AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0836630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836630 MtrunA17_Chr5g0402361 87.454 271 18 2 1 270 106 361 6.22e-163 456
Msa0836630 MtrunA17_Chr5g0402361 94.624 186 10 0 83 268 1 186 7.08e-122 352
Msa0836630 MtrunA17_Chr5g0402361 31.317 281 119 6 12 262 45 281 8.32e-19 84.7
Msa0836630 MtrunA17_Chr5g0402331 92.593 189 13 1 83 270 1 189 7.83e-122 345
Msa0836630 MtrunA17_Chr5g0402331 91.358 81 7 0 1 81 107 187 2.71e-44 148
Msa0836630 MtrunA17_Chr4g0044961 46.316 190 92 3 83 263 1 189 7.95e-48 157
Msa0836630 MtrunA17_Chr4g0044961 49.315 73 37 0 11 83 124 196 1.77e-19 84.0
Msa0836630 MtrunA17_Chr5g0402351 87.059 85 11 0 114 198 7 91 1.94e-45 148
Msa0836630 MtrunA17_Chr1g0161211 40.113 177 97 5 90 264 12 181 2.69e-32 117
Msa0836630 MtrunA17_Chr1g0161211 56.716 67 29 0 14 80 118 184 5.34e-19 82.8
Msa0836630 MtrunA17_Chr1g0161211 28.889 180 86 2 14 193 45 182 2.33e-15 72.8
Msa0836630 MtrunA17_Chr3g0111371 41.176 136 77 1 128 263 3 135 6.56e-31 112
Msa0836630 MtrunA17_Chr3g0111371 46.154 65 35 0 15 79 74 138 4.89e-15 70.5
Msa0836630 MtrunA17_Chr3g0111371 26.816 179 85 2 13 191 3 135 2.20e-12 63.2
Msa0836630 MtrunA17_Chr8g0391691 44.681 141 75 2 130 268 36 175 1.47e-29 110
Msa0836630 MtrunA17_Chr8g0391691 57.627 59 25 0 14 72 108 166 3.57e-17 77.4
Msa0836630 MtrunA17_Chr8g0391691 29.480 173 80 2 15 187 36 166 1.20e-14 70.5
Msa0836630 MtrunA17_Chr5g0434951 41.481 135 79 0 129 263 3 137 9.91e-29 106
Msa0836630 MtrunA17_Chr5g0434951 48.387 62 32 0 15 76 76 137 1.81e-14 68.9
Msa0836630 MtrunA17_Chr5g0434951 27.528 178 86 2 13 190 2 136 4.51e-12 62.4
Msa0836630 MtrunA17_Chr8g0392951 38.129 139 86 0 129 267 23 161 4.17e-28 105
Msa0836630 MtrunA17_Chr8g0392951 40.789 76 40 1 5 80 91 161 4.53e-12 62.8
Msa0836630 MtrunA17_Chr1g0169581 36.957 138 84 1 129 263 3 140 9.70e-26 99.0
Msa0836630 MtrunA17_Chr1g0169581 46.154 65 35 0 12 76 76 140 1.04e-15 72.4
Msa0836630 MtrunA17_Chr1g0169581 26.966 178 90 2 13 190 2 139 6.24e-12 62.0
Msa0836630 MtrunA17_Chr6g0482731 36.029 136 86 1 129 263 25 160 3.59e-25 98.6
Msa0836630 MtrunA17_Chr6g0482731 42.029 69 40 0 16 84 100 168 1.70e-12 64.3
Msa0836630 MtrunA17_Chr7g0245911 37.989 179 91 6 102 267 23 194 9.86e-25 97.8
Msa0836630 MtrunA17_Chr7g0245911 45.714 70 37 1 12 80 125 194 5.34e-13 66.2
Msa0836630 MtrunA17_Chr8g0351681 38.514 148 82 3 130 268 49 196 5.31e-24 95.9
Msa0836630 MtrunA17_Chr8g0351681 50.000 66 32 1 12 76 126 191 1.75e-13 67.4
Msa0836630 MtrunA17_Chr4g0033601 37.589 141 85 2 129 266 4 144 6.44e-23 91.7
Msa0836630 MtrunA17_Chr4g0033601 44.776 67 35 1 12 76 75 141 1.33e-11 61.2
Msa0836630 MtrunA17_Chr7g0256171 40.278 144 83 2 130 270 5 148 3.20e-22 90.1
Msa0836630 MtrunA17_Chr7g0256171 53.333 60 26 1 19 76 82 141 1.79e-11 60.8
Msa0836630 MtrunA17_Chr1g0169621 33.129 163 81 1 129 263 3 165 7.70e-22 89.4
Msa0836630 MtrunA17_Chr1g0169621 50.746 67 33 0 12 78 101 167 3.74e-16 74.3
Msa0836630 MtrunA17_Chr1g0169621 28.492 179 111 2 13 190 2 164 1.95e-15 72.4
Msa0836630 MtrunA17_Chr7g0225921 35.252 139 89 1 127 264 3 141 1.68e-21 87.8
Msa0836630 MtrunA17_Chr2g0329371 38.194 144 84 2 128 266 62 205 4.26e-21 88.6
Msa0836630 MtrunA17_Chr1g0188171 36.957 138 80 2 132 265 14 148 4.53e-21 87.0
Msa0836630 MtrunA17_Chr1g0188171 45.588 68 37 0 13 80 83 150 9.49e-13 64.3
Msa0836630 MtrunA17_Chr3g0116151 34.848 132 86 0 132 263 8 139 1.22e-20 85.5
Msa0836630 MtrunA17_Chr3g0116141 34.848 132 86 0 132 263 7 138 1.43e-20 85.1
Msa0836630 MtrunA17_Chr6g0459231 34.351 131 86 0 134 264 12 142 1.77e-20 85.1
Msa0836630 MtrunA17_Chr7g0256701 36.429 140 83 3 130 263 73 212 4.37e-20 85.9
Msa0836630 MtrunA17_Chr7g0256701 51.515 66 31 1 12 76 147 212 5.06e-16 75.1
Msa0836630 MtrunA17_Chr3g0121191 38.028 142 73 3 130 268 93 222 5.98e-20 85.9
Msa0836630 MtrunA17_Chr3g0121191 47.826 69 36 0 9 77 150 218 8.44e-15 72.0
Msa0836630 MtrunA17_Chr1g0185001 32.877 146 95 1 122 264 1 146 7.05e-20 83.6
Msa0836630 MtrunA17_Chr1g0185001 43.750 64 36 0 14 77 83 146 4.82e-11 59.7
Msa0836630 MtrunA17_Chr1g0166281 34.899 149 90 2 120 264 2 147 1.09e-19 83.2
Msa0836630 MtrunA17_Chr3g0093271 31.720 186 114 4 83 264 22 198 1.55e-19 84.0
Msa0836630 MtrunA17_Chr3g0093271 26.705 176 87 2 15 190 63 196 5.50e-12 63.5
Msa0836630 MtrunA17_Chr7g0254731 35.252 139 83 2 130 264 12 147 8.94e-19 80.9
Msa0836630 MtrunA17_Chr7g0254731 26.705 176 87 2 15 190 12 145 1.43e-12 63.9
Msa0836630 MtrunA17_Chr7g0254731 43.939 66 37 0 13 78 83 148 5.21e-11 59.7
Msa0836630 MtrunA17_Chr4g0057661 32.836 134 90 0 130 263 6 139 3.29e-18 79.0
Msa0836630 MtrunA17_Chr8g0373691 29.412 153 101 2 118 263 35 187 4.28e-18 80.1
Msa0836630 MtrunA17_Chr5g0440931 35.252 139 83 2 130 264 12 147 4.45e-18 79.0
Msa0836630 MtrunA17_Chr5g0440931 26.705 176 87 2 15 190 12 145 2.90e-12 63.2
Msa0836630 MtrunA17_Chr6g0460211 35.252 139 83 2 130 264 12 147 5.47e-18 78.6
Msa0836630 MtrunA17_Chr6g0460211 26.705 176 87 2 15 190 12 145 3.43e-12 62.8
Msa0836630 MtrunA17_Chr4g0057641 32.836 134 90 0 130 263 6 139 7.46e-18 78.2
Msa0836630 MtrunA17_Chr4g0064231 34.225 187 100 5 99 266 37 219 2.57e-17 78.6
Msa0836630 MtrunA17_Chr4g0064231 48.485 66 32 1 13 76 151 216 9.19e-11 60.5
Msa0836630 MtrunA17_Chr4g0057651 33.088 136 90 1 130 265 6 140 5.15e-17 75.9
Msa0836630 MtrunA17_Chr6g0450921 32.903 155 101 3 112 265 12 164 1.78e-16 75.1
Msa0836630 MtrunA17_Chr6g0450921 27.624 181 89 1 12 192 26 164 2.73e-13 66.2
Msa0836630 MtrunA17_Chr7g0274101 36.364 132 83 1 135 265 17 148 1.86e-16 74.3
Msa0836630 MtrunA17_Chr7g0245231 32.903 155 101 3 112 265 13 165 1.91e-16 75.1
Msa0836630 MtrunA17_Chr7g0245231 26.702 191 98 1 7 197 22 170 1.14e-13 67.4
Msa0836630 MtrunA17_Chr8g0366401 28.986 138 94 1 130 263 17 154 1.00e-15 72.8
Msa0836630 MtrunA17_Chr4g0062221 28.058 139 95 2 129 263 10 147 8.11e-15 70.5
Msa0836630 MtrunA17_Chr3g0125311 31.373 153 82 5 130 264 13 160 1.90e-14 69.3
Msa0836630 MtrunA17_Chr8g0368681 28.859 149 98 4 122 263 1 148 2.27e-14 69.3
Msa0836630 MtrunA17_Chr7g0267751 31.818 132 88 1 135 266 445 574 3.12e-14 72.4
Msa0836630 MtrunA17_Chr5g0396261 35.714 98 58 2 169 262 16 112 3.86e-14 67.4
Msa0836630 MtrunA17_Chr5g0396261 40.625 64 38 0 12 75 49 112 5.74e-11 58.5
Msa0836630 MtrunA17_Chr1g0176751 32.117 137 89 2 131 266 430 563 7.48e-14 71.2
Msa0836630 MtrunA17_Chr5g0441691 31.429 140 95 1 131 270 374 512 9.25e-14 70.9
Msa0836630 MtrunA17_Chr1g0157131 31.159 138 90 2 131 266 380 514 9.71e-14 70.9
Msa0836630 MtrunA17_Chr1g0170281 32.353 136 90 1 131 266 424 557 1.21e-13 70.5
Msa0836630 MtrunA17_Chr1g0160151 31.469 143 89 4 129 264 21 161 2.37e-13 66.6
Msa0836630 MtrunA17_Chr0c02g0489761 31.429 140 95 1 131 270 384 522 3.10e-13 69.3
Msa0836630 MtrunA17_Chr5g0448721 31.618 136 91 1 131 266 402 535 3.26e-13 69.3
Msa0836630 MtrunA17_Chr4g0068501 28.289 152 104 3 117 263 3 154 3.73e-13 65.9
Msa0836630 MtrunA17_Chr5g0444171 30.882 136 93 1 131 266 398 532 6.26e-13 68.6
Msa0836630 MtrunA17_Chr5g0397101 31.159 138 90 2 131 266 372 506 1.36e-12 67.4
Msa0836630 MtrunA17_Chr1g0200601 32.353 136 90 1 131 266 336 469 1.49e-12 67.0
