Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838750 | XP_003612312.1 | 95.255 | 843 | 31 | 2 | 1 | 842 | 1 | 835 | 0.0 | 1648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838750 | sp|C0SQ89|CMT3_ORYSJ | 55.639 | 798 | 310 | 13 | 42 | 823 | 110 | 879 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838750 | G7K003 | 95.255 | 843 | 31 | 2 | 1 | 842 | 1 | 835 | 0.0 | 1648 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0838750 | 0.819297 | 1.250409e-52 | -8.615850e-47 |
| Msa0035140 | Msa0838750 | 0.813201 | 2.885504e-51 | -8.615850e-47 |
| Msa0037740 | Msa0838750 | 0.816539 | 5.250081e-52 | -8.615850e-47 |
| Msa0075530 | Msa0838750 | 0.812348 | 4.435586e-51 | -8.615850e-47 |
| Msa0115550 | Msa0838750 | 0.832007 | 1.208215e-55 | -8.615850e-47 |
| Msa0606100 | Msa0838750 | 0.819483 | 1.134267e-52 | -8.615850e-47 |
| Msa0619080 | Msa0838750 | 0.813832 | 2.096763e-51 | -8.615850e-47 |
| Msa0621710 | Msa0838750 | 0.827240 | 1.745007e-54 | -8.615850e-47 |
| Msa0647050 | Msa0838750 | 0.819679 | 1.023454e-52 | -8.615850e-47 |
| Msa0668900 | Msa0838750 | 0.816058 | 6.725845e-52 | -8.615850e-47 |
| Msa0709440 | Msa0838750 | 0.806811 | 6.860636e-50 | -8.615850e-47 |
| Msa0717830 | Msa0838750 | 0.843923 | 1.039110e-58 | -8.615850e-47 |
| Msa0758590 | Msa0838750 | 0.842816 | 2.052071e-58 | -8.615850e-47 |
| Msa0773630 | Msa0838750 | 0.813749 | 2.186521e-51 | -8.615850e-47 |
| Msa0780910 | Msa0838750 | 0.803726 | 3.037346e-49 | -8.615850e-47 |
| Msa0783930 | Msa0838750 | 0.800595 | 1.339086e-48 | -8.615850e-47 |
| Msa0800660 | Msa0838750 | 0.842184 | 3.020091e-58 | -8.615850e-47 |
| Msa0818880 | Msa0838750 | 0.837737 | 4.355600e-57 | -8.615850e-47 |
| Msa0838750 | Msa0863620 | 0.818680 | 1.727286e-52 | -8.615850e-47 |
| Msa0838750 | Msa0900760 | 0.856294 | 3.546164e-62 | -8.615850e-47 |
| Msa0838750 | Msa0909760 | 0.846000 | 2.859305e-59 | -8.615850e-47 |
| Msa0838750 | Msa0931590 | 0.831468 | 1.640823e-55 | -8.615850e-47 |
| Msa0838750 | Msa1033920 | 0.807087 | 5.997860e-50 | -8.615850e-47 |
| Msa0838750 | Msa1042880 | 0.836593 | 8.546634e-57 | -8.615850e-47 |
| Msa0838750 | Msa1075520 | 0.805123 | 1.554257e-49 | -8.615850e-47 |
| Msa0838750 | Msa1084530 | 0.812532 | 4.044034e-51 | -8.615850e-47 |
| Msa0838750 | Msa1114630 | 0.805260 | 1.454459e-49 | -8.615850e-47 |
| Msa0838750 | Msa1116660 | 0.812828 | 3.483662e-51 | -8.615850e-47 |
| Msa0838750 | Msa1125820 | 0.813404 | 2.603965e-51 | -8.615850e-47 |
| Msa0838750 | Msa1125990 | 0.811500 | 6.787058e-51 | -8.615850e-47 |
| Msa0838750 | Msa1127470 | 0.802775 | 4.779804e-49 | -8.615850e-47 |
| Msa0838750 | Msa1139050 | 0.819312 | 1.240551e-52 | -8.615850e-47 |
| Msa0838750 | Msa1162880 | 0.817670 | 2.922827e-52 | -8.615850e-47 |
| Msa0838750 | Msa1171290 | 0.802349 | 5.853296e-49 | -8.615850e-47 |
| Msa0838750 | Msa1244240 | 0.808672 | 2.760555e-50 | -8.615850e-47 |
| Msa0838750 | Msa1254540 | 0.806974 | 6.339464e-50 | -8.615850e-47 |
| Msa0838750 | Msa1300460 | 0.802592 | 5.214765e-49 | -8.615850e-47 |
| Msa0838750 | Msa1362130 | 0.800108 | 1.682366e-48 | -8.615850e-47 |
| Msa0838750 | Msa1374790 | 0.802583 | 5.237355e-49 | -8.615850e-47 |
| Msa0838750 | Msa1381180 | 0.819130 | 1.364673e-52 | -8.615850e-47 |
| Msa0838750 | Msa1445120 | 0.822036 | 2.935679e-53 | -8.615850e-47 |
| Msa0838750 | Msa1447170 | 0.830145 | 3.462304e-55 | -8.615850e-47 |
| Msa0838750 | Msa1450190 | 0.803341 | 3.650794e-49 | -8.615850e-47 |
| Msa0838750 | Msa1451820 | 0.801633 | 8.213722e-49 | -8.615850e-47 |
| Msa0140380 | Msa0838750 | 0.804009 | 2.653186e-49 | -8.615850e-47 |
| Msa0140730 | Msa0838750 | 0.817825 | 2.697512e-52 | -8.615850e-47 |
| Msa0159590 | Msa0838750 | 0.810704 | 1.009653e-50 | -8.615850e-47 |
| Msa0165830 | Msa0838750 | 0.801017 | 1.098113e-48 | -8.615850e-47 |
| Msa0233070 | Msa0838750 | 0.820436 | 6.867098e-53 | -8.615850e-47 |
| Msa0380710 | Msa0838750 | 0.803772 | 2.972038e-49 | -8.615850e-47 |
| Msa0383000 | Msa0838750 | 0.803995 | 2.670606e-49 | -8.615850e-47 |
| Msa0385890 | Msa0838750 | 0.813084 | 3.061024e-51 | -8.615850e-47 |
| Msa0430000 | Msa0838750 | 0.818007 | 2.454029e-52 | -8.615850e-47 |
| Msa0432010 | Msa0838750 | 0.800175 | 1.630276e-48 | -8.615850e-47 |
| Msa0433150 | Msa0838750 | 0.805755 | 1.145257e-49 | -8.615850e-47 |
| Msa0476280 | Msa0838750 | 0.818011 | 2.448134e-52 | -8.615850e-47 |
| Msa0481890 | Msa0838750 | 0.803980 | 2.690256e-49 | -8.615850e-47 |
| Msa0293040 | Msa0838750 | 0.817677 | 2.913006e-52 | -8.615850e-47 |
| Msa0484570 | Msa0838750 | 0.817858 | 2.651815e-52 | -8.615850e-47 |
| Msa0500570 | Msa0838750 | 0.830064 | 3.623511e-55 | -8.615850e-47 |
| Msa0561560 | Msa0838750 | 0.801006 | 1.103458e-48 | -8.615850e-47 |
| Msa0571620 | Msa0838750 | 0.808931 | 2.429799e-50 | -8.615850e-47 |
| Msa0580200 | Msa0838750 | 0.800827 | 1.200461e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838750 | MtrunA17_Chr5g0406641 | 95.255 | 843 | 31 | 2 | 1 | 842 | 1 | 835 | 0.0 | 1648 |
| Msa0838750 | MtrunA17_Chr6g0484831 | 94.543 | 843 | 38 | 1 | 1 | 843 | 1 | 835 | 0.0 | 1617 |
| Msa0838750 | MtrunA17_Chr7g0215341 | 89.087 | 843 | 76 | 3 | 1 | 843 | 1 | 827 | 0.0 | 1503 |
| Msa0838750 | MtrunA17_Chr4g0007641 | 79.508 | 854 | 153 | 6 | 1 | 843 | 1 | 843 | 0.0 | 1378 |
| Msa0838750 | MtrunA17_Chr6g0464681 | 68.415 | 877 | 192 | 9 | 1 | 843 | 1 | 826 | 0.0 | 1174 |
| Msa0838750 | MtrunA17_Chr6g0486931 | 52.850 | 842 | 362 | 11 | 9 | 827 | 88 | 917 | 0.0 | 875 |
| Msa0838750 | MtrunA17_Chr8g0369361 | 50.000 | 782 | 360 | 10 | 60 | 826 | 9 | 774 | 0.0 | 780 |
| Msa0838750 | MtrunA17_Chr5g0427891 | 57.265 | 351 | 141 | 2 | 477 | 827 | 1 | 342 | 1.51e-135 | 407 |
| Msa0838750 | MtrunA17_Chr2g0302601 | 33.684 | 380 | 208 | 8 | 437 | 810 | 1215 | 1556 | 1.66e-56 | 211 |
| Msa0838750 | MtrunA17_Chr6g0477371 | 33.684 | 380 | 208 | 8 | 437 | 810 | 1206 | 1547 | 4.04e-55 | 207 |
| Msa0838750 | MtrunA17_Chr4g0017221 | 33.421 | 380 | 209 | 8 | 437 | 810 | 1190 | 1531 | 1.89e-54 | 205 |
| Msa0838750 | MtrunA17_Chr8g0364091 | 46.739 | 184 | 86 | 6 | 121 | 293 | 30 | 212 | 6.07e-41 | 150 |
| Msa0838750 | MtrunA17_Chr8g0364111 | 74.242 | 66 | 17 | 0 | 761 | 826 | 3 | 68 | 1.21e-27 | 107 |
| Msa0838750 | MtrunA17_Chr5g0427871 | 48.077 | 104 | 45 | 2 | 60 | 154 | 38 | 141 | 2.04e-23 | 97.1 |
| Msa0838750 | MtrunA17_Chr5g0427881 | 60.000 | 65 | 26 | 0 | 388 | 452 | 39 | 103 | 3.90e-22 | 92.0 |
| Msa0838750 | MtrunA17_Chr3g0087051 | 36.196 | 163 | 84 | 5 | 654 | 810 | 2 | 150 | 2.08e-20 | 89.0 |
| Msa0838750 | MtrunA17_Chr2g0306841 | 35.417 | 96 | 54 | 2 | 552 | 647 | 15 | 102 | 1.98e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838750 | AT1G69770.1 | 52.302 | 847 | 357 | 13 | 1 | 823 | 1 | 824 | 0.0 | 831 |
| Msa0838750 | AT1G80740.1 | 50.429 | 815 | 346 | 10 | 43 | 830 | 2 | 785 | 0.0 | 811 |
| Msa0838750 | AT4G19020.1 | 50.641 | 780 | 355 | 7 | 58 | 826 | 521 | 1281 | 0.0 | 797 |
| Msa0838750 | AT4G19020.2 | 50.641 | 780 | 355 | 7 | 58 | 826 | 473 | 1233 | 0.0 | 797 |
| Msa0838750 | AT4G14140.3 | 35.526 | 380 | 195 | 10 | 433 | 803 | 1164 | 1502 | 3.10e-57 | 214 |
| Msa0838750 | AT4G14140.1 | 35.526 | 380 | 195 | 10 | 433 | 803 | 1164 | 1502 | 3.10e-57 | 214 |
| Msa0838750 | AT4G14140.2 | 35.526 | 380 | 195 | 10 | 433 | 803 | 1190 | 1528 | 4.16e-57 | 214 |
| Msa0838750 | AT4G08990.1 | 35.544 | 377 | 199 | 10 | 433 | 803 | 1157 | 1495 | 9.91e-56 | 209 |
| Msa0838750 | AT4G13610.1 | 32.817 | 387 | 200 | 10 | 433 | 811 | 1066 | 1400 | 4.92e-53 | 201 |
| Msa0838750 | AT5G49160.1 | 33.333 | 387 | 210 | 10 | 433 | 811 | 1179 | 1525 | 7.46e-52 | 197 |
| Msa0838750 | AT5G49160.2 | 33.333 | 387 | 210 | 10 | 433 | 811 | 1091 | 1437 | 7.83e-52 | 197 |
Find 206 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTTGCTGGTGGGTTTC+TGG | 0.008640 | 5_4:-13223859 | Msa0838750:CDS |
| TGCTTTGGAGCGTCTATTTC+TGG | 0.092776 | 5_4:-13225055 | Msa0838750:CDS |
| ACTTTACTGGATTTGTATTC+TGG | 0.102309 | 5_4:-13225103 | Msa0838750:CDS |
| CCAAAACATACGTGTGTTTC+TGG | 0.107116 | 5_4:+13224860 | None:intergenic |
| ATGAAAATGAAATCAAAATA+AGG | 0.210448 | 5_4:+13221122 | None:intergenic |
| GAAGCTTGAGTGGACTTTAC+TGG | 0.259994 | 5_4:-13225116 | Msa0838750:CDS |
