Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630660 | XP_039689897.1 | 95.000 | 520 | 26 | 0 | 1 | 520 | 324 | 843 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630660 | sp|A0A0P0VUY4|CMT1_ORYSJ | 60.392 | 510 | 186 | 6 | 1 | 503 | 531 | 1031 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630660 | A0A072UIN2 | 95.000 | 520 | 26 | 0 | 1 | 520 | 324 | 843 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0630660 | 0.820147 | 7.995671e-53 | -8.615850e-47 |
| Msa0016040 | Msa0630660 | 0.843991 | 9.965676e-59 | -8.615850e-47 |
| Msa0019930 | Msa0630660 | 0.815183 | 1.053154e-51 | -8.615850e-47 |
| Msa0025580 | Msa0630660 | 0.829795 | 4.213925e-55 | -8.615850e-47 |
| Msa0027280 | Msa0630660 | 0.806998 | 6.263492e-50 | -8.615850e-47 |
| Msa0032980 | Msa0630660 | 0.831415 | 1.690783e-55 | -8.615850e-47 |
| Msa0035340 | Msa0630660 | 0.800755 | 1.241966e-48 | -8.615850e-47 |
| Msa0035380 | Msa0630660 | 0.811772 | 5.921754e-51 | -8.615850e-47 |
| Msa0037740 | Msa0630660 | 0.821585 | 3.732929e-53 | -8.615850e-47 |
| Msa0053070 | Msa0630660 | 0.859541 | 3.852373e-63 | -8.615850e-47 |
| Msa0056180 | Msa0630660 | 0.813276 | 2.778589e-51 | -8.615850e-47 |
| Msa0062340 | Msa0630660 | 0.811376 | 7.221742e-51 | -8.615850e-47 |
| Msa0067060 | Msa0630660 | 0.815138 | 1.077819e-51 | -8.615850e-47 |
| Msa0067380 | Msa0630660 | 0.826342 | 2.859213e-54 | -8.615850e-47 |
| Msa0073120 | Msa0630660 | 0.840561 | 8.076053e-58 | -8.615850e-47 |
| Msa0075530 | Msa0630660 | 0.803527 | 3.341665e-49 | -8.615850e-47 |
| Msa0091350 | Msa0630660 | 0.832305 | 1.020064e-55 | -8.615850e-47 |
| Msa0091360 | Msa0630660 | 0.809197 | 2.130856e-50 | -8.615850e-47 |
| Msa0093860 | Msa0630660 | 0.834774 | 2.467343e-56 | -8.615850e-47 |
| Msa0098410 | Msa0630660 | 0.845899 | 3.045274e-59 | -8.615850e-47 |
| Msa0103200 | Msa0630660 | 0.803671 | 3.118756e-49 | -8.615850e-47 |
| Msa0106630 | Msa0630660 | 0.805701 | 1.175468e-49 | -8.615850e-47 |
| Msa0110200 | Msa0630660 | 0.819695 | 1.014756e-52 | -8.615850e-47 |
| Msa0115550 | Msa0630660 | 0.844884 | 5.731801e-59 | -8.615850e-47 |
| Msa0606100 | Msa0630660 | 0.851772 | 7.138250e-61 | -8.615850e-47 |
| Msa0607800 | Msa0630660 | 0.835744 | 1.404369e-56 | -8.615850e-47 |
| Msa0613580 | Msa0630660 | 0.803283 | 3.753665e-49 | -8.615850e-47 |
| Msa0613630 | Msa0630660 | 0.825186 | 5.375940e-54 | -8.615850e-47 |
| Msa0615630 | Msa0630660 | 0.819057 | 1.418516e-52 | -8.615850e-47 |
| Msa0620500 | Msa0630660 | 0.845927 | 2.991604e-59 | -8.615850e-47 |
| Msa0621710 | Msa0630660 | 0.835506 | 1.612841e-56 | -8.615850e-47 |
| Msa0622920 | Msa0630660 | 0.825138 | 5.519014e-54 | -8.615850e-47 |
| Msa0625620 | Msa0630660 | 0.851000 | 1.179952e-60 | -8.615850e-47 |
| Msa0630660 | Msa0645340 | 0.814190 | 1.747879e-51 | -8.615850e-47 |
| Msa0630660 | Msa0647050 | 0.869823 | 2.320000e-66 | -8.615850e-47 |
| Msa0630660 | Msa0647440 | 0.803231 | 3.847973e-49 | -8.615850e-47 |
| Msa0630660 | Msa0648040 | 0.829601 | 4.699076e-55 | -8.615850e-47 |
| Msa0630660 | Msa0648760 | 0.819178 | 1.331176e-52 | -8.615850e-47 |
| Msa0630660 | Msa0654740 | 0.806863 | 6.691462e-50 | -8.615850e-47 |
| Msa0630660 | Msa0656400 | 0.800034 | 1.741636e-48 | -8.615850e-47 |
| Msa0630660 | Msa0658640 | 0.802099 | 6.589489e-49 | -8.615850e-47 |
| Msa0630660 | Msa0659150 | 0.811734 | 6.037993e-51 | -8.615850e-47 |
| Msa0630660 | Msa0666700 | 0.805013 | 1.638453e-49 | -8.615850e-47 |
| Msa0630660 | Msa0668900 | 0.938404 | 7.114111e-99 | -8.615850e-47 |
| Msa0630660 | Msa0687090 | 0.829050 | 6.392624e-55 | -8.615850e-47 |
| Msa0630660 | Msa0690320 | 0.808034 | 3.775635e-50 | -8.615850e-47 |
| Msa0630660 | Msa0690740 | 0.833558 | 4.977982e-56 | -8.615850e-47 |
| Msa0630660 | Msa0691270 | 0.813495 | 2.486626e-51 | -8.615850e-47 |
| Msa0630660 | Msa0698730 | 0.824549 | 7.601546e-54 | -8.615850e-47 |
| Msa0630660 | Msa0700210 | 0.809789 | 1.590707e-50 | -8.615850e-47 |
| Msa0630660 | Msa0703600 | 0.829589 | 4.729534e-55 | -8.615850e-47 |
| Msa0630660 | Msa0709200 | 0.830717 | 2.509872e-55 | -8.615850e-47 |
| Msa0630660 | Msa0709440 | 0.824797 | 6.642185e-54 | -8.615850e-47 |
| Msa0630660 | Msa0711010 | 0.802406 | 5.695537e-49 | -8.615850e-47 |
| Msa0630660 | Msa0713960 | 0.803470 | 3.432378e-49 | -8.615850e-47 |
| Msa0630660 | Msa0714520 | 0.842133 | 3.114433e-58 | -8.615850e-47 |
| Msa0630660 | Msa0716480 | 0.808142 | 3.581418e-50 | -8.615850e-47 |
| Msa0630660 | Msa0717830 | 0.805632 | 1.215361e-49 | -8.615850e-47 |
| Msa0630660 | Msa0717900 | 0.822065 | 2.890958e-53 | -8.615850e-47 |
| Msa0630660 | Msa0722220 | 0.802910 | 4.483332e-49 | -8.615850e-47 |
| Msa0630660 | Msa0735780 | 0.826609 | 2.469782e-54 | -8.615850e-47 |
| Msa0630660 | Msa0736890 | 0.808601 | 2.858903e-50 | -8.615850e-47 |
| Msa0630660 | Msa0740710 | 0.837417 | 5.263296e-57 | -8.615850e-47 |
| Msa0630660 | Msa0743440 | 0.821220 | 4.533668e-53 | -8.615850e-47 |
| Msa0630660 | Msa0747000 | 0.807802 | 4.231068e-50 | -8.615850e-47 |
| Msa0630660 | Msa0747740 | 0.859342 | 4.419241e-63 | -8.615850e-47 |
| Msa0630660 | Msa0758590 | 0.818737 | 1.676616e-52 | -8.615850e-47 |
| Msa0630660 | Msa0758650 | 0.813923 | 2.001444e-51 | -8.615850e-47 |
| Msa0630660 | Msa0773630 | 0.841000 | 6.192886e-58 | -8.615850e-47 |
| Msa0630660 | Msa0780910 | 0.846545 | 2.031360e-59 | -8.615850e-47 |
| Msa0630660 | Msa0800660 | 0.832709 | 8.098530e-56 | -8.615850e-47 |
| Msa0630660 | Msa0805680 | 0.805798 | 1.121859e-49 | -8.615850e-47 |
| Msa0630660 | Msa0811020 | 0.831360 | 1.744708e-55 | -8.615850e-47 |
| Msa0630660 | Msa0816080 | 0.815296 | 9.941234e-52 | -8.615850e-47 |
| Msa0630660 | Msa0818880 | 0.813412 | 2.593831e-51 | -8.615850e-47 |
| Msa0630660 | Msa0821160 | 0.834577 | 2.765595e-56 | -8.615850e-47 |
| Msa0630660 | Msa0835350 | 0.832391 | 9.712117e-56 | -8.615850e-47 |
| Msa0630660 | Msa0837460 | 0.818363 | 2.038055e-52 | -8.615850e-47 |
| Msa0630660 | Msa0838240 | 0.800867 | 1.178051e-48 | -8.615850e-47 |
| Msa0630660 | Msa0851300 | 0.800051 | 1.727800e-48 | -8.615850e-47 |
| Msa0630660 | Msa0863620 | 0.820751 | 5.811871e-53 | -8.615850e-47 |
| Msa0630660 | Msa0879920 | 0.801633 | 8.211413e-49 | -8.615850e-47 |
| Msa0630660 | Msa0888790 | 0.805938 | 1.048130e-49 | -8.615850e-47 |
| Msa0630660 | Msa0900090 | 0.812680 | 3.753921e-51 | -8.615850e-47 |
| Msa0630660 | Msa0900760 | 0.817164 | 3.800401e-52 | -8.615850e-47 |
| Msa0630660 | Msa0909760 | 0.864777 | 9.527836e-65 | -8.615850e-47 |
| Msa0630660 | Msa0924430 | 0.804356 | 2.246695e-49 | -8.615850e-47 |
| Msa0630660 | Msa0931590 | 0.836744 | 7.818927e-57 | -8.615850e-47 |
| Msa0630660 | Msa0932960 | 0.805619 | 1.223378e-49 | -8.615850e-47 |
| Msa0630660 | Msa0966480 | 0.810277 | 1.248645e-50 | -8.615850e-47 |
| Msa0630660 | Msa1002640 | 0.821871 | 3.206757e-53 | -8.615850e-47 |
| Msa0630660 | Msa1008670 | 0.837676 | 4.516808e-57 | -8.615850e-47 |
| Msa0630660 | Msa1008680 | 0.829886 | 4.004518e-55 | -8.615850e-47 |
| Msa0630660 | Msa1033920 | 0.837822 | 4.142311e-57 | -8.615850e-47 |
| Msa0630660 | Msa1035570 | 0.821605 | 3.694449e-53 | -8.615850e-47 |
| Msa0630660 | Msa1035610 | 0.821945 | 3.082648e-53 | -8.615850e-47 |
| Msa0630660 | Msa1035650 | 0.831571 | 1.547814e-55 | -8.615850e-47 |