Msa0836630 MtrunA17_Chr1g0173541 34.091 132 87 0 135 266 362 493 1.64e-12 67.0
Msa0836630 MtrunA17_Chr4g0074811 29.710 138 92 2 131 266 397 531 2.81e-12 66.2
Msa0836630 MtrunA17_Chr8g0385341 33.088 136 89 1 131 266 336 469 4.00e-12 65.9
Msa0836630 MtrunA17_Chr8g0387671 30.435 138 91 2 131 266 372 506 6.44e-12 65.5
Msa0836630 MtrunA17_Chr7g0242561 28.986 138 98 0 129 266 360 497 6.65e-12 65.5
Msa0836630 MtrunA17_Chr5g0405421 31.618 136 80 3 135 263 411 540 6.82e-12 65.5
Msa0836630 MtrunA17_Chr7g0257751 31.061 132 91 0 135 266 368 499 8.17e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836630 AT2G15680.1 43.085 188 94 3 83 263 1 182 3.80e-44 148
Msa0836630 AT2G15680.1 50.725 69 34 0 11 79 117 185 1.84e-19 84.0
Msa0836630 AT5G37770.1 41.958 143 78 1 129 266 16 158 2.35e-32 117
Msa0836630 AT5G37770.1 50.000 62 31 0 15 76 94 155 1.84e-15 72.4
Msa0836630 AT5G37770.1 27.717 184 94 3 14 196 16 161 4.57e-13 65.9
Msa0836630 AT5G37770.2 41.958 143 78 1 129 266 16 158 2.35e-32 117
Msa0836630 AT5G37770.2 50.000 62 31 0 15 76 94 155 1.84e-15 72.4
Msa0836630 AT5G37770.2 27.717 184 94 3 14 196 16 161 4.57e-13 65.9
Msa0836630 AT1G24620.1 44.681 141 75 2 130 268 37 176 3.34e-32 117
Msa0836630 AT1G24620.1 53.623 69 31 1 14 81 109 177 4.04e-18 80.5
Msa0836630 AT1G66400.1 40.426 141 77 2 129 264 14 152 1.51e-29 109
Msa0836630 AT1G66400.1 47.619 63 33 0 15 77 90 152 2.53e-15 72.0
Msa0836630 AT1G66400.1 29.670 182 86 3 14 193 14 155 7.61e-15 70.9
Msa0836630 AT1G18210.2 39.416 137 80 1 127 263 20 153 4.54e-29 108
Msa0836630 AT1G18210.2 48.387 62 32 0 15 76 92 153 5.89e-14 68.6
Msa0836630 AT1G18210.2 27.528 178 83 2 14 191 22 153 4.89e-13 66.2
Msa0836630 AT1G18210.1 39.416 137 80 1 127 263 20 153 4.54e-29 108
Msa0836630 AT1G18210.1 48.387 62 32 0 15 76 92 153 5.89e-14 68.6
Msa0836630 AT1G18210.1 27.528 178 83 2 14 191 22 153 4.89e-13 66.2
Msa0836630 AT5G17470.1 43.885 139 74 3 134 268 6 144 8.25e-29 107
Msa0836630 AT5G17470.1 44.048 84 42 2 3 83 64 145 1.30e-14 69.7
Msa0836630 AT3G03400.1 44.000 125 65 2 134 254 9 132 1.40e-27 103
Msa0836630 AT3G03400.1 52.727 55 26 0 13 67 78 132 1.79e-13 66.6
Msa0836630 AT2G36180.1 43.662 142 75 3 131 268 1 141 5.59e-27 102
Msa0836630 AT2G36180.1 43.902 82 44 1 3 82 62 143 5.36e-14 68.2
Msa0836630 AT5G42380.1 33.149 181 115 2 85 263 8 184 1.55e-26 102
Msa0836630 AT1G73630.1 37.671 146 87 2 119 263 8 150 6.14e-26 100
Msa0836630 AT1G73630.1 43.750 64 36 0 15 78 89 152 1.81e-12 64.3
Msa0836630 AT2G41100.4 29.151 271 147 7 15 267 12 255 5.47e-25 101
Msa0836630 AT2G41100.1 29.151 271 147 7 15 267 12 255 5.47e-25 101
Msa0836630 AT2G43290.1 37.931 145 82 2 130 266 65 209 3.09e-23 94.7
Msa0836630 AT2G43290.1 47.826 69 34 1 10 76 138 206 3.90e-12 64.3
Msa0836630 AT1G76650.1 32.184 174 111 2 96 263 4 176 4.73e-23 93.2
Msa0836630 AT1G76650.3 32.184 174 111 2 96 263 4 176 4.73e-23 93.2
Msa0836630 AT3G59440.1 38.028 142 80 3 130 266 51 189 4.93e-23 93.6
Msa0836630 AT3G50770.1 33.333 174 101 3 96 263 39 203 9.49e-23 93.2
Msa0836630 AT4G14640.1 37.143 140 81 2 130 265 13 149 1.06e-21 89.0
Msa0836630 AT4G14640.1 45.455 66 36 0 13 78 84 149 1.31e-11 61.6
Msa0836630 AT1G05990.1 39.007 141 82 2 130 266 5 145 5.02e-21 87.0
Msa0836630 AT1G05990.1 49.206 63 30 1 16 76 80 142 8.44e-11 59.3
Msa0836630 AT3G50360.1 36.957 138 86 1 127 263 24 161 9.47e-21 87.0
Msa0836630 AT3G50360.1 28.889 180 86 1 12 191 24 161 1.04e-15 73.6
Msa0836630 AT1G76640.1 35.294 153 95 2 115 263 6 158 3.44e-20 85.1
Msa0836630 AT1G76640.1 31.126 151 82 3 10 151 17 154 3.64e-11 60.8
Msa0836630 AT3G07490.1 36.806 144 88 2 130 270 5 148 3.61e-20 85.1
Msa0836630 AT3G22930.1 36.691 139 86 2 130 266 35 173 8.85e-20 84.3
Msa0836630 AT3G22930.1 46.154 65 35 0 13 77 106 170 5.89e-11 60.5
Msa0836630 AT4G14640.2 36.508 126 73 2 144 265 9 131 1.28e-19 82.8
Msa0836630 AT4G14640.2 45.455 66 36 0 13 78 66 131 8.34e-12 61.6
Msa0836630 AT4G03290.1 36.111 144 86 2 130 267 5 148 4.54e-19 82.0
Msa0836630 AT1G66410.1 35.252 139 83 2 130 264 12 147 3.17e-18 79.7
Msa0836630 AT1G66410.1 26.705 176 87 2 15 190 12 145 3.24e-12 63.2
Msa0836630 AT1G66410.1 43.939 66 37 0 13 78 83 148 9.05e-11 59.3
Msa0836630 AT5G21274.1 35.971 139 82 2 130 264 12 147 3.17e-18 79.7
Msa0836630 AT5G21274.1 26.705 176 87 2 15 190 12 145 3.27e-12 63.2
Msa0836630 AT5G21274.1 45.455 66 36 0 13 78 83 148 9.23e-11 59.3
Msa0836630 AT5G37780.1 35.252 139 83 2 130 264 12 147 3.17e-18 79.7
Msa0836630 AT5G37780.1 26.705 176 87 2 15 190 12 145 3.24e-12 63.2
Msa0836630 AT5G37780.1 43.939 66 37 0 13 78 83 148 9.05e-11 59.3
Msa0836630 AT2G27030.3 34.965 143 86 2 130 268 12 151 3.45e-18 80.5
Msa0836630 AT2G27030.3 27.119 177 87 2 15 191 12 146 2.82e-12 64.3
Msa0836630 AT2G27030.3 36.957 92 58 0 13 104 83 174 2.18e-11 61.6
Msa0836630 AT3G56800.1 35.971 139 82 2 130 264 12 147 4.64e-18 79.3
Msa0836630 AT3G56800.1 27.273 176 86 2 15 190 12 145 2.81e-12 63.5
Msa0836630 AT2G41110.1 35.971 139 82 2 130 264 12 147 4.64e-18 79.3
Msa0836630 AT2G41110.1 27.273 176 86 2 15 190 12 145 2.81e-12 63.5
Msa0836630 AT2G27030.1 35.971 139 82 2 130 264 12 147 4.64e-18 79.3
Msa0836630 AT2G27030.1 27.273 176 86 2 15 190 12 145 2.81e-12 63.5
Msa0836630 AT3G43810.2 34.694 147 87 3 130 270 12 155 4.96e-18 80.9
Msa0836630 AT3G43810.2 26.554 177 88 2 15 191 12 146 4.24e-12 64.3
Msa0836630 AT3G43810.1 35.252 139 83 2 130 264 12 147 7.55e-18 78.6
Msa0836630 AT3G43810.1 26.705 176 87 2 15 190 12 145 4.74e-12 62.8
Msa0836630 AT4G12860.1 36.986 146 89 2 128 270 3 148 8.03e-18 78.6
Msa0836630 AT2G41410.1 32.857 140 88 4 130 264 70 208 2.68e-17 79.0
Msa0836630 AT2G41410.1 41.429 70 40 1 11 79 141 210 2.59e-14 70.5
Msa0836630 AT1G76650.2 29.885 174 105 3 96 263 4 166 3.21e-17 77.4
Msa0836630 AT3G03410.1 35.338 133 78 1 132 264 4 128 7.30e-17 75.5
Msa0836630 AT2G41100.7 27.530 247 134 7 39 267 1 220 7.81e-17 79.0
Msa0836630 AT2G41100.7 26.087 207 119 4 15 218 66 241 8.06e-13 67.4
Msa0836630 AT2G41100.6 27.530 247 134 7 39 267 1 220 7.81e-17 79.0
Msa0836630 AT2G41100.6 26.087 207 119 4 15 218 66 241 8.06e-13 67.4
Msa0836630 AT2G41100.3 27.530 247 134 7 39 267 1 220 7.81e-17 79.0
Msa0836630 AT2G41100.3 26.087 207 119 4 15 218 66 241 8.06e-13 67.4
Msa0836630 AT1G32250.1 28.767 146 89 3 129 263 15 156 1.38e-16 75.9
Msa0836630 AT3G10190.1 33.088 136 89 2 130 263 70 205 2.31e-16 76.3
Msa0836630 AT3G10190.1 49.206 63 31 1 15 76 143 205 8.27e-13 66.2
Msa0836630 AT5G44460.1 36.364 165 89 7 114 263 11 174 2.16e-15 72.8
Msa0836630 AT2G41110.2 33.113 151 82 3 130 264 12 159 2.71e-15 72.0
Msa0836630 AT5G04870.1 33.577 137 87 2 131 266 456 589 2.92e-15 75.9
Msa0836630 AT4G04695.1 34.559 136 88 1 131 266 337 471 2.93e-15 75.5
Msa0836630 AT5G37780.4 34.400 125 75 2 144 264 13 134 3.08e-15 71.2
Msa0836630 AT1G66410.2 34.400 125 75 2 144 264 36 157 4.06e-15 71.6
Msa0836630 AT4G37010.1 30.435 138 95 1 127 263 24 161 5.22e-15 71.2
Msa0836630 AT4G37010.2 30.435 138 95 1 127 263 28 165 5.91e-15 71.2
Msa0836630 AT5G37780.3 34.400 125 75 2 144 264 52 173 6.68e-15 71.2
Msa0836630 AT1G66410.4 41.053 95 49 2 174 264 20 111 7.47e-15 69.7
Msa0836630 AT1G66410.4 43.939 66 37 0 13 78 47 112 2.63e-11 59.7