| AGATATGATACCTTCTTCTT+TGG | 0.269464 | 5_4:+13222679 | None:intergenic |
| TTCCAGGGCCTGAATATTCT+TGG | 0.283452 | 5_4:+13221092 | None:intergenic |
| TAGACAACTTGGGTACTTAA+AGG | 0.288833 | 5_4:+13221218 | None:intergenic |
| CATTCGAGCTTGATAATTCA+TGG | 0.289914 | 5_4:+13223809 | None:intergenic |
| ATAGAAAACTCACTCGTTCT+TGG | 0.312461 | 5_4:+13226797 | None:intergenic |
| AGGAACGACGTCGTCTTGTT+TGG | 0.324105 | 5_4:+13227004 | None:intergenic |
| TGAAGTCTCGCTTTCTATTA+TGG | 0.324543 | 5_4:+13225225 | None:intergenic |
| AAATTTGCTGGTGGGTTTCT+GGG | 0.327523 | 5_4:-13223858 | Msa0838750:CDS |
| CCAGACTGCTATAAGCTTTG+TGG | 0.329709 | 5_4:-13221863 | Msa0838750:CDS |
| TTCAATATTTACAGTGTCTT+CGG | 0.334695 | 5_4:+13225735 | None:intergenic |
| AGTGCTTGTTAAAGAAAATA+AGG | 0.345591 | 5_4:-13222554 | Msa0838750:CDS |
| ATCCTTTAGATTGTTTAGTT+AGG | 0.347736 | 5_4:-13225571 | Msa0838750:CDS |
| CATATGGCCTTCCTCAATTT+CGG | 0.349601 | 5_4:-13223767 | Msa0838750:CDS |
| CCACCTTGTCAAGGTGTTAG+TGG | 0.350266 | 5_4:-13224011 | Msa0838750:CDS |
| CTAAGAACTCTGTCTTGTTC+TGG | 0.352167 | 5_4:+13221917 | None:intergenic |
| ATGTCCACTGGCCTTTGCTT+TGG | 0.354478 | 5_4:-13225070 | Msa0838750:CDS |
| ACAAATGTCATTGCATAATC+TGG | 0.361080 | 5_4:+13222396 | None:intergenic |
| CTTTACTGGATTTGTATTCT+GGG | 0.362248 | 5_4:-13225102 | Msa0838750:CDS |
| TTAGTGGTTTCAATCGCTTC+AGG | 0.364770 | 5_4:-13223995 | Msa0838750:CDS |
| ATCCTCAAGGTTTAATGCCT+TGG | 0.368420 | 5_4:+13223379 | None:intergenic |
| GTTCCTGTGGCCCTTGCCCT+TGG | 0.369274 | 5_4:-13221300 | Msa0838750:CDS |
| GGGCTCCCATGTATCATAAC+TGG | 0.370498 | 5_4:+13224380 | None:intergenic |
| ACATTCATTCATACAATTCC+AGG | 0.376011 | 5_4:+13221076 | None:intergenic |
| TTCGCTTTCTTTCTTCTAGA+AGG | 0.383626 | 5_4:+13226909 | None:intergenic |
| TTAGCTTCATCGGCCGGAAT+AGG | 0.388189 | 5_4:+13226843 | None:intergenic |
| CACTGAGCGGGTTGAAGTGC+CGG | 0.388194 | 5_4:-13227225 | Msa0838750:five_prime_UTR |
| TTCCTAACTAAACAATCTAA+AGG | 0.391710 | 5_4:+13225569 | None:intergenic |
| TCTTCTTCAACGGGATTAAC+CGG | 0.395326 | 5_4:+13226948 | None:intergenic |
| AACACATACCTCTGTTTGAC+AGG | 0.396020 | 5_4:+13221839 | None:intergenic |
| TCCCATCAACCTTCGCTTCA+CGG | 0.396234 | 5_4:+13226653 | None:intergenic |
| GAAAGAGTGCATCTAAAATC+TGG | 0.397497 | 5_4:-13222511 | Msa0838750:CDS |
| CTTCGTTGGAGAACCTATTC+CGG | 0.399606 | 5_4:-13226856 | Msa0838750:CDS |
| AGACAACTTGGGTACTTAAA+GGG | 0.412259 | 5_4:+13221219 | None:intergenic |
| TGAAGGAGAAGAGGAAAAGC+GGG | 0.417198 | 5_4:+13227155 | None:intergenic |
| TGAAAATGAAATCAAAATAA+GGG | 0.417268 | 5_4:+13221123 | None:intergenic |
| TCTAAAATCTGGAAAGCCTT+TGG | 0.417831 | 5_4:-13222500 | Msa0838750:intron |
| TCAACACTTTCAAGTGAATC+CGG | 0.418845 | 5_4:-13225205 | Msa0838750:CDS |
| AAGGGCCGAGCCTCATAATC+AGG | 0.420289 | 5_4:-13222216 | Msa0838750:intron |
| TGTTAGGAGAAGAGAGAAGA+AGG | 0.420899 | 5_4:+13227092 | None:intergenic |
| TTAGATTCTTTAATTTGAGT+TGG | 0.421419 | 5_4:+13225139 | None:intergenic |
| CATCAACTACATCTAAAGAA+TGG | 0.427040 | 5_4:+13221193 | None:intergenic |
| ATCCGACTCTGAGGTATTTG+AGG | 0.427400 | 5_4:-13224577 | Msa0838750:CDS |
| ATGATGGCTGCAGGGTCATA+TGG | 0.428980 | 5_4:-13223783 | Msa0838750:CDS |
| CTTGCCCTTGGATACACATT+CGG | 0.430430 | 5_4:-13221288 | Msa0838750:CDS |
| AGCCAAGAATATTCAGGCCC+TGG | 0.431422 | 5_4:-13221094 | Msa0838750:three_prime_UTR |
| TACCGTGAAGCGAAGGTTGA+TGG | 0.431767 | 5_4:-13226655 | Msa0838750:CDS |
| GTAAAATATTGTTCTTCCTC+AGG | 0.432366 | 5_4:+13225778 | None:intergenic |
| TTCTTATCTTTCAGGTGCAT+TGG | 0.437517 | 5_4:-13224416 | Msa0838750:intron |
| TATCTTTCAGGTGCATTGGA+AGG | 0.438453 | 5_4:-13224412 | Msa0838750:intron |
| ATGTTAGCGAAAGTTAAATA+TGG | 0.438654 | 5_4:+13225362 | None:intergenic |
| GAAACCAGTTCTTCTTCAAC+GGG | 0.439261 | 5_4:+13226939 | None:intergenic |
| GCTGAACACAACAGGCCATT+TGG | 0.441659 | 5_4:-13222278 | Msa0838750:intron |
| TAATCCCGTTGAAGAAGAAC+TGG | 0.445031 | 5_4:-13226943 | Msa0838750:CDS |
| ATGAAGGAGAAGAGGAAAAG+CGG | 0.446150 | 5_4:+13227154 | None:intergenic |
| TATCCAAGGGCAAGGGCCAC+AGG | 0.450914 | 5_4:+13221297 | None:intergenic |
| AAAGAATGGGCTAGACAACT+TGG | 0.454064 | 5_4:+13221207 | None:intergenic |
| ATCAACTACATCTAAAGAAT+GGG | 0.455075 | 5_4:+13221194 | None:intergenic |
| TAAAGAAAATAAGGTGGAAT+GGG | 0.455324 | 5_4:-13222545 | Msa0838750:CDS |
| TTTCTGGGGCGTTATGCTGT+GGG | 0.456388 | 5_4:-13223843 | Msa0838750:CDS |
| CTGGATTTGTATTCTGGGTG+TGG | 0.458568 | 5_4:-13225097 | Msa0838750:CDS |
| ACAGATTCTGATTTGAATGC+TGG | 0.467576 | 5_4:-13224645 | Msa0838750:CDS |
| ACAGGCCATTTGGTCGACTT+TGG | 0.470283 | 5_4:-13222268 | Msa0838750:intron |
| AATGTGTGTGCAGGTGATTA+AGG | 0.470442 | 5_4:-13225651 | Msa0838750:intron |
| CGAATGGGAATGATGGCTGC+AGG | 0.476134 | 5_4:-13223792 | Msa0838750:CDS |
| TTCGGCTCTGTAAAACCATT+GGG | 0.476357 | 5_4:+13225753 | None:intergenic |
| CAAACAATAACCTGATTATG+AGG | 0.477324 | 5_4:+13222206 | None:intergenic |
| CAAAACATACGTGTGTTTCT+GGG | 0.479283 | 5_4:+13224861 | None:intergenic |
| CCACAAAGCTTATAGCAGTC+TGG | 0.481850 | 5_4:+13221863 | None:intergenic |
| ACGATTCCAGTTATGATACA+TGG | 0.482110 | 5_4:-13224386 | Msa0838750:CDS |
| CTTATCAGTTGCACGGACAT+TGG | 0.484986 | 5_4:+13225180 | None:intergenic |
| GTTTCTGGGGCGTTATGCTG+TGG | 0.485630 | 5_4:-13223844 | Msa0838750:CDS |
| CTCACTCGTTCTTGGTGTAT+CGG | 0.487063 | 5_4:+13226805 | None:intergenic |
| CGAGAGAATGCAAGGCTACA+AGG | 0.488910 | 5_4:-13221890 | Msa0838750:CDS |
| AGCGATGATGAAAGGAGCTA+TGG | 0.490074 | 5_4:-13223220 | Msa0838750:CDS |
| AAAGCGATTATTATAAATGA+AGG | 0.491343 | 5_4:+13227138 | None:intergenic |
| TCCGTGCAACTGATAAGAAA+GGG | 0.491671 | 5_4:-13225174 | Msa0838750:CDS |
| GTCTCGCTTTCTATTATGGC+AGG | 0.492921 | 5_4:+13225229 | None:intergenic |
| TTGCCACATTCCAAAGAAGA+AGG | 0.494632 | 5_4:-13222689 | Msa0838750:intron |
| TCCGACGATGCATTCTTCGT+TGG | 0.497844 | 5_4:-13226870 | Msa0838750:CDS |
| TTAGATGTAGTTGATGATGA+TGG | 0.499460 | 5_4:-13221186 | Msa0838750:CDS |
| CTTCGGCTCTGTAAAACCAT+TGG | 0.499873 | 5_4:+13225752 | None:intergenic |
| GCCATTTGGTCGACTTTGGT+GGG | 0.501789 | 5_4:-13222264 | Msa0838750:CDS |
| ATGAATTATCAAGCTCGAAT+GGG | 0.503860 | 5_4:-13223807 | Msa0838750:CDS |
| CTTACTTTAAAATAAAGTCC+TGG | 0.505726 | 5_4:+13224504 | None:intergenic |
| TTAAAGAAAATAAGGTGGAA+TGG | 0.507503 | 5_4:-13222546 | Msa0838750:CDS |
| GGGTGTGGAGCTATGTCCAC+TGG | 0.507514 | 5_4:-13225082 | Msa0838750:CDS |
| AAAGAAAGCGAAGCAATCTT+CGG | 0.511714 | 5_4:-13226898 | Msa0838750:CDS |
| TTATGCTGTGGGCCGTCTAG+TGG | 0.511914 | 5_4:-13223832 | Msa0838750:CDS |
| CATGAATTATCAAGCTCGAA+TGG | 0.511989 | 5_4:-13223808 | Msa0838750:CDS |
| GTCCGTGCAACTGATAAGAA+AGG | 0.513074 | 5_4:-13225175 | Msa0838750:CDS |
| CCCCTTTCTTATCAGTTGCA+CGG | 0.513311 | 5_4:+13225173 | None:intergenic |
| CACTAATGAAAATTGTCAGC+TGG | 0.514015 | 5_4:-13223402 | Msa0838750:CDS |
| ACATTCGGTTTAGCAATTCA+AGG | 0.515197 | 5_4:-13221273 | Msa0838750:CDS |
| GTTCTTACTTCAAACTCAGT+GGG | 0.517126 | 5_4:+13223545 | None:intergenic |
| GGCCATTTGGTCGACTTTGG+TGG | 0.517220 | 5_4:-13222265 | Msa0838750:CDS |
| ATCTTTCAGGTGCATTGGAA+GGG | 0.520919 | 5_4:-13224411 | Msa0838750:intron |
| AAAACACGCATCCGAAATTG+AGG | 0.524141 | 5_4:+13223756 | None:intergenic |
| TCATCGGTATTTAATTTCAA+AGG | 0.524186 | 5_4:+13222724 | None:intergenic |
| TTCTCCATCAGAACATACTT+AGG | 0.525692 | 5_4:+13223897 | None:intergenic |
| TGTGACGAGTTTGTACTGAA+TGG | 0.527233 | 5_4:-13224678 | Msa0838750:CDS |
| TCCCACCAAAGTCGACCAAA+TGG | 0.528934 | 5_4:+13222263 | None:intergenic |
| CCCCACAAATAAAATCAGCT+TGG | 0.529314 | 5_4:+13224036 | None:intergenic |
| TAATGCAGGTACATGCAAGT+TGG | 0.531949 | 5_4:-13221336 | Msa0838750:intron |
| GATCATTAATTGCATCCTCA+AGG | 0.533889 | 5_4:+13223366 | None:intergenic |
| GAACTCTGTCTTGTTCTGGA+TGG | 0.534548 | 5_4:+13221921 | None:intergenic |
| TTCTGGCATTAAGCTTGTGA+CGG | 0.535368 | 5_4:-13225038 | Msa0838750:intron |
| TGAAAATTGTCAGCTGGCCA+AGG | 0.535950 | 5_4:-13223396 | Msa0838750:CDS |
| ATACCTTCTTCTTTGGAATG+TGG | 0.536325 | 5_4:+13222686 | None:intergenic |
| GAGTGAGGATGAAAGTTTGA+AGG | 0.536508 | 5_4:-13226689 | Msa0838750:CDS |
| TTTAAGTCTCCTAAAAGAGT+GGG | 0.536611 | 5_4:-13224709 | Msa0838750:CDS |
| GAAGCCTAAGTATGTTCTGA+TGG | 0.538220 | 5_4:-13223901 | Msa0838750:CDS |