| Msa0630660 | Msa1042880 | 0.814658 | 1.377480e-51 | -8.615850e-47 |
| Msa0630660 | Msa1056830 | 0.809376 | 1.951437e-50 | -8.615850e-47 |
| Msa0630660 | Msa1059020 | 0.807139 | 5.849919e-50 | -8.615850e-47 |
| Msa0630660 | Msa1060900 | 0.820333 | 7.251609e-53 | -8.615850e-47 |
| Msa0630660 | Msa1076020 | 0.832755 | 7.888590e-56 | -8.615850e-47 |
| Msa0630660 | Msa1078880 | 0.833895 | 4.101344e-56 | -8.615850e-47 |
| Msa0630660 | Msa1078970 | 0.829900 | 3.972671e-55 | -8.615850e-47 |
| Msa0630660 | Msa1081390 | 0.806752 | 7.060868e-50 | -8.615850e-47 |
| Msa0630660 | Msa1082380 | 0.824350 | 8.463599e-54 | -8.615850e-47 |
| Msa0630660 | Msa1084530 | 0.830751 | 2.461092e-55 | -8.615850e-47 |
| Msa0630660 | Msa1116190 | 0.812492 | 4.125109e-51 | -8.615850e-47 |
| Msa0630660 | Msa1116220 | 0.815686 | 8.138946e-52 | -8.615850e-47 |
| Msa0630660 | Msa1116660 | 0.835647 | 1.485448e-56 | -8.615850e-47 |
| Msa0630660 | Msa1116740 | 0.813165 | 2.938944e-51 | -8.615850e-47 |
| Msa0630660 | Msa1125820 | 0.829913 | 3.944739e-55 | -8.615850e-47 |
| Msa0630660 | Msa1125990 | 0.828339 | 9.497665e-55 | -8.615850e-47 |
| Msa0630660 | Msa1127280 | 0.820368 | 7.117932e-53 | -8.615850e-47 |
| Msa0630660 | Msa1132530 | 0.852778 | 3.691198e-61 | -8.615850e-47 |
| Msa0630660 | Msa1139050 | 0.829767 | 4.280690e-55 | -8.615850e-47 |
| Msa0630660 | Msa1148630 | 0.814993 | 1.160654e-51 | -8.615850e-47 |
| Msa0630660 | Msa1149450 | 0.830874 | 2.296105e-55 | -8.615850e-47 |
| Msa0630660 | Msa1162880 | 0.852041 | 5.986597e-61 | -8.615850e-47 |
| Msa0630660 | Msa1163180 | 0.816675 | 4.893455e-52 | -8.615850e-47 |
| Msa0630660 | Msa1165480 | 0.818696 | 1.713413e-52 | -8.615850e-47 |
| Msa0630660 | Msa1169190 | 0.832536 | 8.939777e-56 | -8.615850e-47 |
| Msa0630660 | Msa1171070 | 0.800412 | 1.459120e-48 | -8.615850e-47 |
| Msa0630660 | Msa1171290 | 0.816848 | 4.474844e-52 | -8.615850e-47 |
| Msa0630660 | Msa1190390 | 0.844685 | 6.485692e-59 | -8.615850e-47 |
| Msa0630660 | Msa1213830 | 0.834761 | 2.485960e-56 | -8.615850e-47 |
| Msa0630660 | Msa1214350 | 0.867441 | 1.365753e-65 | -8.615850e-47 |
| Msa0630660 | Msa1215980 | 0.845933 | 2.981006e-59 | -8.615850e-47 |
| Msa0630660 | Msa1218820 | 0.838336 | 3.054722e-57 | -8.615850e-47 |
| Msa0630660 | Msa1226520 | 0.803731 | 3.030896e-49 | -8.615850e-47 |
| Msa0630660 | Msa1244240 | 0.836517 | 8.936334e-57 | -8.615850e-47 |
| Msa0630660 | Msa1254420 | 0.804886 | 1.741867e-49 | -8.615850e-47 |
| Msa0630660 | Msa1254540 | 0.851381 | 9.212199e-61 | -8.615850e-47 |
| Msa0630660 | Msa1260710 | 0.846759 | 1.775263e-59 | -8.615850e-47 |
| Msa0630660 | Msa1261050 | 0.827548 | 1.472313e-54 | -8.615850e-47 |
| Msa0630660 | Msa1263740 | 0.840393 | 8.935396e-58 | -8.615850e-47 |
| Msa0630660 | Msa1263780 | 0.855794 | 4.966002e-62 | -8.615850e-47 |
| Msa0630660 | Msa1263900 | 0.830602 | 2.677055e-55 | -8.615850e-47 |
| Msa0630660 | Msa1268630 | 0.805433 | 1.337975e-49 | -8.615850e-47 |
| Msa0630660 | Msa1294460 | 0.816267 | 6.040558e-52 | -8.615850e-47 |
| Msa0630660 | Msa1294790 | 0.819511 | 1.117641e-52 | -8.615850e-47 |
| Msa0630660 | Msa1300460 | 0.835767 | 1.385251e-56 | -8.615850e-47 |
| Msa0630660 | Msa1301820 | 0.804905 | 1.726110e-49 | -8.615850e-47 |
| Msa0630660 | Msa1305780 | 0.822542 | 2.240945e-53 | -8.615850e-47 |
| Msa0630660 | Msa1306570 | 0.817623 | 2.996159e-52 | -8.615850e-47 |
| Msa0630660 | Msa1306790 | 0.835296 | 1.821998e-56 | -8.615850e-47 |
| Msa0630660 | Msa1321530 | 0.807457 | 5.008298e-50 | -8.615850e-47 |
| Msa0630660 | Msa1332950 | 0.815201 | 1.043644e-51 | -8.615850e-47 |
| Msa0630660 | Msa1339170 | 0.845556 | 3.773571e-59 | -8.615850e-47 |
| Msa0630660 | Msa1342810 | 0.804693 | 1.911489e-49 | -8.615850e-47 |
| Msa0630660 | Msa1343170 | 0.806073 | 9.818208e-50 | -8.615850e-47 |
| Msa0630660 | Msa1343180 | 0.821968 | 3.045515e-53 | -8.615850e-47 |
| Msa0630660 | Msa1359980 | 0.845617 | 3.632276e-59 | -8.615850e-47 |
| Msa0630660 | Msa1361930 | 0.808633 | 2.813447e-50 | -8.615850e-47 |
| Msa0630660 | Msa1364410 | 0.836457 | 9.251960e-57 | -8.615850e-47 |
| Msa0630660 | Msa1367180 | 0.825285 | 5.094006e-54 | -8.615850e-47 |
| Msa0630660 | Msa1367520 | 0.802104 | 6.570979e-49 | -8.615850e-47 |
| Msa0630660 | Msa1368750 | 0.816178 | 6.320982e-52 | -8.615850e-47 |
| Msa0630660 | Msa1374790 | 0.826592 | 2.493009e-54 | -8.615850e-47 |
| Msa0630660 | Msa1375350 | 0.822357 | 2.473864e-53 | -8.615850e-47 |
| Msa0630660 | Msa1381470 | 0.830426 | 2.956838e-55 | -8.615850e-47 |
| Msa0630660 | Msa1383310 | 0.806987 | 6.297459e-50 | -8.615850e-47 |
| Msa0630660 | Msa1384150 | 0.803935 | 2.749237e-49 | -8.615850e-47 |
| Msa0630660 | Msa1387440 | 0.804215 | 2.404584e-49 | -8.615850e-47 |
| Msa0630660 | Msa1387500 | 0.818903 | 1.537507e-52 | -8.615850e-47 |
| Msa0630660 | Msa1393560 | 0.803826 | 2.896261e-49 | -8.615850e-47 |
| Msa0630660 | Msa1400010 | 0.835860 | 1.312051e-56 | -8.615850e-47 |
| Msa0630660 | Msa1406720 | 0.825822 | 3.801601e-54 | -8.615850e-47 |
| Msa0630660 | Msa1409410 | 0.810991 | 8.753614e-51 | -8.615850e-47 |
| Msa0630660 | Msa1417060 | 0.809810 | 1.573939e-50 | -8.615850e-47 |
| Msa0630660 | Msa1424590 | 0.802720 | 4.907877e-49 | -8.615850e-47 |
| Msa0630660 | Msa1426110 | 0.808683 | 2.746083e-50 | -8.615850e-47 |
| Msa0630660 | Msa1426320 | 0.814531 | 1.469221e-51 | -8.615850e-47 |
| Msa0630660 | Msa1434640 | 0.832981 | 6.930073e-56 | -8.615850e-47 |
| Msa0630660 | Msa1442260 | 0.823652 | 1.234357e-53 | -8.615850e-47 |
| Msa0630660 | Msa1445120 | 0.813630 | 2.322504e-51 | -8.615850e-47 |
| Msa0630660 | Msa1447170 | 0.820821 | 5.600887e-53 | -8.615850e-47 |
| Msa0630660 | Msa1450190 | 0.834860 | 2.347477e-56 | -8.615850e-47 |
| Msa0630660 | Msa1451820 | 0.826544 | 2.559503e-54 | -8.615850e-47 |
| Msa0630660 | Msa1454010 | 0.814379 | 1.587442e-51 | -8.615850e-47 |
| Msa0121330 | Msa0630660 | 0.824251 | 8.931987e-54 | -8.615850e-47 |
| Msa0122330 | Msa0630660 | 0.811820 | 5.781010e-51 | -8.615850e-47 |
| Msa0123070 | Msa0630660 | 0.819037 | 1.432940e-52 | -8.615850e-47 |
| Msa0127340 | Msa0630660 | 0.817433 | 3.306825e-52 | -8.615850e-47 |
| Msa0127680 | Msa0630660 | 0.818063 | 2.383225e-52 | -8.615850e-47 |
| Msa0140210 | Msa0630660 | 0.814571 | 1.439432e-51 | -8.615850e-47 |
| Msa0140380 | Msa0630660 | 0.837074 | 6.440906e-57 | -8.615850e-47 |
| Msa0141640 | Msa0630660 | 0.812255 | 4.648052e-51 | -8.615850e-47 |
| Msa0153210 | Msa0630660 | 0.807639 | 4.582447e-50 | -8.615850e-47 |
| Msa0154620 | Msa0630660 | 0.809122 | 2.211206e-50 | -8.615850e-47 |
| Msa0156050 | Msa0630660 | 0.800701 | 1.273637e-48 | -8.615850e-47 |
| Msa0156510 | Msa0630660 | 0.809724 | 1.642185e-50 | -8.615850e-47 |
| Msa0159590 | Msa0630660 | 0.817933 | 2.550608e-52 | -8.615850e-47 |
| Msa0159620 | Msa0630660 | 0.801318 | 9.529983e-49 | -8.615850e-47 |
| Msa0160160 | Msa0630660 | 0.829934 | 3.898212e-55 | -8.615850e-47 |
| Msa0160170 | Msa0630660 | 0.837762 | 4.293321e-57 | -8.615850e-47 |
| Msa0165830 | Msa0630660 | 0.834856 | 2.352605e-56 | -8.615850e-47 |
| Msa0166170 | Msa0630660 | 0.840122 | 1.051633e-57 | -8.615850e-47 |
| Msa0168050 | Msa0630660 | 0.800528 | 1.381821e-48 | -8.615850e-47 |
| Msa0170070 | Msa0630660 | 0.814417 | 1.557142e-51 | -8.615850e-47 |
