AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233070 MtrunA17_Chr2g0280421 97.967 787 8 1 1 779 1 787 0.0 1580
Msa0233070 MtrunA17_Chr2g0319271 57.984 764 290 8 37 778 6 760 0.0 850
Msa0233070 MtrunA17_Chr4g0042061 58.399 762 289 6 37 778 39 792 0.0 850
Msa0233070 MtrunA17_Chr4g0049011 63.272 599 191 9 185 765 42 629 0.0 726
Msa0233070 MtrunA17_Chr4g0049011 35.484 217 111 6 56 257 3 205 4.33e-21 98.6
Msa0233070 MtrunA17_Chr2g0312631 42.298 409 225 6 360 766 318 717 1.36e-91 309
Msa0233070 MtrunA17_Chr7g0272871 45.985 411 204 10 363 769 66 462 1.37e-90 300
Msa0233070 MtrunA17_Chr7g0271961 46.197 355 170 7 417 764 389 729 4.77e-90 304
Msa0233070 MtrunA17_Chr1g0191851 47.486 358 175 7 416 769 134 482 4.18e-89 297
Msa0233070 MtrunA17_Chr1g0195111 44.475 362 171 9 417 764 384 729 4.55e-87 296
Msa0233070 MtrunA17_Chr1g0192481 43.175 359 181 7 417 764 46 392 2.54e-84 279
Msa0233070 MtrunA17_Chr5g0411971 44.236 373 199 7 395 766 365 729 1.65e-83 287
Msa0233070 MtrunA17_Chr5g0421591 43.164 373 203 7 395 766 340 704 7.50e-82 280
Msa0233070 MtrunA17_Chr5g0421521 43.164 373 203 7 395 766 340 704 1.22e-81 281
Msa0233070 MtrunA17_Chr5g0407791 36.276 521 282 13 284 770 717 1221 9.94e-80 279
Msa0233070 MtrunA17_Chr3g0102921 36.876 461 228 12 346 761 339 781 4.34e-78 273
Msa0233070 MtrunA17_Chr5g0447041 37.924 472 201 14 356 761 361 806 2.39e-77 271
Msa0233070 MtrunA17_Chr8g0369881 34.297 519 294 11 285 770 703 1207 8.09e-77 270
Msa0233070 MtrunA17_Chr7g0257301 36.975 476 245 12 330 764 288 749 1.39e-75 265
Msa0233070 MtrunA17_Chr1g0191181 38.071 394 214 8 381 759 36 414 2.48e-68 237
Msa0233070 MtrunA17_Chr4g0045381 40.000 350 176 10 426 754 190 526 1.68e-59 220
Msa0233070 MtrunA17_Chr2g0322291 43.854 301 139 7 475 754 130 421 1.28e-58 216
Msa0233070 MtrunA17_Chr4g0069141 38.950 362 175 9 420 754 144 486 8.06e-58 214
Msa0233070 MtrunA17_Chr8g0367581 39.167 360 200 8 416 773 133 475 8.41e-57 211
Msa0233070 MtrunA17_Chr2g0327581 37.960 353 197 10 420 754 39 387 9.00e-57 210
Msa0233070 MtrunA17_Chr1g0178411 38.244 353 182 12 429 754 13 356 6.16e-56 207
Msa0233070 MtrunA17_Chr7g0266631 36.729 373 210 9 429 779 9 377 1.64e-55 206
Msa0233070 MtrunA17_Chr3g0122121 39.080 348 175 11 430 754 99 432 4.72e-55 206
Msa0233070 MtrunA17_Chr1g0193221 35.942 345 186 9 430 758 4 329 1.23e-53 201
Msa0233070 MtrunA17_Chr8g0377731 37.088 364 190 11 415 755 40 387 8.14e-53 199
Msa0233070 MtrunA17_Chr1g0182151 37.861 346 189 11 429 754 54 393 1.04e-52 198
Msa0233070 MtrunA17_Chr1g0152231 36.578 339 188 9 430 754 4 329 1.58e-50 190
Msa0233070 MtrunA17_Chr3g0134191 36.464 362 184 10 430 755 9 360 1.80e-49 188
Msa0233070 MtrunA17_Chr1g0153061 36.288 361 186 10 430 755 9 360 5.19e-49 187
Msa0233070 MtrunA17_Chr5g0427481 34.463 354 187 9 430 755 18 354 1.20e-48 186
Msa0233070 MtrunA17_Chr5g0398521 34.072 361 198 10 426 759 54 401 6.91e-48 182
Msa0233070 MtrunA17_Chr2g0307481 40.351 285 154 7 475 754 119 392 1.02e-46 176
Msa0233070 MtrunA17_Chr4g0053211 34.232 371 194 12 429 759 12 372 2.60e-46 178
Msa0233070 MtrunA17_Chr7g0269681 48.023 177 92 0 588 764 23 199 4.47e-46 171
Msa0233070 MtrunA17_Chr3g0132921 34.097 349 194 10 429 754 9 344 7.09e-46 172
Msa0233070 MtrunA17_Chr5g0445211 35.475 358 189 11 422 755 67 406 1.35e-45 176
Msa0233070 MtrunA17_Chr4g0035661 35.860 343 198 10 427 764 87 412 4.51e-45 175
Msa0233070 MtrunA17_Chr7g0245931 33.333 360 201 9 426 759 49 395 5.21e-44 171
Msa0233070 MtrunA17_Chr3g0145071 35.294 340 200 9 429 764 99 422 1.39e-43 170
Msa0233070 MtrunA17_Chr8g0386891 52.667 150 71 0 615 764 13 162 1.89e-43 162
Msa0233070 MtrunA17_Chr6g0484501 50.299 167 83 0 598 764 26 192 2.40e-43 157
Msa0233070 MtrunA17_Chr6g0483701 35.191 341 182 10 430 754 31 348 8.94e-43 167
Msa0233070 MtrunA17_Chr4g0062291 37.884 293 167 7 475 762 176 458 1.20e-42 165
Msa0233070 MtrunA17_Chr3g0101021 33.714 350 194 10 429 757 75 407 1.49e-42 167
Msa0233070 MtrunA17_Chr7g0258991 35.000 340 199 10 427 760 71 394 7.87e-42 164
Msa0233070 MtrunA17_Chr4g0070001 33.508 382 209 12 401 759 112 471 1.83e-40 160
Msa0233070 MtrunA17_Chr4g0036001 32.961 358 212 9 407 753 1 341 1.64e-39 157
Msa0233070 MtrunA17_Chr8g0390991 51.572 159 77 0 606 764 4 162 1.06e-38 152
Msa0233070 MtrunA17_Chr8g0372171 32.647 340 192 8 430 753 20 338 2.53e-38 154
Msa0233070 MtrunA17_Chr5g0405181 32.059 340 194 8 430 753 21 339 4.91e-38 152
Msa0233070 MtrunA17_Chr2g0331761 35.948 306 170 10 464 761 224 511 1.65e-37 150
Msa0233070 MtrunA17_Chr6g0485471 35.714 322 181 10 464 777 154 457 3.06e-37 149
Msa0233070 MtrunA17_Chr7g0238581 33.923 339 193 11 430 754 26 347 1.92e-36 146
Msa0233070 MtrunA17_Chr3g0142261 34.234 333 195 8 430 753 20 337 2.45e-36 148
Msa0233070 MtrunA17_Chr8g0390981 36.184 304 137 13 297 588 414 672 2.67e-35 143
Msa0233070 MtrunA17_Chr2g0295881 32.759 406 225 14 387 765 157 541 5.27e-35 143
Msa0233070 MtrunA17_Chr7g0269691 36.145 249 124 9 357 588 326 556 7.98e-34 137
Msa0233070 MtrunA17_Chr6g0484511 43.094 181 77 6 417 585 277 443 1.45e-33 135
Msa0233070 MtrunA17_Chr4g0067421 31.844 358 206 11 430 765 206 547 1.52e-33 138
Msa0233070 MtrunA17_Chr8g0386901 42.105 190 73 8 414 585 468 638 2.30e-31 130
Msa0233070 MtrunA17_Chr1g0187411 32.110 327 179 12 475 774 171 481 2.08e-27 119
Msa0233070 MtrunA17_Chr6g0470541 29.054 296 184 13 468 759 46 319 1.42e-17 87.8
Msa0233070 MtrunA17_Chr3g0142841 27.562 283 149 9 477 733 145 397 6.29e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233070 AT4G21270.1 62.672 801 269 8 1 779 1 793 0.0 974
Msa0233070 AT4G05190.1 62.469 802 266 10 1 779 1 790 0.0 971
Msa0233070 AT4G05190.2 63.494 767 253 7 34 779 17 777 0.0 958
Msa0233070 AT5G54670.1 56.693 762 301 5 35 779 5 754 0.0 825
Msa0233070 AT5G54670.2 56.693 762 301 5 35 779 5 754 0.0 825
Msa0233070 AT4G27180.1 56.114 736 293 6 62 779 22 745 0.0 793
Msa0233070 AT4G27180.2 56.114 736 293 6 62 779 22 745 0.0 793
Msa0233070 AT5G54670.3 58.440 705 264 5 92 779 2 694 0.0 790
Msa0233070 AT1G73860.2 47.027 370 172 6 417 775 414 770 1.51e-94 316
Msa0233070 AT1G73860.1 46.917 373 174 6 414 775 494 853 4.80e-93 313
Msa0233070 AT5G27550.2 46.438 379 194 6 393 769 96 467 1.71e-90 301
Msa0233070 AT5G27550.1 46.438 379 194 6 393 769 96 467 1.71e-90 301
Msa0233070 AT1G72250.1 46.257 374 189 6 396 766 461 825 2.62e-90 308
Msa0233070 AT1G72250.2 46.257 374 189 6 396 766 470 834 2.87e-90 308
Msa0233070 AT1G72250.3 46.257 374 189 6 396 766 482 846 3.98e-90 308
Msa0233070 AT1G72250.4 46.257 374 189 6 396 766 481 845 4.14e-90 308
Msa0233070 AT5G27000.1 41.860 430 211 12 350 764 322 727 1.81e-89 303
Msa0233070 AT1G09170.4 40.952 420 227 9 355 764 358 766 3.82e-89 299
Msa0233070 AT1G09170.3 40.952 420 227 9 355 764 358 766 4.16e-89 298
Msa0233070 AT1G09170.7 40.952 420 227 9 355 764 358 766 4.16e-89 298