Msa0836630 AT1G66410.3 41.053 95 49 2 174 264 20 111 7.47e-15 69.7
Msa0836630 AT1G66410.3 43.939 66 37 0 13 78 47 112 2.63e-11 59.7
Msa0836630 AT5G37780.2 34.400 125 75 2 144 264 41 162 7.52e-15 70.9
Msa0836630 AT1G18530.1 31.884 138 89 3 130 263 7 143 9.05e-15 70.5
Msa0836630 AT5G23580.1 33.835 133 86 1 131 263 328 458 9.34e-15 74.3
Msa0836630 AT2G17290.1 34.559 136 87 1 131 266 391 524 9.94e-15 74.3
Msa0836630 AT2G17290.2 34.559 136 87 1 131 266 391 524 9.94e-15 74.3
Msa0836630 AT3G43810.4 41.053 95 49 2 174 264 20 111 1.41e-14 68.9
Msa0836630 AT3G43810.4 43.939 66 37 0 13 78 47 112 5.48e-11 58.9
Msa0836630 AT3G43810.3 41.053 95 49 2 174 264 20 111 1.41e-14 68.9
Msa0836630 AT3G43810.3 43.939 66 37 0 13 78 47 112 5.48e-11 58.9
Msa0836630 AT5G19360.1 33.088 136 90 1 131 266 374 508 1.87e-14 73.2
Msa0836630 AT5G12180.1 33.088 136 90 1 131 266 379 513 2.06e-14 73.2
Msa0836630 AT3G03000.1 30.714 140 93 3 130 266 20 158 4.86e-14 68.6
Msa0836630 AT3G10660.2 32.353 136 90 1 131 266 492 625 5.05e-14 72.0
Msa0836630 AT3G10660.1 32.353 136 90 1 131 266 492 625 5.05e-14 72.0
Msa0836630 AT4G04720.2 33.088 136 90 1 131 266 385 519 6.40e-14 71.6
Msa0836630 AT4G04720.1 33.088 136 90 1 131 266 385 519 6.40e-14 71.6
Msa0836630 AT4G38230.1 34.559 136 87 1 131 266 186 319 6.70e-14 70.9
Msa0836630 AT1G21550.1 31.973 147 89 4 129 265 9 154 7.10e-14 68.2
Msa0836630 AT1G21550.1 44.118 68 36 1 13 78 87 154 3.30e-11 60.8
Msa0836630 AT4G38230.2 34.559 136 87 1 131 266 360 493 8.71e-14 71.2
Msa0836630 AT4G38230.4 34.559 136 87 1 131 266 330 463 8.96e-14 71.2
Msa0836630 AT4G38230.3 34.559 136 87 1 131 266 330 463 8.96e-14 71.2
Msa0836630 AT5G12480.2 34.307 137 89 1 131 266 271 407 1.30e-13 70.5
Msa0836630 AT5G12480.1 34.307 137 89 1 131 266 365 501 1.38e-13 70.9
Msa0836630 AT4G04700.1 33.835 133 87 1 131 263 337 468 1.68e-13 70.5
Msa0836630 AT4G09570.1 34.559 136 87 2 131 266 331 464 1.82e-13 70.5
Msa0836630 AT2G17890.1 34.559 136 76 4 135 263 420 549 1.99e-13 70.5
Msa0836630 AT2G41090.1 31.852 135 90 1 130 264 12 144 3.04e-13 67.0
Msa0836630 AT1G35670.1 33.824 136 88 2 131 266 332 465 3.74e-13 69.3
Msa0836630 AT2G38910.1 32.593 135 89 1 131 265 440 572 5.18e-13 68.9
Msa0836630 AT4G04710.2 33.088 136 90 1 131 266 338 472 5.57e-13 68.9
Msa0836630 AT4G04710.1 33.088 136 90 1 131 266 351 485 5.81e-13 68.9
Msa0836630 AT4G04710.3 33.088 136 90 1 131 266 324 458 5.89e-13 68.9
Msa0836630 AT4G23650.1 32.609 138 88 2 131 266 384 518 6.29e-13 68.9
Msa0836630 AT4G36070.1 33.099 142 82 4 129 263 377 512 6.32e-13 68.9
Msa0836630 AT3G25600.1 28.986 138 93 3 130 263 12 148 6.43e-13 65.5
Msa0836630 AT3G51850.1 28.659 164 116 1 104 266 332 495 6.47e-13 68.6
Msa0836630 AT4G36070.2 33.099 142 82 4 129 263 377 512 6.48e-13 68.9
Msa0836630 AT4G35310.2 32.353 136 90 1 131 266 403 536 7.62e-13 68.6
Msa0836630 AT4G35310.1 32.353 136 90 1 131 266 403 536 7.62e-13 68.6
Msa0836630 AT4G04740.4 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT4G04740.6 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT4G04740.5 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT4G04740.3 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT4G04740.1 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT4G04740.7 30.147 136 94 1 131 266 374 508 1.43e-12 67.8
Msa0836630 AT1G50700.1 31.618 136 92 1 131 266 379 513 3.92e-12 66.2
Msa0836630 AT3G57530.1 33.835 133 85 2 135 266 373 503 4.49e-12 66.2
Msa0836630 AT4G21940.2 32.353 136 91 1 131 266 407 541 9.60e-12 65.1
Msa0836630 AT5G66210.1 31.655 139 76 4 135 263 374 503 9.73e-12 65.1
Msa0836630 AT5G66210.2 31.655 139 76 4 135 263 374 503 9.73e-12 65.1
Msa0836630 AT4G04710.4 32.609 138 90 2 131 266 351 487 1.04e-11 65.1
Msa0836630 AT4G21940.1 32.353 136 91 1 131 266 407 541 1.15e-11 65.1
Msa0836630 AT1G18890.1 31.138 167 108 6 104 266 341 504 1.62e-11 64.7
Msa0836630 AT4G20780.1 29.508 183 100 5 103 263 8 183 1.97e-11 62.0
Msa0836630 AT5G19450.2 33.577 137 90 1 131 266 363 499 6.28e-11 62.8
Msa0836630 AT5G19450.1 33.577 137 90 1 131 266 363 499 6.28e-11 62.8
Msa0836630 AT3G20410.2 30.882 136 93 1 131 266 397 531 8.74e-11 62.4
Msa0836630 AT3G20410.1 30.882 136 93 1 131 266 397 531 8.74e-11 62.4

Find 55 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAGACTTTAAAGAGTTTA+TGG 0.095878 5_4:+10160120 Msa0836630:CDS
CATTTCATTTCATCTTTCTT+TGG 0.177414 5_4:-10159953 None:intergenic
TTTCAAGTATTTGATATAAA+TGG 0.216373 5_4:+10156362 Msa0836630:CDS
TTTCAAGTATTTGATATAAA+TGG 0.216373 5_4:+10160196 Msa0836630:CDS
TGATGCAGTGAAAGCATTTA+AGG 0.222047 5_4:+10160072 Msa0836630:CDS
CCTTAGTGCTTGTAAGAAAA+TGG 0.330871 5_4:+10156448 Msa0836630:CDS
CCTTAGTGCTTGTAAGAAAA+TGG 0.341545 5_4:+10160282 Msa0836630:CDS
AAAAGCTACCATGAAACTTT+AGG 0.342938 5_4:-10159841 None:intergenic
ATGAGTTTCCTAAAGTTTCA+TGG 0.347349 5_4:+10159833 Msa0836630:CDS
CTTTGGTTGGAAACTCATTT+CGG 0.355490 5_4:-10159936 None:intergenic
CAAAGAAAGATGAAATGAAA+TGG 0.359646 5_4:+10159954 Msa0836630:CDS
GCTGCAAAAGCTTTGGATAA+GGG 0.402200 5_4:+10160037 Msa0836630:CDS
TAAAGCAGCTGCAAAAGCTT+TGG 0.411228 5_4:+10160030 Msa0836630:CDS
AATTGTCTCAAATATTTAAG+AGG 0.413219 5_4:+10160242 Msa0836630:CDS
GTCTCAAATATTCAAGAGGT+TGG 0.419812 5_4:+10156412 Msa0836630:CDS
TCTCAAATATTTAAGAGGTT+AGG 0.421604 5_4:+10160247 Msa0836630:CDS
TCATTTCATCTTTCTTTGGT+TGG 0.424902 5_4:-10159949 None:intergenic
AAGCTTTGGATAAGGGGATT+GGG 0.425029 5_4:+10160044 Msa0836630:CDS
AGCTGCAAAAGCTTTGGATA+AGG 0.434736 5_4:+10160036 Msa0836630:CDS
CAAAGATGGCAAGATTAGTC+TGG 0.440035 5_4:+10160000 Msa0836630:CDS
AAAGCTTTGGATAAGGGGAT+TGG 0.463563 5_4:+10160043 Msa0836630:CDS
TCTCAAATATTCAAGAGGTT+GGG 0.468698 5_4:+10156413 Msa0836630:CDS
AAAGAAAGATGAAATGAAAT+GGG 0.477872 5_4:+10159955 Msa0836630:CDS
GAGTTTATGGAAATGTTCAA+TGG 0.480442 5_4:+10156299 None:intergenic
GAGTTTATGGAAATGTTCAA+TGG 0.480442 5_4:+10160133 Msa0836630:CDS
CTTGTAAGAAAATGGTGAAA+GGG 0.492061 5_4:+10156456 Msa0836630:CDS
CTGCAAAAGCTTTGGATAAG+GGG 0.499395 5_4:+10160038 Msa0836630:CDS
AAAATGGTGAAAGGGGTTGA+TGG 0.499936 5_4:+10156464 Msa0836630:CDS
TAGATTTGAATGAGTTTACA+AGG 0.501078 5_4:+10156504 Msa0836630:CDS
TAGATTTGAATGAGTTTACA+AGG 0.501078 5_4:+10160338 Msa0836630:CDS
GTGAAAGGGGTTGATGGTGA+TGG 0.502526 5_4:+10156470 Msa0836630:CDS
GCCATCTTTGTCAGAGTCCA+TGG 0.508786 5_4:-10160095 None:intergenic
ATGGAAATGTTCAATGGAGA+AGG 0.516029 5_4:+10160139 Msa0836630:CDS
GGGGTTGATGGTGATGGAGA+TGG 0.529944 5_4:+10156476 Msa0836630:CDS
AAAATGGTGAAAGGTGTTGA+TGG 0.531030 5_4:+10160298 Msa0836630:CDS
TATTTGATATAAATGGTGAT+GGG 0.537728 5_4:+10156369 Msa0836630:CDS
GTATTTGATATAAATGGTGA+TGG 0.537784 5_4:+10156368 Msa0836630:CDS
ATGTAGTGAGATAAAAGAAG+AGG 0.544251 5_4:+10156325 Msa0836630:CDS
AGCTTTGGATAAGGGGATTG+GGG 0.547088 5_4:+10160045 Msa0836630:CDS
GTATTTGATATAAATGGTGA+TGG 0.547891 5_4:+10160202 Msa0836630:CDS
AGGTAGTAAGATAAAAGAAG+AGG 0.565885 5_4:+10160159 Msa0836630:CDS
GCTTGTAAGAAAATGGTGAA+AGG 0.569070 5_4:+10156455 Msa0836630:CDS
GGTGTTGATGGTGATGGAGA+TGG 0.571699 5_4:+10160310 Msa0836630:CDS
GTGAAAGGTGTTGATGGTGA+TGG 0.580268 5_4:+10160304 Msa0836630:CDS
AAATTCGACACAAACAAAGA+TGG 0.590764 5_4:+10159986 Msa0836630:CDS