| GGCAAACTTCAGGGACCTCA+AGG | 0.539453 | 5_4:-13222578 | Msa0838750:CDS |
| CTCGATACAACCTCATGAGT+TGG | 0.540046 | 5_4:+13223578 | None:intergenic |
| ACCGTGAAGCGAAGGTTGAT+GGG | 0.541235 | 5_4:-13226654 | Msa0838750:CDS |
| AGAAACCAGTTCTTCTTCAA+CGG | 0.541839 | 5_4:+13226938 | None:intergenic |
| GGATTACATCGCTACGATTG+TGG | 0.542274 | 5_4:-13225815 | Msa0838750:CDS |
| TATATCAGATTAAAGAGAAG+TGG | 0.544554 | 5_4:-13223169 | Msa0838750:intron |
| TGACTTGAAGAAATGGGCTG+TGG | 0.544856 | 5_4:-13224924 | Msa0838750:intron |
| ATGCAATGACATTTGTTCGT+GGG | 0.548444 | 5_4:-13222389 | Msa0838750:CDS |
| AGTTGCACGGACATTGGACC+CGG | 0.551087 | 5_4:+13225186 | None:intergenic |
| ACATTTAACAAACACTGAGC+GGG | 0.551731 | 5_4:-13227237 | None:intergenic |
| AACATACCTCAAGCCCTCGA+TGG | 0.552579 | 5_4:+13224359 | None:intergenic |
| TCAAGCTCGAATGGGAATGA+TGG | 0.553083 | 5_4:-13223799 | Msa0838750:CDS |
| AGACTACTCTCTATCTGCTA+TGG | 0.553129 | 5_4:-13224549 | Msa0838750:CDS |
| AGATGCACTCTTTCAACAGA+GGG | 0.553687 | 5_4:+13222520 | None:intergenic |
| CTAAACCGAATGTGTATCCA+AGG | 0.555284 | 5_4:+13221283 | None:intergenic |
| TTGTGTCTACTGTTGTAACA+AGG | 0.557248 | 5_4:-13222235 | Msa0838750:CDS |
| GCAATTCAAGGACTCTCTGA+TGG | 0.560406 | 5_4:-13221261 | Msa0838750:CDS |
| GGGAGCCCATCGAGGGCTTG+AGG | 0.565566 | 5_4:-13224365 | Msa0838750:intron |
| GTTTCACTACCGTGAAGCGA+AGG | 0.565732 | 5_4:-13226662 | Msa0838750:CDS |
| CGAATGTGTATCCAAGGGCA+AGG | 0.566219 | 5_4:+13221289 | None:intergenic |
| ACATACCTCAAGCCCTCGAT+GGG | 0.566713 | 5_4:+13224360 | None:intergenic |
| TCGTTCCTCGTTCTTCTCAA+CGG | 0.569879 | 5_4:-13226989 | Msa0838750:CDS |
| TATTATAAATGAAGGAGAAG+AGG | 0.570997 | 5_4:+13227146 | None:intergenic |
| AAGAATCTAAGAAGCTTGAG+TGG | 0.574067 | 5_4:-13225126 | Msa0838750:CDS |
| GTGGTGAGACTTACAGGAAG+AGG | 0.574419 | 5_4:+13224160 | None:intergenic |
| ATGATGATAGCGATGATGAA+AGG | 0.575051 | 5_4:-13223228 | Msa0838750:CDS |
| AATTTGCTGGTGGGTTTCTG+GGG | 0.576721 | 5_4:-13223857 | Msa0838750:CDS |
| GTGGTATGCTGTATGATCAC+AGG | 0.577358 | 5_4:-13222747 | Msa0838750:CDS |
| CATTCATTCATACAATTCCA+GGG | 0.577583 | 5_4:+13221077 | None:intergenic |
| CAACACTTTCAAGTGAATCC+GGG | 0.580699 | 5_4:-13225204 | Msa0838750:CDS |
| ACTGAGCGGGTTGAAGTGCC+GGG | 0.581655 | 5_4:-13227224 | Msa0838750:five_prime_UTR |
| GGAAAAGACATGGATTAATG+AGG | 0.584597 | 5_4:+13221147 | None:intergenic |
| CGCTCCAAAGCAAAGGCCAG+TGG | 0.588179 | 5_4:+13225066 | None:intergenic |
| AAATGAAATCAAAATAAGGG+TGG | 0.588623 | 5_4:+13221126 | None:intergenic |
| GACAACTTGGGTACTTAAAG+GGG | 0.589664 | 5_4:+13221220 | None:intergenic |
| TTAGCATTCGAGAGAATGCA+AGG | 0.591436 | 5_4:-13221898 | Msa0838750:CDS |
| CTTTAACAAGCACTCCCTTG+AGG | 0.595401 | 5_4:+13222563 | None:intergenic |
| GCAAACTCTCTCATAGTCAT+CGG | 0.597622 | 5_4:+13222708 | None:intergenic |
| CGATTCCAGTTATGATACAT+GGG | 0.597731 | 5_4:-13224385 | Msa0838750:CDS |
| AAATAGACGCTCCAAAGCAA+AGG | 0.600764 | 5_4:+13225059 | None:intergenic |
| CATATATACATACTTAGAAG+AGG | 0.600894 | 5_4:+13222365 | None:intergenic |
| GCGATGATGAAAGGAGCTAT+GGG | 0.602155 | 5_4:-13223219 | Msa0838750:CDS |
| AAGCAATGGCCTTACTTCAG+TGG | 0.602447 | 5_4:+13223716 | None:intergenic |
| ACTTTCGCTAACATTGACAA+TGG | 0.603027 | 5_4:-13225353 | Msa0838750:intron |
| AAATGCAGTTGCTGTTCCTG+TGG | 0.603453 | 5_4:-13221313 | Msa0838750:CDS |
| AACCTCAAATACCTCAGAGT+CGG | 0.604058 | 5_4:+13224575 | None:intergenic |
| GGAGGATAATGCTTATGTCA+AGG | 0.604274 | 5_4:-13226617 | Msa0838750:intron |
| AGAAGCTGATGATGAAGCGA+TGG | 0.605443 | 5_4:-13224607 | Msa0838750:CDS |
| AAATAAGGGTGGAAAAGACA+TGG | 0.607414 | 5_4:+13221137 | None:intergenic |
| TGCAGGTGATTAAGGACCAT+GGG | 0.609611 | 5_4:-13225643 | Msa0838750:intron |
| GATAATTCATGGCCACTAGA+CGG | 0.613254 | 5_4:+13223820 | None:intergenic |
| GATACATGGGAGCCCATCGA+GGG | 0.613692 | 5_4:-13224372 | Msa0838750:CDS |
| GCTTGTTAAAGAAAATAAGG+TGG | 0.616647 | 5_4:-13222551 | Msa0838750:CDS |
| AATAACCTGATTATGAGGCT+CGG | 0.618623 | 5_4:+13222211 | None:intergenic |
| TATGCAATGACATTTGTTCG+TGG | 0.619188 | 5_4:-13222390 | Msa0838750:CDS |
| TCCAACGAAGAATGCATCGT+CGG | 0.619858 | 5_4:+13226869 | None:intergenic |
| TGATCATACAGCATACCACT+TGG | 0.622966 | 5_4:+13222751 | None:intergenic |
| GAATGCTGGCAAAGAAGCTG+AGG | 0.624902 | 5_4:-13224631 | Msa0838750:CDS |
| AAGAATGGGCTAGACAACTT+GGG | 0.629534 | 5_4:+13221208 | None:intergenic |
| CACGCATCCGAAATTGAGGA+AGG | 0.629581 | 5_4:+13223760 | None:intergenic |
| AGTTCTTACTTCAAACTCAG+TGG | 0.631096 | 5_4:+13223544 | None:intergenic |
| TGAGTTGGTAACGGATATGA+CGG | 0.631314 | 5_4:+13223593 | None:intergenic |
| AACATTTAACAAACACTGAG+CGG | 0.631978 | 5_4:-13227238 | None:intergenic |
| TAGATGCACTCTTTCAACAG+AGG | 0.633772 | 5_4:+13222519 | None:intergenic |
| GAATGGGAATGATGGCTGCA+GGG | 0.641368 | 5_4:-13223791 | Msa0838750:CDS |
| GGATAATTCATCCGACTCTG+AGG | 0.644647 | 5_4:-13224586 | Msa0838750:CDS |
| ACAACCTCATGAGTTGGTAA+CGG | 0.650609 | 5_4:+13223584 | None:intergenic |
| GCAAACTTCAGGGACCTCAA+GGG | 0.650920 | 5_4:-13222577 | Msa0838750:CDS |
| GAATGTGTATCCAAGGGCAA+GGG | 0.651696 | 5_4:+13221290 | None:intergenic |
| GGCCAAGGCATTAAACCTTG+AGG | 0.652857 | 5_4:-13223381 | Msa0838750:CDS |
| TGTGTCTACTGTTGTAACAA+GGG | 0.655093 | 5_4:-13222234 | Msa0838750:CDS |
| TTAAAGGGGAGAGTTGTCAA+AGG | 0.658649 | 5_4:+13221234 | None:intergenic |
| GACTCTCAAAGTGCACCAAG+TGG | 0.659799 | 5_4:-13222766 | Msa0838750:CDS |
| TTCTTACTTCAAACTCAGTG+GGG | 0.660921 | 5_4:+13223546 | None:intergenic |
| CCGTGCAACTGATAAGAAAG+GGG | 0.670667 | 5_4:-13225173 | Msa0838750:CDS |
| TCGTTCTTGGTGTATCGGTG+AGG | 0.672316 | 5_4:+13226810 | None:intergenic |
| GTGCAGGTGATTAAGGACCA+TGG | 0.674534 | 5_4:-13225644 | Msa0838750:intron |
| ATATCAAAATAGAAGTCACA+AGG | 0.681018 | 5_4:+13225398 | None:intergenic |
| GATGCACTCTTTCAACAGAG+GGG | 0.682334 | 5_4:+13222521 | None:intergenic |
| ATATCCGTTACCAACTCATG+AGG | 0.683219 | 5_4:-13223588 | Msa0838750:CDS |
| CCACTAACACCTTGACAAGG+TGG | 0.683957 | 5_4:+13224011 | None:intergenic |
| TAAACCGAATGTGTATCCAA+GGG | 0.685117 | 5_4:+13221284 | None:intergenic |
| TGATACATGGGAGCCCATCG+AGG | 0.686118 | 5_4:-13224373 | Msa0838750:CDS |
| TTTGTGGCCCTGTCAAACAG+AGG | 0.688111 | 5_4:-13221847 | Msa0838750:intron |
| ACACATACCTCTGTTTGACA+GGG | 0.690367 | 5_4:+13221840 | None:intergenic |
| TTCTTCCGTTGAGAAGAACG+AGG | 0.699637 | 5_4:+13226984 | None:intergenic |
| GGAGATGTTTGAATCTCCTG+AGG | 0.705054 | 5_4:-13225794 | Msa0838750:CDS |
| TCAAAATAGAAGTCACAAGG+AGG | 0.707483 | 5_4:+13225401 | None:intergenic |
| AAACCACTAACACCTTGACA+AGG | 0.729461 | 5_4:+13224008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTTATTTTTTA+TGG | - | chr5_4:13221790-13221809 | Msa0838750:intron | 0.0% |
| !!! | TTTAAATATTTTTAAATGGA+AGG | - | chr5_4:13224485-13224504 | Msa0838750:intron | 10.0% |
| !! | ATTTATTTGAACAAAAAATA+TGG | - | chr5_4:13227153-13227172 | Msa0838750:five_prime_UTR | 10.0% |
| !!! | TTTTATTTTTTATGGTTCAT+TGG | - | chr5_4:13221798-13221817 | Msa0838750:intron | 15.0% |
| !! | TTTATTTCATGTTGAAAATT+TGG | - | chr5_4:13222123-13222142 | Msa0838750:intron | 15.0% |
| !! | TCAACATTAAATCAAATAAA+AGG | + | chr5_4:13222158-13222177 | None:intergenic | 15.0% |
| !!! | TTTTACTGATTTTATAATCT+TGG | - | chr5_4:13223183-13223202 | Msa0838750:CDS | 15.0% |
| !! | TAATAATTAACTACACAATA+AGG | + | chr5_4:13223667-13223686 | None:intergenic | 15.0% |
| !!! | ATGAAAGATTTTGTTATAAA+TGG | - | chr5_4:13223935-13223954 | Msa0838750:CDS | 15.0% |
| !!! | TTTTGTTATAAATGGATATA+AGG | - | chr5_4:13223943-13223962 | Msa0838750:CDS | 15.0% |
| !! | TGAAAATGAAATCAAAATAA+GGG | + | chr5_4:13227017-13227036 | None:intergenic | 15.0% |
| !! | ATGAAAATGAAATCAAAATA+AGG | + | chr5_4:13227018-13227037 | None:intergenic | 15.0% |
| !!! | ATGATTTAATATTCACATTT+TGG | - | chr5_4:13227110-13227129 | Msa0838750:five_prime_UTR | 15.0% |
| !! | AAAGCGATTATTATAAATGA+AGG | + | chr5_4:13221002-13221021 | None:intergenic | 20.0% |
| !!! | AAGTGCTTTTTTTTTTTGTT+AGG | + | chr5_4:13221064-13221083 | None:intergenic | 20.0% |
| !!! | TGTTGAAAATTTGATGTTTT+AGG | - | chr5_4:13221592-13221611 | Msa0838750:intron | 20.0% |
| !!! | GTTGAAAATTTGATGTTTTA+GGG | - | chr5_4:13221593-13221612 | Msa0838750:intron | 20.0% |