Msa0233070 AT2G47500.2 40.047 422 238 7 350 764 317 730 5.10e-89 301
Msa0233070 AT2G47500.1 40.047 422 238 7 350 764 317 730 5.58e-89 301
Msa0233070 AT1G09170.2 40.952 420 227 9 355 764 358 766 1.53e-88 298
Msa0233070 AT1G09170.5 40.952 420 227 9 355 764 358 766 4.58e-88 300
Msa0233070 AT1G18410.3 45.954 346 184 3 417 761 477 820 5.10e-88 299
Msa0233070 AT1G18410.2 45.954 346 184 3 417 761 477 820 5.10e-88 299
Msa0233070 AT1G63640.3 35.263 570 340 15 210 761 245 803 1.02e-87 300
Msa0233070 AT1G63640.1 35.263 570 340 15 210 761 245 803 1.05e-87 300
Msa0233070 AT1G63640.4 35.263 570 340 15 210 761 245 803 1.05e-87 300
Msa0233070 AT1G63640.5 35.263 570 340 15 210 761 235 793 1.16e-87 299
Msa0233070 AT1G63640.2 35.263 570 333 15 210 761 245 796 7.10e-87 297
Msa0233070 AT1G18410.5 45.272 349 180 3 414 761 464 802 1.96e-86 295
Msa0233070 AT1G18410.4 45.845 349 186 3 414 761 617 963 3.90e-86 296
Msa0233070 AT2G22610.2 45.763 354 181 6 416 767 404 748 4.05e-86 295
Msa0233070 AT2G22610.3 45.763 354 181 6 416 767 405 749 5.96e-86 295
Msa0233070 AT2G22610.1 45.763 354 181 6 416 767 404 748 6.01e-86 295
Msa0233070 AT1G18410.1 45.272 349 180 3 414 761 617 955 1.65e-84 291
Msa0233070 AT5G41310.1 37.525 509 243 14 288 764 273 738 2.38e-84 288
Msa0233070 AT3G10310.2 42.577 357 184 5 417 764 351 695 2.97e-80 277
Msa0233070 AT3G10310.1 42.577 357 184 5 417 764 351 695 3.21e-80 277
Msa0233070 AT3G44730.2 40.997 361 182 6 419 764 412 756 1.41e-79 278
Msa0233070 AT3G44730.3 40.997 361 182 6 419 764 412 756 1.41e-79 278
Msa0233070 AT3G44730.1 40.997 361 182 6 419 764 367 711 1.55e-79 277
Msa0233070 AT3G44730.4 40.997 361 182 6 419 764 367 711 1.55e-79 277
Msa0233070 AT5G65930.3 40.214 373 208 7 401 770 866 1226 2.33e-78 275
Msa0233070 AT5G65930.2 40.214 373 208 7 401 770 860 1220 2.46e-78 275
Msa0233070 AT5G65930.1 40.214 373 208 7 401 770 859 1219 2.52e-78 275
Msa0233070 AT1G09170.1 38.902 419 201 9 355 764 358 730 2.02e-76 267
Msa0233070 AT1G55550.1 39.566 369 204 6 398 761 60 414 4.66e-75 261
Msa0233070 AT1G09170.6 40.263 380 206 9 355 724 358 726 1.54e-74 257
Msa0233070 AT1G09170.8 40.263 380 206 9 355 724 358 726 1.54e-74 257
Msa0233070 AT5G27950.1 38.118 425 225 11 352 759 2 405 2.16e-72 249
Msa0233070 AT3G19050.1 44.257 296 145 6 475 754 235 526 5.53e-59 219
Msa0233070 AT3G17360.1 39.595 346 177 8 429 754 168 501 8.96e-59 218
Msa0233070 AT3G17360.2 39.595 346 177 8 429 754 168 501 9.74e-59 218
Msa0233070 AT3G17360.3 39.595 346 177 8 429 754 168 501 1.04e-58 218
Msa0233070 AT5G65460.2 33.813 417 251 6 357 773 76 467 1.32e-58 216
Msa0233070 AT3G45850.2 39.244 344 186 10 429 754 55 393 1.52e-58 216
Msa0233070 AT3G45850.1 39.244 344 186 10 429 754 55 393 1.52e-58 216
Msa0233070 AT5G65460.6 33.813 417 251 6 357 773 76 467 1.67e-58 216
Msa0233070 AT5G65460.4 33.813 417 251 6 357 773 76 467 2.59e-58 216
Msa0233070 AT5G65460.1 33.813 417 251 6 357 773 76 467 3.13e-58 216
Msa0233070 AT5G65460.3 33.492 421 254 6 357 773 76 474 8.07e-58 214
Msa0233070 AT5G10470.2 33.716 436 250 8 363 775 58 477 4.85e-56 209
Msa0233070 AT5G10470.1 33.716 436 250 8 363 775 58 477 5.66e-56 209
Msa0233070 AT3G44050.1 39.826 344 179 9 429 754 93 426 6.97e-56 209
Msa0233070 AT2G28620.1 38.551 345 187 10 429 754 50 388 3.50e-55 206
Msa0233070 AT2G28620.3 38.551 345 187 10 429 754 50 388 3.53e-55 206
Msa0233070 AT2G28620.2 38.551 345 187 10 429 754 50 388 3.53e-55 206
Msa0233070 AT2G36200.1 37.931 377 200 12 429 779 12 380 3.91e-55 206
Msa0233070 AT2G36200.2 37.931 377 200 12 429 779 12 380 8.43e-55 205
Msa0233070 AT4G14150.1 38.000 350 179 12 430 757 92 425 6.41e-53 199
Msa0233070 AT2G37420.1 36.994 346 191 10 429 754 48 386 1.36e-51 195
Msa0233070 AT2G37420.2 36.994 346 191 10 429 754 48 386 1.36e-51 195
Msa0233070 AT3G10180.2 35.072 345 190 8 430 758 4 330 6.06e-51 194
Msa0233070 AT3G10180.1 35.072 345 190 8 430 758 4 330 6.07e-51 194
Msa0233070 AT1G59540.1 36.747 332 189 10 430 754 4 321 6.89e-51 191
Msa0233070 AT3G23670.2 37.644 348 179 11 430 755 97 428 1.10e-50 192
Msa0233070 AT3G23670.1 37.356 348 180 10 430 755 97 428 1.71e-50 192
Msa0233070 AT4G39050.1 36.034 358 209 9 413 766 82 423 2.60e-48 185
Msa0233070 AT5G47820.2 35.598 368 183 13 429 754 11 366 1.08e-47 183
Msa0233070 AT5G47820.1 35.598 368 183 13 429 754 11 366 1.08e-47 183
Msa0233070 AT2G21380.2 36.390 349 198 10 422 764 97 427 1.50e-47 183
Msa0233070 AT2G21380.1 36.390 349 198 10 422 764 97 427 1.50e-47 183
Msa0233070 AT3G54870.1 36.577 298 163 7 474 754 149 437 1.86e-47 182
Msa0233070 AT3G54870.3 36.577 298 163 7 474 754 149 437 1.89e-47 182
Msa0233070 AT3G63480.2 37.135 342 185 13 429 754 3 330 2.11e-47 175
Msa0233070 AT3G54870.2 36.577 298 163 7 474 754 149 437 2.68e-47 182
Msa0233070 AT1G12430.1 33.989 356 196 10 430 759 71 413 6.97e-47 180
Msa0233070 AT1G12430.2 33.989 356 196 10 430 759 71 413 7.00e-47 180
Msa0233070 AT3G63480.1 36.994 346 184 14 429 754 3 334 1.57e-46 173
Msa0233070 AT1G21730.1 36.232 345 198 9 426 764 72 400 1.89e-45 176
Msa0233070 AT1G01950.2 33.611 360 200 9 426 759 57 403 1.07e-44 173
Msa0233070 AT5G06670.2 34.402 343 203 10 424 760 61 387 1.13e-44 174
Msa0233070 AT5G06670.3 34.402 343 203 10 424 760 61 387 1.13e-44 174
Msa0233070 AT1G18550.1 38.380 284 161 6 475 754 204 477 1.34e-44 172
Msa0233070 AT1G01950.1 33.611 360 200 9 426 759 57 403 1.52e-44 173
Msa0233070 AT3G50240.1 34.349 361 191 10 430 754 26 376 1.99e-44 173
Msa0233070 AT3G50240.2 34.349 361 191 10 430 754 26 376 2.14e-44 173
Msa0233070 AT3G50240.4 34.349 361 191 10 430 754 26 376 2.19e-44 173
Msa0233070 AT1G01950.3 33.611 360 200 9 426 759 57 403 2.71e-44 172
Msa0233070 AT5G06670.5 34.402 343 203 10 424 760 61 387 4.24e-44 171
Msa0233070 AT5G06670.8 34.402 343 203 10 424 760 61 387 6.22e-44 170
Msa0233070 AT5G06670.4 34.402 343 203 10 424 760 61 387 6.22e-44 170
Msa0233070 AT5G06670.7 34.402 343 203 10 424 760 61 387 6.22e-44 170
Msa0233070 AT5G60930.3 33.702 362 193 12 430 755 7 357 1.74e-43 171
Msa0233070 AT5G60930.2 33.702 362 193 12 430 755 7 357 2.21e-43 170
Msa0233070 AT5G60930.1 33.795 361 192 12 430 754 7 356 2.46e-43 170
Msa0233070 AT1G18370.1 35.777 341 180 11 430 754 32 349 3.29e-43 169
Msa0233070 AT5G06670.6 33.807 352 202 11 424 760 61 396 4.03e-43 169
Msa0233070 AT5G06670.1 33.807 352 202 11 424 760 61 396 4.03e-43 169
Msa0233070 AT3G12020.4 33.824 340 203 9 427 760 67 390 7.97e-43 168
Msa0233070 AT3G12020.1 33.824 340 203 9 427 760 67 390 7.97e-43 168
Msa0233070 AT3G12020.3 33.824 340 203 9 427 760 67 390 3.44e-42 166
Msa0233070 AT3G12020.2 33.824 340 203 9 427 760 67 390 3.44e-42 166
Msa0233070 AT3G49650.1 35.505 307 183 6 475 777 66 361 4.20e-40 159
Msa0233070 AT3G51150.2 35.889 287 162 6 474 753 65 336 1.14e-39 158
Msa0233070 AT3G51150.4 35.889 287 162 6 474 753 65 336 1.14e-39 158