ATTTGATATAAATGGTGATG+GGG 0.598015 5_4:+10156370 Msa0836630:CDS
AGTGAAAGCATTTAAGGCCA+TGG 0.601115 5_4:+10160078 Msa0836630:CDS
TTTACAAGGATGATGATGAA+TGG 0.601621 5_4:+10160352 Msa0836630:CDS
TATTTGATATAAATGGTGAT+GGG 0.605312 5_4:+10160203 Msa0836630:CDS
AATTGTCTCAAATATTCAAG+AGG 0.618793 5_4:+10156408 Msa0836630:CDS
GCCATGGACTCTGACAAAGA+TGG 0.639323 5_4:+10160094 Msa0836630:CDS
TTGTAAGAAAATGGTGAAAG+GGG 0.653751 5_4:+10156457 Msa0836630:CDS
GCTTGTAAGAAAATGGTGAA+AGG 0.660596 5_4:+10160289 Msa0836630:CDS
TGATGGGGAAATTAGTGCTG+AGG 0.681358 5_4:+10156385 Msa0836630:CDS
TGATGGGAAAATCAGTGCTG+AGG 0.731787 5_4:+10160219 Msa0836630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTATAAGTTTTTTTTT+AGG + chr5_4:10158137-10158156 Msa0836630:intron 10.0%
!!! TGATTATAAGTTTTTTTTTA+GGG + chr5_4:10158138-10158157 Msa0836630:intron 10.0%
!!! TTTTTATTTTTATTTTGACA+AGG + chr5_4:10158510-10158529 Msa0836630:intron 10.0%
!!! ATGATTATAAGTTTTTTTTT+AGG + chr5_4:10158137-10158156 Msa0836630:intron 10.0%
!!! TGATTATAAGTTTTTTTTTA+GGG + chr5_4:10158138-10158157 Msa0836630:intron 10.0%
!!! TTTTTATTTTTATTTTGACA+AGG + chr5_4:10158510-10158529 Msa0836630:intron 10.0%
!!! TTTCAAGTATTTGATATAAA+TGG + chr5_4:10156362-10156381 Msa0836630:CDS 15.0%
!!! TGAAATCTTTTAATCAAATT+CGG - chr5_4:10156690-10156709 None:intergenic 15.0%
!! TTATTAAGATGATTTCTATT+TGG + chr5_4:10156799-10156818 Msa0836630:intron 15.0%
!!! ATACAAATAGATGATTTTAA+CGG - chr5_4:10156842-10156861 None:intergenic 15.0%
!!! CTACAAATTTTTTTATGTAA+AGG - chr5_4:10158340-10158359 None:intergenic 15.0%
!!! TTTATAATTTGTTATTATGC+AGG - chr5_4:10159357-10159376 None:intergenic 15.0%
!!! TTATTTAGTTTAAAAACTCT+TGG + chr5_4:10159628-10159647 Msa0836630:intron 15.0%
!!! TTTCAAGTATTTGATATAAA+TGG + chr5_4:10156362-10156381 Msa0836630:CDS 15.0%
!!! TTTCAAGTATTTGATATAAA+TGG + chr5_4:10156362-10156381 Msa0836630:CDS 15.0%
!!! TGAAATCTTTTAATCAAATT+CGG - chr5_4:10156690-10156709 None:intergenic 15.0%
!! TTATTAAGATGATTTCTATT+TGG + chr5_4:10156799-10156818 Msa0836630:intron 15.0%
!!! ATACAAATAGATGATTTTAA+CGG - chr5_4:10156842-10156861 None:intergenic 15.0%
!!! CTACAAATTTTTTTATGTAA+AGG - chr5_4:10158340-10158359 None:intergenic 15.0%
!!! TTTATAATTTGTTATTATGC+AGG - chr5_4:10159357-10159376 None:intergenic 15.0%
!!! TTATTTAGTTTAAAAACTCT+TGG + chr5_4:10159628-10159647 Msa0836630:intron 15.0%
!!! TTTCAAGTATTTGATATAAA+TGG + chr5_4:10156362-10156381 Msa0836630:CDS 15.0%
!! TATTTGATATAAATGGTGAT+GGG + chr5_4:10156369-10156388 Msa0836630:CDS 20.0%
!!! TACAAATAGATGATTTTAAC+GGG - chr5_4:10156841-10156860 None:intergenic 20.0%
!! TATTTGTATAATTGTAAGCT+TGG + chr5_4:10156853-10156872 Msa0836630:intron 20.0%
!! TTATATGACAAATTCAAAGA+TGG - chr5_4:10156881-10156900 None:intergenic 20.0%
!!! ATGTGTTTTAAACACATAAT+AGG - chr5_4:10157183-10157202 None:intergenic 20.0%
!! GAAATACTAATTTACTTACA+CGG + chr5_4:10157981-10158000 Msa0836630:intron 20.0%
!!! TTGCTACTTAAATTATACTA+TGG + chr5_4:10158968-10158987 Msa0836630:intron 20.0%
!! CTACTAATATATACAAAACA+AGG - chr5_4:10159100-10159119 None:intergenic 20.0%
!!! TTAGAACTTTTGATACAATT+AGG - chr5_4:10159795-10159814 None:intergenic 20.0%
!! AAAGAAAGATGAAATGAAAT+GGG + chr5_4:10159955-10159974 Msa0836630:CDS 20.0%
!! TATTTGATATAAATGGTGAT+GGG + chr5_4:10156369-10156388 Msa0836630:CDS 20.0%
!! AATTGTCTCAAATATTTAAG+AGG + chr5_4:10160242-10160261 Msa0836630:CDS 20.0%
!! TATTTGATATAAATGGTGAT+GGG + chr5_4:10156369-10156388 Msa0836630:CDS 20.0%
!!! TACAAATAGATGATTTTAAC+GGG - chr5_4:10156841-10156860 None:intergenic 20.0%
!! TATTTGTATAATTGTAAGCT+TGG + chr5_4:10156853-10156872 Msa0836630:intron 20.0%
!! TTATATGACAAATTCAAAGA+TGG - chr5_4:10156881-10156900 None:intergenic 20.0%
!!! ATGTGTTTTAAACACATAAT+AGG - chr5_4:10157183-10157202 None:intergenic 20.0%
!! GAAATACTAATTTACTTACA+CGG + chr5_4:10157981-10158000 Msa0836630:intron 20.0%
!!! TTGCTACTTAAATTATACTA+TGG + chr5_4:10158968-10158987 Msa0836630:intron 20.0%
!! CTACTAATATATACAAAACA+AGG - chr5_4:10159100-10159119 None:intergenic 20.0%
!!! TTAGAACTTTTGATACAATT+AGG - chr5_4:10159795-10159814 None:intergenic 20.0%
!! AAAGAAAGATGAAATGAAAT+GGG + chr5_4:10159955-10159974 Msa0836630:CDS 20.0%
!! TATTTGATATAAATGGTGAT+GGG + chr5_4:10156369-10156388 Msa0836630:CDS 20.0%
!! AATTGTCTCAAATATTTAAG+AGG + chr5_4:10160242-10160261 Msa0836630:CDS 20.0%
! GTATTTGATATAAATGGTGA+TGG + chr5_4:10156368-10156387 Msa0836630:CDS 25.0%
!! ATTTGATATAAATGGTGATG+GGG + chr5_4:10156370-10156389 Msa0836630:CDS 25.0%
! AATTGTCTCAAATATTCAAG+AGG + chr5_4:10156408-10156427 Msa0836630:CDS 25.0%
! TAGATTTGAATGAGTTTACA+AGG + chr5_4:10156504-10156523 Msa0836630:CDS 25.0%
! CTTTAATAGTTACTGCTTAT+TGG + chr5_4:10156560-10156579 Msa0836630:intron 25.0%
!! AATCTTTTAATCAAATTCGG+TGG - chr5_4:10156687-10156706 None:intergenic 25.0%
!!! TGTTTTTTCTGATCTCTAAT+TGG - chr5_4:10156735-10156754 None:intergenic 25.0%
!!! ACAAATAGATGATTTTAACG+GGG - chr5_4:10156840-10156859 None:intergenic 25.0%
! TCTTTGAATGGTTAAAATGT+TGG - chr5_4:10157288-10157307 None:intergenic 25.0%
! GATATCTTACTTTCTTTGAA+TGG - chr5_4:10157300-10157319 None:intergenic 25.0%
!! ATTAGTTGTAGTTGATGTTT+AGG - chr5_4:10157398-10157417 None:intergenic 25.0%
! TTATTTAGATTGAAAGACAG+GGG - chr5_4:10157545-10157564 None:intergenic 25.0%
! CTTATTTAGATTGAAAGACA+GGG - chr5_4:10157546-10157565 None:intergenic 25.0%
! ACTTATTTAGATTGAAAGAC+AGG - chr5_4:10157547-10157566 None:intergenic 25.0%
! TGTCTTTCAATCTAAATAAG+TGG + chr5_4:10157546-10157565 Msa0836630:intron 25.0%
! ACTAAATCACAAAAAACACA+AGG - chr5_4:10157594-10157613 None:intergenic 25.0%
!! TCATTGATTGAATCTGTAAT+TGG - chr5_4:10157716-10157735 None:intergenic 25.0%
!! ACAGATTCAATCAATGATTT+TGG + chr5_4:10157719-10157738 Msa0836630:intron 25.0%
! AACATCACTAAAAACGTATA+GGG - chr5_4:10157870-10157889 None:intergenic 25.0%
! AAATATCATAAAACTGACGT+AGG + chr5_4:10157959-10157978 Msa0836630:intron 25.0%
! GATATTCATATACCATCTTT+GGG - chr5_4:10158209-10158228 None:intergenic 25.0%
! TGATATTCATATACCATCTT+TGG - chr5_4:10158210-10158229 None:intergenic 25.0%
! TGTCATAAGAACATTGTTTA+TGG - chr5_4:10158471-10158490 None:intergenic 25.0%
! TTTATAAAATAGCTGCTGAT+GGG + chr5_4:10158710-10158729 Msa0836630:intron 25.0%
!!! TTTGAGTTTCTTTTAATTGC+AGG + chr5_4:10158759-10158778 Msa0836630:intron 25.0%
! AGCAAAACAAAAAGAAAGAA+AGG - chr5_4:10158869-10158888 None:intergenic 25.0%
! AACATAACATAGAGAAACAT+AGG - chr5_4:10158903-10158922 None:intergenic 25.0%
! AATGAATACAGAACATCTTA+AGG - chr5_4:10159308-10159327 None:intergenic 25.0%
! ATTAGAATATGATTCAACTC+AGG + chr5_4:10159382-10159401 Msa0836630:intron 25.0%
!! GTTTTTGCAAAAAGTTCAAA+AGG + chr5_4:10159418-10159437 Msa0836630:intron 25.0%
! AAGTTAGAATAACTTTATGG+TGG - chr5_4:10159534-10159553 None:intergenic 25.0%
! GTGAAGTTAGAATAACTTTA+TGG - chr5_4:10159537-10159556 None:intergenic 25.0%
!!! TTTTGAGCTATATTTTTTCG+TGG - chr5_4:10159884-10159903 None:intergenic 25.0%
! CATTTCATTTCATCTTTCTT+TGG - chr5_4:10159956-10159975 None:intergenic 25.0%
! CAAAGAAAGATGAAATGAAA+TGG + chr5_4:10159954-10159973 Msa0836630:CDS 25.0%
!! CATAGACTTTAAAGAGTTTA+TGG + chr5_4:10160120-10160139 Msa0836630:CDS 25.0%
! GTATTTGATATAAATGGTGA+TGG + chr5_4:10156368-10156387 Msa0836630:CDS 25.0%