| !!! | TTTGATTCATGTTGAAATTT+TGG | - | chr5_4:13221896-13221915 | Msa0838750:CDS | 20.0% |
| !! | TCAACATTAAATCAAAAGAA+AGG | + | chr5_4:13221931-13221950 | None:intergenic | 20.0% |
| !!! | AATGTTGAAAATTGTGTTTT+TGG | - | chr5_4:13221943-13221962 | Msa0838750:intron | 20.0% |
| !!! | TTGATTTCATGTTGATAATT+TGG | - | chr5_4:13222010-13222029 | Msa0838750:intron | 20.0% |
| !! | TCAACATGATATCAAATAAA+AGG | + | chr5_4:13222045-13222064 | None:intergenic | 20.0% |
| !!! | AATGTTGAAAATTGTGTTTT+AGG | - | chr5_4:13221943-13221962 | Msa0838750:intron | 20.0% |
| !!! | TTAGATTCTTTAATTTGAGT+TGG | + | chr5_4:13223001-13223020 | None:intergenic | 20.0% |
| !!! | TAATTTGCATAATGTTTCTT+TGG | - | chr5_4:13223131-13223150 | Msa0838750:intron | 20.0% |
| !! | CTATAAATTTCTTATCTTTC+AGG | - | chr5_4:13223713-13223732 | Msa0838750:intron | 20.0% |
| !!! | ATAGTCAATATCTTGATAAT+TGG | + | chr5_4:13223804-13223823 | None:intergenic | 20.0% |
| !! | AAAACTAATACTATAAGCAA+TGG | + | chr5_4:13224438-13224457 | None:intergenic | 20.0% |
| !!! | TATATATGTACATCTAGTTT+AGG | - | chr5_4:13225787-13225806 | Msa0838750:CDS | 20.0% |
| !!! | TATACAACATTGTTTTAAAG+AGG | + | chr5_4:13226018-13226037 | None:intergenic | 20.0% |
| !! | ATATGGAAGTTAGTTATAAT+AGG | + | chr5_4:13226557-13226576 | None:intergenic | 20.0% |
| !! | GTGCAATTTAGTAATAAATA+TGG | + | chr5_4:13226574-13226593 | None:intergenic | 20.0% |
| !! | TTAGGTGTAATATTTCTTAT+TGG | - | chr5_4:13226634-13226653 | Msa0838750:CDS | 20.0% |
| ! | TATTATAAATGAAGGAGAAG+AGG | + | chr5_4:13220994-13221013 | None:intergenic | 25.0% |
| !! | AGATTTAAAATTCACTGCTA+TGG | - | chr5_4:13221404-13221423 | Msa0838750:intron | 25.0% |
| !! | GATTTAAAATTCACTGCTAT+GGG | - | chr5_4:13221405-13221424 | Msa0838750:intron | 25.0% |
| !! | TTATTTCTTTGATTGCATGT+TGG | - | chr5_4:13221617-13221636 | Msa0838750:intron | 25.0% |
| !! | TGTTGAGATTTTTCTACTTT+AGG | - | chr5_4:13221674-13221693 | Msa0838750:intron | 25.0% |
| !! | GTTGAGATTTTTCTACTTTA+GGG | - | chr5_4:13221675-13221694 | Msa0838750:intron | 25.0% |
| ! | TATGATTTCGTGTTGAAAAT+TGG | - | chr5_4:13221706-13221725 | Msa0838750:intron | 25.0% |
| ! | ATGATTTCGTGTTGAAAATT+GGG | - | chr5_4:13221707-13221726 | Msa0838750:intron | 25.0% |
| !! | ATGTTGAAAACTGTGTTTTA+TGG | - | chr5_4:13221831-13221850 | Msa0838750:intron | 25.0% |
| ! | TATGGTTCATTTCTTTGATT+TGG | - | chr5_4:13221849-13221868 | Msa0838750:CDS | 25.0% |
| !!! | CATGTTGAAATTTTGGTTTT+AGG | - | chr5_4:13221903-13221922 | Msa0838750:CDS | 25.0% |
| ! | TTGGATTCATTTCTTTGATT+TGG | - | chr5_4:13221962-13221981 | Msa0838750:intron | 25.0% |
| !!! | CATGTTGATAATTTGGTTTT+AGG | - | chr5_4:13222017-13222036 | Msa0838750:intron | 25.0% |
| ! | TAGGATTCATTTCTTTGATT+TGG | - | chr5_4:13222076-13222095 | Msa0838750:intron | 25.0% |
| !!! | CATGTTGAAAATTTGGTTTT+AGG | - | chr5_4:13222130-13222149 | Msa0838750:intron | 25.0% |
| !! | TTGTTTGTTGAATGTTGTTT+AGG | - | chr5_4:13222283-13222302 | Msa0838750:intron | 25.0% |
| !! | TGTTTGTTGAATGTTGTTTA+GGG | - | chr5_4:13222284-13222303 | Msa0838750:intron | 25.0% |
| ! | TTCAATATTTACAGTGTCTT+CGG | + | chr5_4:13222405-13222424 | None:intergenic | 25.0% |
| !!! | TTGAATTTTAACTCGTGTTT+TGG | - | chr5_4:13222420-13222439 | Msa0838750:intron | 25.0% |
| !!! | TGAATTTTAACTCGTGTTTT+GGG | - | chr5_4:13222421-13222440 | Msa0838750:intron | 25.0% |
| !!! | TTTAGGGTTATTGTTGATTT+TGG | - | chr5_4:13222456-13222475 | Msa0838750:intron | 25.0% |
| ! | ATCCTTTAGATTGTTTAGTT+AGG | - | chr5_4:13222566-13222585 | Msa0838750:CDS | 25.0% |
| ! | TTCCTAACTAAACAATCTAA+AGG | + | chr5_4:13222571-13222590 | None:intergenic | 25.0% |
| !!! | ATGTTGATTTTGTTTACTAC+AGG | - | chr5_4:13222693-13222712 | Msa0838750:CDS | 25.0% |
| ! | ATATCAAAATAGAAGTCACA+AGG | + | chr5_4:13222742-13222761 | None:intergenic | 25.0% |
| ! | ATGTTAGCGAAAGTTAAATA+TGG | + | chr5_4:13222778-13222797 | None:intergenic | 25.0% |
| ! | CACGATCAACATAAAAAATT+TGG | + | chr5_4:13222866-13222885 | None:intergenic | 25.0% |
| !!! | CAAATTTTTTATGTTGATCG+TGG | - | chr5_4:13222864-13222883 | Msa0838750:intron | 25.0% |
| !!! | TTGTTTTTGACTTGAAGAAA+TGG | - | chr5_4:13223206-13223225 | Msa0838750:CDS | 25.0% |
| !!! | TGTTTTTGACTTGAAGAAAT+GGG | - | chr5_4:13223207-13223226 | Msa0838750:CDS | 25.0% |
| !!! | CTTACTTTAAAATAAAGTCC+TGG | + | chr5_4:13223636-13223655 | None:intergenic | 25.0% |
| ! | AGTTAATTATTATCAGCTAG+TGG | - | chr5_4:13223675-13223694 | Msa0838750:intron | 25.0% |
| ! | TCTTAAGTAAAGCAAAGTTA+GGG | + | chr5_4:13223832-13223851 | None:intergenic | 25.0% |
| ! | ATCTTAAGTAAAGCAAAGTT+AGG | + | chr5_4:13223833-13223852 | None:intergenic | 25.0% |
| ! | TAGCTATAAGCCTTAATTAA+CGG | + | chr5_4:13223860-13223879 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTCATCCTCCAA+CGG | + | chr5_4:13224180-13224199 | None:intergenic | 25.0% |
| !!! | TATTTTTGAAAATCAGAACG+AGG | + | chr5_4:13224950-13224969 | None:intergenic | 25.0% |
| ! | TATATCAGATTAAAGAGAAG+TGG | - | chr5_4:13224968-13224987 | Msa0838750:intron | 25.0% |
| ! | ATTTATCAGCTAAAATGTAC+TGG | - | chr5_4:13225164-13225183 | Msa0838750:CDS | 25.0% |
| ! | TATAACTAGAATTGTGTATG+TGG | - | chr5_4:13225230-13225249 | Msa0838750:CDS | 25.0% |
| !! | TCATCGGTATTTAATTTCAA+AGG | + | chr5_4:13225416-13225435 | None:intergenic | 25.0% |
| !! | AGTGCTTGTTAAAGAAAATA+AGG | - | chr5_4:13225583-13225602 | Msa0838750:CDS | 25.0% |
| ! | TTAAAGAAAATAAGGTGGAA+TGG | - | chr5_4:13225591-13225610 | Msa0838750:CDS | 25.0% |
| ! | TAAAGAAAATAAGGTGGAAT+GGG | - | chr5_4:13225592-13225611 | Msa0838750:CDS | 25.0% |
| ! | CATATATACATACTTAGAAG+AGG | + | chr5_4:13225775-13225794 | None:intergenic | 25.0% |
| !!! | TTTTAAAGAGGTTTTGCAAT+GGG | + | chr5_4:13226006-13226025 | None:intergenic | 25.0% |
| ! | CATAGATATGTGAAAATTTG+TGG | + | chr5_4:13226405-13226424 | None:intergenic | 25.0% |
| !! | ATATGAAGTATTTAGAGACA+AGG | - | chr5_4:13226452-13226471 | Msa0838750:intron | 25.0% |
| ! | ATAATAGGTTAATCAGTTGT+TGG | + | chr5_4:13226542-13226561 | None:intergenic | 25.0% |
| !! | TTCTTATTGGTCTAACAATA+TGG | - | chr5_4:13226647-13226666 | Msa0838750:CDS | 25.0% |
| ! | AATAGTTACATCTTTAATGC+AGG | - | chr5_4:13226787-13226806 | Msa0838750:intron | 25.0% |
| ! | ATCAACTACATCTAAAGAAT+GGG | + | chr5_4:13226946-13226965 | None:intergenic | 25.0% |
| ! | AAATGAAATCAAAATAAGGG+TGG | + | chr5_4:13227014-13227033 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCCAAGAATATTC+AGG | - | chr5_4:13227037-13227056 | Msa0838750:exon | 25.0% |
| ! | TGAACAAAAAATATGGCAAA+TGG | - | chr5_4:13227160-13227179 | Msa0838750:five_prime_UTR | 25.0% |
| ! | GAACAAAAAATATGGCAAAT+GGG | - | chr5_4:13227161-13227180 | Msa0838750:five_prime_UTR | 25.0% |
| !! | TTTCACTACTTTTCATTTCC+CGG | + | chr5_4:13220934-13220953 | None:intergenic | 30.0% |
| GAAGAAATCCAAAAAATCTC+CGG | - | chr5_4:13221170-13221189 | Msa0838750:exon | 30.0% | |
| !!! | CCATTTCTTTTTAGCTTCAT+CGG | + | chr5_4:13221307-13221326 | None:intergenic | 30.0% |
| ! | TGATGGGATTTTATATAAGC+TGG | - | chr5_4:13221499-13221518 | Msa0838750:intron | 30.0% |
| !! | TCATTTCTTTGATTTGGTGA+TGG | - | chr5_4:13221855-13221874 | Msa0838750:CDS | 30.0% |
| !! | TCATTTCTTTGATTTGGTGT+TGG | - | chr5_4:13221968-13221987 | Msa0838750:intron | 30.0% |
| ! | CATGTTGAAAACTGTGTTTT+AGG | - | chr5_4:13221830-13221849 | Msa0838750:intron | 30.0% |
| !! | GATTCATTTCTTTGATTTGG+TGG | - | chr5_4:13221965-13221984 | Msa0838750:intron | 30.0% |
| ! | GTTGTTTGGGTTTATTGATT+TGG | - | chr5_4:13222225-13222244 | Msa0838750:CDS | 30.0% |
| ! | GTTTGTTGAATGTTGTTTAG+GGG | - | chr5_4:13222285-13222304 | Msa0838750:intron | 30.0% |
| ! | TTTGTTGAATGTTGTTTAGG+GGG | - | chr5_4:13222286-13222305 | Msa0838750:intron | 30.0% |
| GTAAAATATTGTTCTTCCTC+AGG | + | chr5_4:13222362-13222381 | None:intergenic | 30.0% | |
| ! | AACAATATTTTACTGCCCAA+TGG | - | chr5_4:13222369-13222388 | Msa0838750:intron | 30.0% |
| ACTTTACTGGATTTGTATTC+TGG | - | chr5_4:13223034-13223053 | Msa0838750:intron | 30.0% | |
| CTTTACTGGATTTGTATTCT+GGG | - | chr5_4:13223035-13223054 | Msa0838750:intron | 30.0% | |
| !!! | TTGGTTCATTTTAACTTTGC+TGG | - | chr5_4:13223150-13223169 | Msa0838750:intron | 30.0% |