Msa0233070 AT3G51150.3 35.889 287 162 6 474 753 65 336 1.14e-39 158
Msa0233070 AT3G51150.1 35.889 287 162 6 474 753 65 336 1.20e-39 158
Msa0233070 AT3G43210.3 36.667 330 185 9 430 752 30 342 1.79e-39 157
Msa0233070 AT3G43210.5 36.667 330 185 9 430 752 30 342 1.79e-39 157
Msa0233070 AT3G43210.2 36.667 330 185 9 430 752 30 342 1.79e-39 157
Msa0233070 AT3G43210.4 36.667 330 185 9 430 752 30 342 1.79e-39 157
Msa0233070 AT3G43210.1 36.667 330 185 9 430 752 30 342 1.79e-39 157
Msa0233070 AT2G21300.2 32.682 358 211 10 407 752 1 340 1.04e-38 155
Msa0233070 AT2G21300.4 32.682 358 211 10 407 752 1 340 1.04e-38 155
Msa0233070 AT2G21300.3 32.682 358 211 10 407 752 1 340 1.04e-38 155
Msa0233070 AT2G21300.1 32.682 358 211 10 407 752 1 340 1.04e-38 155
Msa0233070 AT2G21300.5 32.682 358 211 10 407 752 1 340 1.04e-38 155
Msa0233070 AT5G66310.2 35.540 287 163 6 474 753 66 337 2.73e-38 154
Msa0233070 AT5G66310.3 35.540 287 163 6 474 753 66 337 2.73e-38 154
Msa0233070 AT5G66310.1 35.540 287 163 6 474 753 66 337 2.73e-38 154
Msa0233070 AT3G16060.1 34.593 344 195 11 430 761 170 495 1.14e-37 150
Msa0233070 AT4G38950.3 33.832 334 194 9 430 753 14 330 1.35e-37 151
Msa0233070 AT4G38950.5 33.832 334 194 9 430 753 14 330 1.35e-37 151
Msa0233070 AT4G38950.4 33.832 334 194 9 430 753 14 330 1.35e-37 151
Msa0233070 AT4G38950.1 33.832 334 194 9 430 753 14 330 1.35e-37 151
Msa0233070 AT4G38950.2 33.832 334 194 9 430 753 14 330 1.35e-37 151
Msa0233070 AT5G27950.2 40.164 244 127 6 528 759 3 239 1.70e-37 147
Msa0233070 AT4G24170.1 36.458 288 164 7 472 753 47 321 2.28e-37 151
Msa0233070 AT4G24170.2 36.458 288 164 7 472 753 47 321 2.28e-37 151
Msa0233070 AT3G20150.1 35.430 302 168 8 475 754 136 432 5.16e-37 150
Msa0233070 AT3G20150.2 35.430 302 168 8 475 754 136 432 6.25e-37 150
Msa0233070 AT5G02370.1 32.440 336 198 10 429 754 20 336 7.16e-37 147
Msa0233070 AT1G59540.2 39.496 238 129 7 523 754 1 229 4.00e-36 146
Msa0233070 AT1G01950.4 35.055 271 146 6 510 759 1 262 1.32e-35 145
Msa0233070 AT3G50240.3 36.201 279 143 7 514 759 3 279 1.37e-34 142
Msa0233070 AT4G14330.1 33.904 292 164 9 475 754 89 363 3.98e-31 131
Msa0233070 AT3G16630.2 32.372 312 175 8 464 757 232 525 8.82e-31 130
Msa0233070 AT3G16630.1 32.372 312 175 8 464 757 232 525 8.82e-31 130
Msa0233070 AT5G42490.2 34.764 233 132 5 474 701 55 272 3.22e-26 116
Msa0233070 AT5G42490.1 34.764 233 132 5 474 701 55 272 3.23e-26 116
Msa0233070 AT5G65460.5 33.945 218 135 2 556 773 13 221 6.56e-26 115
Msa0233070 AT3G51150.5 37.952 166 97 2 594 753 18 183 3.32e-20 96.7
Msa0233070 AT5G23910.2 27.483 302 195 11 455 755 41 319 3.54e-17 86.7
Msa0233070 AT5G23910.1 27.483 302 195 11 455 755 37 315 4.22e-17 86.3
Msa0233070 AT1G20060.10 26.910 301 188 8 449 735 143 425 1.25e-13 75.5
Msa0233070 AT1G20060.4 27.368 285 181 7 465 735 153 425 1.27e-13 75.5
Msa0233070 AT1G20060.7 27.368 285 181 7 465 735 153 425 1.29e-13 75.5
Msa0233070 AT1G20060.5 27.368 285 181 7 465 735 153 425 1.32e-13 75.5
Msa0233070 AT1G20060.6 26.910 301 188 8 449 735 143 425 1.32e-13 75.5
Msa0233070 AT1G20060.8 27.368 285 181 7 465 735 153 425 1.33e-13 75.5
Msa0233070 AT1G20060.2 27.368 285 181 7 465 735 153 425 1.36e-13 75.5
Msa0233070 AT1G20060.9 27.368 285 181 7 465 735 153 425 1.45e-13 75.1
Msa0233070 AT1G20060.3 26.910 301 188 8 449 735 143 425 1.55e-13 75.1

Find 194 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGCTCAGCTTCATTTC+TGG 0.062764 2_2:+5411669 None:intergenic
AGTACAAATAATAGTTATTT+TGG 0.160615 2_2:+5406808 None:intergenic
AAACTGTGTTAGATGGTTTA+AGG 0.187874 2_2:-5412518 Msa0233070:CDS
GAACTTAATGCATGCATTAT+TGG 0.195856 2_2:+5406472 None:intergenic
ATTATGTTAGGAATCGATTA+TGG 0.207331 2_2:+5413125 None:intergenic
ATTGACTGAGAAGATGAAAA+AGG 0.208674 2_2:-5412681 Msa0233070:CDS
TTGGTGCCCGATTCTGATTC+CGG 0.256816 2_2:+5413075 None:intergenic
CACTTCCAGCAAGATCTATC+AGG 0.288224 2_2:+5407663 None:intergenic
GCTTATGGACAAACAGGTTC+TGG 0.290734 2_2:-5408835 Msa0233070:CDS
TAAAGCTTCTACTTCCTCTT+TGG 0.301265 2_2:+5412703 None:intergenic
ATCGCGTTTGGGAAAATGTT+AGG 0.304116 2_2:+5413151 None:intergenic
AGCAAAATACAAAGAGTATA+CGG 0.304920 2_2:-5410770 Msa0233070:CDS
AAAGGAGGAATCAGATAAAT+TGG 0.309235 2_2:-5411817 Msa0233070:intron
ATAATATTGTACTTCTTTCC+AGG 0.310435 2_2:+5408531 None:intergenic
AGGACACCTTAGTTTCATTC+AGG 0.324431 2_2:+5407606 None:intergenic
CTGTGTATATAGGAATTAAA+AGG 0.332956 2_2:-5409938 Msa0233070:intron
AAAATTGCACAACACTATTC+TGG 0.333020 2_2:-5410055 Msa0233070:intron
TGCTACTTCACAAGGTTGAT+TGG 0.333241 2_2:-5406555 Msa0233070:three_prime_UTR
GCGTTGTGTTGTTCTAAGTA+TGG 0.352269 2_2:-5406764 Msa0233070:three_prime_UTR
CGATTATGGGAAATCGCGTT+TGG 0.352300 2_2:+5413139 None:intergenic
ATTCGTACGTTGGAGGGGCT+TGG 0.353658 2_2:+5413056 None:intergenic
AAGAGGATCATGTCCCCTTT+AGG 0.361084 2_2:-5407438 Msa0233070:CDS
CGAAGCACTTCATGTCTTCC+CGG 0.362319 2_2:-5413094 Msa0233070:exon
TTCGTAGAATGGATTATGTT+AGG 0.367569 2_2:+5413113 None:intergenic
ACGAGAATCAGAGGCCTTCA+TGG 0.370766 2_2:+5406885 None:intergenic
AGCAAGGTCTGCTTACAAAA+TGG 0.376347 2_2:-5406848 Msa0233070:three_prime_UTR
GGACAAGTACAAGCTTTAAC+TGG 0.378100 2_2:-5410799 Msa0233070:CDS
CTAGTACAAAGCGCGCTTGA+TGG 0.387803 2_2:-5409591 Msa0233070:CDS
ATTTGACAAAGTATTTAATC+AGG 0.390087 2_2:-5409652 Msa0233070:CDS
CACCGTTTGTGTTTCCGAAA+AGG 0.391802 2_2:+5410167 None:intergenic
CAAATGTAAAAGAGTACTTC+TGG 0.392789 2_2:+5409670 None:intergenic
AGACGACCGTGATCGCCAAT+TGG 0.393122 2_2:-5410821 Msa0233070:CDS
GTCAGTTTAGAATTCCTAAA+GGG 0.396349 2_2:+5407424 None:intergenic
TTTGGGAAAATGTTAGGGTT+TGG 0.396980 2_2:+5413157 None:intergenic
TGGTGATAACAAATCCCTTA+TGG 0.398847 2_2:+5408563 None:intergenic
CTGTCGAAAAGTGGAGCAAC+TGG 0.402225 2_2:-5407635 Msa0233070:CDS
GAGAACCTTAGCAATGTTAG+AGG 0.403284 2_2:-5411322 Msa0233070:CDS
TTATGTTAGGAATCGATTAT+GGG 0.404543 2_2:+5413126 None:intergenic
TGCCGAAAAGGAGAAGTTAA+AGG 0.405884 2_2:-5410558 Msa0233070:intron
TGGTGCCCGATTCTGATTCC+GGG 0.408148 2_2:+5413076 None:intergenic
GATTATGGGAAATCGCGTTT+GGG 0.410242 2_2:+5413140 None:intergenic
TGCAATCTTCTCTTCTAAAG+AGG 0.410883 2_2:+5411839 None:intergenic
CAATGTTAGAGGCCACAATA+AGG 0.415649 2_2:-5411311 Msa0233070:CDS
CAGTTGTTAACAACATGCTT+TGG 0.416220 2_2:-5406520 Msa0233070:three_prime_UTR
GGTATCAAGCCTTTCAGCTC+AGG 0.418353 2_2:+5408778 None:intergenic
GCAGTACAATAGTAGCCTTC+AGG 0.425443 2_2:-5411407 Msa0233070:CDS
ATGTCTCTCCTTCAATTACT+TGG 0.426819 2_2:+5410085 None:intergenic
GGGGAATCCCCTTGATACTA+AGG 0.429097 2_2:-5412660 Msa0233070:intron
TGGTTTAAGGTAGTTGAAGA+AGG 0.432648 2_2:-5412505 Msa0233070:CDS
CTGAAGAAAACAAGCGTAGA+AGG 0.434251 2_2:-5412859 Msa0233070:CDS
TCTTGGTCGAGGTGTTGAAT+TGG 0.435479 2_2:-5409822 Msa0233070:CDS
TTCCTTTGGCAGCCATGTCT+CGG 0.437106 2_2:-5407039 Msa0233070:intron
CCTTCATCAACAGAAGCTCT+TGG 0.439950 2_2:-5409839 Msa0233070:CDS
