None:intergenic | 45.0% |
| !! | AGCTTTGGATAAGGGGATTG+GGG | + | chr5_3:10625504-10625523 | Msa0798060:CDS | 45.0% |
| !! | GTCAGAGTCCATGGCTTTAA+AGG | - | chr5_3:10625548-10625567 | None:intergenic | 45.0% |
| TGATGGGAAAATCAGTGCTG+AGG | + | chr5_3:10625678-10625697 | Msa0798060:CDS | 45.0% | |
| !! | GTGAAAGGTGTTGATGGTGA+TGG | + | chr5_3:10625763-10625782 | Msa0798060:CDS | 45.0% |
| TCGGTGGAGATAAGCAATTG+GGG | - | chr5_3:10626758-10626777 | None:intergenic | 45.0% | |
| ! | GTTCGGTGGAGATAAGCAAT+TGG | - | chr5_3:10626760-10626779 | None:intergenic | 45.0% |
| TGGCTCCTTACCCTTCTATA+GGG | - | chr5_3:10626916-10626935 | None:intergenic | 45.0% | |
| TTGGCTCCTTACCCTTCTAT+AGG | - | chr5_3:10626917-10626936 | None:intergenic | 45.0% | |
| GTTAGTAGGGTAACACTTGG+GGG | + | chr5_3:10627403-10627422 | Msa0798060:intron | 45.0% | |
| GTTAGTAGGGTAACACTTGG+GGG | + | chr5_3:10627403-10627422 | Msa0798060:intron | 45.0% | |
| TGGTGGTAAAGTTAGGGTTC+CGG | - | chr5_3:10627981-10628000 | None:intergenic | 45.0% | |
| TTGGAAGATGAAGAGAGCGA+CGG | - | chr5_3:10628004-10628023 | None:intergenic | 45.0% | |
| TCAAATGGAAGAGTGGGTAG+CGG | - | chr5_3:10628046-10628065 | None:intergenic | 45.0% | |
| GATTCCCGTCAATTTCCTGA+TGG | + | chr5_3:10628090-10628109 | Msa0798060:intron | 45.0% | |
| AGTGCCATCAGGAAATTGAC+GGG | - | chr5_3:10628097-10628116 | None:intergenic | 45.0% | |
| GAGTGCCATCAGGAAATTGA+CGG | - | chr5_3:10628098-10628117 | None:intergenic | 45.0% | |
| AGACACATTTGAGTGCCATC+AGG | - | chr5_3:10628108-10628127 | None:intergenic | 45.0% | |
| CTTGCGATCGGAGGAAATTA+GGG | - | chr5_3:10628146-10628165 | None:intergenic | 45.0% | |
| ACTTGCGATCGGAGGAAATT+AGG | - | chr5_3:10628147-10628166 | None:intergenic | 45.0% | |
| TTGGTGAAGAAAGAACGGAG+AGG | - | chr5_3:10628259-10628278 | None:intergenic | 45.0% | |
| ! | AGCATAGTTGGTTCTTGCGA+CGG | + | chr5_3:10628337-10628356 | Msa0798060:intron | 45.0% |
| ACTTTGTTCAACCTGCCTTG+TGG | + | chr5_3:10628392-10628411 | Msa0798060:intron | 45.0% | |
| GAATGCGTTGCAATTGGAGT+TGG | + | chr5_3:10629050-10629069 | Msa0798060:intron | 45.0% | |
| GGAAATGAAAATGAGGGCGA+AGG | - | chr5_3:10629642-10629661 | None:intergenic | 45.0% | |
| TATAGAGGTCACAGCAGATG+AGG | - | chr5_3:10629697-10629716 | None:intergenic | 45.0% | |
| ! | GATTTTACTGTTGCGGGATC+AGG | + | chr5_3:10630036-10630055 | Msa0798060:intron | 45.0% |
| TTTGCACAACTCACATGAGC+AGG | + | chr5_3:10630130-10630149 | Msa0798060:intron | 45.0% | |
| AGGCCTCCCGTAAAAAAAAC+TGG | + | chr5_3:10630150-10630169 | Msa0798060:intron | 45.0% | |
| ACTATCAATGGCGTGCGAAT+AGG | + | chr5_3:10630332-10630351 | Msa0798060:intron | 45.0% | |
| CTATCAATGGCGTGCGAATA+GGG | + | chr5_3:10630333-10630352 | Msa0798060:intron | 45.0% | |
| TATCAATGGCGTGCGAATAG+GGG | + | chr5_3:10630334-10630353 | Msa0798060:intron | 45.0% | |
| ! | GAGCCCTTTGATGCATCTTT+TGG | + | chr5_3:10630521-10630540 | Msa0798060:intron | 45.0% |