| TCACCTGAATTTAACATTTC+GGG | + | chr5_4:13223386-13223405 | None:intergenic | 30.0% | |
| CTCACCTGAATTTAACATTT+CGG | + | chr5_4:13223387-13223406 | None:intergenic | 30.0% | |
| AGACTTAAAAAGTCTTCTGT+GGG | + | chr5_4:13223417-13223436 | None:intergenic | 30.0% | |
| !! | TTTTAAGTCTCCTAAAAGAG+TGG | - | chr5_4:13223427-13223446 | Msa0838750:intron | 30.0% |
| TTTAAGTCTCCTAAAAGAGT+GGG | - | chr5_4:13223428-13223447 | Msa0838750:intron | 30.0% | |
| CTTAAGTAAAGCAAAGTTAG+GGG | + | chr5_4:13223831-13223850 | None:intergenic | 30.0% | |
| TAAGATTTGCCCGTTAATTA+AGG | - | chr5_4:13223847-13223866 | Msa0838750:CDS | 30.0% | |
| AGCTATAAGCCTTAATTAAC+GGG | + | chr5_4:13223859-13223878 | None:intergenic | 30.0% | |
| TTGAGTACAAGTCAATAATG+AGG | + | chr5_4:13224004-13224023 | None:intergenic | 30.0% | |
| GAGAATTGATAAACCATTAG+AGG | + | chr5_4:13224039-13224058 | None:intergenic | 30.0% | |
| !!! | GTAGACATTTTGAAATTTGC+TGG | - | chr5_4:13224267-13224286 | Msa0838750:intron | 30.0% |
| !!! | ACATTTTGAAATTTGCTGGT+GGG | - | chr5_4:13224271-13224290 | Msa0838750:intron | 30.0% |
| ATGAATTATCAAGCTCGAAT+GGG | - | chr5_4:13224330-13224349 | Msa0838750:intron | 30.0% | |
| GAACTTTACTATCACAACAT+GGG | + | chr5_4:13224661-13224680 | None:intergenic | 30.0% | |
| AGAACTTTACTATCACAACA+TGG | + | chr5_4:13224662-13224681 | None:intergenic | 30.0% | |
| ! | AAGTTCTAATCAATGTGATC+TGG | - | chr5_4:13224675-13224694 | Msa0838750:CDS | 30.0% |
| ! | AGTTCTAATCAATGTGATCT+GGG | - | chr5_4:13224676-13224695 | Msa0838750:CDS | 30.0% |
| AACAAAATCAACATACTGGT+GGG | + | chr5_4:13224798-13224817 | None:intergenic | 30.0% | |
| AGTGAACAAAATCAACATAC+TGG | + | chr5_4:13224802-13224821 | None:intergenic | 30.0% | |
| TTTGATTCCACTTCTTTACT+CGG | - | chr5_4:13224861-13224880 | Msa0838750:intron | 30.0% | |
| ! | TCGGTTTTCTTTTATCAAAC+AGG | - | chr5_4:13224880-13224899 | Msa0838750:CDS | 30.0% |
| !!! | TTTGAGTTTTGAAGTAGTCT+TGG | - | chr5_4:13225008-13225027 | Msa0838750:intron | 30.0% |
| GATTGTATGAATCTTACTCT+AGG | + | chr5_4:13225141-13225160 | None:intergenic | 30.0% | |
| TCCTTCATCATTAAACTGAA+CGG | - | chr5_4:13225300-13225319 | Msa0838750:intron | 30.0% | |
| AGATATGATACCTTCTTCTT+TGG | + | chr5_4:13225461-13225480 | None:intergenic | 30.0% | |
| ! | GCTTGTTAAAGAAAATAAGG+TGG | - | chr5_4:13225586-13225605 | Msa0838750:CDS | 30.0% |
| TACTAATCTTGTCTTGTCTT+GGG | - | chr5_4:13225660-13225679 | Msa0838750:intron | 30.0% | |
| ACAAATGTCATTGCATAATC+TGG | + | chr5_4:13225744-13225763 | None:intergenic | 30.0% | |
| CAAACAATAACCTGATTATG+AGG | + | chr5_4:13225934-13225953 | None:intergenic | 30.0% | |
| !!! | GTTTTAAAGAGGTTTTGCAA+TGG | + | chr5_4:13226007-13226026 | None:intergenic | 30.0% |
| TGTGAAAATTTGTGGATACA+AGG | + | chr5_4:13226397-13226416 | None:intergenic | 30.0% | |
| ATTCCAATCTCAAAATGGAA+GGG | + | chr5_4:13226498-13226517 | None:intergenic | 30.0% | |
| AACAGATTCCAATCTCAAAA+TGG | + | chr5_4:13226503-13226522 | None:intergenic | 30.0% | |
| CATCAACTACATCTAAAGAA+TGG | + | chr5_4:13226947-13226966 | None:intergenic | 30.0% | |
| !! | TTAGATGTAGTTGATGATGA+TGG | - | chr5_4:13226951-13226970 | Msa0838750:CDS | 30.0% |
| CATTCATTCATACAATTCCA+GGG | + | chr5_4:13227063-13227082 | None:intergenic | 30.0% | |
| ACATTCATTCATACAATTCC+AGG | + | chr5_4:13227064-13227083 | None:intergenic | 30.0% | |
| !!! | GATTTACGAACGCGTTTTTT+AGG | + | chr5_4:13221111-13221130 | None:intergenic | 35.0% |
| AGAAACCAGTTCTTCTTCAA+CGG | + | chr5_4:13221202-13221221 | None:intergenic | 35.0% | |
| TTCGCTTTCTTTCTTCTAGA+AGG | + | chr5_4:13221231-13221250 | None:intergenic | 35.0% | |
| AAAGAAAGCGAAGCAATCTT+CGG | - | chr5_4:13221239-13221258 | Msa0838750:CDS | 35.0% | |
| CCGATGAAGCTAAAAAGAAA+TGG | - | chr5_4:13221304-13221323 | Msa0838750:CDS | 35.0% | |
| ATAGAAAACTCACTCGTTCT+TGG | + | chr5_4:13221343-13221362 | None:intergenic | 35.0% | |
| ! | TGGGATTTTATATAAGCTGG+AGG | - | chr5_4:13221502-13221521 | Msa0838750:intron | 35.0% |
| !! | TCATTTCTTTGATTTGGTGG+TGG | - | chr5_4:13222082-13222101 | Msa0838750:intron | 35.0% |
| ! | ATGCTGAATACTGTGTTGTT+TGG | - | chr5_4:13222211-13222230 | Msa0838750:intron | 35.0% |
| !! | TGCTGAATACTGTGTTGTTT+GGG | - | chr5_4:13222212-13222231 | Msa0838750:intron | 35.0% |
| ! | TTGGGTTTGTTTAGCTGTTT+AGG | - | chr5_4:13222439-13222458 | Msa0838750:intron | 35.0% |
| ! | TGGGTTTGTTTAGCTGTTTA+GGG | - | chr5_4:13222440-13222459 | Msa0838750:intron | 35.0% |
| ! | TTTTGTCAACTAGATTCCCA+TGG | + | chr5_4:13222513-13222532 | None:intergenic | 35.0% |
| GGAATCTAGTTGACAAAAAG+AGG | - | chr5_4:13222515-13222534 | Msa0838750:CDS | 35.0% | |
| TCAAAATAGAAGTCACAAGG+AGG | + | chr5_4:13222739-13222758 | None:intergenic | 35.0% | |
| ACTTTCGCTAACATTGACAA+TGG | - | chr5_4:13222784-13222803 | Msa0838750:CDS | 35.0% | |
| TGAAGTCTCGCTTTCTATTA+TGG | + | chr5_4:13222915-13222934 | None:intergenic | 35.0% | |
| ! | TCAACACTTTCAAGTGAATC+CGG | - | chr5_4:13222932-13222951 | Msa0838750:intron | 35.0% |
| AAGAATCTAAGAAGCTTGAG+TGG | - | chr5_4:13223011-13223030 | Msa0838750:intron | 35.0% | |
| CAAAACATACGTGTGTTTCT+GGG | + | chr5_4:13223279-13223298 | None:intergenic | 35.0% | |
| CTTCCCGAAATGTTAAATTC+AGG | - | chr5_4:13223380-13223399 | Msa0838750:CDS | 35.0% | |
| CGAAATGTTAAATTCAGGTG+AGG | - | chr5_4:13223385-13223404 | Msa0838750:CDS | 35.0% | |
| GAGACTTAAAAAGTCTTCTG+TGG | + | chr5_4:13223418-13223437 | None:intergenic | 35.0% | |
| ! | ACAGATTCTGATTTGAATGC+TGG | - | chr5_4:13223492-13223511 | Msa0838750:intron | 35.0% |
| !! | CCTGGTTTTTCATCTTCATT+GGG | + | chr5_4:13223618-13223637 | None:intergenic | 35.0% |
| !! | TCCTGGTTTTTCATCTTCAT+TGG | + | chr5_4:13223619-13223638 | None:intergenic | 35.0% |
| ! | TTCTTATCTTTCAGGTGCAT+TGG | - | chr5_4:13223721-13223740 | Msa0838750:intron | 35.0% |
| ACGATTCCAGTTATGATACA+TGG | - | chr5_4:13223751-13223770 | Msa0838750:CDS | 35.0% | |
| CGATTCCAGTTATGATACAT+GGG | - | chr5_4:13223752-13223771 | Msa0838750:CDS | 35.0% | |
| TACAAGTCAATAATGAGGAG+TGG | + | chr5_4:13223999-13224018 | None:intergenic | 35.0% | |
| AACCATTAGAGGTGAAAGAA+GGG | + | chr5_4:13224028-13224047 | None:intergenic | 35.0% | |
| AAACCATTAGAGGTGAAAGA+AGG | + | chr5_4:13224029-13224048 | None:intergenic | 35.0% | |
| !! | GCCAAGCTGATTTTATTTGT+GGG | - | chr5_4:13224100-13224119 | Msa0838750:intron | 35.0% |
| !! | CCAAGCTGATTTTATTTGTG+GGG | - | chr5_4:13224101-13224120 | Msa0838750:intron | 35.0% |
| !! | CAAGCTGATTTTATTTGTGG+GGG | - | chr5_4:13224102-13224121 | Msa0838750:intron | 35.0% |
| !! | AAGCTGATTTTATTTGTGGG+GGG | - | chr5_4:13224103-13224122 | Msa0838750:intron | 35.0% |
| TTCTCCATCAGAACATACTT+AGG | + | chr5_4:13224243-13224262 | None:intergenic | 35.0% | |
| !!! | GACATTTTGAAATTTGCTGG+TGG | - | chr5_4:13224270-13224289 | Msa0838750:intron | 35.0% |
| ! | CATTCGAGCTTGATAATTCA+TGG | + | chr5_4:13224331-13224350 | None:intergenic | 35.0% |
| CATGAATTATCAAGCTCGAA+TGG | - | chr5_4:13224329-13224348 | Msa0838750:intron | 35.0% | |
| TTCTTACTTCAAACTCAGTG+GGG | + | chr5_4:13224594-13224613 | None:intergenic | 35.0% | |
| GTTCTTACTTCAAACTCAGT+GGG | + | chr5_4:13224595-13224614 | None:intergenic | 35.0% | |
| AGTTCTTACTTCAAACTCAG+TGG | + | chr5_4:13224596-13224615 | None:intergenic | 35.0% | |
| ! | TTGTGCCTTTTTCTTAGACA+AGG | - | chr5_4:13224633-13224652 | Msa0838750:CDS | 35.0% |
| ! | TCTGGGTACTTTTATAATGC+AGG | - | chr5_4:13224693-13224712 | Msa0838750:CDS | 35.0% |
| ! | CAGCTGACAATTTTCATTAG+TGG | + | chr5_4:13224737-13224756 | None:intergenic | 35.0% |
| CACTAATGAAAATTGTCAGC+TGG | - | chr5_4:13224735-13224754 | Msa0838750:CDS | 35.0% | |
| GATCATTAATTGCATCCTCA+AGG | + | chr5_4:13224774-13224793 | None:intergenic | 35.0% | |
| GAACAAAATCAACATACTGG+TGG | + | chr5_4:13224799-13224818 | None:intergenic | 35.0% | |
| AAGAAAACCGAGTAAAGAAG+TGG | + | chr5_4:13224871-13224890 | None:intergenic | 35.0% | |
| CCTTCATCATTAAACTGAAC+GGG | - | chr5_4:13225301-13225320 | Msa0838750:intron | 35.0% | |
| !! | ATACCTTCTTCTTTGGAATG+TGG | + | chr5_4:13225454-13225473 | None:intergenic | 35.0% |
| ! | TTGTGCTTGCTTGTCTTTTT+AGG | - | chr5_4:13225535-13225554 | Msa0838750:intron | 35.0% |
| ! | TGTGCTTGCTTGTCTTTTTA+GGG | - | chr5_4:13225536-13225555 | Msa0838750:intron | 35.0% |
| ! | GAAAGAGTGCATCTAAAATC+TGG | - | chr5_4:13225626-13225645 | Msa0838750:CDS | 35.0% |