! TCTCAAATATTTAAGAGGTT+AGG + chr5_4:10160247-10160266 Msa0836630:CDS 25.0%
! TAGATTTGAATGAGTTTACA+AGG + chr5_4:10156504-10156523 Msa0836630:CDS 25.0%
! GTATTTGATATAAATGGTGA+TGG + chr5_4:10156368-10156387 Msa0836630:CDS 25.0%
!! ATTTGATATAAATGGTGATG+GGG + chr5_4:10156370-10156389 Msa0836630:CDS 25.0%
! AATTGTCTCAAATATTCAAG+AGG + chr5_4:10156408-10156427 Msa0836630:CDS 25.0%
! TAGATTTGAATGAGTTTACA+AGG + chr5_4:10156504-10156523 Msa0836630:CDS 25.0%
! CTTTAATAGTTACTGCTTAT+TGG + chr5_4:10156560-10156579 Msa0836630:intron 25.0%
!! AATCTTTTAATCAAATTCGG+TGG - chr5_4:10156687-10156706 None:intergenic 25.0%
!!! TGTTTTTTCTGATCTCTAAT+TGG - chr5_4:10156735-10156754 None:intergenic 25.0%
!!! ACAAATAGATGATTTTAACG+GGG - chr5_4:10156840-10156859 None:intergenic 25.0%
! TCTTTGAATGGTTAAAATGT+TGG - chr5_4:10157288-10157307 None:intergenic 25.0%
! GATATCTTACTTTCTTTGAA+TGG - chr5_4:10157300-10157319 None:intergenic 25.0%
!! ATTAGTTGTAGTTGATGTTT+AGG - chr5_4:10157398-10157417 None:intergenic 25.0%
! TTATTTAGATTGAAAGACAG+GGG - chr5_4:10157545-10157564 None:intergenic 25.0%
! CTTATTTAGATTGAAAGACA+GGG - chr5_4:10157546-10157565 None:intergenic 25.0%
! ACTTATTTAGATTGAAAGAC+AGG - chr5_4:10157547-10157566 None:intergenic 25.0%
! TGTCTTTCAATCTAAATAAG+TGG + chr5_4:10157546-10157565 Msa0836630:intron 25.0%
! ACTAAATCACAAAAAACACA+AGG - chr5_4:10157594-10157613 None:intergenic 25.0%
!! TCATTGATTGAATCTGTAAT+TGG - chr5_4:10157716-10157735 None:intergenic 25.0%
!! ACAGATTCAATCAATGATTT+TGG + chr5_4:10157719-10157738 Msa0836630:intron 25.0%
! AACATCACTAAAAACGTATA+GGG - chr5_4:10157870-10157889 None:intergenic 25.0%
! AAATATCATAAAACTGACGT+AGG + chr5_4:10157959-10157978 Msa0836630:intron 25.0%
! GATATTCATATACCATCTTT+GGG - chr5_4:10158209-10158228 None:intergenic 25.0%
! TGATATTCATATACCATCTT+TGG - chr5_4:10158210-10158229 None:intergenic 25.0%
! TGTCATAAGAACATTGTTTA+TGG - chr5_4:10158471-10158490 None:intergenic 25.0%
! TTTATAAAATAGCTGCTGAT+GGG + chr5_4:10158710-10158729 Msa0836630:intron 25.0%
!!! TTTGAGTTTCTTTTAATTGC+AGG + chr5_4:10158759-10158778 Msa0836630:intron 25.0%
! AGCAAAACAAAAAGAAAGAA+AGG - chr5_4:10158869-10158888 None:intergenic 25.0%
! AACATAACATAGAGAAACAT+AGG - chr5_4:10158903-10158922 None:intergenic 25.0%
! AATGAATACAGAACATCTTA+AGG - chr5_4:10159308-10159327 None:intergenic 25.0%
! ATTAGAATATGATTCAACTC+AGG + chr5_4:10159382-10159401 Msa0836630:intron 25.0%
!! GTTTTTGCAAAAAGTTCAAA+AGG + chr5_4:10159418-10159437 Msa0836630:intron 25.0%
! AAGTTAGAATAACTTTATGG+TGG - chr5_4:10159534-10159553 None:intergenic 25.0%
! GTGAAGTTAGAATAACTTTA+TGG - chr5_4:10159537-10159556 None:intergenic 25.0%
!!! TTTTGAGCTATATTTTTTCG+TGG - chr5_4:10159884-10159903 None:intergenic 25.0%
! CATTTCATTTCATCTTTCTT+TGG - chr5_4:10159956-10159975 None:intergenic 25.0%
! CAAAGAAAGATGAAATGAAA+TGG + chr5_4:10159954-10159973 Msa0836630:CDS 25.0%
!! CATAGACTTTAAAGAGTTTA+TGG + chr5_4:10160120-10160139 Msa0836630:CDS 25.0%
! GTATTTGATATAAATGGTGA+TGG + chr5_4:10156368-10156387 Msa0836630:CDS 25.0%
! TCTCAAATATTTAAGAGGTT+AGG + chr5_4:10160247-10160266 Msa0836630:CDS 25.0%
! TAGATTTGAATGAGTTTACA+AGG + chr5_4:10156504-10156523 Msa0836630:CDS 25.0%
ATGTAGTGAGATAAAAGAAG+AGG + chr5_4:10156325-10156344 Msa0836630:CDS 30.0%
TCTCAAATATTCAAGAGGTT+GGG + chr5_4:10156413-10156432 Msa0836630:CDS 30.0%
CTTGTAAGAAAATGGTGAAA+GGG + chr5_4:10156456-10156475 Msa0836630:CDS 30.0%
TTGTAAGAAAATGGTGAAAG+GGG + chr5_4:10156457-10156476 Msa0836630:CDS 30.0%
TATCTTTAACTGCATGTAAC+AGG + chr5_4:10156913-10156932 Msa0836630:intron 30.0%
TAAAAGACGCAAATGTTCTT+CGG + chr5_4:10157034-10157053 Msa0836630:intron 30.0%
! GTGATTTGAAACATTGAAAC+AGG - chr5_4:10157213-10157232 None:intergenic 30.0%
!!! TGATGACATTAGTTTTCGTT+GGG - chr5_4:10157322-10157341 None:intergenic 30.0%
!!! TTGATGACATTAGTTTTCGT+TGG - chr5_4:10157323-10157342 None:intergenic 30.0%
!! TTTTCGCATTTTGATGACAT+TGG - chr5_4:10157362-10157381 None:intergenic 30.0%
!! ATTTGTAGACATTTTGCTGT+TGG + chr5_4:10157800-10157819 Msa0836630:intron 30.0%
CAACATCACTAAAAACGTAT+AGG - chr5_4:10157871-10157890 None:intergenic 30.0%
!!! CTATACGTTTTTAGTGATGT+TGG + chr5_4:10157869-10157888 Msa0836630:intron 30.0%
!!! GTAGTTTTTTTACTGACACA+AGG + chr5_4:10158099-10158118 Msa0836630:intron 30.0%
AGATGGTATATGAATATCAG+TGG + chr5_4:10158211-10158230 Msa0836630:intron 30.0%
GATGGTATATGAATATCAGT+GGG + chr5_4:10158212-10158231 Msa0836630:intron 30.0%
CAATATTGTACAGTGATGAA+AGG - chr5_4:10158676-10158695 None:intergenic 30.0%
GTTTATAAAATAGCTGCTGA+TGG + chr5_4:10158709-10158728 Msa0836630:intron 30.0%
!!! TGGGATTCAATTTTTTCCTT+TGG + chr5_4:10158729-10158748 Msa0836630:intron 30.0%
! TAGATGTGTTATTGTGAGTT+TGG + chr5_4:10158930-10158949 Msa0836630:intron 30.0%
! AGATGTGTTATTGTGAGTTT+GGG + chr5_4:10158931-10158950 Msa0836630:intron 30.0%
! AGTTTCTAGATTTAACATCG+TGG - chr5_4:10159072-10159091 None:intergenic 30.0%
TCAGTTATTAAGTTCATACC+AGG + chr5_4:10159129-10159148 Msa0836630:intron 30.0%
!!! AAACAGGTTTTTCTAAAACC+TGG - chr5_4:10159150-10159169 None:intergenic 30.0%
TGGTGAATCAGTTTAAAAAC+AGG - chr5_4:10159166-10159185 None:intergenic 30.0%
!!! CAAAACCACCTAGTTTTATA+GGG + chr5_4:10159184-10159203 Msa0836630:intron 30.0%
TTGAATCCAACTCATAATCT+TGG + chr5_4:10159223-10159242 Msa0836630:intron 30.0%
ATCAAACCAAGATTATGAGT+TGG - chr5_4:10159232-10159251 None:intergenic 30.0%
TATGGGATTAGAACTTCAAA+AGG - chr5_4:10159283-10159302 None:intergenic 30.0%
CAGAACATCTTAAGGAATAT+GGG - chr5_4:10159300-10159319 None:intergenic 30.0%
ACAGAACATCTTAAGGAATA+TGG - chr5_4:10159301-10159320 None:intergenic 30.0%
TGAAATGCATATGATCTGTT+TGG - chr5_4:10159454-10159473 None:intergenic 30.0%
TATAACAAGGTTATGACTCA+CGG - chr5_4:10159490-10159509 None:intergenic 30.0%
! TAGAATAACTTTATGGTGGA+AGG - chr5_4:10159530-10159549 None:intergenic 30.0%
! ATTAGGCTTTAGTATGGTTA+TGG - chr5_4:10159778-10159797 None:intergenic 30.0%
! GATACAATTAGGCTTTAGTA+TGG - chr5_4:10159784-10159803 None:intergenic 30.0%
!! TAGGAAACTCATTTTTGACA+TGG - chr5_4:10159825-10159844 None:intergenic 30.0%
ATGAGTTTCCTAAAGTTTCA+TGG + chr5_4:10159833-10159852 Msa0836630:CDS 30.0%
AAAAGCTACCATGAAACTTT+AGG - chr5_4:10159844-10159863 None:intergenic 30.0%
TCATTTCATCTTTCTTTGGT+TGG - chr5_4:10159952-10159971 None:intergenic 30.0%
AAATTCGACACAAACAAAGA+TGG + chr5_4:10159986-10160005 Msa0836630:CDS 30.0%
GAGTTTATGGAAATGTTCAA+TGG + chr5_4:10160133-10160152 Msa0836630:CDS 30.0%
AGGTAGTAAGATAAAAGAAG+AGG + chr5_4:10160159-10160178 Msa0836630:CDS 30.0%
! TTTACAAGGATGATGATGAA+TGG + chr5_4:10160352-10160371 Msa0836630:CDS 30.0%
ATGTAGTGAGATAAAAGAAG+AGG + chr5_4:10156325-10156344 Msa0836630:CDS 30.0%
TCTCAAATATTCAAGAGGTT+GGG + chr5_4:10156413-10156432 Msa0836630:CDS 30.0%
CTTGTAAGAAAATGGTGAAA+GGG + chr5_4:10156456-10156475 Msa0836630:CDS 30.0%
TTGTAAGAAAATGGTGAAAG+GGG + chr5_4:10156457-10156476 Msa0836630:CDS 30.0%
TATCTTTAACTGCATGTAAC+AGG + chr5_4:10156913-10156932 Msa0836630:intron 30.0%
TAAAAGACGCAAATGTTCTT+CGG + chr5_4:10157034-10157053 Msa0836630:intron 30.0%
! GTGATTTGAAACATTGAAAC+AGG - chr5_4:10157213-10157232 None:intergenic 30.0%
!!! TGATGACATTAGTTTTCGTT+GGG - chr5_4:10157322-10157341 None:intergenic 30.0%