| Msa0176060 | Msa0630660 | 0.809346 | 1.980429e-50 | -8.615850e-47 |
| Msa0190730 | Msa0630660 | 0.826025 | 3.401368e-54 | -8.615850e-47 |
| Msa0194630 | Msa0630660 | 0.803822 | 2.902107e-49 | -8.615850e-47 |
| Msa0200050 | Msa0630660 | 0.807516 | 4.865735e-50 | -8.615850e-47 |
| Msa0232760 | Msa0630660 | 0.814449 | 1.532303e-51 | -8.615850e-47 |
| Msa0233020 | Msa0630660 | 0.810112 | 1.354987e-50 | -8.615850e-47 |
| Msa0367520 | Msa0630660 | 0.833056 | 6.639614e-56 | -8.615850e-47 |
| Msa0368860 | Msa0630660 | 0.824046 | 9.976840e-54 | -8.615850e-47 |
| Msa0373170 | Msa0630660 | 0.839721 | 1.337558e-57 | -8.615850e-47 |
| Msa0373500 | Msa0630660 | 0.835195 | 1.933104e-56 | -8.615850e-47 |
| Msa0373590 | Msa0630660 | 0.806166 | 9.386391e-50 | -8.615850e-47 |
| Msa0380670 | Msa0630660 | 0.804100 | 2.539803e-49 | -8.615850e-47 |
| Msa0381730 | Msa0630660 | 0.812687 | 3.739598e-51 | -8.615850e-47 |
| Msa0382740 | Msa0630660 | 0.831253 | 1.853372e-55 | -8.615850e-47 |
| Msa0382770 | Msa0630660 | 0.832806 | 7.662972e-56 | -8.615850e-47 |
| Msa0383000 | Msa0630660 | 0.832350 | 9.939446e-56 | -8.615850e-47 |
| Msa0412130 | Msa0630660 | 0.800037 | 1.739355e-48 | -8.615850e-47 |
| Msa0415140 | Msa0630660 | 0.804431 | 2.167355e-49 | -8.615850e-47 |
| Msa0416160 | Msa0630660 | 0.839453 | 1.570441e-57 | -8.615850e-47 |
| Msa0420670 | Msa0630660 | 0.825203 | 5.327765e-54 | -8.615850e-47 |
| Msa0421130 | Msa0630660 | 0.820080 | 8.285308e-53 | -8.615850e-47 |
| Msa0421750 | Msa0630660 | 0.829385 | 5.302851e-55 | -8.615850e-47 |
| Msa0422050 | Msa0630660 | 0.835788 | 1.368176e-56 | -8.615850e-47 |
| Msa0431200 | Msa0630660 | 0.811835 | 5.739049e-51 | -8.615850e-47 |
| Msa0432010 | Msa0630660 | 0.819364 | 1.207137e-52 | -8.615850e-47 |
| Msa0433150 | Msa0630660 | 0.830975 | 2.169670e-55 | -8.615850e-47 |
| Msa0433760 | Msa0630660 | 0.826271 | 2.972717e-54 | -8.615850e-47 |
| Msa0443410 | Msa0630660 | 0.829174 | 5.964724e-55 | -8.615850e-47 |
| Msa0456670 | Msa0630660 | 0.825860 | 3.722390e-54 | -8.615850e-47 |
| Msa0462780 | Msa0630660 | 0.821117 | 4.788782e-53 | -8.615850e-47 |
| Msa0466520 | Msa0630660 | 0.827324 | 1.666071e-54 | -8.615850e-47 |
| Msa0466880 | Msa0630660 | 0.835658 | 1.476455e-56 | -8.615850e-47 |
| Msa0467690 | Msa0630660 | 0.839174 | 1.855042e-57 | -8.615850e-47 |
| Msa0468620 | Msa0630660 | 0.815578 | 8.603075e-52 | -8.615850e-47 |
| Msa0468700 | Msa0630660 | 0.826737 | 2.302203e-54 | -8.615850e-47 |
| Msa0476280 | Msa0630660 | 0.817705 | 2.870445e-52 | -8.615850e-47 |
| Msa0477630 | Msa0630660 | 0.815038 | 1.134702e-51 | -8.615850e-47 |
| Msa0480730 | Msa0630660 | 0.805988 | 1.023043e-49 | -8.615850e-47 |
| Msa0481890 | Msa0630660 | 0.822644 | 2.121714e-53 | -8.615850e-47 |
| Msa0272260 | Msa0630660 | 0.825781 | 3.886747e-54 | -8.615850e-47 |
| Msa0341680 | Msa0630660 | 0.817555 | 3.104100e-52 | -8.615850e-47 |
| Msa0507920 | Msa0630660 | 0.806629 | 7.496092e-50 | -8.615850e-47 |
| Msa0512530 | Msa0630660 | 0.825995 | 3.457129e-54 | -8.615850e-47 |
| Msa0513080 | Msa0630660 | 0.815124 | 1.085781e-51 | -8.615850e-47 |
| Msa0513560 | Msa0630660 | 0.819537 | 1.102573e-52 | -8.615850e-47 |
| Msa0514020 | Msa0630660 | 0.825762 | 3.926840e-54 | -8.615850e-47 |
| Msa0514500 | Msa0630660 | 0.815132 | 1.081417e-51 | -8.615850e-47 |
| Msa0514580 | Msa0630660 | 0.821193 | 4.597706e-53 | -8.615850e-47 |
| Msa0520260 | Msa0630660 | 0.810938 | 8.987523e-51 | -8.615850e-47 |
| Msa0520870 | Msa0630660 | 0.854382 | 1.277946e-61 | -8.615850e-47 |
| Msa0521680 | Msa0630660 | 0.839489 | 1.537028e-57 | -8.615850e-47 |
| Msa0524320 | Msa0630660 | 0.802526 | 5.380072e-49 | -8.615850e-47 |
| Msa0524430 | Msa0630660 | 0.806304 | 8.777401e-50 | -8.615850e-47 |
| Msa0524520 | Msa0630660 | 0.822702 | 2.056744e-53 | -8.615850e-47 |
| Msa0524800 | Msa0630660 | 0.811896 | 5.567352e-51 | -8.615850e-47 |
| Msa0525000 | Msa0630660 | 0.833441 | 5.323803e-56 | -8.615850e-47 |
| Msa0531960 | Msa0630660 | 0.817320 | 3.504905e-52 | -8.615850e-47 |
| Msa0534100 | Msa0630660 | 0.939934 | 5.501434e-100 | -8.615850e-47 |
| Msa0537990 | Msa0630660 | 0.813006 | 3.183749e-51 | -8.615850e-47 |
| Msa0550590 | Msa0630660 | 0.857884 | 1.204305e-62 | -8.615850e-47 |
| Msa0554300 | Msa0630660 | 0.813462 | 2.528241e-51 | -8.615850e-47 |
| Msa0559100 | Msa0630660 | 0.801729 | 7.847040e-49 | -8.615850e-47 |
| Msa0561560 | Msa0630660 | 0.836455 | 9.264214e-57 | -8.615850e-47 |
| Msa0563740 | Msa0630660 | 0.820633 | 6.186468e-53 | -8.615850e-47 |
| Msa0563900 | Msa0630660 | 0.803310 | 3.704863e-49 | -8.615850e-47 |
| Msa0567170 | Msa0630660 | 0.824475 | 7.909715e-54 | -8.615850e-47 |
| Msa0571620 | Msa0630660 | 0.814023 | 1.902628e-51 | -8.615850e-47 |
| Msa0572830 | Msa0630660 | 0.811902 | 5.550025e-51 | -8.615850e-47 |
| Msa0577280 | Msa0630660 | 0.821451 | 4.010236e-53 | -8.615850e-47 |
| Msa0577330 | Msa0630660 | 0.828264 | 9.899746e-55 | -8.615850e-47 |
| Msa0577450 | Msa0630660 | 0.835426 | 1.689418e-56 | -8.615850e-47 |
| Msa0577820 | Msa0630660 | 0.828113 | 1.076762e-54 | -8.615850e-47 |
| Msa0580200 | Msa0630660 | 0.804665 | 1.936776e-49 | -8.615850e-47 |
| Msa0580810 | Msa0630660 | 0.801888 | 7.279126e-49 | -8.615850e-47 |
| Msa0581840 | Msa0630660 | 0.823131 | 1.633702e-53 | -8.615850e-47 |
| Msa0585340 | Msa0630660 | 0.809894 | 1.509836e-50 | -8.615850e-47 |
| Msa0590200 | Msa0630660 | 0.907650 | 4.028219e-81 | -8.615850e-47 |
| Msa0593400 | Msa0630660 | 0.808002 | 3.835215e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630660 | MtrunA17_Chr4g0007641 | 95.000 | 520 | 26 | 0 | 1 | 520 | 324 | 843 | 0.0 | 1003 |
| Msa0630660 | MtrunA17_Chr7g0215341 | 85.962 | 520 | 73 | 0 | 1 | 520 | 308 | 827 | 0.0 | 916 |
| Msa0630660 | MtrunA17_Chr5g0406641 | 85.164 | 519 | 77 | 0 | 1 | 519 | 317 | 835 | 0.0 | 906 |
| Msa0630660 | MtrunA17_Chr6g0484831 | 85.000 | 520 | 78 | 0 | 1 | 520 | 316 | 835 | 0.0 | 900 |
| Msa0630660 | MtrunA17_Chr6g0464681 | 75.468 | 534 | 90 | 3 | 1 | 520 | 320 | 826 | 0.0 | 809 |
| Msa0630660 | MtrunA17_Chr6g0486931 | 59.961 | 507 | 197 | 4 | 1 | 504 | 414 | 917 | 0.0 | 626 |
| Msa0630660 | MtrunA17_Chr8g0369361 | 55.754 | 504 | 220 | 2 | 1 | 503 | 273 | 774 | 0.0 | 585 |
| Msa0630660 | MtrunA17_Chr5g0427891 | 57.143 | 343 | 146 | 1 | 162 | 504 | 1 | 342 | 2.47e-139 | 406 |
| Msa0630660 | MtrunA17_Chr2g0302601 | 34.383 | 381 | 206 | 8 | 122 | 492 | 1215 | 1561 | 1.05e-60 | 216 |
| Msa0630660 | MtrunA17_Chr4g0017221 | 34.726 | 383 | 200 | 9 | 122 | 491 | 1190 | 1535 | 2.93e-59 | 212 |
| Msa0630660 | MtrunA17_Chr6g0477371 | 34.211 | 380 | 206 | 8 | 122 | 491 | 1206 | 1551 | 3.95e-59 | 212 |
| Msa0630660 | MtrunA17_Chr8g0364111 | 74.242 | 66 | 17 | 0 | 438 | 503 | 3 | 68 | 3.34e-27 | 105 |
| Msa0630660 | MtrunA17_Chr5g0427881 | 60.938 | 64 | 25 | 0 | 74 | 137 | 40 | 103 | 1.35e-23 | 95.5 |
| Msa0630660 | MtrunA17_Chr3g0087051 | 35.503 | 169 | 85 | 4 | 331 | 491 | 2 | 154 | 2.23e-22 | 93.6 |
| Msa0630660 | MtrunA17_Chr2g0306841 | 35.556 | 90 | 58 | 0 | 237 | 326 | 15 | 104 | 1.91e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0630660 | AT1G80740.1 | 57.087 | 515 | 207 | 7 | 1 | 507 | 277 | 785 | 0.0 | 590 |
| Msa0630660 | AT1G69770.1 | 58.614 | 505 | 203 | 5 | 1 | 500 | 321 | 824 | 0.0 | 589 |