| ! | TCTAAAATCTGGAAAGCCTT+TGG | - | chr5_4:13225637-13225656 | Msa0838750:CDS | 35.0% |
| CAAGACAAGATTAGTACCAA+AGG | + | chr5_4:13225656-13225675 | None:intergenic | 35.0% | |
| GTACTAATCTTGTCTTGTCT+TGG | - | chr5_4:13225659-13225678 | Msa0838750:intron | 35.0% | |
| ACTAATCTTGTCTTGTCTTG+GGG | - | chr5_4:13225661-13225680 | Msa0838750:intron | 35.0% | |
| TATGCAATGACATTTGTTCG+TGG | - | chr5_4:13225747-13225766 | Msa0838750:CDS | 35.0% | |
| ATGCAATGACATTTGTTCGT+GGG | - | chr5_4:13225748-13225767 | Msa0838750:CDS | 35.0% | |
| TTGTGTCTACTGTTGTAACA+AGG | - | chr5_4:13225902-13225921 | Msa0838750:intron | 35.0% | |
| TGTGTCTACTGTTGTAACAA+GGG | - | chr5_4:13225903-13225922 | Msa0838750:intron | 35.0% | |
| AATAACCTGATTATGAGGCT+CGG | + | chr5_4:13225929-13225948 | None:intergenic | 35.0% | |
| TGAGAAATGTTATTGACCTC+AGG | - | chr5_4:13226038-13226057 | Msa0838750:intron | 35.0% | |
| ATGCTAACATGATAATCCTG+AGG | + | chr5_4:13226057-13226076 | None:intergenic | 35.0% | |
| ATCTGACCATGTTCTTTGTT+TGG | - | chr5_4:13226093-13226112 | Msa0838750:intron | 35.0% | |
| ! | GAAGTATTTAGAGACAAGGA+TGG | - | chr5_4:13226456-13226475 | Msa0838750:intron | 35.0% |
| GATTCCAATCTCAAAATGGA+AGG | + | chr5_4:13226499-13226518 | None:intergenic | 35.0% | |
| ! | TTGTTGGTTAAGGAATTGGA+AGG | + | chr5_4:13226526-13226545 | None:intergenic | 35.0% |
| ! | TCAGTTGTTGGTTAAGGAAT+TGG | + | chr5_4:13226530-13226549 | None:intergenic | 35.0% |
| ! | GGTTAATCAGTTGTTGGTTA+AGG | + | chr5_4:13226536-13226555 | None:intergenic | 35.0% |
| ACTGCTTAATAACTCTCCTA+AGG | - | chr5_4:13226595-13226614 | Msa0838750:intron | 35.0% | |
| CTGCTTAATAACTCTCCTAA+GGG | - | chr5_4:13226596-13226615 | Msa0838750:intron | 35.0% | |
| AAGTTCTTTACTGATCCCTT+AGG | + | chr5_4:13226614-13226633 | None:intergenic | 35.0% | |
| ! | GGGATCAGTAAAGAACTTTT+AGG | - | chr5_4:13226616-13226635 | Msa0838750:intron | 35.0% |
| TGCCATGCTATACATAATGA+CGG | + | chr5_4:13226764-13226783 | None:intergenic | 35.0% | |
| TAAACCGAATGTGTATCCAA+GGG | + | chr5_4:13226856-13226875 | None:intergenic | 35.0% | |
| ACATTCGGTTTAGCAATTCA+AGG | - | chr5_4:13226864-13226883 | Msa0838750:CDS | 35.0% | |
| AGACAACTTGGGTACTTAAA+GGG | + | chr5_4:13226921-13226940 | None:intergenic | 35.0% | |
| TAGACAACTTGGGTACTTAA+AGG | + | chr5_4:13226922-13226941 | None:intergenic | 35.0% | |
| ! | GGAAAAGACATGGATTAATG+AGG | + | chr5_4:13226993-13227012 | None:intergenic | 35.0% |
| AAATAAGGGTGGAAAAGACA+TGG | + | chr5_4:13227003-13227022 | None:intergenic | 35.0% | |
| ATGAAGGAGAAGAGGAAAAG+CGG | + | chr5_4:13220986-13221005 | None:intergenic | 40.0% | |
| TGTTAGGAGAAGAGAGAAGA+AGG | + | chr5_4:13221048-13221067 | None:intergenic | 40.0% | |
| !!! | GCGTTTTTTAGGCATTGTTG+AGG | + | chr5_4:13221100-13221119 | None:intergenic | 40.0% |
| !!! | GGGATTAACCGGAGATTTTT+TGG | + | chr5_4:13221181-13221200 | None:intergenic | 40.0% |
| TCTTCTTCAACGGGATTAAC+CGG | + | chr5_4:13221192-13221211 | None:intergenic | 40.0% | |
| TAATCCCGTTGAAGAAGAAC+TGG | - | chr5_4:13221194-13221213 | Msa0838750:CDS | 40.0% | |
| GAAACCAGTTCTTCTTCAAC+GGG | + | chr5_4:13221201-13221220 | None:intergenic | 40.0% | |
| !!! | TTCTTTTTAGCTTCATCGGC+CGG | + | chr5_4:13221303-13221322 | None:intergenic | 40.0% |
| ! | GTTTTGTAGTGAATCGAGTG+AGG | - | chr5_4:13221433-13221452 | Msa0838750:intron | 40.0% |
| GAGTGAGGATGAAAGTTTGA+AGG | - | chr5_4:13221448-13221467 | Msa0838750:intron | 40.0% | |
| GGAGGATAATGCTTATGTCA+AGG | - | chr5_4:13221520-13221539 | Msa0838750:intron | 40.0% | |
| TTCGGCTCTGTAAAACCATT+GGG | + | chr5_4:13222387-13222406 | None:intergenic | 40.0% | |
| GGTAATTTGAATGTGTGTGC+AGG | - | chr5_4:13222477-13222496 | Msa0838750:intron | 40.0% | |
| AATGTGTGTGCAGGTGATTA+AGG | - | chr5_4:13222486-13222505 | Msa0838750:intron | 40.0% | |
| ! | CTACACAAAGCACTTACATC+AGG | + | chr5_4:13222616-13222635 | None:intergenic | 40.0% |
| ! | CAACACTTTCAAGTGAATCC+GGG | - | chr5_4:13222933-13222952 | Msa0838750:intron | 40.0% |
| TCCGTGCAACTGATAAGAAA+GGG | - | chr5_4:13222963-13222982 | Msa0838750:intron | 40.0% | |
| AAATAGACGCTCCAAAGCAA+AGG | + | chr5_4:13223081-13223100 | None:intergenic | 40.0% | |
| TTCTGGCATTAAGCTTGTGA+CGG | - | chr5_4:13223099-13223118 | Msa0838750:intron | 40.0% | |
| CCAAAACATACGTGTGTTTC+TGG | + | chr5_4:13223280-13223299 | None:intergenic | 40.0% | |
| ! | CCAGAAACACACGTATGTTT+TGG | - | chr5_4:13223277-13223296 | Msa0838750:intron | 40.0% |
| ! | AAAGCTTAGCCCACTCTTTT+AGG | + | chr5_4:13223440-13223459 | None:intergenic | 40.0% |
| TGTGACGAGTTTGTACTGAA+TGG | - | chr5_4:13223459-13223478 | Msa0838750:intron | 40.0% | |
| AACCTCAAATACCTCAGAGT+CGG | + | chr5_4:13223565-13223584 | None:intergenic | 40.0% | |
| AGACTACTCTCTATCTGCTA+TGG | - | chr5_4:13223588-13223607 | Msa0838750:CDS | 40.0% | |
| CCCAATGAAGATGAAAAACC+AGG | - | chr5_4:13223615-13223634 | Msa0838750:intron | 40.0% | |
| ! | TATCTTTCAGGTGCATTGGA+AGG | - | chr5_4:13223725-13223744 | Msa0838750:intron | 40.0% |
| ! | ATCTTTCAGGTGCATTGGAA+GGG | - | chr5_4:13223726-13223745 | Msa0838750:intron | 40.0% |
| ACCATTAGAGGTGAAAGAAG+GGG | + | chr5_4:13224027-13224046 | None:intergenic | 40.0% | |
| !! | GGCCAAGCTGATTTTATTTG+TGG | - | chr5_4:13224099-13224118 | Msa0838750:intron | 40.0% |
| CCCCACAAATAAAATCAGCT+TGG | + | chr5_4:13224104-13224123 | None:intergenic | 40.0% | |
| AAACCACTAACACCTTGACA+AGG | + | chr5_4:13224132-13224151 | None:intergenic | 40.0% | |
| TTAGTGGTTTCAATCGCTTC+AGG | - | chr5_4:13224142-13224161 | Msa0838750:intron | 40.0% | |
| GAAGCCTAAGTATGTTCTGA+TGG | - | chr5_4:13224236-13224255 | Msa0838750:intron | 40.0% | |
| !! | AAATTTGCTGGTGGGTTTCT+GGG | - | chr5_4:13224279-13224298 | Msa0838750:intron | 40.0% |
| GATAATTCATGGCCACTAGA+CGG | + | chr5_4:13224320-13224339 | None:intergenic | 40.0% | |
| CATATGGCCTTCCTCAATTT+CGG | - | chr5_4:13224370-13224389 | Msa0838750:CDS | 40.0% | |
| AAAACACGCATCCGAAATTG+AGG | + | chr5_4:13224384-13224403 | None:intergenic | 40.0% | |
| ! | TTCGGATGCGTGTTTTTCTT+TGG | - | chr5_4:13224388-13224407 | Msa0838750:CDS | 40.0% |
| ! | TCGGATGCGTGTTTTTCTTT+GGG | - | chr5_4:13224389-13224408 | Msa0838750:CDS | 40.0% |
| !! | TGAGTTGGTAACGGATATGA+CGG | + | chr5_4:13224547-13224566 | None:intergenic | 40.0% |
| ATATCCGTTACCAACTCATG+AGG | - | chr5_4:13224549-13224568 | Msa0838750:CDS | 40.0% | |
| !! | ACAACCTCATGAGTTGGTAA+CGG | + | chr5_4:13224556-13224575 | None:intergenic | 40.0% |
| GGGTTCCTTGTCTAAGAAAA+AGG | + | chr5_4:13224641-13224660 | None:intergenic | 40.0% | |
| ATCCTCAAGGTTTAATGCCT+TGG | + | chr5_4:13224761-13224780 | None:intergenic | 40.0% | |
| ! | AACTGCATTTTCTCTCACTC+TGG | - | chr5_4:13225200-13225219 | Msa0838750:CDS | 40.0% |
| GCATGTTGTTACATGTCACA+TGG | - | chr5_4:13225258-13225277 | Msa0838750:intron | 40.0% | |
| CCCGTTCAGTTTAATGATGA+AGG | + | chr5_4:13225304-13225323 | None:intergenic | 40.0% | |
| ! | TGTGTTTTCTACTCCAGAGA+TGG | - | chr5_4:13225334-13225353 | Msa0838750:intron | 40.0% |
| GCAGAATAATTCACCATCTC+TGG | + | chr5_4:13225350-13225369 | None:intergenic | 40.0% | |
| TGATCATACAGCATACCACT+TGG | + | chr5_4:13225389-13225408 | None:intergenic | 40.0% | |
| GCAAACTCTCTCATAGTCAT+CGG | + | chr5_4:13225432-13225451 | None:intergenic | 40.0% | |
| TTGCCACATTCCAAAGAAGA+AGG | - | chr5_4:13225448-13225467 | Msa0838750:intron | 40.0% | |
| ! | GTGCTTGCTTGTCTTTTTAG+GGG | - | chr5_4:13225537-13225556 | Msa0838750:intron | 40.0% |
| !! | TGCTTGCTTGTCTTTTTAGG+GGG | - | chr5_4:13225538-13225557 | Msa0838750:intron | 40.0% |
| !! | TTTTTAGGGGGCAAACTTCA+GGG | - | chr5_4:13225550-13225569 | Msa0838750:CDS | 40.0% |
| AGATGCACTCTTTCAACAGA+GGG | + | chr5_4:13225620-13225639 | None:intergenic | 40.0% | |
| TAGATGCACTCTTTCAACAG+AGG | + | chr5_4:13225621-13225640 | None:intergenic | 40.0% | |
| CCTGTGGAAAAAAAAGGTAG+TGG | + | chr5_4:13225719-13225738 | None:intergenic | 40.0% | |
| !!! | CCACTACCTTTTTTTTCCAC+AGG | - | chr5_4:13225716-13225735 | Msa0838750:intron | 40.0% |
| CTGGAACCTGTGGAAAAAAA+AGG | + | chr5_4:13225725-13225744 | None:intergenic | 40.0% | |
| ! | ATTGCATAATCTGGAACCTG+TGG | + | chr5_4:13225735-13225754 | None:intergenic | 40.0% |
| ATGTATCTGCTGAACACAAC+AGG | - | chr5_4:13225851-13225870 | Msa0838750:intron | 40.0% | |