!!! TTGATGACATTAGTTTTCGT+TGG - chr5_4:10157323-10157342 None:intergenic 30.0%
!! TTTTCGCATTTTGATGACAT+TGG - chr5_4:10157362-10157381 None:intergenic 30.0%
!! ATTTGTAGACATTTTGCTGT+TGG + chr5_4:10157800-10157819 Msa0836630:intron 30.0%
CAACATCACTAAAAACGTAT+AGG - chr5_4:10157871-10157890 None:intergenic 30.0%
!!! CTATACGTTTTTAGTGATGT+TGG + chr5_4:10157869-10157888 Msa0836630:intron 30.0%
!!! GTAGTTTTTTTACTGACACA+AGG + chr5_4:10158099-10158118 Msa0836630:intron 30.0%
AGATGGTATATGAATATCAG+TGG + chr5_4:10158211-10158230 Msa0836630:intron 30.0%
GATGGTATATGAATATCAGT+GGG + chr5_4:10158212-10158231 Msa0836630:intron 30.0%
CAATATTGTACAGTGATGAA+AGG - chr5_4:10158676-10158695 None:intergenic 30.0%
GTTTATAAAATAGCTGCTGA+TGG + chr5_4:10158709-10158728 Msa0836630:intron 30.0%
!!! TGGGATTCAATTTTTTCCTT+TGG + chr5_4:10158729-10158748 Msa0836630:intron 30.0%
! TAGATGTGTTATTGTGAGTT+TGG + chr5_4:10158930-10158949 Msa0836630:intron 30.0%
! AGATGTGTTATTGTGAGTTT+GGG + chr5_4:10158931-10158950 Msa0836630:intron 30.0%
! AGTTTCTAGATTTAACATCG+TGG - chr5_4:10159072-10159091 None:intergenic 30.0%
TCAGTTATTAAGTTCATACC+AGG + chr5_4:10159129-10159148 Msa0836630:intron 30.0%
!!! AAACAGGTTTTTCTAAAACC+TGG - chr5_4:10159150-10159169 None:intergenic 30.0%
TGGTGAATCAGTTTAAAAAC+AGG - chr5_4:10159166-10159185 None:intergenic 30.0%
!!! CAAAACCACCTAGTTTTATA+GGG + chr5_4:10159184-10159203 Msa0836630:intron 30.0%
TTGAATCCAACTCATAATCT+TGG + chr5_4:10159223-10159242 Msa0836630:intron 30.0%
ATCAAACCAAGATTATGAGT+TGG - chr5_4:10159232-10159251 None:intergenic 30.0%
TATGGGATTAGAACTTCAAA+AGG - chr5_4:10159283-10159302 None:intergenic 30.0%
CAGAACATCTTAAGGAATAT+GGG - chr5_4:10159300-10159319 None:intergenic 30.0%
ACAGAACATCTTAAGGAATA+TGG - chr5_4:10159301-10159320 None:intergenic 30.0%
TGAAATGCATATGATCTGTT+TGG - chr5_4:10159454-10159473 None:intergenic 30.0%
TATAACAAGGTTATGACTCA+CGG - chr5_4:10159490-10159509 None:intergenic 30.0%
! TAGAATAACTTTATGGTGGA+AGG - chr5_4:10159530-10159549 None:intergenic 30.0%
! ATTAGGCTTTAGTATGGTTA+TGG - chr5_4:10159778-10159797 None:intergenic 30.0%
! GATACAATTAGGCTTTAGTA+TGG - chr5_4:10159784-10159803 None:intergenic 30.0%
!! TAGGAAACTCATTTTTGACA+TGG - chr5_4:10159825-10159844 None:intergenic 30.0%
ATGAGTTTCCTAAAGTTTCA+TGG + chr5_4:10159833-10159852 Msa0836630:CDS 30.0%
AAAAGCTACCATGAAACTTT+AGG - chr5_4:10159844-10159863 None:intergenic 30.0%
TCATTTCATCTTTCTTTGGT+TGG - chr5_4:10159952-10159971 None:intergenic 30.0%
AAATTCGACACAAACAAAGA+TGG + chr5_4:10159986-10160005 Msa0836630:CDS 30.0%
GAGTTTATGGAAATGTTCAA+TGG + chr5_4:10160133-10160152 Msa0836630:CDS 30.0%
AGGTAGTAAGATAAAAGAAG+AGG + chr5_4:10160159-10160178 Msa0836630:CDS 30.0%
! TTTACAAGGATGATGATGAA+TGG + chr5_4:10160352-10160371 Msa0836630:CDS 30.0%
GTCTCAAATATTCAAGAGGT+TGG + chr5_4:10156412-10156431 Msa0836630:CDS 35.0%
! CCATTTTCTTACAAGCACTA+AGG - chr5_4:10156451-10156470 None:intergenic 35.0%
CCTTAGTGCTTGTAAGAAAA+TGG + chr5_4:10156448-10156467 Msa0836630:CDS 35.0%
GCTTGTAAGAAAATGGTGAA+AGG + chr5_4:10156455-10156474 Msa0836630:CDS 35.0%
!! CAAAGCTTTGAGAGAAAAAC+AGG - chr5_4:10156662-10156681 None:intergenic 35.0%
! ATCTCTAATTGGTGCTTTGA+GGG - chr5_4:10156724-10156743 None:intergenic 35.0%
ACATCAACTACAACTAATCC+TGG + chr5_4:10157400-10157419 Msa0836630:intron 35.0%
! ATTTGATTTCGCTCTTGTTG+CGG + chr5_4:10157655-10157674 Msa0836630:intron 35.0%
CATCGAAATACTCATTCTTC+CGG - chr5_4:10157761-10157780 None:intergenic 35.0%
AATATCACAAAGCCCAAAGA+TGG + chr5_4:10158194-10158213 Msa0836630:intron 35.0%
GAATATCAGTGGGTCAAAAT+TGG + chr5_4:10158222-10158241 Msa0836630:intron 35.0%
! TCAAAATTGGCTTCTTGCAT+AGG + chr5_4:10158235-10158254 Msa0836630:intron 35.0%
! ACTAAAACCTGATTTGTCCA+TGG + chr5_4:10158622-10158641 Msa0836630:intron 35.0%
AAACTCAAATGCAACTCCAA+AGG - chr5_4:10158748-10158767 None:intergenic 35.0%
!! CTTTTAATTGCAGGTTGTGA+AGG + chr5_4:10158768-10158787 Msa0836630:intron 35.0%
ATTGCAAAGGTTGCATCAAA+GGG - chr5_4:10158796-10158815 None:intergenic 35.0%
TATTGCAAAGGTTGCATCAA+AGG - chr5_4:10158797-10158816 None:intergenic 35.0%
AGCAATGAACTGAACATGTA+TGG + chr5_4:10159024-10159043 Msa0836630:intron 35.0%
! CCTATAAAACTAGGTGGTTT+TGG - chr5_4:10159186-10159205 None:intergenic 35.0%
!!! CCAAAACCACCTAGTTTTAT+AGG + chr5_4:10159183-10159202 Msa0836630:intron 35.0%
ATGCATATGATCTGTTTGGA+TGG - chr5_4:10159450-10159469 None:intergenic 35.0%
TGGCAAAGGTGAATATAACA+AGG - chr5_4:10159503-10159522 None:intergenic 35.0%
!! ACTTTATGGTGGAAGGTATT+TGG - chr5_4:10159523-10159542 None:intergenic 35.0%
TTCTAACTTCACCAAATCTG+TGG + chr5_4:10159545-10159564 Msa0836630:intron 35.0%
TTGATAGATAGCCACAGATT+TGG - chr5_4:10159559-10159578 None:intergenic 35.0%
GATTTGTAGAGGAAAAGTAG+TGG - chr5_4:10159680-10159699 None:intergenic 35.0%
! GCTCTAGATATGATTTGTAG+AGG - chr5_4:10159691-10159710 None:intergenic 35.0%
!!! ATATTTTTTCGTGGAGAGGT+TGG - chr5_4:10159875-10159894 None:intergenic 35.0%
!!! AGCTATATTTTTTCGTGGAG+AGG - chr5_4:10159879-10159898 None:intergenic 35.0%
CTTTGGTTGGAAACTCATTT+CGG - chr5_4:10159939-10159958 None:intergenic 35.0%
!! TGATGCAGTGAAAGCATTTA+AGG + chr5_4:10160072-10160091 Msa0836630:CDS 35.0%
ATGGAAATGTTCAATGGAGA+AGG + chr5_4:10156305-10156324 Msa0836630:CDS 35.0%
! CCATTTTCTTACAAGCACTA+AGG - chr5_4:10156451-10156470 None:intergenic 35.0%
CCTTAGTGCTTGTAAGAAAA+TGG + chr5_4:10156448-10156467 Msa0836630:CDS 35.0%
GCTTGTAAGAAAATGGTGAA+AGG + chr5_4:10156455-10156474 Msa0836630:CDS 35.0%
!! AAAATGGTGAAAGGTGTTGA+TGG + chr5_4:10160298-10160317 Msa0836630:CDS 35.0%
GTCTCAAATATTCAAGAGGT+TGG + chr5_4:10156412-10156431 Msa0836630:CDS 35.0%
! CCATTTTCTTACAAGCACTA+AGG - chr5_4:10156451-10156470 None:intergenic 35.0%
CCTTAGTGCTTGTAAGAAAA+TGG + chr5_4:10156448-10156467 Msa0836630:CDS 35.0%
GCTTGTAAGAAAATGGTGAA+AGG + chr5_4:10156455-10156474 Msa0836630:CDS 35.0%
!! CAAAGCTTTGAGAGAAAAAC+AGG - chr5_4:10156662-10156681 None:intergenic 35.0%
! ATCTCTAATTGGTGCTTTGA+GGG - chr5_4:10156724-10156743 None:intergenic 35.0%
ACATCAACTACAACTAATCC+TGG + chr5_4:10157400-10157419 Msa0836630:intron 35.0%
! ATTTGATTTCGCTCTTGTTG+CGG + chr5_4:10157655-10157674 Msa0836630:intron 35.0%
CATCGAAATACTCATTCTTC+CGG - chr5_4:10157761-10157780 None:intergenic 35.0%
AATATCACAAAGCCCAAAGA+TGG + chr5_4:10158194-10158213 Msa0836630:intron 35.0%
GAATATCAGTGGGTCAAAAT+TGG + chr5_4:10158222-10158241 Msa0836630:intron 35.0%
! TCAAAATTGGCTTCTTGCAT+AGG + chr5_4:10158235-10158254 Msa0836630:intron 35.0%
! ACTAAAACCTGATTTGTCCA+TGG + chr5_4:10158622-10158641 Msa0836630:intron 35.0%
AAACTCAAATGCAACTCCAA+AGG - chr5_4:10158748-10158767 None:intergenic 35.0%
!! CTTTTAATTGCAGGTTGTGA+AGG + chr5_4:10158768-10158787 Msa0836630:intron 35.0%
ATTGCAAAGGTTGCATCAAA+GGG - chr5_4:10158796-10158815 None:intergenic 35.0%
TATTGCAAAGGTTGCATCAA+AGG - chr5_4:10158797-10158816 None:intergenic 35.0%
AGCAATGAACTGAACATGTA+TGG + chr5_4:10159024-10159043 Msa0836630:intron 35.0%
! CCTATAAAACTAGGTGGTTT+TGG - chr5_4:10159186-10159205 None:intergenic 35.0%
!!! CCAAAACCACCTAGTTTTAT+AGG + chr5_4:10159183-10159202 Msa0836630:intron 35.0%
ATGCATATGATCTGTTTGGA+TGG - chr5_4:10159450-10159469 None:intergenic 35.0%