AAGCTTGTACTTGTCCCAAT+TGG 0.441758 2_2:+5410806 None:intergenic
AAATATACAACGAGACCATA+AGG 0.443809 2_2:-5408578 Msa0233070:CDS
AGTGTTGTGTTGTGTTGTGT+TGG 0.448166 2_2:+5413180 None:intergenic
TTTGTAGAACACTGAACAAC+AGG 0.448634 2_2:-5407702 Msa0233070:intron
GTCTTTACTCTGCGAATAAG+TGG 0.453349 2_2:-5407806 Msa0233070:CDS
CAGAGGCCTTCATGGATGTC+TGG 0.455681 2_2:+5406893 None:intergenic
TGTTTCCGAAAAGGACAAAT+CGG 0.457287 2_2:+5410176 None:intergenic
TGTCTTCCCGGAATCAGAAT+CGG 0.460343 2_2:-5413082 Msa0233070:CDS
CTTATTATCGTAGGCTTCAC+AGG 0.460635 2_2:-5410917 Msa0233070:intron
ACATGAAGTGCTTCGTAGAA+TGG 0.462754 2_2:+5413102 None:intergenic
TCGCGTTTGGGAAAATGTTA+GGG 0.462938 2_2:+5413152 None:intergenic
AGAGTAAATAGTTGTGAGAT+TGG 0.463792 2_2:-5406928 Msa0233070:CDS
ATATCACAGCTAAATGATAC+AGG 0.464673 2_2:+5406659 None:intergenic
CTAAACCTGATAGATCTTGC+TGG 0.466294 2_2:-5407668 Msa0233070:CDS
TATACGATGATTGGCAGGCC+TGG 0.470233 2_2:-5408805 Msa0233070:CDS
AGAAAGATACCTTAGTATCA+AGG 0.474402 2_2:+5412651 None:intergenic
TCTGATTCTCGTTTGAGCTA+TGG 0.478605 2_2:-5406874 Msa0233070:CDS
GTGTTGTGTTGTGTTGTGTT+GGG 0.478922 2_2:+5413181 None:intergenic
CCAAGAGCTTCTGTTGATGA+AGG 0.481684 2_2:+5409839 None:intergenic
CTCTCCAGTCGAAGATGGAT+CGG 0.481913 2_2:+5406978 None:intergenic
GGTAGAGGTAGGGCTCCATT+AGG 0.483847 2_2:-5412809 Msa0233070:CDS
AGGCCTGCCAATCATCGTAT+AGG 0.484741 2_2:+5408807 None:intergenic
AAAGAGCTCCAAGTAATTGA+AGG 0.484829 2_2:-5410093 Msa0233070:CDS
AGTGTCTGATTTGTTGTTGA+GGG 0.484894 2_2:+5412784 None:intergenic
GCAAAATACAAAGAGTATAC+GGG 0.486051 2_2:-5410769 Msa0233070:CDS
GACGACCGTGATCGCCAATT+GGG 0.489134 2_2:-5410820 Msa0233070:CDS
GAGATCAGCTGCTGAGCGGC+AGG 0.490016 2_2:-5411605 Msa0233070:intron
AAGGGGATTCGTACGTTGGA+GGG 0.490945 2_2:+5413050 None:intergenic
CTTGTCCCAATTGGCGATCA+CGG 0.491249 2_2:+5410815 None:intergenic
AGTCAGTCTCTGAAAGATCA+AGG 0.495751 2_2:-5408727 Msa0233070:CDS
TAAACTGACAACCCTTCTCC+AGG 0.499188 2_2:-5407410 Msa0233070:intron
ATGATCCTCTTTCTTTGCCA+AGG 0.501059 2_2:+5407450 None:intergenic
CGCAAACATCCACAATAGTC+AGG 0.502674 2_2:+5408472 None:intergenic
TAATCAGGAGGCTTCACAGC+AGG 0.503502 2_2:-5409637 Msa0233070:CDS
GAAGACCAGAAAAGAACTAT+AGG 0.503985 2_2:-5410141 Msa0233070:CDS
AGAAGAGAAGATTGCAAAGG+AGG 0.504573 2_2:-5411832 Msa0233070:CDS
CTCAGATCCCTCGGTTGCAC+CGG 0.505367 2_2:+5412745 None:intergenic
ATGAGGCTATATCAAATTTG+AGG 0.505449 2_2:-5411872 Msa0233070:CDS
TTATCACCAACAGAAAATCC+TGG 0.506217 2_2:-5408549 Msa0233070:CDS
CTGACTATTGTGGATGTTTG+CGG 0.506956 2_2:-5408471 Msa0233070:CDS
AAGGATTGGTGGTGAAAGAA+TGG 0.506993 2_2:-5412840 Msa0233070:CDS
GAAAACAAGCGTAGAAGGAT+TGG 0.508678 2_2:-5412854 Msa0233070:CDS
GAATTGAGCTTGTAGTGGCT+TGG 0.509237 2_2:-5406715 Msa0233070:three_prime_UTR
CGATGGTCCTGCAGCAGACA+TGG 0.509803 2_2:-5409873 Msa0233070:CDS
GAAAGATACCTTAGTATCAA+GGG 0.511185 2_2:+5412652 None:intergenic
GCCGGTGCCGGTGCAACCGA+GGG 0.511321 2_2:-5412752 Msa0233070:CDS
ATCGTAGGCTTCACAGGAAG+AGG 0.511331 2_2:-5410911 Msa0233070:intron
AAGCTTAGCAAACCTGGAGA+AGG 0.512030 2_2:+5407398 None:intergenic
ACATCCACAATAGTCAGGTC+TGG 0.512155 2_2:+5408477 None:intergenic
GTCTTCCCGGAATCAGAATC+GGG 0.512430 2_2:-5413081 Msa0233070:CDS
TGTCAGTTTAGAATTCCTAA+AGG 0.512616 2_2:+5407423 None:intergenic
GCAGCAGTTGAATGCCGAAA+AGG 0.513553 2_2:-5410570 Msa0233070:CDS
ATCAAGCCTTTCAGCTCAGG+GGG 0.514006 2_2:+5408781 None:intergenic
GGTTTAAGGTAGTTGAAGAA+GGG 0.514193 2_2:-5412504 Msa0233070:CDS
TAAAACAAGCTGCACAAAGC+AGG 0.514209 2_2:-5408425 Msa0233070:intron
TGTGGCCTCTAACATTGCTA+AGG 0.517231 2_2:+5411317 None:intergenic
AACACTGAACAACAGGTTCA+AGG 0.519891 2_2:-5407695 Msa0233070:CDS
TGCCGGTGCCGGTGCAACCG+AGG 0.521826 2_2:-5412753 Msa0233070:CDS
AGTGACTCTCCAGTCGAAGA+TGG 0.523019 2_2:+5406973 None:intergenic
TAAGGCATTGCAAGAGCAGT+TGG 0.523880 2_2:-5411293 Msa0233070:CDS
GGGGAAATCAAGTGAACAGT+TGG 0.524619 2_2:-5410749 Msa0233070:CDS
TCTGCTGCAGGACCATCGTC+TGG 0.525629 2_2:+5409878 None:intergenic
TTGGTGAATTCAATGATGCT+CGG 0.528027 2_2:+5412722 None:intergenic
GATGCTCGGCTCAGATCCCT+CGG 0.531050 2_2:+5412736 None:intergenic
ACTAATGATGGTGCCGGTGC+CGG 0.531226 2_2:-5412764 Msa0233070:CDS
GTCGAACACGGCAGAACACA+CGG 0.533434 2_2:+5409909 None:intergenic
ACTTCACAAGGTTGATTGGA+TGG 0.533438 2_2:-5406551 Msa0233070:three_prime_UTR
TCTCCAGTCGAAGATGGATC+GGG 0.533509 2_2:+5406979 None:intergenic
GTATCAAGCCTTTCAGCTCA+GGG 0.534634 2_2:+5408779 None:intergenic
TCCCTCGGTTGCACCGGCAC+CGG 0.536812 2_2:+5412751 None:intergenic
AGTGAAAGGCTGTCGAAAAG+TGG 0.538792 2_2:-5407644 Msa0233070:CDS
GCGAATAAGTGGTGTTAATG+AGG 0.541828 2_2:-5407795 Msa0233070:intron
TGAACAGTTGGGTACATTGA+CGG 0.545355 2_2:-5410737 Msa0233070:CDS
TGGTCGTACAAGGTAGAGGT+AGG 0.547218 2_2:-5412820 Msa0233070:CDS
AGAATGGTCGTACAAGGTAG+AGG 0.549823 2_2:-5412824 Msa0233070:CDS
AACAAATCAGACACTAATGA+TGG 0.550885 2_2:-5412776 Msa0233070:CDS
GTTGTGAGATTGGTATTCCT+CGG 0.552840 2_2:-5406918 Msa0233070:CDS
AAACCTATACGATGATTGGC+AGG 0.553852 2_2:-5408810 Msa0233070:CDS
TTGTTGTTGAGGGAACCTAA+TGG 0.555010 2_2:+5412794 None:intergenic
TCAACAGAAGCTCTTGGTCG+AGG 0.555040 2_2:-5409833 Msa0233070:CDS
AGCTTAGCAAACCTGGAGAA+GGG 0.558152 2_2:+5407399 None:intergenic
TGACAAAGTATTTAATCAGG+AGG 0.563530 2_2:-5409649 Msa0233070:CDS
GTAACTACCATGTCTGCTGC+AGG 0.564380 2_2:+5409866 None:intergenic
GCTCTTGCAATGCCTTATTG+TGG 0.566836 2_2:+5411299 None:intergenic
AATATACAACGAGACCATAA+GGG 0.569199 2_2:-5408577 Msa0233070:CDS
GGACCGCCTGAATGAAACTA+AGG 0.569652 2_2:-5407612 Msa0233070:intron
GGTGAAAGAATGGTCGTACA+AGG 0.569997 2_2:-5412830 Msa0233070:CDS
AATATTATACACGATGCCAA+TGG 0.576558 2_2:-5408516 Msa0233070:CDS
GAAGGGGATTCGTACGTTGG+AGG 0.576763 2_2:+5413049 None:intergenic
TTAGAGAATTGAGCTTGTAG+TGG 0.577572 2_2:-5406720 Msa0233070:three_prime_UTR
AGGTCAACTACGAGAGAGAC+TGG 0.580028 2_2:-5410121 Msa0233070:CDS
TCAGACACTAATGATGGTGC+CGG 0.580091 2_2:-5412770 Msa0233070:CDS
TGTCGAAAAGTGGAGCAACT+GGG 0.581699 2_2:-5407634 Msa0233070:CDS
TTAATTCTTGCTACTTCACA+AGG 0.583502 2_2:-5406563 Msa0233070:three_prime_UTR
TCACCCGATCCATCTTCGAC+TGG 0.584762 2_2:-5406982 Msa0233070:CDS
CTGCGTCAAGATTTGCCTGA+AGG 0.587275 2_2:+5411392 None:intergenic
CTCACAACTATTTACTCTCG+CGG 0.590699 2_2:+5406933 None:intergenic
TCGGCGCCAGACATCCATGA+AGG 0.590942 2_2:-5406899 Msa0233070:CDS
AACAAGCGTAGAAGGATTGG+TGG 0.591754 2_2:-5412851 Msa0233070:CDS
TAGTGTCTGATTTGTTGTTG+AGG 0.594810 2_2:+5412783 None:intergenic
AAATCTTGACGCAGCTAGTG+CGG 0.595844 2_2:-5411383 Msa0233070:CDS
TTCACAGGAAGAGGCTACAA+AGG 0.596994 2_2:-5410902 Msa0233070:CDS
GGCTAAAACAAATGCTCTCG+AGG 0.602060 2_2:-5410716 Msa0233070:intron
CAAGAGCTTCTGTTGATGAA+GGG 0.602107 2_2:+5409840 None:intergenic
GGGAAATCAAGTGAACAGTT+GGG 0.602202 2_2:-5410748 Msa0233070:CDS
AGGGGATTCGTACGTTGGAG+GGG 0.603372 2_2:+5413051 None:intergenic
TTTAGAAGAGAAGATTGCAA+AGG 0.605569 2_2:-5411835 Msa0233070:CDS