| Msa0630660 | AT4G19020.1 | 55.644 | 505 | 220 | 2 | 1 | 503 | 779 | 1281 | 0.0 | 583 |
| Msa0630660 | AT4G19020.2 | 55.644 | 505 | 220 | 2 | 1 | 503 | 731 | 1233 | 0.0 | 582 |
| Msa0630660 | AT4G14140.3 | 35.829 | 374 | 208 | 8 | 122 | 491 | 1168 | 1513 | 1.37e-59 | 213 |
| Msa0630660 | AT4G14140.1 | 35.829 | 374 | 208 | 8 | 122 | 491 | 1168 | 1513 | 1.37e-59 | 213 |
| Msa0630660 | AT4G14140.2 | 35.450 | 378 | 212 | 8 | 118 | 491 | 1190 | 1539 | 1.98e-59 | 213 |
| Msa0630660 | AT4G08990.1 | 35.401 | 387 | 216 | 9 | 111 | 491 | 1148 | 1506 | 1.42e-58 | 211 |
| Msa0630660 | AT5G49160.2 | 35.013 | 377 | 209 | 10 | 118 | 488 | 1091 | 1437 | 5.92e-57 | 206 |
| Msa0630660 | AT5G49160.1 | 35.013 | 377 | 209 | 10 | 118 | 488 | 1179 | 1525 | 6.06e-57 | 206 |
| Msa0630660 | AT4G13610.1 | 34.615 | 390 | 203 | 10 | 111 | 491 | 1057 | 1403 | 9.86e-56 | 202 |
Find 135 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTCGCTGGTGGGTATC+TGG | 0.159704 | 4_3:+12622348 | Msa0630660:CDS |
| TCATCGTTATTTAACTTATA+TGG | 0.198097 | 4_3:-12623440 | None:intergenic |
| TTCTCCATCAATATATATTT+AGG | 0.241682 | 4_3:-12622310 | None:intergenic |
| TCTTGGCTTGAAAATGAAAA+TGG | 0.247732 | 4_3:-12624958 | None:intergenic |
| AGATATGGAACCTTCTTCTT+TGG | 0.258574 | 4_3:-12623485 | None:intergenic |
| AAGACAACTTGGATACTTAA+AGG | 0.290097 | 4_3:-12624845 | None:intergenic |
| ACAAATTTCATCGCATAATC+CGG | 0.322892 | 4_3:-12623770 | None:intergenic |
| CCAGATTGCTATAAACTTTG+TGG | 0.326211 | 4_3:+12624335 | Msa0630660:CDS |
| ATAACCTGGTTGTGAGGTTC+TGG | 0.329152 | 4_3:-12623954 | None:intergenic |
| TATTAACAAGCACACCCTTT+AGG | 0.331476 | 4_3:-12623602 | None:intergenic |
| ATCTGACTCTGAGGTATTTG+AGG | 0.339615 | 4_3:+12621454 | Msa0630660:CDS |
| GCTTGCCCCAGCGTTGTACC+TGG | 0.360590 | 4_3:+12622825 | Msa0630660:CDS |
| GAAAGAGTGTATCTGAAATC+TGG | 0.362870 | 4_3:+12623654 | Msa0630660:CDS |
| TGGCTCCCATGTATCATAAC+TGG | 0.370498 | 4_3:-12621837 | None:intergenic |
| GAAGCCTAAATATATATTGA+TGG | 0.373783 | 4_3:+12622306 | Msa0630660:CDS |
| GGTCAAGCTGATTTCATTTG+TGG | 0.380278 | 4_3:+12622169 | Msa0630660:CDS |
| TTAGTGGTTTCAATCGCTTT+AGG | 0.380660 | 4_3:+12622212 | Msa0630660:CDS |
| AAATTCGCTGGTGGGTATCT+GGG | 0.401492 | 4_3:+12622349 | Msa0630660:CDS |
| GTAAGAACTCTGTCTTGCTT+TGG | 0.411012 | 4_3:-12624281 | None:intergenic |
| TTCCAGAGTTTGAATACTCT+TGG | 0.413434 | 4_3:-12624975 | None:intergenic |
| AGACAACTTGGATACTTAAA+GGG | 0.415659 | 4_3:-12624844 | None:intergenic |
| CACATTAAATATTCACACTT+TGG | 0.416932 | 4_3:+12625029 | Msa0630660:three_prime_UTR |
| CGTACGGCCTTCCTCAGTTT+CGG | 0.417102 | 4_3:+12622440 | Msa0630660:CDS |
| TGTCATAATGCAGGAAATTA+CGG | 0.427063 | 4_3:+12622774 | Msa0630660:intron |
| GCTGAATACAACAGGCCATT+TGG | 0.427862 | 4_3:+12623888 | Msa0630660:intron |
| CATGCATTATCAAGCTAGAA+TGG | 0.430331 | 4_3:+12622399 | Msa0630660:CDS |
| CCACAAAGTTTATAGCAATC+TGG | 0.432209 | 4_3:-12624335 | None:intergenic |
| TCGAGAGAATGCAAGGCTAC+AGG | 0.432318 | 4_3:+12624307 | Msa0630660:CDS |
| TGTGAGAAGTTTGTTCTGAA+TGG | 0.441943 | 4_3:+12621353 | Msa0630660:CDS |
| TCTGAAATCTGGGAAGCCTT+TGG | 0.448836 | 4_3:+12623665 | Msa0630660:CDS |
| GTTCCTGTGGGCCTTGCCCT+CGG | 0.450192 | 4_3:+12624763 | Msa0630660:CDS |
| CAAGCTGATTTCATTTGTGG+TGG | 0.453980 | 4_3:+12622172 | Msa0630660:CDS |
| ATGAAAGAATTTGTCACTAA+AGG | 0.456848 | 4_3:+12622002 | Msa0630660:CDS |
| TTGCCTCATTCCAAAGAAGA+AGG | 0.460877 | 4_3:+12623475 | Msa0630660:CDS |
| GTATACCTCAAGCCCTCAAT+TGG | 0.466800 | 4_3:-12621857 | None:intergenic |
| GAACCTTCTTCTTTGGAATG+AGG | 0.469060 | 4_3:-12623478 | None:intergenic |
| ATTTAACAGCAATTGTAAAG+AGG | 0.474358 | 4_3:+12621977 | Msa0630660:intron |
| ACAGGCCATTTGGTCGACTT+TGG | 0.475021 | 4_3:+12623898 | Msa0630660:intron |
| GAACTCTGTCTTGCTTTGGA+TGG | 0.480776 | 4_3:-12624277 | None:intergenic |
| CCTTGCCCTCGGATACACAC+TGG | 0.484530 | 4_3:+12624774 | Msa0630660:CDS |
| GGCAAACTTCAGGGACCTAA+AGG | 0.491099 | 4_3:+12623587 | Msa0630660:CDS |
| CTTGCCCTCGGATACACACT+GGG | 0.492440 | 4_3:+12624775 | Msa0630660:CDS |
| AGCCAAGAGTATTCAAACTC+TGG | 0.494156 | 4_3:+12624973 | Msa0630660:three_prime_UTR |
| TGATACATGGGAGCCAATTG+AGG | 0.494303 | 4_3:+12621844 | Msa0630660:CDS |
| AGAATGGGAATGATGGCTGC+AGG | 0.497284 | 4_3:+12622415 | Msa0630660:CDS |
| AAACTCTGGAATTGTATGAA+TGG | 0.497426 | 4_3:+12624987 | Msa0630660:three_prime_UTR |
| TATCCGAGGGCAAGGCCCAC+AGG | 0.498141 | 4_3:-12624766 | None:intergenic |
| ATTTGTCACTAAAGGATATG+AGG | 0.501542 | 4_3:+12622010 | Msa0630660:CDS |
| GCCATTTGGTCGACTTTGGT+GGG | 0.501789 | 4_3:+12623902 | Msa0630660:CDS |
| AAAGAGTGTATCTGAAATCT+GGG | 0.501903 | 4_3:+12623655 | Msa0630660:CDS |
| CCTGGTTGTGAGGTTCTGGC+CGG | 0.503821 | 4_3:-12623950 | None:intergenic |
| CGTCACCCAGGTACAACGCT+GGG | 0.505362 | 4_3:-12622831 | None:intergenic |
| TAATAAGAATAAAGTGGAGT+TGG | 0.507206 | 4_3:+12623620 | Msa0630660:CDS |
| ATGATGGCTGCAGGGTCGTA+CGG | 0.507692 | 4_3:+12622424 | Msa0630660:CDS |
| TATCTCTGAAAATCAGTATG+AGG | 0.512002 | 4_3:-12623017 | None:intergenic |
| ACACTGGGTTTAGCAATTCA+AGG | 0.513390 | 4_3:+12624790 | Msa0630660:CDS |
| GATACATGGGAGCCAATTGA+GGG | 0.513471 | 4_3:+12621845 | Msa0630660:CDS |
| TTAGCTGTAGTTGATGATGA+TGG | 0.513567 | 4_3:+12624877 | Msa0630660:CDS |
| ATGACTCCAGTTATGATACA+TGG | 0.517212 | 4_3:+12621831 | Msa0630660:CDS |
| GGCCATTTGGTCGACTTTGG+TGG | 0.517220 | 4_3:+12623901 | Msa0630660:intron |
| ATCTTTCAGGTGCAGTGGAA+GGG | 0.518544 | 4_3:+12621806 | Msa0630660:intron |
| GCTTGTTAATAAGAATAAAG+TGG | 0.518752 | 4_3:+12623614 | Msa0630660:CDS |
| TTGGGGAGCTCTTCCTACCC+AGG | 0.520780 | 4_3:+12622477 | Msa0630660:CDS |
| AAAGGACGGGCAAGACAACT+TGG | 0.522582 | 4_3:-12624856 | None:intergenic |
| TTAGCAATTCAAGGACGCTC+TGG | 0.523304 | 4_3:+12624799 | Msa0630660:CDS |
| TCATCATCAACTACAGCTAA+AGG | 0.523999 | 4_3:-12624874 | None:intergenic |
| TAATGCAGGTACATACAAGT+TGG | 0.525057 | 4_3:+12624727 | Msa0630660:intron |
| AATCTTTCAGGTGCAGTGGA+AGG | 0.527731 | 4_3:+12621805 | Msa0630660:intron |
| TCCCACCAAAGTCGACCAAA+TGG | 0.528934 | 4_3:-12623903 | None:intergenic |
| CGAGAGAATGCAAGGCTACA+GGG | 0.529397 | 4_3:+12624308 | Msa0630660:CDS |
| TATATCAGATTAAAGAGAAG+TGG | 0.529928 | 4_3:+12623038 | Msa0630660:CDS |
| ATGCATTATCAAGCTAGAAT+GGG | 0.531010 | 4_3:+12622400 | Msa0630660:CDS |
| TCAAGCTAGAATGGGAATGA+TGG | 0.534324 | 4_3:+12622408 | Msa0630660:CDS |
| AATGCGGTTGCTGTTCCTGT+GGG | 0.537648 | 4_3:+12624751 | Msa0630660:CDS |
| CTCGATTCAACCTCATGAGT+TGG | 0.541627 | 4_3:-12622635 | None:intergenic |
| AGATACACTCTTTCAACAGA+GGG | 0.551050 | 4_3:-12623645 | None:intergenic |
| GGAAAAGACATGAATTAATG+AGG | 0.552426 | 4_3:-12624916 | None:intergenic |
| CATTCTAGCTTGATAATGCA+TGG | 0.554948 | 4_3:-12622398 | None:intergenic |
| CTTGCCCCAGCGTTGTACCT+GGG | 0.556613 | 4_3:+12622826 | Msa0630660:CDS |
| GCAAACTTCAGGGACCTAAA+GGG | 0.558745 | 4_3:+12623588 | Msa0630660:CDS |
| TTTGTGGCCCTATAAAAGAA+AGG | 0.560000 | 4_3:+12624351 | Msa0630660:CDS |
| TTATAATCTTTCAGGTGCAG+TGG | 0.561163 | 4_3:+12621801 | Msa0630660:intron |
| TGATTTGAATGCTTGTGAAG+AGG | 0.562683 | 4_3:+12621394 | Msa0630660:CDS |
| TGAGTTGGTAGCGGATATGA+AGG | 0.564641 | 4_3:-12622620 | None:intergenic |