TGGCAAAGGTGAATATAACA+AGG - chr5_4:10159503-10159522 None:intergenic 35.0%
!! ACTTTATGGTGGAAGGTATT+TGG - chr5_4:10159523-10159542 None:intergenic 35.0%
TTCTAACTTCACCAAATCTG+TGG + chr5_4:10159545-10159564 Msa0836630:intron 35.0%
TTGATAGATAGCCACAGATT+TGG - chr5_4:10159559-10159578 None:intergenic 35.0%
GATTTGTAGAGGAAAAGTAG+TGG - chr5_4:10159680-10159699 None:intergenic 35.0%
! GCTCTAGATATGATTTGTAG+AGG - chr5_4:10159691-10159710 None:intergenic 35.0%
!!! ATATTTTTTCGTGGAGAGGT+TGG - chr5_4:10159875-10159894 None:intergenic 35.0%
!!! AGCTATATTTTTTCGTGGAG+AGG - chr5_4:10159879-10159898 None:intergenic 35.0%
CTTTGGTTGGAAACTCATTT+CGG - chr5_4:10159939-10159958 None:intergenic 35.0%
!! TGATGCAGTGAAAGCATTTA+AGG + chr5_4:10160072-10160091 Msa0836630:CDS 35.0%
ATGGAAATGTTCAATGGAGA+AGG + chr5_4:10156305-10156324 Msa0836630:CDS 35.0%
! CCATTTTCTTACAAGCACTA+AGG - chr5_4:10156451-10156470 None:intergenic 35.0%
CCTTAGTGCTTGTAAGAAAA+TGG + chr5_4:10156448-10156467 Msa0836630:CDS 35.0%
GCTTGTAAGAAAATGGTGAA+AGG + chr5_4:10156455-10156474 Msa0836630:CDS 35.0%
!! AAAATGGTGAAAGGTGTTGA+TGG + chr5_4:10160298-10160317 Msa0836630:CDS 35.0%
AAAATGGTGAAAGGGGTTGA+TGG + chr5_4:10156464-10156483 Msa0836630:CDS 40.0%
! TCTCTAATTGGTGCTTTGAG+GGG - chr5_4:10156723-10156742 None:intergenic 40.0%
! GATCTCTAATTGGTGCTTTG+AGG - chr5_4:10156725-10156744 None:intergenic 40.0%
TAACTGCATGTAACAGGCTT+AGG + chr5_4:10156919-10156938 Msa0836630:intron 40.0%
TGATGTTCACACACTGAAGA+AGG + chr5_4:10156997-10157016 Msa0836630:intron 40.0%
TTGCCGAGGAATTACAAAAC+CGG - chr5_4:10157105-10157124 None:intergenic 40.0%
TGTTGGACATGAGTGATGTT+GGG + chr5_4:10157817-10157836 Msa0836630:intron 40.0%
GAACATCTGCAGTATTGCAA+AGG - chr5_4:10158809-10158828 None:intergenic 40.0%
TTCCGTGTGCATATAGACAT+TGG + chr5_4:10158826-10158845 Msa0836630:intron 40.0%
CTCCAATGTCTATATGCACA+CGG - chr5_4:10158831-10158850 None:intergenic 40.0%
! TGTGTTATTGTGAGTTTGGG+AGG + chr5_4:10158934-10158953 Msa0836630:intron 40.0%
!!! AACCACCTAGTTTTATAGGG+AGG + chr5_4:10159187-10159206 Msa0836630:intron 40.0%
CTAAGCCTCCCTATAAAACT+AGG - chr5_4:10159195-10159214 None:intergenic 40.0%
TTTATAGGGAGGCTTAGTCA+TGG + chr5_4:10159198-10159217 Msa0836630:intron 40.0%
GCAGGCATACTAAAACGTTT+GGG - chr5_4:10159339-10159358 None:intergenic 40.0%
TGCAGGCATACTAAAACGTT+TGG - chr5_4:10159340-10159359 None:intergenic 40.0%
! ATACGCGTGCTTTATTGTTG+TGG - chr5_4:10159602-10159621 None:intergenic 40.0%
TTTCATACGTCTCCTACTCT+TGG - chr5_4:10159717-10159736 None:intergenic 40.0%
! CAAAGATGGCAAGATTAGTC+TGG + chr5_4:10160000-10160019 Msa0836630:CDS 40.0%
TAAAGCAGCTGCAAAAGCTT+TGG + chr5_4:10160030-10160049 Msa0836630:CDS 40.0%
!! AGCTGCAAAAGCTTTGGATA+AGG + chr5_4:10160036-10160055 Msa0836630:CDS 40.0%
!! GCTGCAAAAGCTTTGGATAA+GGG + chr5_4:10160037-10160056 Msa0836630:CDS 40.0%
!! CTGCAAAAGCTTTGGATAAG+GGG + chr5_4:10160038-10160057 Msa0836630:CDS 40.0%
!! AAAGCTTTGGATAAGGGGAT+TGG + chr5_4:10160043-10160062 Msa0836630:CDS 40.0%
!! AAGCTTTGGATAAGGGGATT+GGG + chr5_4:10160044-10160063 Msa0836630:CDS 40.0%
!! AGTGAAAGCATTTAAGGCCA+TGG + chr5_4:10160078-10160097 Msa0836630:CDS 40.0%
AAAATGGTGAAAGGGGTTGA+TGG + chr5_4:10156464-10156483 Msa0836630:CDS 40.0%
! TCTCTAATTGGTGCTTTGAG+GGG - chr5_4:10156723-10156742 None:intergenic 40.0%
! GATCTCTAATTGGTGCTTTG+AGG - chr5_4:10156725-10156744 None:intergenic 40.0%
TAACTGCATGTAACAGGCTT+AGG + chr5_4:10156919-10156938 Msa0836630:intron 40.0%
TGATGTTCACACACTGAAGA+AGG + chr5_4:10156997-10157016 Msa0836630:intron 40.0%
TTGCCGAGGAATTACAAAAC+CGG - chr5_4:10157105-10157124 None:intergenic 40.0%
TGTTGGACATGAGTGATGTT+GGG + chr5_4:10157817-10157836 Msa0836630:intron 40.0%
GAACATCTGCAGTATTGCAA+AGG - chr5_4:10158809-10158828 None:intergenic 40.0%
TTCCGTGTGCATATAGACAT+TGG + chr5_4:10158826-10158845 Msa0836630:intron 40.0%
CTCCAATGTCTATATGCACA+CGG - chr5_4:10158831-10158850 None:intergenic 40.0%
! TGTGTTATTGTGAGTTTGGG+AGG + chr5_4:10158934-10158953 Msa0836630:intron 40.0%
!!! AACCACCTAGTTTTATAGGG+AGG + chr5_4:10159187-10159206 Msa0836630:intron 40.0%
CTAAGCCTCCCTATAAAACT+AGG - chr5_4:10159195-10159214 None:intergenic 40.0%
TTTATAGGGAGGCTTAGTCA+TGG + chr5_4:10159198-10159217 Msa0836630:intron 40.0%
GCAGGCATACTAAAACGTTT+GGG - chr5_4:10159339-10159358 None:intergenic 40.0%
TGCAGGCATACTAAAACGTT+TGG - chr5_4:10159340-10159359 None:intergenic 40.0%
! ATACGCGTGCTTTATTGTTG+TGG - chr5_4:10159602-10159621 None:intergenic 40.0%
TTTCATACGTCTCCTACTCT+TGG - chr5_4:10159717-10159736 None:intergenic 40.0%
! CAAAGATGGCAAGATTAGTC+TGG + chr5_4:10160000-10160019 Msa0836630:CDS 40.0%
TAAAGCAGCTGCAAAAGCTT+TGG + chr5_4:10160030-10160049 Msa0836630:CDS 40.0%
!! AGCTGCAAAAGCTTTGGATA+AGG + chr5_4:10160036-10160055 Msa0836630:CDS 40.0%
!! GCTGCAAAAGCTTTGGATAA+GGG + chr5_4:10160037-10160056 Msa0836630:CDS 40.0%
!! CTGCAAAAGCTTTGGATAAG+GGG + chr5_4:10160038-10160057 Msa0836630:CDS 40.0%
!! AAAGCTTTGGATAAGGGGAT+TGG + chr5_4:10160043-10160062 Msa0836630:CDS 40.0%
!! AAGCTTTGGATAAGGGGATT+GGG + chr5_4:10160044-10160063 Msa0836630:CDS 40.0%
!! AGTGAAAGCATTTAAGGCCA+TGG + chr5_4:10160078-10160097 Msa0836630:CDS 40.0%
TGATGGGGAAATTAGTGCTG+AGG + chr5_4:10156385-10156404 Msa0836630:CDS 45.0%
!! GCCGTCGGATACTTTTTACA+CGG + chr5_4:10157066-10157085 Msa0836630:intron 45.0%
!! GCCGTGTAAAAAGTATCCGA+CGG - chr5_4:10157070-10157089 None:intergenic 45.0%
!!! CTGCCGGTTTTGTAATTCCT+CGG + chr5_4:10157099-10157118 Msa0836630:intron 45.0%
!! AGATAGCTCCAGTATTGACC+AGG - chr5_4:10157467-10157486 None:intergenic 45.0%
AAGACCGCATACAACTGCTT+AGG + chr5_4:10157504-10157523 Msa0836630:intron 45.0%
AGACCGCATACAACTGCTTA+GGG + chr5_4:10157505-10157524 Msa0836630:intron 45.0%
CTGTTGGACATGAGTGATGT+TGG + chr5_4:10157816-10157835 Msa0836630:intron 45.0%
AGCCTCCCTATAAAACTAGG+TGG - chr5_4:10159192-10159211 None:intergenic 45.0%
!! CAACTCAGGTGCTGAATACA+CGG + chr5_4:10159396-10159415 Msa0836630:intron 45.0%
!! TGGTGGAAGGTATTTGGCAA+AGG - chr5_4:10159517-10159536 None:intergenic 45.0%
! ATCTAGAGCCTTCCAAGAGT+AGG + chr5_4:10159702-10159721 Msa0836630:intron 45.0%
ATACGTCTCCTACTCTTGGA+AGG - chr5_4:10159713-10159732 None:intergenic 45.0%
!! AGCTTTGGATAAGGGGATTG+GGG + chr5_4:10160045-10160064 Msa0836630:CDS 45.0%
TGATGGGAAAATCAGTGCTG+AGG + chr5_4:10160219-10160238 Msa0836630:CDS 45.0%
!! GTGAAAGGTGTTGATGGTGA+TGG + chr5_4:10160304-10160323 Msa0836630:CDS 45.0%
TGATGGGGAAATTAGTGCTG+AGG + chr5_4:10156385-10156404 Msa0836630:CDS 45.0%
!! GCCGTCGGATACTTTTTACA+CGG + chr5_4:10157066-10157085 Msa0836630:intron 45.0%
!! GCCGTGTAAAAAGTATCCGA+CGG - chr5_4:10157070-10157089 None:intergenic 45.0%
!!! CTGCCGGTTTTGTAATTCCT+CGG + chr5_4:10157099-10157118 Msa0836630:intron 45.0%
!! AGATAGCTCCAGTATTGACC+AGG - chr5_4:10157467-10157486 None:intergenic 45.0%
AAGACCGCATACAACTGCTT+AGG + chr5_4:10157504-10157523 Msa0836630:intron 45.0%
AGACCGCATACAACTGCTTA+GGG + chr5_4:10157505-10157524 Msa0836630:intron 45.0%
CTGTTGGACATGAGTGATGT+TGG + chr5_4:10157816-10157835 Msa0836630:intron 45.0%
AGCCTCCCTATAAAACTAGG+TGG - chr5_4:10159192-10159211 None:intergenic 45.0%
!! CAACTCAGGTGCTGAATACA+CGG + chr5_4:10159396-10159415 Msa0836630:intron 45.0%