TAGATCTTGCTGGAAGTGAA+AGG 0.608964 2_2:-5407658 Msa0233070:CDS
TTAGAATCTCCACCGAGACA+TGG 0.608991 2_2:+5407027 None:intergenic
GGACCATCGTCTGGTAGCAA+AGG 0.611454 2_2:+5409887 None:intergenic
CTTTCAGAGACTGACTAACA+AGG 0.611946 2_2:+5408734 None:intergenic
CTGGTAGCAAAGGTCGAACA+CGG 0.614369 2_2:+5409897 None:intergenic
GAAGATAGCAGAATTGAATG+AGG 0.614886 2_2:-5411889 Msa0233070:intron
TTGCGAGATCAGCTGCTGAG+CGG 0.616497 2_2:-5411609 Msa0233070:CDS
TGTTCCAGACCTGACTATTG+TGG 0.616501 2_2:-5408481 Msa0233070:CDS
CATCATTGAATTCACCAAAG+AGG 0.617313 2_2:-5412717 Msa0233070:CDS
AGGGTGGAAGTACACAATGC+AGG 0.619320 2_2:-5408707 Msa0233070:intron
TATCAAGCCTTTCAGCTCAG+GGG 0.622974 2_2:+5408780 None:intergenic
CTTTGGCAGCCATGTCTCGG+TGG 0.624380 2_2:-5407036 Msa0233070:intron
GTCAGTCTCTGAAAGATCAA+GGG 0.624613 2_2:-5408726 Msa0233070:CDS
TTCATGGATGTCTGGCGCCG+AGG 0.627427 2_2:+5406901 None:intergenic
AAGCGCGCTTGATGGATACA+AGG 0.628193 2_2:-5409583 Msa0233070:intron
TCAGTTTAGAATTCCTAAAG+GGG 0.633392 2_2:+5407425 None:intergenic
GTCGAAAAGTGGAGCAACTG+GGG 0.634783 2_2:-5407633 Msa0233070:CDS
CGACCTTTGCTACCAGACGA+TGG 0.635649 2_2:-5409890 Msa0233070:CDS
ATAGCTCAAACGAGAATCAG+AGG 0.637955 2_2:+5406876 None:intergenic
ACACCTTAGTTTCATTCAGG+CGG 0.642954 2_2:+5407609 None:intergenic
AAAGATACCTTAGTATCAAG+GGG 0.645442 2_2:+5412653 None:intergenic
GGCTATCACTATAGCCGCAG+TGG 0.646417 2_2:-5406694 Msa0233070:three_prime_UTR
AGTCTCTGAAAGATCAAGGG+TGG 0.647555 2_2:-5408723 Msa0233070:CDS
AGTACAAGCTTTAACTGGAG+AGG 0.648667 2_2:-5410794 Msa0233070:CDS
GGTCGTACAAGGTAGAGGTA+GGG 0.649766 2_2:-5412819 Msa0233070:CDS
CAAAATACAAAGAGTATACG+GGG 0.651917 2_2:-5410768 Msa0233070:CDS
GTGTTGTGTTGGGAAGAAGA+AGG 0.660426 2_2:+5413191 None:intergenic
GTTTGAGCTATGGCTAAGCA+AGG 0.674108 2_2:-5406864 Msa0233070:exon
AGGAAGTATGTACTTCACAA+AGG 0.676933 2_2:-5410613 Msa0233070:CDS
AATATCTGTTCAAGTGAACG+TGG 0.698747 2_2:+5408757 None:intergenic
TATCACAGCTAAATGATACA+GGG 0.700041 2_2:+5406660 None:intergenic
GGTGTTGAATTGGCACAGAG+CGG 0.715490 2_2:-5409812 Msa0233070:intron
TCAAGCCTTTCAGCTCAGGG+GGG 0.747446 2_2:+5408782 None:intergenic
GGGCATCAATATCACCACTG+CGG 0.799384 2_2:+5406680 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTAAGTTATTTAATGT+TGG - chr2_2:5408443-5408462 Msa0233070:CDS 15.0%
!!! ATATTTATATTGATTTTGAC+TGG - chr2_2:5408718-5408737 Msa0233070:CDS 15.0%
!! ATAATACTTAATCACTAAAA+TGG + chr2_2:5409035-5409054 None:intergenic 15.0%
!! TCAAATGAAACTAATAATAT+AGG + chr2_2:5409218-5409237 None:intergenic 15.0%
!! TACTTCCTTATATTAAAATT+TGG - chr2_2:5409243-5409262 Msa0233070:intron 15.0%
!! ACTTCCTTATATTAAAATTT+GGG - chr2_2:5409244-5409263 Msa0233070:intron 15.0%
!!! TTTTTTTCAAGTTTAACTAT+TGG - chr2_2:5409313-5409332 Msa0233070:intron 15.0%
!!! AAATTCCAAATATTTTTAAC+AGG - chr2_2:5409413-5409432 Msa0233070:intron 15.0%
!!! AATTCCAAATATTTTTAACA+GGG - chr2_2:5409414-5409433 Msa0233070:intron 15.0%
!! ATTTATTACTAGTTGATTAA+TGG + chr2_2:5412171-5412190 None:intergenic 15.0%
!! TCACAAATGTTAAAATTTAA+AGG + chr2_2:5412382-5412401 None:intergenic 15.0%
!!! AATAATAGTTATTTTGGTTA+TGG + chr2_2:5412895-5412914 None:intergenic 15.0%
!!! AGTACAAATAATAGTTATTT+TGG + chr2_2:5412901-5412920 None:intergenic 15.0%
!! AAATTAGTGTTAAATTAGTG+TGG - chr2_2:5406773-5406792 Msa0233070:three_prime_UTR 20.0%
!!! TTTTGATTTGCAGAAAAAAA+TGG - chr2_2:5407134-5407153 Msa0233070:intron 20.0%
!! ATAAGTAGATTACTTATGAT+AGG - chr2_2:5407378-5407397 Msa0233070:intron 20.0%
!!! TTTTTAACAATTGTATGCAT+AGG + chr2_2:5407495-5407514 None:intergenic 20.0%
!! TATTCCATCATTTAAACTTT+AGG - chr2_2:5407608-5407627 Msa0233070:intron 20.0%
!! TTATCCTAAAGTTTAAATGA+TGG + chr2_2:5407615-5407634 None:intergenic 20.0%
!!! TTGATAGTCTTTGTTTTTTT+AGG - chr2_2:5407635-5407654 Msa0233070:CDS 20.0%
!! TAGGTTTATATAGAACATTA+TGG - chr2_2:5407654-5407673 Msa0233070:CDS 20.0%
!! CAAAAATCAACAATTACAAA+AGG + chr2_2:5408220-5408239 None:intergenic 20.0%
!!! TAATTTGTTTTAGTTCATCT+CGG + chr2_2:5408864-5408883 None:intergenic 20.0%
!! TCAGAAAATATAATGAACAA+GGG + chr2_2:5409063-5409082 None:intergenic 20.0%
!!! AAATATTTGGAATTTTTAGC+TGG + chr2_2:5409408-5409427 None:intergenic 20.0%
!!! ATTCCAAATATTTTTAACAG+GGG - chr2_2:5409415-5409434 Msa0233070:intron 20.0%
!!! AACTTTATTTTCTTGTTAGA+TGG - chr2_2:5409507-5409526 Msa0233070:intron 20.0%
!! TGAAATTCTTATAATCGTAA+AGG + chr2_2:5409986-5410005 None:intergenic 20.0%
!!! ATTTGACAAAGTATTTAATC+AGG - chr2_2:5410054-5410073 Msa0233070:intron 20.0%
!!! TACCTATTTTTATGCATAAA+CGG + chr2_2:5410190-5410209 None:intergenic 20.0%
!! AGGTAAAACAGAATATAAAT+TGG - chr2_2:5410205-5410224 Msa0233070:intron 20.0%
!! GAATATAAATTGGAAACTAT+AGG - chr2_2:5410215-5410234 Msa0233070:intron 20.0%
!!! TTCTGATTTTTTCTTTCAAA+AGG - chr2_2:5410485-5410504 Msa0233070:intron 20.0%
!! TAAGAAACAACTAAATTCTT+GGG + chr2_2:5410661-5410680 None:intergenic 20.0%
!! TTAAGAAACAACTAAATTCT+TGG + chr2_2:5410662-5410681 None:intergenic 20.0%
!! TCATTATTCTGATTTACATT+AGG - chr2_2:5411043-5411062 Msa0233070:intron 20.0%
!!! GTTAATTTTACTTGTTAACA+AGG + chr2_2:5411691-5411710 None:intergenic 20.0%
!!! ATGTTTTCATAAAGTAAACA+TGG - chr2_2:5411739-5411758 Msa0233070:intron 20.0%
!! AGTTATAACAATGAAAATCA+AGG + chr2_2:5412123-5412142 None:intergenic 20.0%
!! TCTTAAAAAATAGTGTCAAA+TGG - chr2_2:5412421-5412440 Msa0233070:intron 20.0%
! TTATGTTAGGAATCGATTAT+GGG + chr2_2:5406583-5406602 None:intergenic 25.0%
! ATTATGTTAGGAATCGATTA+TGG + chr2_2:5406584-5406603 None:intergenic 25.0%
!! TTTCTAGATTTTACTCAAGT+AGG - chr2_2:5406708-5406727 Msa0233070:three_prime_UTR 25.0%
! AATGTTTAGATGCAGAAAAA+AGG - chr2_2:5406816-5406835 Msa0233070:three_prime_UTR 25.0%
! ATGTTTAGATGCAGAAAAAA+GGG - chr2_2:5406817-5406836 Msa0233070:three_prime_UTR 25.0%
!! CCTTTACTTATTTGTGTTTT+GGG - chr2_2:5407297-5407316 Msa0233070:intron 25.0%
! TCAATATATGACCAAATGAA+TGG - chr2_2:5407446-5407465 Msa0233070:CDS 25.0%
! GTTCTACTCAAATATAATCA+AGG - chr2_2:5407521-5407540 Msa0233070:intron 25.0%
! ACTCAAATATAATCAAGGAA+TGG - chr2_2:5407526-5407545 Msa0233070:intron 25.0%
! CTCAAATATAATCAAGGAAT+GGG - chr2_2:5407527-5407546 Msa0233070:intron 25.0%
! TGCAAAATGATAAAGTAGTT+TGG + chr2_2:5407587-5407606 None:intergenic 25.0%
!!! TTGTTTGTTGTTGTTAGTTT+TGG - chr2_2:5407719-5407738 Msa0233070:intron 25.0%
! AATATACAAGTCCACAATAT+TGG - chr2_2:5408153-5408172 Msa0233070:intron 25.0%
! ATCAACAATTACAAAAGGAA+GGG + chr2_2:5408215-5408234 None:intergenic 25.0%
! AATCAACAATTACAAAAGGA+AGG + chr2_2:5408216-5408235 None:intergenic 25.0%
!!! TTGTAATTGTTGATTTTTGC+AGG - chr2_2:5408221-5408240 Msa0233070:intron 25.0%
! TTCTTCTTTGAATGATTTCT+TGG - chr2_2:5408594-5408613 Msa0233070:CDS 25.0%
! GAGTACATTGGATAATAATA+TGG - chr2_2:5408633-5408652 Msa0233070:intron 25.0%
!! CTTAACAATGTTTTTCTCAT+TGG - chr2_2:5408754-5408773 Msa0233070:CDS 25.0%
! TACGATAATAAGAAAGCAAT+GGG + chr2_2:5408781-5408800 None:intergenic 25.0%