| TATCTGGGGCGTTATGCTGT+AGG | 0.564853 | 4_3:+12622364 | Msa0630660:CDS |
| TGATCATACAGCAGACCACT+TGG | 0.567396 | 4_3:-12623413 | None:intergenic |
| CTGGTTGTGAGGTTCTGGCC+GGG | 0.572588 | 4_3:-12623949 | None:intergenic |
| ATCAACTACAGCTAAAGGAC+GGG | 0.574319 | 4_3:-12624869 | None:intergenic |
| GTAGCGAGACTTACAGGAAG+AGG | 0.577600 | 4_3:-12622044 | None:intergenic |
| GTGGTCTGCTGTATGATCAC+AGG | 0.579654 | 4_3:+12623417 | Msa0630660:CDS |
| TAGCCTTGCATTCTCTCGAA+TGG | 0.582798 | 4_3:-12624303 | None:intergenic |
| TTACCATTCGAGAGAATGCA+AGG | 0.584921 | 4_3:+12624300 | Msa0630660:CDS |
| CAAATTTCATCGCATAATCC+GGG | 0.586118 | 4_3:-12623769 | None:intergenic |
| CCGGCCAGAACCTCACAACC+AGG | 0.586455 | 4_3:+12623950 | Msa0630660:CDS |
| TTGAATGCTTGTGAAGAGGC+TGG | 0.588478 | 4_3:+12621398 | Msa0630660:CDS |
| GGGAGCCAATTGAGGGCTTG+AGG | 0.588756 | 4_3:+12621852 | Msa0630660:CDS |
| AAATGCGGTTGCTGTTCCTG+TGG | 0.590835 | 4_3:+12624750 | Msa0630660:CDS |
| CCAGTGTGTATCCGAGGGCA+AGG | 0.592139 | 4_3:-12624774 | None:intergenic |
| ACCACTAATCCCTTGACAAG+GGG | 0.596723 | 4_3:-12622197 | None:intergenic |
| TTGTGTCCACAGTTGTGACC+CGG | 0.601223 | 4_3:+12623931 | Msa0630660:CDS |
| GCGTCACCCAGGTACAACGC+TGG | 0.605573 | 4_3:-12622832 | None:intergenic |
| GGAAGAAATCAAGATAACAA+TGG | 0.607172 | 4_3:-12624937 | None:intergenic |
| CTAAACCCAGTGTGTATCCG+AGG | 0.609698 | 4_3:-12624780 | None:intergenic |
| AATTCGCTGGTGGGTATCTG+GGG | 0.614167 | 4_3:+12622350 | Msa0630660:CDS |
| AGACTACTCTCTGTATGCTA+TGG | 0.616712 | 4_3:+12621482 | Msa0630660:CDS |
| TTATGCTGTAGGACGTCTAG+TGG | 0.616930 | 4_3:+12622375 | Msa0630660:CDS |
| GGTCATCAATTGCGTCACCC+AGG | 0.619951 | 4_3:-12622843 | None:intergenic |
| AGAAGCTGATGATGAAGCAA+TGG | 0.621454 | 4_3:+12621424 | Msa0630660:CDS |
| CATCAACTACAGCTAAAGGA+CGG | 0.622151 | 4_3:-12624870 | None:intergenic |
| TTCTGGCCGGGTCACAACTG+TGG | 0.623602 | 4_3:-12623937 | None:intergenic |
| TCAACCTCATGAGTTGGTAG+CGG | 0.625031 | 4_3:-12622629 | None:intergenic |
| CAGATACACTCTTTCAACAG+AGG | 0.630022 | 4_3:-12623646 | None:intergenic |
| GAATGGGAATGATGGCTGCA+GGG | 0.631874 | 4_3:+12622416 | Msa0630660:CDS |
| CACGCATCCGAAACTGAGGA+AGG | 0.633272 | 4_3:-12622447 | None:intergenic |
| TGACTCCAGTTATGATACAT+GGG | 0.636735 | 4_3:+12621832 | Msa0630660:CDS |
| AAACCACTAATCCCTTGACA+AGG | 0.639560 | 4_3:-12622199 | None:intergenic |
| GACAACTTGGATACTTAAAG+GGG | 0.640325 | 4_3:-12624843 | None:intergenic |
| ATCGAGATCTGTTCTTACCA+CGG | 0.643104 | 4_3:+12622652 | Msa0630660:CDS |
| CTGAAAATCAGTATGAGGAG+TGG | 0.643468 | 4_3:-12623012 | None:intergenic |
| GACTCTGAAAGTGCACCAAG+TGG | 0.647241 | 4_3:+12623398 | Msa0630660:CDS |
| TTAAAGGGGAGAGTTGTCAA+AGG | 0.651603 | 4_3:-12624829 | None:intergenic |
| TAAACCCAGTGTGTATCCGA+GGG | 0.654894 | 4_3:-12624779 | None:intergenic |
| AGCTATGGCTTTACCTGGGT+AGG | 0.656939 | 4_3:-12622490 | None:intergenic |
| AAAACACGCATCCGAAACTG+AGG | 0.657217 | 4_3:-12622451 | None:intergenic |
| GGATAGTTCATCTGACTCTG+AGG | 0.663849 | 4_3:+12621445 | Msa0630660:CDS |
| AGTTCTTACTTCAAACTCCG+TGG | 0.666173 | 4_3:-12622669 | None:intergenic |
| AACCACTAATCCCTTGACAA+GGG | 0.672154 | 4_3:-12622198 | None:intergenic |
| AAAATTAACATACTGGAGGG+AGG | 0.675330 | 4_3:-12622864 | None:intergenic |
| GTCACCCAGGTACAACGCTG+GGG | 0.678324 | 4_3:-12622830 | None:intergenic |
| TATGCGATGAAATTTGTCCG+TGG | 0.691048 | 4_3:+12623776 | Msa0630660:CDS |
| GTACATACAAGTTGGAAATG+CGG | 0.691245 | 4_3:+12624735 | Msa0630660:CDS |
| ATATCCGCTACCAACTCATG+AGG | 0.696017 | 4_3:+12622625 | Msa0630660:CDS |
| GATACACTCTTTCAACAGAG+GGG | 0.708698 | 4_3:-12623644 | None:intergenic |
| CCACTAATCCCTTGACAAGG+GGG | 0.708968 | 4_3:-12622196 | None:intergenic |
| CATACTTAGAGGAAGTACCA+CGG | 0.770558 | 4_3:-12623793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTATAAATATAGAA+GGG | - | chr4_3:12624485-12624504 | None:intergenic | 10.0% |
| !!! | AATTTTGTTATAAATATAGA+AGG | - | chr4_3:12624486-12624505 | None:intergenic | 10.0% |
| !! | TTCTAAATTTATAATCTTTC+AGG | + | chr4_3:12621793-12621812 | Msa0630660:intron | 15.0% |
| !! | CATAAAAAATAAGCAATTAT+TGG | + | chr4_3:12622258-12622277 | Msa0630660:CDS | 15.0% |
| !! | TATAATATCAATTCAAGATA+TGG | - | chr4_3:12623503-12623522 | None:intergenic | 15.0% |
| !!! | TTTTTTCAATTAAACTTATC+TGG | + | chr4_3:12624110-12624129 | Msa0630660:intron | 15.0% |
| !!! | TTTTATCTCTTTTAAAAGAG+TGG | + | chr4_3:12621321-12621340 | Msa0630660:CDS | 20.0% |
| !!! | CAAGTTTTTATGTAAAAACA+TGG | + | chr4_3:12621738-12621757 | Msa0630660:intron | 20.0% |
| !! | TAAATAATGCAAGATTCTAA+CGG | + | chr4_3:12621948-12621967 | Msa0630660:intron | 20.0% |
| !!! | TTATTTTTTATGTCATCCAT+AGG | - | chr4_3:12622250-12622269 | None:intergenic | 20.0% |
| !! | TTCTCCATCAATATATATTT+AGG | - | chr4_3:12622313-12622332 | None:intergenic | 20.0% |
| !!! | TATAACTAAAGTTTTGTATG+TGG | + | chr4_3:12623263-12623282 | Msa0630660:intron | 20.0% |
| !! | ATAATTCATGTTAATGATGA+AGG | - | chr4_3:12623332-12623351 | None:intergenic | 20.0% |
| !!! | TCATCGTTATTTAACTTATA+TGG | - | chr4_3:12623443-12623462 | None:intergenic | 20.0% |
| !! | ATGCACAATTAAAATTTACA+GGG | - | chr4_3:12623550-12623569 | None:intergenic | 20.0% |
| !! | AATGCACAATTAAAATTTAC+AGG | - | chr4_3:12623551-12623570 | None:intergenic | 20.0% |
| !!! | CATTGGTTTTACAAAATATA+AGG | - | chr4_3:12623997-12624016 | None:intergenic | 20.0% |
| !! | CATAATAAATGTTCATTGTT+TGG | + | chr4_3:12624158-12624177 | Msa0630660:intron | 20.0% |
| !!! | CTCTAAGTTATTTTATGTAT+AGG | + | chr4_3:12624247-12624266 | Msa0630660:intron | 20.0% |
| !!! | ATACATACCTTTCTTTTATA+GGG | - | chr4_3:12624361-12624380 | None:intergenic | 20.0% |
| !!! | AATACATACCTTTCTTTTAT+AGG | - | chr4_3:12624362-12624381 | None:intergenic | 20.0% |
| ! | ACATAATTAATTATCTTGCG+AGG | + | chr4_3:12621591-12621610 | Msa0630660:intron | 25.0% |
| !!! | CTTTGTAGTTAGTTTTATCT+AGG | + | chr4_3:12621636-12621655 | Msa0630660:intron | 25.0% |
| ! | AAATAACCGCTAAAGTTATA+AGG | - | chr4_3:12621768-12621787 | None:intergenic | 25.0% |
| ! | ATTTAACAGCAATTGTAAAG+AGG | + | chr4_3:12621977-12621996 | Msa0630660:intron | 25.0% |
| ! | ATGAAAGAATTTGTCACTAA+AGG | + | chr4_3:12622002-12622021 | Msa0630660:CDS | 25.0% |
| ! | GAAGCCTAAATATATATTGA+TGG | + | chr4_3:12622306-12622325 | Msa0630660:CDS | 25.0% |
| !!! | AATTTTAGTACAACAAGCTA+TGG | - | chr4_3:12622508-12622527 | None:intergenic | 25.0% |
| !!! | TTGTGACTTTTTCTTAGATA+AGG | + | chr4_3:12622709-12622728 | Msa0630660:intron | 25.0% |
| ! | TATATCAGATTAAAGAGAAG+TGG | + | chr4_3:12623038-12623057 | Msa0630660:CDS | 25.0% |
| !!! | GTTTTGAAGTATATTAGTCT+TGG | + | chr4_3:12623083-12623102 | Msa0630660:intron | 25.0% |
| !! | GCTTGTTAATAAGAATAAAG+TGG | + | chr4_3:12623614-12623633 | Msa0630660:CDS | 25.0% |
| ! | TAATAAGAATAAAGTGGAGT+TGG | + | chr4_3:12623620-12623639 | Msa0630660:CDS | 25.0% |
| ! | ACAACTTAGAAAAAATAACC+TGG | - | chr4_3:12623971-12623990 | None:intergenic | 25.0% |
| ! | AGAAATGTTATCATACCTTA+AGG | + | chr4_3:12624072-12624091 | Msa0630660:intron | 25.0% |
| ! | TGCTAACATTATAATCCTTA+AGG | - | chr4_3:12624090-12624109 | None:intergenic | 25.0% |
| ! | AATGTTTCAATCTTTAATGC+AGG | + | chr4_3:12624713-12624732 | Msa0630660:intron | 25.0% |