| ! | TAAAGAGGTTTTGCAATGGG+AGG | + | chr5_4:13226003-13226022 | None:intergenic | 40.0% |
| ACGAGTCCAAACAAAGAACA+TGG | + | chr5_4:13226102-13226121 | None:intergenic | 40.0% | |
| ACCTGGAAATGGAATGACAT+GGG | + | chr5_4:13226190-13226209 | None:intergenic | 40.0% | |
| AACCTGGAAATGGAATGACA+TGG | + | chr5_4:13226191-13226210 | None:intergenic | 40.0% | |
| ! | CTAAGAACTCTGTCTTGTTC+TGG | + | chr5_4:13226223-13226242 | None:intergenic | 40.0% |
| TTAGCATTCGAGAGAATGCA+AGG | - | chr5_4:13226239-13226258 | Msa0838750:intron | 40.0% | |
| ACACATACCTCTGTTTGACA+GGG | + | chr5_4:13226300-13226319 | None:intergenic | 40.0% | |
| AACACATACCTCTGTTTGAC+AGG | + | chr5_4:13226301-13226320 | None:intergenic | 40.0% | |
| ! | ACAGAGGTATGTGTTTGAAC+TGG | - | chr5_4:13226306-13226325 | Msa0838750:intron | 40.0% |
| !!! | CTTCCCTTCCATTTTGAGAT+TGG | - | chr5_4:13226492-13226511 | Msa0838750:intron | 40.0% |
| TCCCGTCATTATGTATAGCA+TGG | - | chr5_4:13226759-13226778 | Msa0838750:intron | 40.0% | |
| GCCATGCTATACATAATGAC+GGG | + | chr5_4:13226763-13226782 | None:intergenic | 40.0% | |
| TAATGCAGGTACATGCAAGT+TGG | - | chr5_4:13226801-13226820 | Msa0838750:intron | 40.0% | |
| CTAAACCGAATGTGTATCCA+AGG | + | chr5_4:13226857-13226876 | None:intergenic | 40.0% | |
| TTAAAGGGGAGAGTTGTCAA+AGG | + | chr5_4:13226906-13226925 | None:intergenic | 40.0% | |
| GACAACTTGGGTACTTAAAG+GGG | + | chr5_4:13226920-13226939 | None:intergenic | 40.0% | |
| !! | AAGAATGGGCTAGACAACTT+GGG | + | chr5_4:13226932-13226951 | None:intergenic | 40.0% |
| !! | AAAGAATGGGCTAGACAACT+TGG | + | chr5_4:13226933-13226952 | None:intergenic | 40.0% |
| TGAAGGAGAAGAGGAAAAGC+GGG | + | chr5_4:13220985-13221004 | None:intergenic | 45.0% | |
| TCGTTCCTCGTTCTTCTCAA+CGG | - | chr5_4:13221148-13221167 | Msa0838750:three_prime_UTR | 45.0% | |
| TTCTTCCGTTGAGAAGAACG+AGG | + | chr5_4:13221156-13221175 | None:intergenic | 45.0% | |
| TCCAACGAAGAATGCATCGT+CGG | + | chr5_4:13221271-13221290 | None:intergenic | 45.0% | |
| CTTCGTTGGAGAACCTATTC+CGG | - | chr5_4:13221281-13221300 | Msa0838750:CDS | 45.0% | |
| ! | CTCACTCGTTCTTGGTGTAT+CGG | + | chr5_4:13221335-13221354 | None:intergenic | 45.0% |
| ! | GTTGAATGTTGTTTAGGGGG+AGG | - | chr5_4:13222289-13222308 | Msa0838750:intron | 45.0% |
| ! | AATGTTGTTTAGGGGGAGGA+AGG | - | chr5_4:13222293-13222312 | Msa0838750:intron | 45.0% |
| GGATTACATCGCTACGATTG+TGG | - | chr5_4:13222322-13222341 | Msa0838750:intron | 45.0% | |
| GGAGATGTTTGAATCTCCTG+AGG | - | chr5_4:13222343-13222362 | Msa0838750:intron | 45.0% | |
| CTTCGGCTCTGTAAAACCAT+TGG | + | chr5_4:13222388-13222407 | None:intergenic | 45.0% | |
| TGCAGGTGATTAAGGACCAT+GGG | - | chr5_4:13222494-13222513 | Msa0838750:intron | 45.0% | |
| GTCTCGCTTTCTATTATGGC+AGG | + | chr5_4:13222911-13222930 | None:intergenic | 45.0% | |
| CTTATCAGTTGCACGGACAT+TGG | + | chr5_4:13222960-13222979 | None:intergenic | 45.0% | |
| GTCCGTGCAACTGATAAGAA+AGG | - | chr5_4:13222962-13222981 | Msa0838750:intron | 45.0% | |
| CCCCTTTCTTATCAGTTGCA+CGG | + | chr5_4:13222967-13222986 | None:intergenic | 45.0% | |
| CCGTGCAACTGATAAGAAAG+GGG | - | chr5_4:13222964-13222983 | Msa0838750:intron | 45.0% | |
| ! | GAAGCTTGAGTGGACTTTAC+TGG | - | chr5_4:13223021-13223040 | Msa0838750:intron | 45.0% |
| CTGGATTTGTATTCTGGGTG+TGG | - | chr5_4:13223040-13223059 | Msa0838750:intron | 45.0% | |
| !! | TGCTTTGGAGCGTCTATTTC+TGG | - | chr5_4:13223082-13223101 | Msa0838750:intron | 45.0% |
| !! | TGACTTGAAGAAATGGGCTG+TGG | - | chr5_4:13223213-13223232 | Msa0838750:CDS | 45.0% |
| ! | AGAAGCTGATGATGAAGCGA+TGG | - | chr5_4:13223530-13223549 | Msa0838750:CDS | 45.0% |
| GGATAATTCATCCGACTCTG+AGG | - | chr5_4:13223551-13223570 | Msa0838750:CDS | 45.0% | |
| !! | ATCCGACTCTGAGGTATTTG+AGG | - | chr5_4:13223560-13223579 | Msa0838750:CDS | 45.0% |
| ACCCCTTCTTTCACCTCTAA+TGG | - | chr5_4:13224023-13224042 | Msa0838750:CDS | 45.0% | |
| TCTGTACCACTTTCTCGTAC+AGG | - | chr5_4:13224077-13224096 | Msa0838750:intron | 45.0% | |
| CTGTACCACTTTCTCGTACA+GGG | - | chr5_4:13224078-13224097 | Msa0838750:intron | 45.0% | |
| !! | GAAATTTGCTGGTGGGTTTC+TGG | - | chr5_4:13224278-13224297 | Msa0838750:intron | 45.0% |
| !! | AATTTGCTGGTGGGTTTCTG+GGG | - | chr5_4:13224280-13224299 | Msa0838750:intron | 45.0% |
| TCAAGCTCGAATGGGAATGA+TGG | - | chr5_4:13224338-13224357 | Msa0838750:intron | 45.0% | |
| ! | CGGATGCGTGTTTTTCTTTG+GGG | - | chr5_4:13224390-13224409 | Msa0838750:CDS | 45.0% |
| ! | AAGCAATGGCCTTACTTCAG+TGG | + | chr5_4:13224424-13224443 | None:intergenic | 45.0% |
| CTCGATACAACCTCATGAGT+TGG | + | chr5_4:13224562-13224581 | None:intergenic | 45.0% | |
| TGAAAATTGTCAGCTGGCCA+AGG | - | chr5_4:13224741-13224760 | Msa0838750:intron | 45.0% | |
| AGCGATGATGAAAGGAGCTA+TGG | - | chr5_4:13224917-13224936 | Msa0838750:CDS | 45.0% | |
| GCGATGATGAAAGGAGCTAT+GGG | - | chr5_4:13224918-13224937 | Msa0838750:intron | 45.0% | |
| GTGGTATGCTGTATGATCAC+AGG | - | chr5_4:13225390-13225409 | Msa0838750:CDS | 45.0% | |
| !! | CTTTTTAGGGGGCAAACTTC+AGG | - | chr5_4:13225549-13225568 | Msa0838750:CDS | 45.0% |
| CTTTAACAAGCACTCCCTTG+AGG | + | chr5_4:13225577-13225596 | None:intergenic | 45.0% | |
| GATGCACTCTTTCAACAGAG+GGG | + | chr5_4:13225619-13225638 | None:intergenic | 45.0% | |
| CAATGGGAGGATAGCATAAG+TGG | + | chr5_4:13225990-13226009 | None:intergenic | 45.0% | |
| TCCCATGTCATTCCATTTCC+AGG | - | chr5_4:13226186-13226205 | Msa0838750:intron | 45.0% | |
| GATGGAGAAGAACCTGGAAA+TGG | + | chr5_4:13226201-13226220 | None:intergenic | 45.0% | |
| ! | GAACTCTGTCTTGTTCTGGA+TGG | + | chr5_4:13226219-13226238 | None:intergenic | 45.0% |
| CCACAAAGCTTATAGCAGTC+TGG | + | chr5_4:13226277-13226296 | None:intergenic | 45.0% | |
| CCAGACTGCTATAAGCTTTG+TGG | - | chr5_4:13226274-13226293 | Msa0838750:intron | 45.0% | |
| ! | AAATGCAGTTGCTGTTCCTG+TGG | - | chr5_4:13226824-13226843 | Msa0838750:CDS | 45.0% |
| GAATGTGTATCCAAGGGCAA+GGG | + | chr5_4:13226850-13226869 | None:intergenic | 45.0% | |
| CTTGCCCTTGGATACACATT+CGG | - | chr5_4:13226849-13226868 | Msa0838750:CDS | 45.0% | |
| GCAATTCAAGGACTCTCTGA+TGG | - | chr5_4:13226876-13226895 | Msa0838750:CDS | 45.0% | |
| TTCCAGGGCCTGAATATTCT+TGG | + | chr5_4:13227048-13227067 | None:intergenic | 45.0% | |
| !!! | ACTATTTAAATATTTTTAAA+TGG | - | chr5_4:13224481-13224500 | Msa0838750:intron | 5.0% |
| ! | AGGAACGACGTCGTCTTGTT+TGG | + | chr5_4:13221136-13221155 | None:intergenic | 50.0% |
| TCCGACGATGCATTCTTCGT+TGG | - | chr5_4:13221267-13221286 | Msa0838750:CDS | 50.0% | |
| TTAGCTTCATCGGCCGGAAT+AGG | + | chr5_4:13221297-13221316 | None:intergenic | 50.0% | |
| ! | TCGTTCTTGGTGTATCGGTG+AGG | + | chr5_4:13221330-13221349 | None:intergenic | 50.0% |
| GTTTCACTACCGTGAAGCGA+AGG | - | chr5_4:13221475-13221494 | Msa0838750:intron | 50.0% | |
| TACCGTGAAGCGAAGGTTGA+TGG | - | chr5_4:13221482-13221501 | Msa0838750:intron | 50.0% | |
| ! | ACCGTGAAGCGAAGGTTGAT+GGG | - | chr5_4:13221483-13221502 | Msa0838750:intron | 50.0% |
| TCCCATCAACCTTCGCTTCA+CGG | + | chr5_4:13221487-13221506 | None:intergenic | 50.0% | |
| TTAGGGGGAGGAAGGAAAAG+AGG | - | chr5_4:13222301-13222320 | Msa0838750:intron | 50.0% | |
| GTGCAGGTGATTAAGGACCA+TGG | - | chr5_4:13222493-13222512 | Msa0838750:intron | 50.0% | |
| !! | ATGTCCACTGGCCTTTGCTT+TGG | - | chr5_4:13223067-13223086 | Msa0838750:intron | 50.0% |
| GAATGCTGGCAAAGAAGCTG+AGG | - | chr5_4:13223506-13223525 | Msa0838750:intron | 50.0% | |
| GGGCTCCCATGTATCATAAC+TGG | + | chr5_4:13223760-13223779 | None:intergenic | 50.0% | |
| ACATACCTCAAGCCCTCGAT+GGG | + | chr5_4:13223780-13223799 | None:intergenic | 50.0% | |
| AACATACCTCAAGCCCTCGA+TGG | + | chr5_4:13223781-13223800 | None:intergenic | 50.0% | |
| GTGGTGAGACTTACAGGAAG+AGG | + | chr5_4:13223980-13223999 | None:intergenic | 50.0% | |
| TGAGGAGTGGTGAGACTTAC+AGG | + | chr5_4:13223986-13224005 | None:intergenic | 50.0% | |
| CCACTAACACCTTGACAAGG+TGG | + | chr5_4:13224129-13224148 | None:intergenic | 50.0% | |
| ! | CCACCTTGTCAAGGTGTTAG+TGG | - | chr5_4:13224126-13224145 | Msa0838750:intron | 50.0% |
| CAGGAACAAAAATGCGCCGT+TGG | - | chr5_4:13224161-13224180 | Msa0838750:intron | 50.0% | |
| GAACAAAAATGCGCCGTTGG+AGG | - | chr5_4:13224164-13224183 | Msa0838750:intron | 50.0% | |