!! AGCAAAATACAAAGAGTATA+CGG - chr2_2:5408936-5408955 Msa0233070:intron 25.0%
! GTCAGAAAATATAATGAACA+AGG + chr2_2:5409064-5409083 None:intergenic 25.0%
! TCCTTATATTAAAATTTGGG+TGG - chr2_2:5409247-5409266 Msa0233070:intron 25.0%
!!! TCCACCCAAATTTTAATATA+AGG + chr2_2:5409251-5409270 None:intergenic 25.0%
! TTGCTCATAAAATATGATTC+TGG - chr2_2:5409285-5409304 Msa0233070:intron 25.0%
! TTTCCCCTGTTAAAAATATT+TGG + chr2_2:5409421-5409440 None:intergenic 25.0%
! TTTACTTCTCATTAACTGTT+TGG - chr2_2:5409700-5409719 Msa0233070:intron 25.0%
! ATACGTATATCTGTGTATAT+AGG - chr2_2:5409758-5409777 Msa0233070:intron 25.0%
! CTGTGTATATAGGAATTAAA+AGG - chr2_2:5409768-5409787 Msa0233070:intron 25.0%
! CAAATCACTTAAAAATATGC+AGG - chr2_2:5410013-5410032 Msa0233070:intron 25.0%
!!! TTTTTTGATGTGCAATGTTT+TGG - chr2_2:5410377-5410396 Msa0233070:intron 25.0%
!!! ATTTTGGCAAAATCTTTCTA+GGG - chr2_2:5410732-5410751 Msa0233070:CDS 25.0%
!!! CGTTATTATTTGTGTTGTTT+TGG - chr2_2:5410775-5410794 Msa0233070:CDS 25.0%
! AGGTATAGTTTATCTAGTAA+AGG + chr2_2:5410801-5410820 None:intergenic 25.0%
! TTACTAGATAAACTATACCT+TGG - chr2_2:5410801-5410820 Msa0233070:CDS 25.0%
! TGTAAATCAGAATAATGAGA+AGG + chr2_2:5411041-5411060 None:intergenic 25.0%
! TTTACATTAGGTACAAATGT+TGG - chr2_2:5411055-5411074 Msa0233070:intron 25.0%
! TCGTGTAAATATTTATTTGC+AGG - chr2_2:5411093-5411112 Msa0233070:intron 25.0%
! ATAATATTGTACTTCTTTCC+AGG + chr2_2:5411178-5411197 None:intergenic 25.0%
!!! AACATATGTGTTTTTTCCAT+TGG + chr2_2:5411209-5411228 None:intergenic 25.0%
! TAGTTGAAAATGAATGATGT+TGG + chr2_2:5411441-5411460 None:intergenic 25.0%
!! AAGTGAACAATTGTGTTTTT+CGG + chr2_2:5411652-5411671 None:intergenic 25.0%
!!! AATTTTACTTGTTAACAAGG+AGG + chr2_2:5411688-5411707 None:intergenic 25.0%
! AAACCAGATAAAAGTAAATC+AGG + chr2_2:5411987-5412006 None:intergenic 25.0%
! TACTCAGATACATGTTAAAT+GGG + chr2_2:5412517-5412536 None:intergenic 25.0%
! ATACTCAGATACATGTTAAA+TGG + chr2_2:5412518-5412537 None:intergenic 25.0%
!!! TAACTTTCTGTTTTTTCCTT+TGG - chr2_2:5412557-5412576 Msa0233070:CDS 25.0%
!! CTTTTCCTTTGGTATATTAT+TGG - chr2_2:5412580-5412599 Msa0233070:intron 25.0%
! AAAAGCCAATAATATACCAA+AGG + chr2_2:5412588-5412607 None:intergenic 25.0%
!! GAGTATATTTTCTTTTCCTT+TGG - chr2_2:5412614-5412633 Msa0233070:intron 25.0%
! AATGAGTAATCATTAACCAA+AGG + chr2_2:5412633-5412652 None:intergenic 25.0%
!!! TAACTTTCTGTTTTTTCCTT+TGG - chr2_2:5412557-5412576 Msa0233070:CDS 25.0%
!! TTCGTAGAATGGATTATGTT+AGG + chr2_2:5406596-5406615 None:intergenic 30.0%
TGTTTAGATGCAGAAAAAAG+GGG - chr2_2:5406818-5406837 Msa0233070:three_prime_UTR 30.0%
AACAAATCAGACACTAATGA+TGG - chr2_2:5406930-5406949 Msa0233070:CDS 30.0%
ATTGACTGAGAAGATGAAAA+AGG - chr2_2:5407025-5407044 Msa0233070:CDS 30.0%
TTGACTGAGAAGATGAAAAA+GGG - chr2_2:5407026-5407045 Msa0233070:CDS 30.0%
AAAGATACCTTAGTATCAAG+GGG + chr2_2:5407056-5407075 None:intergenic 30.0%
GAAAGATACCTTAGTATCAA+GGG + chr2_2:5407057-5407076 None:intergenic 30.0%
AGAAAGATACCTTAGTATCA+AGG + chr2_2:5407058-5407077 None:intergenic 30.0%
TTTACAAACACCAAAACTCA+GGG + chr2_2:5407097-5407116 None:intergenic 30.0%
TGGTGTTTGTAAAGCTTATA+TGG - chr2_2:5407104-5407123 Msa0233070:intron 30.0%
GGTGTTTGTAAAGCTTATAT+GGG - chr2_2:5407105-5407124 Msa0233070:intron 30.0%
GTGTTTGTAAAGCTTATATG+GGG - chr2_2:5407106-5407125 Msa0233070:intron 30.0%
GACTTAAAAACTGTGTTAGA+TGG - chr2_2:5407181-5407200 Msa0233070:intron 30.0%
AAACTGTGTTAGATGGTTTA+AGG - chr2_2:5407188-5407207 Msa0233070:intron 30.0%
! GCCTTTACTTATTTGTGTTT+TGG - chr2_2:5407296-5407315 Msa0233070:intron 30.0%
CCCAAAACACAAATAAGTAA+AGG + chr2_2:5407300-5407319 None:intergenic 30.0%
AATCAAGCATTCCATTCATT+TGG + chr2_2:5407460-5407479 None:intergenic 30.0%
ATGAGGCTATATCAAATTTG+AGG - chr2_2:5407834-5407853 Msa0233070:CDS 30.0%
TTTAGAAGAGAAGATTGCAA+AGG - chr2_2:5407871-5407890 Msa0233070:intron 30.0%
AAAGGAGGAATCAGATAAAT+TGG - chr2_2:5407889-5407908 Msa0233070:intron 30.0%
AGGAATCAGATAAATTGGTA+TGG - chr2_2:5407894-5407913 Msa0233070:intron 30.0%
AATATCCAATCACAACATTG+TGG + chr2_2:5407927-5407946 None:intergenic 30.0%
!! GACCTTATTTCTTGTGTTTT+TGG - chr2_2:5407973-5407992 Msa0233070:intron 30.0%
AGCCAAAAACACAAGAAATA+AGG + chr2_2:5407978-5407997 None:intergenic 30.0%
GGTATCAAAAACCAATATTG+TGG + chr2_2:5408167-5408186 None:intergenic 30.0%
TCAACAATTACAAAAGGAAG+GGG + chr2_2:5408214-5408233 None:intergenic 30.0%
! GTACAAGTTTTCATTTTCAG+TGG + chr2_2:5408247-5408266 None:intergenic 30.0%
TGATGTGTATTGTCAATAGA+TGG - chr2_2:5408492-5408511 Msa0233070:CDS 30.0%
!! TAAACATTTTGAGTATCAGC+AGG + chr2_2:5408533-5408552 None:intergenic 30.0%
GAAATCGAAAATGAGTACAT+TGG - chr2_2:5408621-5408640 Msa0233070:intron 30.0%
AAATATCAGCAAAATGCACA+AGG + chr2_2:5408704-5408723 None:intergenic 30.0%
CTACGATAATAAGAAAGCAA+TGG + chr2_2:5408782-5408801 None:intergenic 30.0%
CATTGCTTTCTTATTATCGT+AGG - chr2_2:5408780-5408799 Msa0233070:CDS 30.0%
! GCAAAATACAAAGAGTATAC+GGG - chr2_2:5408937-5408956 Msa0233070:intron 30.0%
! CAAAATACAAAGAGTATACG+GGG - chr2_2:5408938-5408957 Msa0233070:intron 30.0%
! TATTTTCTGACTTCACTTGT+AGG - chr2_2:5409073-5409092 Msa0233070:intron 30.0%
!! TACCTTTAACTTCTCCTTTT+CGG + chr2_2:5409153-5409172 None:intergenic 30.0%
GGGGAAATGATTAATATGAA+TGG - chr2_2:5409434-5409453 Msa0233070:intron 30.0%
AAAATTGCACAACACTATTC+TGG - chr2_2:5409651-5409670 Msa0233070:CDS 30.0%
ATGAAACTTATTCAAGACGA+TGG + chr2_2:5409951-5409970 None:intergenic 30.0%
!! CAAATGTAAAAGAGTACTTC+TGG + chr2_2:5410039-5410058 None:intergenic 30.0%
! TGACAAAGTATTTAATCAGG+AGG - chr2_2:5410057-5410076 Msa0233070:CDS 30.0%
! ATTTTTATGCATAAACGGTC+TGG + chr2_2:5410185-5410204 None:intergenic 30.0%
GACCGTTTATGCATAAAAAT+AGG - chr2_2:5410185-5410204 Msa0233070:intron 30.0%
!!! GGCTATTCACAGTTTTTTAA+GGG - chr2_2:5410349-5410368 Msa0233070:intron 30.0%
! CTGATAGATTCTGATTGTTT+TGG - chr2_2:5410427-5410446 Msa0233070:intron 30.0%
! CTAGAAAGATTTTGCCAAAA+TGG + chr2_2:5410733-5410752 None:intergenic 30.0%
!! CATTTTGGCAAAATCTTTCT+AGG - chr2_2:5410731-5410750 Msa0233070:CDS 30.0%
TAGATAAACTATACCTTGGT+TGG - chr2_2:5410805-5410824 Msa0233070:CDS 30.0%
ACAAAGGTTTCATGGTTTAT+TGG - chr2_2:5410831-5410850 Msa0233070:CDS 30.0%
CAAAGGTTTCATGGTTTATT+GGG - chr2_2:5410832-5410851 Msa0233070:CDS 30.0%
AAAGGTTTCATGGTTTATTG+GGG - chr2_2:5410833-5410852 Msa0233070:CDS 30.0%
! TAGGTTTGCATTTTTGCTTA+TGG - chr2_2:5410856-5410875 Msa0233070:CDS 30.0%
! ATTTTTGCTTATGGACAAAC+AGG - chr2_2:5410865-5410884 Msa0233070:CDS 30.0%
AAATATACAACGAGACCATA+AGG - chr2_2:5411128-5411147 Msa0233070:intron 30.0%
AATATACAACGAGACCATAA+GGG - chr2_2:5411129-5411148 Msa0233070:intron 30.0%
AATATTATACACGATGCCAA+TGG - chr2_2:5411190-5411209 Msa0233070:intron 30.0%
! TGCTTTTCTGTGTGAATTTT+TGG - chr2_2:5411411-5411430 Msa0233070:CDS 30.0%
!! ATTGTGTTTTTCGGAAACAA+TGG + chr2_2:5411643-5411662 None:intergenic 30.0%