| ! | CACATTAAATATTCACACTT+TGG | + | chr4_3:12625029-12625048 | Msa0630660:three_prime_UTR | 25.0% |
| ATTTGTCACTAAAGGATATG+AGG | + | chr4_3:12622010-12622029 | Msa0630660:CDS | 30.0% | |
| ! | GTCTGTGTTACTCATTAAAT+TGG | + | chr4_3:12622120-12622139 | Msa0630660:intron | 30.0% |
| ATGCATTATCAAGCTAGAAT+GGG | + | chr4_3:12622400-12622419 | Msa0630660:CDS | 30.0% | |
| TAGATAAGGAACACTGTAAT+TGG | + | chr4_3:12622723-12622742 | Msa0630660:intron | 30.0% | |
| ! | AAGTTCTAATCAATGTGATC+TGG | + | chr4_3:12622747-12622766 | Msa0630660:intron | 30.0% |
| TGTCATAATGCAGGAAATTA+CGG | + | chr4_3:12622774-12622793 | Msa0630660:intron | 30.0% | |
| AGCAAAATTAACATACTGGA+GGG | - | chr4_3:12622870-12622889 | None:intergenic | 30.0% | |
| TGTGAGCAAAATTAACATAC+TGG | - | chr4_3:12622874-12622893 | None:intergenic | 30.0% | |
| TTTGATTCCATTTCTTTCCT+TGG | + | chr4_3:12622931-12622950 | Msa0630660:intron | 30.0% | |
| TGTTTGATAAGAGAAAACCA+AGG | - | chr4_3:12622951-12622970 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCTCTTATCAAAC+AGG | + | chr4_3:12622950-12622969 | Msa0630660:intron | 30.0% |
| ! | TATCTCTGAAAATCAGTATG+AGG | - | chr4_3:12623020-12623039 | None:intergenic | 30.0% |
| !! | AGTAATTTGTTGTCTTTGCA+TGG | + | chr4_3:12623120-12623139 | Msa0630660:intron | 30.0% |
| ! | AAAGAGTGTATCTGAAATCT+GGG | + | chr4_3:12623655-12623674 | Msa0630660:CDS | 30.0% |
| CAAAAGAAGATTAGTACCAA+AGG | - | chr4_3:12623684-12623703 | None:intergenic | 30.0% | |
| TCAAAATAAATGCATCGCTA+AGG | - | chr4_3:12623707-12623726 | None:intergenic | 30.0% | |
| CTACACAAAAAAAAAAGGCT+TGG | - | chr4_3:12623747-12623766 | None:intergenic | 30.0% | |
| !!! | CAAGCCTTTTTTTTTTGTGT+AGG | + | chr4_3:12623745-12623764 | Msa0630660:intron | 30.0% |
| !!! | TTTTTTTTTTGTGTAGGTCC+CGG | + | chr4_3:12623751-12623770 | Msa0630660:intron | 30.0% |
| ACAAATTTCATCGCATAATC+CGG | - | chr4_3:12623773-12623792 | None:intergenic | 30.0% | |
| ATGCAAATGTACATACTTAG+AGG | - | chr4_3:12623807-12623826 | None:intergenic | 30.0% | |
| ATTTATCTGCTGAATACAAC+AGG | + | chr4_3:12623880-12623899 | Msa0630660:intron | 30.0% | |
| ! | TAAAGAGGTTTTGCAATTTG+AGG | - | chr4_3:12624033-12624052 | None:intergenic | 30.0% |
| TATGATAACATTTCTCAAGG+GGG | - | chr4_3:12624067-12624086 | None:intergenic | 30.0% | |
| GTATGATAACATTTCTCAAG+GGG | - | chr4_3:12624068-12624087 | None:intergenic | 30.0% | |
| GGTATGATAACATTTCTCAA+GGG | - | chr4_3:12624069-12624088 | None:intergenic | 30.0% | |
| AGGTATGATAACATTTCTCA+AGG | - | chr4_3:12624070-12624089 | None:intergenic | 30.0% | |
| ! | ATTGTTTGGACTTGTTTAAG+TGG | + | chr4_3:12624172-12624191 | Msa0630660:intron | 30.0% |
| ! | AGAAAGGTATGTATTTGAAC+TGG | + | chr4_3:12624367-12624386 | Msa0630660:intron | 30.0% |
| !! | TTAGAAAACTTCTGTTTCTG+TGG | + | chr4_3:12624434-12624453 | Msa0630660:intron | 30.0% |
| ! | GTTATAGTTTGAGTTACGTT+TGG | + | chr4_3:12624661-12624680 | Msa0630660:intron | 30.0% |
| AGACAACTTGGATACTTAAA+GGG | - | chr4_3:12624847-12624866 | None:intergenic | 30.0% | |
| AAGACAACTTGGATACTTAA+AGG | - | chr4_3:12624848-12624867 | None:intergenic | 30.0% | |
| GGAAAAGACATGAATTAATG+AGG | - | chr4_3:12624919-12624938 | None:intergenic | 30.0% | |
| GGAAGAAATCAAGATAACAA+TGG | - | chr4_3:12624940-12624959 | None:intergenic | 30.0% | |
| ! | TCTTGGCTTGAAAATGAAAA+TGG | - | chr4_3:12624961-12624980 | None:intergenic | 30.0% |
| !! | AAACTCTGGAATTGTATGAA+TGG | + | chr4_3:12624987-12625006 | Msa0630660:three_prime_UTR | 30.0% |
| ! | TGTGAGAAGTTTGTTCTGAA+TGG | + | chr4_3:12621353-12621372 | Msa0630660:CDS | 35.0% |
| TGATTTGAATGCTTGTGAAG+AGG | + | chr4_3:12621394-12621413 | Msa0630660:CDS | 35.0% | |
| !! | CCTAGTTTTTCATCTTCGTT+GGG | - | chr4_3:12621512-12621531 | None:intergenic | 35.0% |
| !! | TCCTAGTTTTTCATCTTCGT+TGG | - | chr4_3:12621513-12621532 | None:intergenic | 35.0% |
| ATTAATTATCTTGCGAGGAC+TGG | + | chr4_3:12621596-12621615 | Msa0630660:intron | 35.0% | |
| ! | TTATAATCTTTCAGGTGCAG+TGG | + | chr4_3:12621801-12621820 | Msa0630660:intron | 35.0% |
| ATGACTCCAGTTATGATACA+TGG | + | chr4_3:12621831-12621850 | Msa0630660:CDS | 35.0% | |
| TGACTCCAGTTATGATACAT+GGG | + | chr4_3:12621832-12621851 | Msa0630660:CDS | 35.0% | |
| CTTAAGTGAAGCAAAGATAG+AGG | - | chr4_3:12621895-12621914 | None:intergenic | 35.0% | |
| TAAGTCTCGCTACTCATTAT+TGG | + | chr4_3:12622054-12622073 | Msa0630660:intron | 35.0% | |
| AACCATTAGAGGTCAAAGAA+GGG | - | chr4_3:12622092-12622111 | None:intergenic | 35.0% | |
| AAACCATTAGAGGTCAAAGA+AGG | - | chr4_3:12622093-12622112 | None:intergenic | 35.0% | |
| TTAGTGGTTTCAATCGCTTT+AGG | + | chr4_3:12622212-12622231 | Msa0630660:CDS | 35.0% | |
| TAGGAACAAAAATGCTCCTA+TGG | + | chr4_3:12622231-12622250 | Msa0630660:CDS | 35.0% | |
| !!! | GTTGACATTTTGAAATTCGC+TGG | + | chr4_3:12622337-12622356 | Msa0630660:CDS | 35.0% |
| !!! | ACATTTTGAAATTCGCTGGT+GGG | + | chr4_3:12622341-12622360 | Msa0630660:CDS | 35.0% |
| !! | CATTCTAGCTTGATAATGCA+TGG | - | chr4_3:12622401-12622420 | None:intergenic | 35.0% |
| CATGCATTATCAAGCTAGAA+TGG | + | chr4_3:12622399-12622418 | Msa0630660:CDS | 35.0% | |
| AAAATTAACATACTGGAGGG+AGG | - | chr4_3:12622867-12622886 | None:intergenic | 35.0% | |
| GAGCAAAATTAACATACTGG+AGG | - | chr4_3:12622871-12622890 | None:intergenic | 35.0% | |
| GAGAAAACCAAGGAAAGAAA+TGG | - | chr4_3:12622941-12622960 | None:intergenic | 35.0% | |
| ! | ATATCCTTGCTGCTTACATA+AGG | + | chr4_3:12623210-12623229 | Msa0630660:intron | 35.0% |
| AGATATGGAACCTTCTTCTT+TGG | - | chr4_3:12623488-12623507 | None:intergenic | 35.0% | |
| !!! | TGTGCATTCTTGCCTTTTTT+AGG | + | chr4_3:12623563-12623582 | Msa0630660:intron | 35.0% |
| !!! | GTGCATTCTTGCCTTTTTTA+GGG | + | chr4_3:12623564-12623583 | Msa0630660:intron | 35.0% |
| !!! | TGCATTCTTGCCTTTTTTAG+GGG | + | chr4_3:12623565-12623584 | Msa0630660:intron | 35.0% |
| TATTAACAAGCACACCCTTT+AGG | - | chr4_3:12623605-12623624 | None:intergenic | 35.0% | |
| AGATACACTCTTTCAACAGA+GGG | - | chr4_3:12623648-12623667 | None:intergenic | 35.0% | |
| ! | GAAAGAGTGTATCTGAAATC+TGG | + | chr4_3:12623654-12623673 | Msa0630660:CDS | 35.0% |
| GGGACCTACACAAAAAAAAA+AGG | - | chr4_3:12623752-12623771 | None:intergenic | 35.0% | |
| CAAATTTCATCGCATAATCC+GGG | - | chr4_3:12623772-12623791 | None:intergenic | 35.0% | |
| GAAAAAATAACCTGGTTGTG+AGG | - | chr4_3:12623963-12623982 | None:intergenic | 35.0% | |
| TTATGAGTGAAGTTCAAGCA+AGG | - | chr4_3:12624143-12624162 | None:intergenic | 35.0% | |
| CCACAAAGTTTATAGCAATC+TGG | - | chr4_3:12624338-12624357 | None:intergenic | 35.0% | |
| CCAGATTGCTATAAACTTTG+TGG | + | chr4_3:12624335-12624354 | Msa0630660:CDS | 35.0% | |
| TTTGTGGCCCTATAAAAGAA+AGG | + | chr4_3:12624351-12624370 | Msa0630660:CDS | 35.0% | |
| AACTGCTCAATAACTCCTAA+GGG | + | chr4_3:12624552-12624571 | Msa0630660:intron | 35.0% | |
| ! | AAAGTTCTGACTAATCCCTT+AGG | - | chr4_3:12624570-12624589 | None:intergenic | 35.0% |
| !!! | GGGATTAGTCAGAACTTTTT+AGG | + | chr4_3:12624572-12624591 | Msa0630660:intron | 35.0% |
| TAATGCAGGTACATACAAGT+TGG | + | chr4_3:12624727-12624746 | Msa0630660:intron | 35.0% | |
| ! | GTACATACAAGTTGGAAATG+CGG | + | chr4_3:12624735-12624754 | Msa0630660:CDS | 35.0% |
| GACAACTTGGATACTTAAAG+GGG | - | chr4_3:12624846-12624865 | None:intergenic | 35.0% | |
| TCATCATCAACTACAGCTAA+AGG | - | chr4_3:12624877-12624896 | None:intergenic | 35.0% | |