| !! | TTTCTGGGGCGTTATGCTGT+GGG | - | chr5_4:13224294-13224313 | Msa0838750:intron | 50.0% |
| GAATGGGAATGATGGCTGCA+GGG | - | chr5_4:13224346-13224365 | Msa0838750:intron | 50.0% | |
| ATGATGGCTGCAGGGTCATA+TGG | - | chr5_4:13224354-13224373 | Msa0838750:intron | 50.0% | |
| CACGCATCCGAAATTGAGGA+AGG | + | chr5_4:13224380-13224399 | None:intergenic | 50.0% | |
| GAGCTCTTGCCACTGAAGTA+AGG | - | chr5_4:13224412-13224431 | Msa0838750:intron | 50.0% | |
| ! | GGCCAAGGCATTAAACCTTG+AGG | - | chr5_4:13224756-13224775 | Msa0838750:intron | 50.0% |
| GACTCTCAAAGTGCACCAAG+TGG | - | chr5_4:13225371-13225390 | Msa0838750:CDS | 50.0% | |
| GCAAACTTCAGGGACCTCAA+GGG | - | chr5_4:13225560-13225579 | Msa0838750:CDS | 50.0% | |
| GCTGAACACAACAGGCCATT+TGG | - | chr5_4:13225859-13225878 | Msa0838750:intron | 50.0% | |
| ! | ACAGGCCATTTGGTCGACTT+TGG | - | chr5_4:13225869-13225888 | Msa0838750:intron | 50.0% |
| ! | GCCATTTGGTCGACTTTGGT+GGG | - | chr5_4:13225873-13225892 | Msa0838750:intron | 50.0% |
| TCCCACCAAAGTCGACCAAA+TGG | + | chr5_4:13225877-13225896 | None:intergenic | 50.0% | |
| ! | GTTCTGGATGGAGAAGAACC+TGG | + | chr5_4:13226207-13226226 | None:intergenic | 50.0% |
| CGAGAGAATGCAAGGCTACA+AGG | - | chr5_4:13226247-13226266 | Msa0838750:intron | 50.0% | |
| TTTGTGGCCCTGTCAAACAG+AGG | - | chr5_4:13226290-13226309 | Msa0838750:intron | 50.0% | |
| CGAATGTGTATCCAAGGGCA+AGG | + | chr5_4:13226851-13226870 | None:intergenic | 50.0% | |
| AGCCAAGAATATTCAGGCCC+TGG | - | chr5_4:13227043-13227062 | Msa0838750:exon | 50.0% | |
| ! | GGCAGGTGCTGTATCGATCA+GGG | + | chr5_4:13222894-13222913 | None:intergenic | 55.0% |
| ! | TGGCAGGTGCTGTATCGATC+AGG | + | chr5_4:13222895-13222914 | None:intergenic | 55.0% |
| AGTTGCACGGACATTGGACC+CGG | + | chr5_4:13222954-13222973 | None:intergenic | 55.0% | |
| TGATACATGGGAGCCCATCG+AGG | - | chr5_4:13223764-13223783 | Msa0838750:CDS | 55.0% | |
| GATACATGGGAGCCCATCGA+GGG | - | chr5_4:13223765-13223784 | Msa0838750:CDS | 55.0% | |
| CTTGGCCCTGTACGAGAAAG+TGG | + | chr5_4:13224086-13224105 | None:intergenic | 55.0% | |
| !! | GTTTCTGGGGCGTTATGCTG+TGG | - | chr5_4:13224293-13224312 | Msa0838750:intron | 55.0% |
| TTATGCTGTGGGCCGTCTAG+TGG | - | chr5_4:13224305-13224324 | Msa0838750:intron | 55.0% | |
| CGAATGGGAATGATGGCTGC+AGG | - | chr5_4:13224345-13224364 | Msa0838750:intron | 55.0% | |
| GGCAAACTTCAGGGACCTCA+AGG | - | chr5_4:13225559-13225578 | Msa0838750:CDS | 55.0% | |
| ! | GGCCATTTGGTCGACTTTGG+TGG | - | chr5_4:13225872-13225891 | Msa0838750:intron | 55.0% |
| AAGGGCCGAGCCTCATAATC+AGG | - | chr5_4:13225921-13225940 | Msa0838750:intron | 55.0% | |
| !! | CACTGAGCGGGTTGAAGTGC+CGG | - | chr5_4:13220912-13220931 | Msa0838750:three_prime_UTR | 60.0% |
| !! | ACTGAGCGGGTTGAAGTGCC+GGG | - | chr5_4:13220913-13220932 | Msa0838750:three_prime_UTR | 60.0% |
| GGGTGTGGAGCTATGTCCAC+TGG | - | chr5_4:13223055-13223074 | Msa0838750:intron | 60.0% | |
| CGCTCCAAAGCAAAGGCCAG+TGG | + | chr5_4:13223074-13223093 | None:intergenic | 60.0% | |
| TATCCAAGGGCAAGGGCCAC+AGG | + | chr5_4:13226843-13226862 | None:intergenic | 60.0% | |
| TGTGGGGGGCCACCTTGTCA+AGG | - | chr5_4:13224117-13224136 | Msa0838750:intron | 65.0% | |
| GTTCCTGTGGCCCTTGCCCT+TGG | - | chr5_4:13226837-13226856 | Msa0838750:CDS | 65.0% | |
| GGGAGCCCATCGAGGGCTTG+AGG | - | chr5_4:13223772-13223791 | Msa0838750:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13220911 | 13227248 | 13220911 | ID=Msa0838750;Name=Msa0838750 |
| chr5_4 | mRNA | 13220911 | 13227248 | 13220911 | ID=Msa0838750-mRNA-1;Parent=Msa0838750;Name=Msa0838750-mRNA-1;_AED=0.10;_eAED=0.10;_QI=194|0.95|0.95|1|0.95|0.90|21|225|843 |
| chr5_4 | exon | 13220911 | 13221022 | 13220911 | ID=Msa0838750-mRNA-1:exon:5928;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13221063 | 13221350 | 13221063 | ID=Msa0838750-mRNA-1:exon:5927;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13221848 | 13221951 | 13221848 | ID=Msa0838750-mRNA-1:exon:5926;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13222217 | 13222286 | 13222217 | ID=Msa0838750-mRNA-1:exon:5925;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13222378 | 13222421 | 13222378 | ID=Msa0838750-mRNA-1:exon:5924;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13222501 | 13222602 | 13222501 | ID=Msa0838750-mRNA-1:exon:5923;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13222690 | 13222808 | 13222690 | ID=Msa0838750-mRNA-1:exon:5922;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13223170 | 13223257 | 13223170 | ID=Msa0838750-mRNA-1:exon:5921;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13223358 | 13223444 | 13223358 | ID=Msa0838750-mRNA-1:exon:5920;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13223529 | 13223621 | 13223529 | ID=Msa0838750-mRNA-1:exon:5919;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13223731 | 13224060 | 13223731 | ID=Msa0838750-mRNA-1:exon:5918;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13224174 | 13224240 | 13224174 | ID=Msa0838750-mRNA-1:exon:5917;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13224366 | 13224424 | 13224366 | ID=Msa0838750-mRNA-1:exon:5916;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13224509 | 13224757 | 13224509 | ID=Msa0838750-mRNA-1:exon:5915;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13224871 | 13224936 | 13224871 | ID=Msa0838750-mRNA-1:exon:5914;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13225039 | 13225253 | 13225039 | ID=Msa0838750-mRNA-1:exon:5913;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13225354 | 13225444 | 13225354 | ID=Msa0838750-mRNA-1:exon:5912;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13225541 | 13225660 | 13225541 | ID=Msa0838750-mRNA-1:exon:5911;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13225747 | 13225854 | 13225747 | ID=Msa0838750-mRNA-1:exon:5910;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13226618 | 13226717 | 13226618 | ID=Msa0838750-mRNA-1:exon:5909;Parent=Msa0838750-mRNA-1 |
| chr5_4 | exon | 13226810 | 13227248 | 13226810 | ID=Msa0838750-mRNA-1:exon:5908;Parent=Msa0838750-mRNA-1 |
| chr5_4 | five_prime_UTR | 13227055 | 13227248 | 13227055 | ID=Msa0838750-mRNA-1:five_prime_utr;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13226810 | 13227054 | 13226810 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13226618 | 13226717 | 13226618 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13225747 | 13225854 | 13225747 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13225541 | 13225660 | 13225541 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13225354 | 13225444 | 13225354 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13225039 | 13225253 | 13225039 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13224871 | 13224936 | 13224871 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13224509 | 13224757 | 13224509 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13224366 | 13224424 | 13224366 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13224174 | 13224240 | 13224174 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13223731 | 13224060 | 13223731 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13223529 | 13223621 | 13223529 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13223358 | 13223444 | 13223358 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13223170 | 13223257 | 13223170 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13222690 | 13222808 | 13222690 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13222501 | 13222602 | 13222501 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13222378 | 13222421 | 13222378 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13222217 | 13222286 | 13222217 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13221848 | 13221951 | 13221848 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | CDS | 13221176 | 13221350 | 13221176 | ID=Msa0838750-mRNA-1:cds;Parent=Msa0838750-mRNA-1 |
| chr5_4 | three_prime_UTR | 13221063 | 13221175 | 13221063 | ID=Msa0838750-mRNA-1:three_prime_utr;Parent=Msa0838750-mRNA-1 |
| chr5_4 | three_prime_UTR | 13220911 | 13221022 | 13220911 | ID=Msa0838750-mRNA-1:three_prime_utr;Parent=Msa0838750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