CGCTGACGTTTAAAAATTAA+AGG + chr2_2:5411813-5411832 None:intergenic 30.0%
!! TCTCCTGATTTACTTTTATC+TGG - chr2_2:5411981-5412000 Msa0233070:intron 30.0%
AAAAATGACATCACTCAAAC+AGG + chr2_2:5412235-5412254 None:intergenic 30.0%
! TCAGTTTAGAATTCCTAAAG+GGG + chr2_2:5412284-5412303 None:intergenic 30.0%
! GTCAGTTTAGAATTCCTAAA+GGG + chr2_2:5412285-5412304 None:intergenic 30.0%
! TGTCAGTTTAGAATTCCTAA+AGG + chr2_2:5412286-5412305 None:intergenic 30.0%
ACTCAGATACATGTTAAATG+GGG + chr2_2:5412516-5412535 None:intergenic 30.0%
AGAGTAAATAGTTGTGAGAT+TGG - chr2_2:5412778-5412797 Msa0233070:CDS 30.0%
TATCACAGCTAAATGATACA+GGG + chr2_2:5413049-5413068 None:intergenic 30.0%
ATATCACAGCTAAATGATAC+AGG + chr2_2:5413050-5413069 None:intergenic 30.0%
! TTAATTCTTGCTACTTCACA+AGG - chr2_2:5413143-5413162 Msa0233070:five_prime_UTR 30.0%
GAACTTAATGCATGCATTAT+TGG + chr2_2:5413237-5413256 None:intergenic 30.0%
TTTGGGAAAATGTTAGGGTT+TGG + chr2_2:5406552-5406571 None:intergenic 35.0%
TGTGAAAGAGAGAGAATGAA+GGG + chr2_2:5406677-5406696 None:intergenic 35.0%
ATGTGAAAGAGAGAGAATGA+AGG + chr2_2:5406678-5406697 None:intergenic 35.0%
GTTTAGATGCAGAAAAAAGG+GGG - chr2_2:5406819-5406838 Msa0233070:three_prime_UTR 35.0%
!! AGTGTCTGATTTGTTGTTGA+GGG + chr2_2:5406925-5406944 None:intergenic 35.0%
!! TAGTGTCTGATTTGTTGTTG+AGG + chr2_2:5406926-5406945 None:intergenic 35.0%
TTGGTGAATTCAATGATGCT+CGG + chr2_2:5406987-5407006 None:intergenic 35.0%
CATCATTGAATTCACCAAAG+AGG - chr2_2:5406989-5407008 Msa0233070:CDS 35.0%
TAAAGCTTCTACTTCCTCTT+TGG + chr2_2:5407006-5407025 None:intergenic 35.0%
TGACTGAGAAGATGAAAAAG+GGG - chr2_2:5407027-5407046 Msa0233070:CDS 35.0%
CTTTACAAACACCAAAACTC+AGG + chr2_2:5407098-5407117 None:intergenic 35.0%
! TGGTTTAAGGTAGTTGAAGA+AGG - chr2_2:5407201-5407220 Msa0233070:intron 35.0%
! GGTTTAAGGTAGTTGAAGAA+GGG - chr2_2:5407202-5407221 Msa0233070:intron 35.0%
! GAGAAAAAATGCGTTGATAC+TGG - chr2_2:5407270-5407289 Msa0233070:intron 35.0%
!! TATTTGTGTTTTGGGCATTG+AGG - chr2_2:5407305-5407324 Msa0233070:intron 35.0%
!!! ATTTGTGTTTTGGGCATTGA+GGG - chr2_2:5407306-5407325 Msa0233070:intron 35.0%
!!! GGGTTTTAAGCATTGTTGTA+TGG - chr2_2:5407326-5407345 Msa0233070:intron 35.0%
! AAGCATTGTTGTATGGCATT+TGG - chr2_2:5407333-5407352 Msa0233070:intron 35.0%
GAAGATAGCAGAATTGAATG+AGG - chr2_2:5407817-5407836 Msa0233070:CDS 35.0%
! TGCAATCTTCTCTTCTAAAG+AGG + chr2_2:5407870-5407889 None:intergenic 35.0%
ATGTTGTGATTGGATATTCC+TGG - chr2_2:5407929-5407948 Msa0233070:intron 35.0%
AAGCAAAAGAAAACATCACC+AGG + chr2_2:5407950-5407969 None:intergenic 35.0%
TATAACATTCCATCACTTCC+TGG + chr2_2:5408002-5408021 None:intergenic 35.0%
GGGAAAATAATTGAGGCAAT+CGG + chr2_2:5408192-5408211 None:intergenic 35.0%
AACAATTACAAAAGGAAGGG+GGG + chr2_2:5408212-5408231 None:intergenic 35.0%
CAACAATTACAAAAGGAAGG+GGG + chr2_2:5408213-5408232 None:intergenic 35.0%
!!! TTTGTTTTAGTTCATCTCGG+AGG + chr2_2:5408861-5408880 None:intergenic 35.0%
! AGGAAGTATGTACTTCACAA+AGG - chr2_2:5409093-5409112 Msa0233070:intron 35.0%
TGTTTCCGAAAAGGACAAAT+CGG + chr2_2:5409533-5409552 None:intergenic 35.0%
GAAGACCAGAAAAGAACTAT+AGG - chr2_2:5409565-5409584 Msa0233070:intron 35.0%
! GTTGACCTATAGTTCTTTTC+TGG + chr2_2:5409573-5409592 None:intergenic 35.0%
AAAGAGCTCCAAGTAATTGA+AGG - chr2_2:5409613-5409632 Msa0233070:CDS 35.0%
ATGTCTCTCCTTCAATTACT+TGG + chr2_2:5409624-5409643 None:intergenic 35.0%
CACAACACTATTCTGGTAAA+TGG - chr2_2:5409658-5409677 Msa0233070:CDS 35.0%
GAATGTTACAACTTGCAAGA+TGG - chr2_2:5410237-5410256 Msa0233070:intron 35.0%
GATGGAAAAACACTTACTCT+TGG - chr2_2:5410255-5410274 Msa0233070:intron 35.0%
AAAACACTTACTCTTGGCTT+TGG - chr2_2:5410261-5410280 Msa0233070:intron 35.0%
AAAACTGTGAATAGCCGAAA+TGG + chr2_2:5410345-5410364 None:intergenic 35.0%
!!! CGGCTATTCACAGTTTTTTA+AGG - chr2_2:5410348-5410367 Msa0233070:intron 35.0%
! CAAAGTCTGGCACATTATTT+TGG - chr2_2:5410556-5410575 Msa0233070:intron 35.0%
!!! GGAAATGGATTATGCCATTT+TGG - chr2_2:5410716-5410735 Msa0233070:intron 35.0%
GGAAAAACCTATACGATGAT+TGG - chr2_2:5410892-5410911 Msa0233070:CDS 35.0%
AATATCTGTTCAAGTGAACG+TGG + chr2_2:5410952-5410971 None:intergenic 35.0%
ACATTAGGTACAAATGTTGG+TGG - chr2_2:5411058-5411077 Msa0233070:intron 35.0%
TGGTGATAACAAATCCCTTA+TGG + chr2_2:5411146-5411165 None:intergenic 35.0%
TTATCACCAACAGAAAATCC+TGG - chr2_2:5411157-5411176 Msa0233070:intron 35.0%
! TTCTTTCCAGGATTTTCTGT+TGG + chr2_2:5411166-5411185 None:intergenic 35.0%
!!! TTGTGCAGCTTGTTTTAGAA+GGG + chr2_2:5411278-5411297 None:intergenic 35.0%
!!! TTTGTGCAGCTTGTTTTAGA+AGG + chr2_2:5411279-5411298 None:intergenic 35.0%
ATTGTGTTGCGAAGTTATGT+TGG - chr2_2:5411342-5411361 Msa0233070:CDS 35.0%
TTGTGTTGCGAAGTTATGTT+GGG - chr2_2:5411343-5411362 Msa0233070:CDS 35.0%
!! ATTGTAGCTTTCAAGTTTCC+TGG - chr2_2:5411468-5411487 Msa0233070:intron 35.0%
TGAAACGATTATACAGAACC+AGG + chr2_2:5411489-5411508 None:intergenic 35.0%
CAATGTGATTGTGTTCTTTC+TGG - chr2_2:5411787-5411806 Msa0233070:intron 35.0%
CTGACCTGGAAAAATGTAAA+GGG + chr2_2:5411836-5411855 None:intergenic 35.0%
ACTGACCTGGAAAAATGTAA+AGG + chr2_2:5411837-5411856 None:intergenic 35.0%
! TTACATTTTTCCAGGTCAGT+AGG - chr2_2:5411837-5411856 Msa0233070:CDS 35.0%
TTTGTAGAACACTGAACAAC+AGG - chr2_2:5412004-5412023 Msa0233070:intron 35.0%
ATATTCAAGCTTAGCAAACC+TGG + chr2_2:5412317-5412336 None:intergenic 35.0%
TTTACACATGAGAGAACATG+AGG - chr2_2:5412485-5412504 Msa0233070:CDS 35.0%
TTACACATGAGAGAACATGA+GGG - chr2_2:5412486-5412505 Msa0233070:CDS 35.0%
!!! TTTTCCTTTGGCTTTTCCTT+TGG - chr2_2:5412569-5412588 Msa0233070:intron 35.0%
TATACCAAAGGAAAAGCCAA+AGG + chr2_2:5412576-5412595 None:intergenic 35.0%
TTAGAGAATTGAGCTTGTAG+TGG - chr2_2:5412986-5413005 Msa0233070:intron 35.0%
CAGTTGTTAACAACATGCTT+TGG - chr2_2:5413186-5413205 Msa0233070:five_prime_UTR 35.0%
GTGTTGTGTTGTGTTGTGTT+GGG + chr2_2:5406528-5406547 None:intergenic 40.0%
AGTGTTGTGTTGTGTTGTGT+TGG + chr2_2:5406529-5406548 None:intergenic 40.0%
TCGCGTTTGGGAAAATGTTA+GGG + chr2_2:5406557-5406576 None:intergenic 40.0%
ATCGCGTTTGGGAAAATGTT+AGG + chr2_2:5406558-5406577 None:intergenic 40.0%
GATTATGGGAAATCGCGTTT+GGG + chr2_2:5406569-5406588 None:intergenic 40.0%
! ACATGAAGTGCTTCGTAGAA+TGG + chr2_2:5406607-5406626 None:intergenic 40.0%
GTGAAAGAGAGAGAATGAAG+GGG + chr2_2:5406676-5406695 None:intergenic 40.0%
CTGAAGAAAACAAGCGTAGA+AGG - chr2_2:5406847-5406866 Msa0233070:three_prime_UTR 40.0%
GAAAACAAGCGTAGAAGGAT+TGG - chr2_2:5406852-5406871 Msa0233070:exon 40.0%
!! AAGGATTGGTGGTGAAAGAA+TGG - chr2_2:5406866-5406885 Msa0233070:exon 40.0%
! TTGTTGTTGAGGGAACCTAA+TGG + chr2_2:5406915-5406934 None:intergenic 40.0%
! TTTACTGTCTCCCTGAGTTT+TGG - chr2_2:5407084-5407103 Msa0233070:intron 40.0%
GCAGAAAAAAATGGAGCAGA+TGG - chr2_2:5407143-5407162 Msa0233070:intron 40.0%
GAAAAAAATGGAGCAGATGG+TGG - chr2_2:5407146-5407165 Msa0233070:intron 40.0%