| !! | TTAGCTGTAGTTGATGATGA+TGG | + | chr4_3:12624877-12624896 | Msa0630660:CDS | 35.0% |
| TTCCAGAGTTTGAATACTCT+TGG | - | chr4_3:12624978-12624997 | None:intergenic | 35.0% | |
| ! | AGAAGCTGATGATGAAGCAA+TGG | + | chr4_3:12621424-12621443 | Msa0630660:CDS | 40.0% |
| !! | ATCTGACTCTGAGGTATTTG+AGG | + | chr4_3:12621454-12621473 | Msa0630660:CDS | 40.0% |
| AGACTACTCTCTGTATGCTA+TGG | + | chr4_3:12621482-12621501 | Msa0630660:CDS | 40.0% | |
| CCCAACGAAGATGAAAAACT+AGG | + | chr4_3:12621509-12621528 | Msa0630660:CDS | 40.0% | |
| GGCTCACCTTATAACTTTAG+CGG | + | chr4_3:12621759-12621778 | Msa0630660:intron | 40.0% | |
| TAATGAGTAGCGAGACTTAC+AGG | - | chr4_3:12622053-12622072 | None:intergenic | 40.0% | |
| ACCATTAGAGGTCAAAGAAG+GGG | - | chr4_3:12622091-12622110 | None:intergenic | 40.0% | |
| GACAGTTGACAAACCATTAG+AGG | - | chr4_3:12622103-12622122 | None:intergenic | 40.0% | |
| TACTACTTTGTGCTTGTCCA+GGG | + | chr4_3:12622148-12622167 | Msa0630660:intron | 40.0% | |
| AAATGAAATCAGCTTGACCC+TGG | - | chr4_3:12622168-12622187 | None:intergenic | 40.0% | |
| ! | GGTCAAGCTGATTTCATTTG+TGG | + | chr4_3:12622169-12622188 | Msa0630660:CDS | 40.0% |
| ! | CAAGCTGATTTCATTTGTGG+TGG | + | chr4_3:12622172-12622191 | Msa0630660:CDS | 40.0% |
| AACCACTAATCCCTTGACAA+GGG | - | chr4_3:12622201-12622220 | None:intergenic | 40.0% | |
| AAACCACTAATCCCTTGACA+AGG | - | chr4_3:12622202-12622221 | None:intergenic | 40.0% | |
| !!! | GACATTTTGAAATTCGCTGG+TGG | + | chr4_3:12622340-12622359 | Msa0630660:CDS | 40.0% |
| TCAAGCTAGAATGGGAATGA+TGG | + | chr4_3:12622408-12622427 | Msa0630660:CDS | 40.0% | |
| ! | TTCGGATGCGTGTTTTTCTT+TGG | + | chr4_3:12622458-12622477 | Msa0630660:CDS | 40.0% |
| ! | TCGGATGCGTGTTTTTCTTT+GGG | + | chr4_3:12622459-12622478 | Msa0630660:CDS | 40.0% |
| ! | AACAAGCTATGGCTTTACCT+GGG | - | chr4_3:12622497-12622516 | None:intergenic | 40.0% |
| ATCGAGATCTGTTCTTACCA+CGG | + | chr4_3:12622652-12622671 | Msa0630660:CDS | 40.0% | |
| AGTTCTTACTTCAAACTCCG+TGG | - | chr4_3:12622672-12622691 | None:intergenic | 40.0% | |
| TCTGGCTATTGTCATAATGC+AGG | + | chr4_3:12622765-12622784 | Msa0630660:intron | 40.0% | |
| CTGAAAATCAGTATGAGGAG+TGG | - | chr4_3:12623015-12623034 | None:intergenic | 40.0% | |
| !! | TGTTTTCTCCTCTCTAGAGA+TGG | + | chr4_3:12623361-12623380 | Msa0630660:intron | 40.0% |
| ! | GTAATTCACCATCTCTAGAG+AGG | - | chr4_3:12623372-12623391 | None:intergenic | 40.0% |
| TTGCCTCATTCCAAAGAAGA+AGG | + | chr4_3:12623475-12623494 | Msa0630660:CDS | 40.0% | |
| !! | GAACCTTCTTCTTTGGAATG+AGG | - | chr4_3:12623481-12623500 | None:intergenic | 40.0% |
| !!! | GCATTCTTGCCTTTTTTAGG+GGG | + | chr4_3:12623566-12623585 | Msa0630660:intron | 40.0% |
| TGAAGTTTGCCCCCTAAAAA+AGG | - | chr4_3:12623578-12623597 | None:intergenic | 40.0% | |
| !!! | TTTTTTAGGGGGCAAACTTC+AGG | + | chr4_3:12623577-12623596 | Msa0630660:intron | 40.0% |
| !! | TTTTTAGGGGGCAAACTTCA+GGG | + | chr4_3:12623578-12623597 | Msa0630660:intron | 40.0% |
| GATACACTCTTTCAACAGAG+GGG | - | chr4_3:12623647-12623666 | None:intergenic | 40.0% | |
| CAGATACACTCTTTCAACAG+AGG | - | chr4_3:12623649-12623668 | None:intergenic | 40.0% | |
| TATGCGATGAAATTTGTCCG+TGG | + | chr4_3:12623776-12623795 | Msa0630660:CDS | 40.0% | |
| !! | CATACTTAGAGGAAGTACCA+CGG | - | chr4_3:12623796-12623815 | None:intergenic | 40.0% |
| CAATTTGAGGATAGCATGAG+TGG | - | chr4_3:12624020-12624039 | None:intergenic | 40.0% | |
| TGAAGTTCAAGCAAGGAACA+TGG | - | chr4_3:12624136-12624155 | None:intergenic | 40.0% | |
| GTAAGAACTCTGTCTTGCTT+TGG | - | chr4_3:12624284-12624303 | None:intergenic | 40.0% | |
| TTACCATTCGAGAGAATGCA+AGG | + | chr4_3:12624300-12624319 | Msa0630660:CDS | 40.0% | |
| CAACTGCTCAATAACTCCTA+AGG | + | chr4_3:12624551-12624570 | Msa0630660:intron | 40.0% | |
| ACACTGGGTTTAGCAATTCA+AGG | + | chr4_3:12624790-12624809 | Msa0630660:CDS | 40.0% | |
| TTAAAGGGGAGAGTTGTCAA+AGG | - | chr4_3:12624832-12624851 | None:intergenic | 40.0% | |
| ATCAACTACAGCTAAAGGAC+GGG | - | chr4_3:12624872-12624891 | None:intergenic | 40.0% | |
| CATCAACTACAGCTAAAGGA+CGG | - | chr4_3:12624873-12624892 | None:intergenic | 40.0% | |
| !! | AGCCAAGAGTATTCAAACTC+TGG | + | chr4_3:12624973-12624992 | Msa0630660:three_prime_UTR | 40.0% |
| TTGAATGCTTGTGAAGAGGC+TGG | + | chr4_3:12621398-12621417 | Msa0630660:CDS | 45.0% | |
| GGATAGTTCATCTGACTCTG+AGG | + | chr4_3:12621445-12621464 | Msa0630660:CDS | 45.0% | |
| ! | AATCTTTCAGGTGCAGTGGA+AGG | + | chr4_3:12621805-12621824 | Msa0630660:intron | 45.0% |
| ! | ATCTTTCAGGTGCAGTGGAA+GGG | + | chr4_3:12621806-12621825 | Msa0630660:intron | 45.0% |
| TGGCTCCCATGTATCATAAC+TGG | - | chr4_3:12621840-12621859 | None:intergenic | 45.0% | |
| TGATACATGGGAGCCAATTG+AGG | + | chr4_3:12621844-12621863 | Msa0630660:CDS | 45.0% | |
| GATACATGGGAGCCAATTGA+GGG | + | chr4_3:12621845-12621864 | Msa0630660:CDS | 45.0% | |
| GTATACCTCAAGCCCTCAAT+TGG | - | chr4_3:12621860-12621879 | None:intergenic | 45.0% | |
| ACCCCTTCTTTGACCTCTAA+TGG | + | chr4_3:12622087-12622106 | Msa0630660:intron | 45.0% | |
| GTACTACTTTGTGCTTGTCC+AGG | + | chr4_3:12622147-12622166 | Msa0630660:intron | 45.0% | |
| ACCACTAATCCCTTGACAAG+GGG | - | chr4_3:12622200-12622219 | None:intergenic | 45.0% | |
| ! | AAATTCGCTGGTGGGTATCT+GGG | + | chr4_3:12622349-12622368 | Msa0630660:CDS | 45.0% |
| TTATGCTGTAGGACGTCTAG+TGG | + | chr4_3:12622375-12622394 | Msa0630660:CDS | 45.0% | |
| AAAACACGCATCCGAAACTG+AGG | - | chr4_3:12622454-12622473 | None:intergenic | 45.0% | |
| ! | CGGATGCGTGTTTTTCTTTG+GGG | + | chr4_3:12622460-12622479 | Msa0630660:CDS | 45.0% |
| ! | CAACAAGCTATGGCTTTACC+TGG | - | chr4_3:12622498-12622517 | None:intergenic | 45.0% |
| !! | TGAGTTGGTAGCGGATATGA+AGG | - | chr4_3:12622623-12622642 | None:intergenic | 45.0% |
| ATATCCGCTACCAACTCATG+AGG | + | chr4_3:12622625-12622644 | Msa0630660:CDS | 45.0% | |
| !! | TCAACCTCATGAGTTGGTAG+CGG | - | chr4_3:12622632-12622651 | None:intergenic | 45.0% |
| CTCGATTCAACCTCATGAGT+TGG | - | chr4_3:12622638-12622657 | None:intergenic | 45.0% | |
| CAGTCCTTATGTAAGCAGCA+AGG | - | chr4_3:12623217-12623236 | None:intergenic | 45.0% | |
| TGATCATACAGCAGACCACT+TGG | - | chr4_3:12623416-12623435 | None:intergenic | 45.0% | |
| GCAAACTTCAGGGACCTAAA+GGG | + | chr4_3:12623588-12623607 | Msa0630660:CDS | 45.0% | |
| ! | TCTGAAATCTGGGAAGCCTT+TGG | + | chr4_3:12623665-12623684 | Msa0630660:CDS | 45.0% |
| GCTGAATACAACAGGCCATT+TGG | + | chr4_3:12623888-12623907 | Msa0630660:intron | 45.0% | |
| ATAACCTGGTTGTGAGGTTC+TGG | - | chr4_3:12623957-12623976 | None:intergenic | 45.0% | |
| !! | GGGGCAACATTGCTTTAAAG+AGG | - | chr4_3:12624048-12624067 | None:intergenic | 45.0% |
| ! | GAACTCTGTCTTGCTTTGGA+TGG | - | chr4_3:12624280-12624299 | None:intergenic | 45.0% |
| ! | TAGCCTTGCATTCTCTCGAA+TGG | - | chr4_3:12624306-12624325 | None:intergenic | 45.0% |
| TAAACCCAGTGTGTATCCGA+GGG | - | chr4_3:12624782-12624801 | None:intergenic | 45.0% | |
| TTAGCAATTCAAGGACGCTC+TGG | + | chr4_3:12624799-12624818 | Msa0630660:CDS | 45.0% | |
| GTAGCGAGACTTACAGGAAG+AGG | - | chr4_3:12622047-12622066 | None:intergenic | 50.0% | |
| TCAAAGAAGGGGTTGAGTGC+AGG | - | chr4_3:12622080-12622099 | None:intergenic | 50.0% | |