| ! | GCATCTTTTGGCAATACTGC+AGG | + | chr5_3:10630533-10630552 | Msa0798060:intron | 45.0% |
| GAGCATTCTCCAATGTCTAC+GGG | - | chr5_3:10630568-10630587 | None:intergenic | 45.0% | |
| AAACGCTATAACGGTGTAGC+GGG | - | chr5_3:10630870-10630889 | None:intergenic | 45.0% | |
| ! | GCTACACCGTTATAGCGTTT+TGG | + | chr5_3:10630870-10630889 | Msa0798060:intron | 45.0% |
| CCATCCCCAAAACGCTATAA+CGG | - | chr5_3:10630879-10630898 | None:intergenic | 45.0% | |
| TGAAGGATTCGCCAACACTT+TGG | + | chr5_3:10631298-10631317 | Msa0798060:intron | 45.0% | |
| GATTCAACTCAGCAGCAAGT+GGG | + | chr5_3:10631359-10631378 | Msa0798060:intron | 45.0% | |
| ! | TGGTGGAATGGATTTGAGCA+AGG | - | chr5_3:10631486-10631505 | None:intergenic | 45.0% |
| !! | TTTTCGTGGAGATGTTGGCT+TGG | - | chr5_3:10631874-10631893 | None:intergenic | 45.0% |
| TAAAGCAGCTGCAAGAGCTT+TGG | + | chr5_3:10632034-10632053 | Msa0798060:CDS | 45.0% | |
| !! | AGCTGCAAGAGCTTTGGATA+AGG | + | chr5_3:10632040-10632059 | Msa0798060:CDS | 45.0% |
| !! | GCTGCAAGAGCTTTGGATAA+GGG | + | chr5_3:10632041-10632060 | Msa0798060:CDS | 45.0% |
| !! | CTGCAAGAGCTTTGGATAAG+GGG | + | chr5_3:10632042-10632061 | Msa0798060:CDS | 45.0% |
| !! | AAATTAAAAAAATTATTAGT+AGG | + | chr5_3:10627181-10627200 | Msa0798060:intron | 5.0% |
| GCCATGGACTCTGACAAAGA+TGG | + | chr5_3:10625553-10625572 | Msa0798060:CDS | 50.0% | |
| GCCATCTTTGTCAGAGTCCA+TGG | - | chr5_3:10625557-10625576 | None:intergenic | 50.0% | |
| !! | GGTGTTGATGGTGATGGAGA+TGG | + | chr5_3:10625769-10625788 | Msa0798060:CDS | 50.0% |
| GCAATTGGGGGAACTCATTG+AGG | - | chr5_3:10626745-10626764 | None:intergenic | 50.0% | |
| CGGTGGAGATAAGCAATTGG+GGG | - | chr5_3:10626757-10626776 | None:intergenic | 50.0% | |
| ! | TGAGATGCCATTTCCGACAG+CGG | - | chr5_3:10627860-10627879 | None:intergenic | 50.0% |
| CTGTCGGAAATGGCATCTCA+AGG | + | chr5_3:10627860-10627879 | Msa0798060:intron | 50.0% | |
| GGTAACGCTAACGATGTCGA+TGG | + | chr5_3:10627881-10627900 | Msa0798060:intron | 50.0% | |
| CACCAATTGTCAACCTCCAC+CGG | + | chr5_3:10627959-10627978 | Msa0798060:intron | 50.0% | |
| TTCCGGTGGAGGTTGACAAT+TGG | - | chr5_3:10627964-10627983 | None:intergenic | 50.0% | |
| TAAAGTTAGGGTTCCGGTGG+AGG | - | chr5_3:10627975-10627994 | None:intergenic | 50.0% | |
| TGGTAAAGTTAGGGTTCCGG+TGG | - | chr5_3:10627978-10627997 | None:intergenic | 50.0% | |
| ! | CGACGGTGGTGGTAAAGTTA+GGG | - | chr5_3:10627987-10628006 | None:intergenic | 50.0% |
| !! | GATAATGGGACTATCGAGGG+CGG | + | chr5_3:10628280-10628299 | Msa0798060:intron | 50.0% |
| TCTAGTGGAAGGGTTCCACA+AGG | - | chr5_3:10628410-10628429 | None:intergenic | 50.0% | |
| GCAATCCCTCAAAACCACCA+AGG | - | chr5_3:10628845-10628864 | None:intergenic | 50.0% | |
| ! | CACTTTTCGCAAGGATGCAC+AGG | - | chr5_3:10628867-10628886 | None:intergenic | 50.0% |
| ! | TGAGGATGATCAAGTGCTGC+TGG | + | chr5_3:10629020-10629039 | Msa0798060:intron | 50.0% |
| GGTCAAACAAGACGTAGACG+AGG | - | chr5_3:10629579-10629598 | None:intergenic | 50.0% | |