!! TGGTGGAAGGTATTTGGCAA+AGG - chr5_4:10159517-10159536 None:intergenic 45.0%
! ATCTAGAGCCTTCCAAGAGT+AGG + chr5_4:10159702-10159721 Msa0836630:intron 45.0%
ATACGTCTCCTACTCTTGGA+AGG - chr5_4:10159713-10159732 None:intergenic 45.0%
!! AGCTTTGGATAAGGGGATTG+GGG + chr5_4:10160045-10160064 Msa0836630:CDS 45.0%
TGATGGGAAAATCAGTGCTG+AGG + chr5_4:10160219-10160238 Msa0836630:CDS 45.0%
!! GTGAAAGGTGTTGATGGTGA+TGG + chr5_4:10160304-10160323 Msa0836630:CDS 45.0%
!! GTGAAAGGGGTTGATGGTGA+TGG + chr5_4:10156470-10156489 Msa0836630:CDS 50.0%
! GCATCGACAGTTAATTGCCG+AGG - chr5_4:10157119-10157138 None:intergenic 50.0%
TGAAGCTTCTGCCAATGCAG+AGG - chr5_4:10157151-10157170 None:intergenic 50.0%
ACAACAGCTGGAGCAAGACT+AGG - chr5_4:10157427-10157446 None:intergenic 50.0%
!! TAGCTCCAGTATTGACCAGG+AGG - chr5_4:10157464-10157483 None:intergenic 50.0%
ATGCGGTCTTGCACCATGTT+CGG - chr5_4:10157494-10157513 None:intergenic 50.0%
GAGCCCTAAGCAGTTGTATG+CGG - chr5_4:10157511-10157530 None:intergenic 50.0%
CTCTTGTTGCGGTGTTCGTT+TGG + chr5_4:10157666-10157685 Msa0836630:intron 50.0%
!! TTTTCGTGGAGAGGTTGGCT+TGG - chr5_4:10159870-10159889 None:intergenic 50.0%
GCCATGGACTCTGACAAAGA+TGG + chr5_4:10160094-10160113 Msa0836630:CDS 50.0%
GCCATCTTTGTCAGAGTCCA+TGG - chr5_4:10160098-10160117 None:intergenic 50.0%
!! GGTGTTGATGGTGATGGAGA+TGG + chr5_4:10160310-10160329 Msa0836630:CDS 50.0%
!! GTGAAAGGGGTTGATGGTGA+TGG + chr5_4:10156470-10156489 Msa0836630:CDS 50.0%
! GCATCGACAGTTAATTGCCG+AGG - chr5_4:10157119-10157138 None:intergenic 50.0%
TGAAGCTTCTGCCAATGCAG+AGG - chr5_4:10157151-10157170 None:intergenic 50.0%
ACAACAGCTGGAGCAAGACT+AGG - chr5_4:10157427-10157446 None:intergenic 50.0%
!! TAGCTCCAGTATTGACCAGG+AGG - chr5_4:10157464-10157483 None:intergenic 50.0%
ATGCGGTCTTGCACCATGTT+CGG - chr5_4:10157494-10157513 None:intergenic 50.0%
GAGCCCTAAGCAGTTGTATG+CGG - chr5_4:10157511-10157530 None:intergenic 50.0%
CTCTTGTTGCGGTGTTCGTT+TGG + chr5_4:10157666-10157685 Msa0836630:intron 50.0%
!! TTTTCGTGGAGAGGTTGGCT+TGG - chr5_4:10159870-10159889 None:intergenic 50.0%
GCCATGGACTCTGACAAAGA+TGG + chr5_4:10160094-10160113 Msa0836630:CDS 50.0%
GCCATCTTTGTCAGAGTCCA+TGG - chr5_4:10160098-10160117 None:intergenic 50.0%
!! GGTGTTGATGGTGATGGAGA+TGG + chr5_4:10160310-10160329 Msa0836630:CDS 50.0%
!! GGGGTTGATGGTGATGGAGA+TGG + chr5_4:10156476-10156495 Msa0836630:CDS 55.0%
CTTCGGCAGTTAACTGCCGT+CGG + chr5_4:10157051-10157070 Msa0836630:intron 55.0%
ACACGGCAGTTAGTTGCTGC+CGG + chr5_4:10157083-10157102 Msa0836630:intron 55.0%
!! CTGCCAATGCAGAGGCATCA+GGG - chr5_4:10157143-10157162 None:intergenic 55.0%
!! TCTGCCAATGCAGAGGCATC+AGG - chr5_4:10157144-10157163 None:intergenic 55.0%
!! CAGTATTGACCAGGAGGCGT+CGG - chr5_4:10157458-10157477 None:intergenic 55.0%
GAGCTATCTGCTCCCGAACA+TGG + chr5_4:10157478-10157497 Msa0836630:intron 55.0%
TGCGGTCTTGCACCATGTTC+GGG - chr5_4:10157493-10157512 None:intergenic 55.0%
!! TGGCATCGACGTTGCAGATC+CGG + chr5_4:10157739-10157758 Msa0836630:intron 55.0%
TCACGCGCCATGGACAAATC+AGG - chr5_4:10158632-10158651 None:intergenic 55.0%
TTTGTCCATGGCGCGTGAAG+AGG + chr5_4:10158634-10158653 Msa0836630:intron 55.0%
TTGTCCATGGCGCGTGAAGA+GGG + chr5_4:10158635-10158654 Msa0836630:intron 55.0%
!! GGGGTTGATGGTGATGGAGA+TGG + chr5_4:10156476-10156495 Msa0836630:CDS 55.0%
CTTCGGCAGTTAACTGCCGT+CGG + chr5_4:10157051-10157070 Msa0836630:intron 55.0%
ACACGGCAGTTAGTTGCTGC+CGG + chr5_4:10157083-10157102 Msa0836630:intron 55.0%
!! CTGCCAATGCAGAGGCATCA+GGG - chr5_4:10157143-10157162 None:intergenic 55.0%
!! TCTGCCAATGCAGAGGCATC+AGG - chr5_4:10157144-10157163 None:intergenic 55.0%
!! CAGTATTGACCAGGAGGCGT+CGG - chr5_4:10157458-10157477 None:intergenic 55.0%
GAGCTATCTGCTCCCGAACA+TGG + chr5_4:10157478-10157497 Msa0836630:intron 55.0%
TGCGGTCTTGCACCATGTTC+GGG - chr5_4:10157493-10157512 None:intergenic 55.0%
!! TGGCATCGACGTTGCAGATC+CGG + chr5_4:10157739-10157758 Msa0836630:intron 55.0%
TCACGCGCCATGGACAAATC+AGG - chr5_4:10158632-10158651 None:intergenic 55.0%
TTTGTCCATGGCGCGTGAAG+AGG + chr5_4:10158634-10158653 Msa0836630:intron 55.0%
TTGTCCATGGCGCGTGAAGA+GGG + chr5_4:10158635-10158654 Msa0836630:intron 55.0%
GCTGGAGCAAGACTAGGACC+AGG - chr5_4:10157421-10157440 None:intergenic 60.0%
TCGGAGGCAGCAACAACAGC+TGG - chr5_4:10157439-10157458 None:intergenic 60.0%
!! TATTGACCAGGAGGCGTCGG+AGG - chr5_4:10157455-10157474 None:intergenic 60.0%
CGACGCCTCCTGGTCAATAC+TGG + chr5_4:10157456-10157475 Msa0836630:intron 60.0%
TGTCCATGGCGCGTGAAGAG+GGG + chr5_4:10158636-10158655 Msa0836630:intron 60.0%
ATTCCCCTCTTCACGCGCCA+TGG - chr5_4:10158642-10158661 None:intergenic 60.0%
GCTGGAGCAAGACTAGGACC+AGG - chr5_4:10157421-10157440 None:intergenic 60.0%
TCGGAGGCAGCAACAACAGC+TGG - chr5_4:10157439-10157458 None:intergenic 60.0%
!! TATTGACCAGGAGGCGTCGG+AGG - chr5_4:10157455-10157474 None:intergenic 60.0%
CGACGCCTCCTGGTCAATAC+TGG + chr5_4:10157456-10157475 Msa0836630:intron 60.0%
TGTCCATGGCGCGTGAAGAG+GGG + chr5_4:10158636-10158655 Msa0836630:intron 60.0%
ATTCCCCTCTTCACGCGCCA+TGG - chr5_4:10158642-10158661 None:intergenic 60.0%
GCGCCCTGATGCCTCTGCAT+TGG + chr5_4:10157137-10157156 Msa0836630:intron 65.0%
GCGCCCTGATGCCTCTGCAT+TGG + chr5_4:10157137-10157156 Msa0836630:intron 65.0%
TTGCTGCCTCCGACGCCTCC+TGG + chr5_4:10157446-10157465 Msa0836630:intron 70.0%
TTGCTGCCTCCGACGCCTCC+TGG + chr5_4:10157446-10157465 Msa0836630:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 10156305 10160390 10156305 ID=Msa0836630;Name=Msa0836630
chr5_4 mRNA 10156305 10160390 10156305 ID=Msa0836630-mRNA-1;Parent=Msa0836630;Name=Msa0836630-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0|0|2|0|270
chr5_4 exon 10156305 10156547 10156305 ID=Msa0836630-mRNA-1:exon:4500;Parent=Msa0836630-mRNA-1
chr5_4 exon 10159821 10160390 10159821 ID=Msa0836630-mRNA-1:exon:4501;Parent=Msa0836630-mRNA-1
chr5_4 CDS 10156305 10156547 10156305 ID=Msa0836630-mRNA-1:cds;Parent=Msa0836630-mRNA-1
chr5_4 CDS 10159821 10160390 10159821 ID=Msa0836630-mRNA-1:cds;Parent=Msa0836630-mRNA-1
Gene Sequence

>Msa0836630

ATGGAAATGTTCAATGGAGAATGTAGTGAGATAAAAGAAGAGGAGATTAAGAGTGCTTTTCAAGTATTTGATATAAATGGTGATGGGGAAATTAGTGCTGAGGAATTGTCTCAAATATTCAAGAGGTTGGGAGAGAGTTGCAGCCTTAGTGCTTGTAAGAAAATGGTGAAAGGGGTTGATGGTGATGGAGATGGTCTTATAGATTTGAATGAGTTTACAAGGATGATGATGAGTAGCAAGAAAACCATGTCAAAAATGAGTTTCCTAAAGTTTCATGGTAGCTTTTCAGCCAAGCCAACCTCTCCACGAAAAAATATAGCTCAAAAGAACAGCTTCAAGTCGAGACAAACATCGAGTGCCGAAATGAGTTTCCAACCAAAGAAAGATGAAATGAAATGGGTGTTCGAGAAATTCGACACAAACAAAGATGGCAAGATTAGTCTGGAAGAGTATAAAGCAGCTGCAAAAGCTTTGGATAAGGGGATTGGGGATACTGATGCAGTGAAAGCATTTAAGGCCATGGACTCTGACAAAGATGGCTTCATAGACTTTAAAGAGTTTATGGAAATGTTCAATGGAGAAGGTAGTAAGATAAAAGAAGAGGAGATTAAGAGTGCTTTTCAAGTATTTGATATAAATGGTGATGGGAAAATCAGTGCTGAGGAATTGTCTCAAATATTTAAGAGGTTAGGAGAGAGTTGTAGCCTTAGTGCTTGTAAGAAAATGGTGAAAGGTGTTGATGGTGATGGAGATGGTCTTATAGATTTGAATGAGTTTACAAGGATGATGATGAATGGCAAGAAATGTGCCTAA
Protein sequence

>Msa0836630

MEMFNGECSEIKEEEIKSAFQVFDINGDGEISAEELSQIFKRLGESCSLSACKKMVKGVDGDGDGLIDLNEFTRMMMSSKKTMSKMSFLKFHGSFSAKPTSPRKNIAQKNSFKSRQTSSAEMSFQPKKDEMKWVFEKFDTNKDGKISLEEYKAAAKALDKGIGDTDAVKAFKAMDSDKDGFIDFKEFMEMFNGEGSKIKEEEIKSAFQVFDINGDGKISAEELSQIFKRLGESCSLSACKKMVKGVDGDGDGLIDLNEFTRMMMNGKKCA*