| CCACTAATCCCTTGACAAGG+GGG | - | chr4_3:12622199-12622218 | None:intergenic | 50.0% | |
| ! | GAAATTCGCTGGTGGGTATC+TGG | + | chr4_3:12622348-12622367 | Msa0630660:CDS | 50.0% |
| ! | AATTCGCTGGTGGGTATCTG+GGG | + | chr4_3:12622350-12622369 | Msa0630660:CDS | 50.0% |
| ! | TATCTGGGGCGTTATGCTGT+AGG | + | chr4_3:12622364-12622383 | Msa0630660:CDS | 50.0% |
| AGAATGGGAATGATGGCTGC+AGG | + | chr4_3:12622415-12622434 | Msa0630660:CDS | 50.0% | |
| GAATGGGAATGATGGCTGCA+GGG | + | chr4_3:12622416-12622435 | Msa0630660:CDS | 50.0% | |
| ! | AGCTATGGCTTTACCTGGGT+AGG | - | chr4_3:12622493-12622512 | None:intergenic | 50.0% |
| ! | GACTCTGAAAGTGCACCAAG+TGG | + | chr4_3:12623398-12623417 | Msa0630660:CDS | 50.0% |
| GTGGTCTGCTGTATGATCAC+AGG | + | chr4_3:12623417-12623436 | Msa0630660:CDS | 50.0% | |
| GGCAAACTTCAGGGACCTAA+AGG | + | chr4_3:12623587-12623606 | Msa0630660:CDS | 50.0% | |
| ! | ACAGGCCATTTGGTCGACTT+TGG | + | chr4_3:12623898-12623917 | Msa0630660:intron | 50.0% |
| ! | GCCATTTGGTCGACTTTGGT+GGG | + | chr4_3:12623902-12623921 | Msa0630660:CDS | 50.0% |
| TCCCACCAAAGTCGACCAAA+TGG | - | chr4_3:12623906-12623925 | None:intergenic | 50.0% | |
| TTGTGTCCACAGTTGTGACC+CGG | + | chr4_3:12623931-12623950 | Msa0630660:CDS | 50.0% | |
| GAGGATAGCATGAGTGGCAT+TGG | - | chr4_3:12624014-12624033 | None:intergenic | 50.0% | |
| TCGAGAGAATGCAAGGCTAC+AGG | + | chr4_3:12624307-12624326 | Msa0630660:CDS | 50.0% | |
| CGAGAGAATGCAAGGCTACA+GGG | + | chr4_3:12624308-12624327 | Msa0630660:CDS | 50.0% | |
| ! | AAATGCGGTTGCTGTTCCTG+TGG | + | chr4_3:12624750-12624769 | Msa0630660:CDS | 50.0% |
| ! | AATGCGGTTGCTGTTCCTGT+GGG | + | chr4_3:12624751-12624770 | Msa0630660:CDS | 50.0% |
| CTAAACCCAGTGTGTATCCG+AGG | - | chr4_3:12624783-12624802 | None:intergenic | 50.0% | |
| AAAGGACGGGCAAGACAACT+TGG | - | chr4_3:12624859-12624878 | None:intergenic | 50.0% | |
| !! | TGCGAGGACTGGCTTCAATC+TGG | + | chr4_3:12621607-12621626 | Msa0630660:intron | 55.0% |
| !! | GCGAGGACTGGCTTCAATCT+GGG | + | chr4_3:12621608-12621627 | Msa0630660:intron | 55.0% |
| CCCCCTTGTCAAGGGATTAG+TGG | + | chr4_3:12622196-12622215 | Msa0630660:CDS | 55.0% | |
| ATGATGGCTGCAGGGTCGTA+CGG | + | chr4_3:12622424-12622443 | Msa0630660:CDS | 55.0% | |
| CGTACGGCCTTCCTCAGTTT+CGG | + | chr4_3:12622440-12622459 | Msa0630660:CDS | 55.0% | |
| CACGCATCCGAAACTGAGGA+AGG | - | chr4_3:12622450-12622469 | None:intergenic | 55.0% | |
| GGTCATCAATTGCGTCACCC+AGG | - | chr4_3:12622846-12622865 | None:intergenic | 55.0% | |
| ! | GGCCATTTGGTCGACTTTGG+TGG | + | chr4_3:12623901-12623920 | Msa0630660:intron | 55.0% |
| CTTGCCCTCGGATACACACT+GGG | + | chr4_3:12624775-12624794 | Msa0630660:CDS | 55.0% | |
| GGGAGCCAATTGAGGGCTTG+AGG | + | chr4_3:12621852-12621871 | Msa0630660:CDS | 60.0% | |
| !! | TGTGGTGGACCCCCTTGTCA+AGG | + | chr4_3:12622187-12622206 | Msa0630660:CDS | 60.0% |
| !! | GTGGTGGACCCCCTTGTCAA+GGG | + | chr4_3:12622188-12622207 | Msa0630660:CDS | 60.0% |
| TTGGGGAGCTCTTCCTACCC+AGG | + | chr4_3:12622477-12622496 | Msa0630660:CDS | 60.0% | |
| CTTGCCCCAGCGTTGTACCT+GGG | + | chr4_3:12622826-12622845 | Msa0630660:CDS | 60.0% | |
| GTCACCCAGGTACAACGCTG+GGG | - | chr4_3:12622833-12622852 | None:intergenic | 60.0% | |
| CGTCACCCAGGTACAACGCT+GGG | - | chr4_3:12622834-12622853 | None:intergenic | 60.0% | |
| TTCTGGCCGGGTCACAACTG+TGG | - | chr4_3:12623940-12623959 | None:intergenic | 60.0% | |
| ! | CTGGTTGTGAGGTTCTGGCC+GGG | - | chr4_3:12623952-12623971 | None:intergenic | 60.0% |
| ! | CCTGGTTGTGAGGTTCTGGC+CGG | - | chr4_3:12623953-12623972 | None:intergenic | 60.0% |
| CCAGTGTGTATCCGAGGGCA+AGG | - | chr4_3:12624777-12624796 | None:intergenic | 60.0% | |
| CCTTGCCCTCGGATACACAC+TGG | + | chr4_3:12624774-12624793 | Msa0630660:CDS | 60.0% | |
| GCTTGCCCCAGCGTTGTACC+TGG | + | chr4_3:12622825-12622844 | Msa0630660:CDS | 65.0% | |
| GCGTCACCCAGGTACAACGC+TGG | - | chr4_3:12622835-12622854 | None:intergenic | 65.0% | |
| CCGGCCAGAACCTCACAACC+AGG | + | chr4_3:12623950-12623969 | Msa0630660:CDS | 65.0% | |
| GTTCCTGTGGGCCTTGCCCT+CGG | + | chr4_3:12624763-12624782 | Msa0630660:CDS | 65.0% | |
| TATCCGAGGGCAAGGCCCAC+AGG | - | chr4_3:12624769-12624788 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 12621296 | 12625095 | 12621296 | ID=Msa0630660;Name=Msa0630660 |
| chr4_3 | mRNA | 12621296 | 12625095 | 12621296 | ID=Msa0630660-mRNA-1;Parent=Msa0630660;Name=Msa0630660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.92|1|1|1|13|186|520 |
| chr4_3 | exon | 12621296 | 12621544 | 12621296 | ID=Msa0630660-mRNA-1:exon:3692;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12621815 | 12621873 | 12621815 | ID=Msa0630660-mRNA-1:exon:3693;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12621986 | 12622052 | 12621986 | ID=Msa0630660-mRNA-1:exon:3694;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12622169 | 12622498 | 12622169 | ID=Msa0630660-mRNA-1:exon:3695;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12622614 | 12622682 | 12622614 | ID=Msa0630660-mRNA-1:exon:3696;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12622787 | 12622873 | 12622787 | ID=Msa0630660-mRNA-1:exon:3697;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12622972 | 12623059 | 12622972 | ID=Msa0630660-mRNA-1:exon:3698;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12623378 | 12623496 | 12623378 | ID=Msa0630660-mRNA-1:exon:3699;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12623585 | 12623686 | 12623585 | ID=Msa0630660-mRNA-1:exon:3700;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12623767 | 12623810 | 12623767 | ID=Msa0630660-mRNA-1:exon:3701;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12623902 | 12623971 | 12623902 | ID=Msa0630660-mRNA-1:exon:3702;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12624269 | 12624372 | 12624269 | ID=Msa0630660-mRNA-1:exon:3703;Parent=Msa0630660-mRNA-1 |
| chr4_3 | exon | 12624735 | 12625095 | 12624735 | ID=Msa0630660-mRNA-1:exon:3704;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12621296 | 12621544 | 12621296 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12621815 | 12621873 | 12621815 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12621986 | 12622052 | 12621986 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12622169 | 12622498 | 12622169 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12622614 | 12622682 | 12622614 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12622787 | 12622873 | 12622787 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12622972 | 12623059 | 12622972 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12623378 | 12623496 | 12623378 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12623585 | 12623686 | 12623585 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12623767 | 12623810 | 12623767 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12623902 | 12623971 | 12623902 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12624269 | 12624372 | 12624269 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | CDS | 12624735 | 12624909 | 12624735 | ID=Msa0630660-mRNA-1:cds;Parent=Msa0630660-mRNA-1 |
| chr4_3 | three_prime_UTR | 12624910 | 12625095 | 12624910 | ID=Msa0630660-mRNA-1:three_prime_utr;Parent=Msa0630660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