| TGAAAATGAGGGCGAAGGAG+AGG | - | chr5_3:10629637-10629656 | None:intergenic | 50.0% | |
| ! | TCGCACGCCATTGATAGTTC+AGG | - | chr5_3:10630330-10630349 | None:intergenic | 50.0% |
| !!! | CCGTTATAGCGTTTTGGGGA+TGG | + | chr5_3:10630876-10630895 | Msa0798060:intron | 50.0% |
| GGATTCAACTCAGCAGCAAG+TGG | + | chr5_3:10631358-10631377 | Msa0798060:intron | 50.0% | |
| GTCGATGGCCAAAACGACAC+CGG | + | chr5_3:10627896-10627915 | Msa0798060:intron | 55.0% | |
| CGTAAGTTGCTGAGACCAGC+CGG | - | chr5_3:10627918-10627937 | None:intergenic | 55.0% | |
| !! | CGGCTGGTCTCAGCAACTTA+CGG | + | chr5_3:10627916-10627935 | Msa0798060:intron | 55.0% |
| CTGGTCTCAGCAACTTACGG+TGG | + | chr5_3:10627919-10627938 | Msa0798060:intron | 55.0% | |
| ! | GCGACGGTGGTGGTAAAGTT+AGG | - | chr5_3:10627988-10628007 | None:intergenic | 55.0% |
| GAAGATGAAGAGAGCGACGG+TGG | - | chr5_3:10628001-10628020 | None:intergenic | 55.0% | |
| ! | AATGGAAGAGTGGGTAGCGG+TGG | - | chr5_3:10628043-10628062 | None:intergenic | 55.0% |
| TCTGGCAAACTTGCGATCGG+AGG | - | chr5_3:10628155-10628174 | None:intergenic | 55.0% | |
| ATGGCCAAAACGACACCGGC+TGG | + | chr5_3:10627900-10627919 | Msa0798060:intron | 60.0% | |
| !!! | GAGACCAGCCGGTGTCGTTT+TGG | - | chr5_3:10627907-10627926 | None:intergenic | 60.0% |
| GATGAAGAGAGCGACGGTGG+TGG | - | chr5_3:10627998-10628017 | None:intergenic | 60.0% | |
| GTGGAAGGGTTCCACAAGGC+AGG | - | chr5_3:10628406-10628425 | None:intergenic | 60.0% | |
| TTGCAGCCACGCGCCGCTGT+CGG | + | chr5_3:10627844-10627863 | Msa0798060:intron | 70.0% | |
| CCATTTCCGACAGCGGCGCG+TGG | - | chr5_3:10627853-10627872 | None:intergenic | 70.0% | |
| CCACGCGCCGCTGTCGGAAA+TGG | + | chr5_3:10627850-10627869 | Msa0798060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 10625283 | 10632079 | 10625283 | ID=Msa0798060;Name=Msa0798060 |
| chr5_3 | mRNA | 10625283 | 10632079 | 10625283 | ID=Msa0798060-mRNA-1;Parent=Msa0798060;Name=Msa0798060-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0|0|1|0|0|4|0|238 |
| chr5_3 | exon | 10625283 | 10625475 | 10625283 | ID=Msa0798060-mRNA-1:exon:4425;Parent=Msa0798060-mRNA-1 |
| chr5_3 | exon | 10625485 | 10625704 | 10625485 | ID=Msa0798060-mRNA-1:exon:4426;Parent=Msa0798060-mRNA-1 |
| chr5_3 | exon | 10625723 | 10625809 | 10625723 | ID=Msa0798060-mRNA-1:exon:4427;Parent=Msa0798060-mRNA-1 |
| chr5_3 | exon | 10631863 | 10632079 | 10631863 | ID=Msa0798060-mRNA-1:exon:4428;Parent=Msa0798060-mRNA-1 |
| chr5_3 | CDS | 10625283 | 10625475 | 10625283 | ID=Msa0798060-mRNA-1:cds;Parent=Msa0798060-mRNA-1 |
| chr5_3 | CDS | 10625485 | 10625704 | 10625485 | ID=Msa0798060-mRNA-1:cds;Parent=Msa0798060-mRNA-1 |
| chr5_3 | CDS | 10625723 | 10625809 | 10625723 | ID=Msa0798060-mRNA-1:cds;Parent=Msa0798060-mRNA-1 |
| chr5_3 | CDS | 10631863 | 10632079 | 10631863 | ID=Msa0798060-mRNA-1:cds;Parent=Msa0798060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