AGAAGAGAAGATTGCAAAGG+AGG - chr2_2:5407874-5407893 Msa0233070:intron 40.0%
GTTTGCCACAATGTTGTGAT+TGG - chr2_2:5407919-5407938 Msa0233070:intron 40.0%
!!! TTCTTGTGTTTTTGGCTACC+AGG - chr2_2:5407981-5408000 Msa0233070:intron 40.0%
AAATAATTGAGGCAATCGGC+TGG + chr2_2:5408188-5408207 None:intergenic 40.0%
GAGAACCTTAGCAATGTTAG+AGG - chr2_2:5408384-5408403 Msa0233070:intron 40.0%
CAATGTTAGAGGCCACAATA+AGG - chr2_2:5408395-5408414 Msa0233070:intron 40.0%
ATTACGTGAAGTTCCTGTTG+TGG - chr2_2:5408555-5408574 Msa0233070:CDS 40.0%
AATTCCAACTTGTCCACAAC+AGG + chr2_2:5408571-5408590 None:intergenic 40.0%
CTTATTATCGTAGGCTTCAC+AGG - chr2_2:5408789-5408808 Msa0233070:CDS 40.0%
AAGCTTGTACTTGTCCCAAT+TGG + chr2_2:5408903-5408922 None:intergenic 40.0%
! GGACAAGTACAAGCTTTAAC+TGG - chr2_2:5408907-5408926 Msa0233070:intron 40.0%
! AGTACAAGCTTTAACTGGAG+AGG - chr2_2:5408912-5408931 Msa0233070:intron 40.0%
GGGAAATCAAGTGAACAGTT+GGG - chr2_2:5408958-5408977 Msa0233070:intron 40.0%
TGAACAGTTGGGTACATTGA+CGG - chr2_2:5408969-5408988 Msa0233070:intron 40.0%
TGCCGAAAAGGAGAAGTTAA+AGG - chr2_2:5409148-5409167 Msa0233070:intron 40.0%
ACCTTATTACCAACTGTGCT+TGG - chr2_2:5409336-5409355 Msa0233070:intron 40.0%
!! ACCAAGCACAGTTGGTAATA+AGG + chr2_2:5409340-5409359 None:intergenic 40.0%
! GTCCTTTTCGGAAACACAAA+CGG - chr2_2:5409537-5409556 Msa0233070:intron 40.0%
! CAAGAGCTTCTGTTGATGAA+GGG + chr2_2:5409869-5409888 None:intergenic 40.0%
TCAAAGCTGTGTAGCCATTT+CGG - chr2_2:5410328-5410347 Msa0233070:intron 40.0%
AATCTATCAGCAAGCAACAG+AGG + chr2_2:5410417-5410436 None:intergenic 40.0%
!! GTCCTCTAAAATGCAAAGTC+TGG - chr2_2:5410543-5410562 Msa0233070:intron 40.0%
! TGCCAGACTTTGCATTTTAG+AGG + chr2_2:5410548-5410567 None:intergenic 40.0%
!!! GGCACATTATTTTGGTCACA+TGG - chr2_2:5410564-5410583 Msa0233070:CDS 40.0%
! TGGTCACATGGAATTTTGTC+TGG - chr2_2:5410576-5410595 Msa0233070:CDS 40.0%
AGTATCTTGTGCTTGATACC+TGG - chr2_2:5410611-5410630 Msa0233070:CDS 40.0%
GTATCTTGTGCTTGATACCT+GGG - chr2_2:5410612-5410631 Msa0233070:CDS 40.0%
GTTTCATGGTTTATTGGGGT+AGG - chr2_2:5410837-5410856 Msa0233070:CDS 40.0%
AAACCTATACGATGATTGGC+AGG - chr2_2:5410896-5410915 Msa0233070:CDS 40.0%
CTTTCAGAGACTGACTAACA+AGG + chr2_2:5410975-5410994 None:intergenic 40.0%
! AGTCAGTCTCTGAAAGATCA+AGG - chr2_2:5410979-5410998 Msa0233070:intron 40.0%
! GTCAGTCTCTGAAAGATCAA+GGG - chr2_2:5410980-5410999 Msa0233070:intron 40.0%
CTGACTATTGTGGATGTTTG+CGG - chr2_2:5411235-5411254 Msa0233070:intron 40.0%
TAAAACAAGCTGCACAAAGC+AGG - chr2_2:5411281-5411300 Msa0233070:intron 40.0%
TGTGTTGCGAAGTTATGTTG+GGG - chr2_2:5411344-5411363 Msa0233070:CDS 40.0%
! ACTGTGGCACATATTTTGTC+TGG + chr2_2:5411378-5411397 None:intergenic 40.0%
GTCTTTACTCTGCGAATAAG+TGG - chr2_2:5411900-5411919 Msa0233070:intron 40.0%
! GCGAATAAGTGGTGTTAATG+AGG - chr2_2:5411911-5411930 Msa0233070:intron 40.0%
AACACTGAACAACAGGTTCA+AGG - chr2_2:5412011-5412030 Msa0233070:intron 40.0%
CTAAACCTGATAGATCTTGC+TGG - chr2_2:5412038-5412057 Msa0233070:intron 40.0%
TAGATCTTGCTGGAAGTGAA+AGG - chr2_2:5412048-5412067 Msa0233070:intron 40.0%
ACACCTTAGTTTCATTCAGG+CGG + chr2_2:5412100-5412119 None:intergenic 40.0%
AGGACACCTTAGTTTCATTC+AGG + chr2_2:5412103-5412122 None:intergenic 40.0%
GTTTGCCATATATGTCTGTC+AGG - chr2_2:5412191-5412210 Msa0233070:intron 40.0%
TATCGCCTGACAGACATATA+TGG + chr2_2:5412199-5412218 None:intergenic 40.0%
!!! GAGTGATGTCATTTTTGCCT+TGG - chr2_2:5412239-5412258 Msa0233070:intron 40.0%
! TTTTGCCTTGGCAAAGAAAG+AGG - chr2_2:5412251-5412270 Msa0233070:intron 40.0%
ATGATCCTCTTTCTTTGCCA+AGG + chr2_2:5412259-5412278 None:intergenic 40.0%
TACACATGAGAGAACATGAG+GGG - chr2_2:5412487-5412506 Msa0233070:CDS 40.0%
CTCACAACTATTTACTCTCG+CGG + chr2_2:5412776-5412795 None:intergenic 40.0%
GTTGTGAGATTGGTATTCCT+CGG - chr2_2:5412788-5412807 Msa0233070:CDS 40.0%
ATAGCTCAAACGAGAATCAG+AGG + chr2_2:5412833-5412852 None:intergenic 40.0%
TCTGATTCTCGTTTGAGCTA+TGG - chr2_2:5412832-5412851 Msa0233070:CDS 40.0%
AGCAAGGTCTGCTTACAAAA+TGG - chr2_2:5412858-5412877 Msa0233070:CDS 40.0%
! GCGTTGTGTTGTTCTAAGTA+TGG - chr2_2:5412942-5412961 Msa0233070:intron 40.0%
! TGCTACTTCACAAGGTTGAT+TGG - chr2_2:5413151-5413170 Msa0233070:five_prime_UTR 40.0%
! ACTTCACAAGGTTGATTGGA+TGG - chr2_2:5413155-5413174 Msa0233070:five_prime_UTR 40.0%
GTGTTGTGTTGGGAAGAAGA+AGG + chr2_2:5406518-5406537 None:intergenic 45.0%
CGATTATGGGAAATCGCGTT+TGG + chr2_2:5406570-5406589 None:intergenic 45.0%
TGTCTTCCCGGAATCAGAAT+CGG - chr2_2:5406624-5406643 Msa0233070:three_prime_UTR 45.0%
AATGAAGGGGATTCGTACGT+TGG + chr2_2:5406663-5406682 None:intergenic 45.0%
TAGATGCAGAAAAAAGGGGG+TGG - chr2_2:5406822-5406841 Msa0233070:three_prime_UTR 45.0%
AACAAGCGTAGAAGGATTGG+TGG - chr2_2:5406855-5406874 Msa0233070:exon 45.0%
GGTGAAAGAATGGTCGTACA+AGG - chr2_2:5406876-5406895 Msa0233070:CDS 45.0%
AGAATGGTCGTACAAGGTAG+AGG - chr2_2:5406882-5406901 Msa0233070:CDS 45.0%
! TCAGACACTAATGATGGTGC+CGG - chr2_2:5406936-5406955 Msa0233070:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_2:5407701-5407720 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_2:5407702-5407721 None:intergenic 45.0%
! ACAAGCCTTATCCCACTAAG+TGG + chr2_2:5407703-5407722 None:intergenic 45.0%
!! TTTTGGCTACCAGGAAGTGA+TGG - chr2_2:5407990-5408009 Msa0233070:intron 45.0%
CATCTGCTCAGCTTCATTTC+TGG + chr2_2:5408040-5408059 None:intergenic 45.0%
GGAAGGGGGGAAAATAATTG+AGG + chr2_2:5408199-5408218 None:intergenic 45.0%
GCAGTACAATAGTAGCCTTC+AGG - chr2_2:5408299-5408318 Msa0233070:intron 45.0%
AAATCTTGACGCAGCTAGTG+CGG - chr2_2:5408323-5408342 Msa0233070:intron 45.0%
TGTGGCCTCTAACATTGCTA+AGG + chr2_2:5408392-5408411 None:intergenic 45.0%
! GCTCTTGCAATGCCTTATTG+TGG + chr2_2:5408410-5408429 None:intergenic 45.0%
!! TAAGGCATTGCAAGAGCAGT+TGG - chr2_2:5408413-5408432 Msa0233070:intron 45.0%
AGTTCCTGTTGTGGACAAGT+TGG - chr2_2:5408564-5408583 Msa0233070:CDS 45.0%
TTCACAGGAAGAGGCTACAA+AGG - chr2_2:5408804-5408823 Msa0233070:CDS 45.0%
GGGGAAATCAAGTGAACAGT+TGG - chr2_2:5408957-5408976 Msa0233070:intron 45.0%
GGCTAAAACAAATGCTCTCG+AGG - chr2_2:5408990-5409009 Msa0233070:intron 45.0%
!!! GATGGCCGATTTGTCCTTTT+CGG - chr2_2:5409525-5409544 Msa0233070:intron 45.0%
CACCGTTTGTGTTTCCGAAA+AGG + chr2_2:5409542-5409561 None:intergenic 45.0%
! CCAAGAGCTTCTGTTGATGA+AGG + chr2_2:5409870-5409889 None:intergenic 45.0%
CCTTCATCAACAGAAGCTCT+TGG - chr2_2:5409867-5409886 Msa0233070:CDS 45.0%
!! TCTTGGTCGAGGTGTTGAAT+TGG - chr2_2:5409884-5409903 Msa0233070:CDS 45.0%
GGAGACTTGCACAATTCTGT+TGG - chr2_2:5410282-5410301 Msa0233070:intron 45.0%
ATCAGCAAGCAACAGAGGAA+TGG + chr2_2:5410412-5410431 None:intergenic 45.0%
! TTTTCCTTCACGAAGCAGCA+CGG - chr2_2:5410695-5410714 Msa0233070:intron 45.0%
! ATACCTTGGTTGGCTGACAA+AGG - chr2_2:5410815-5410834 Msa0233070:CDS 45.0%
AAACCTTTGTCAGCCAACCA+AGG + chr2_2:5410821-5410840 None:intergenic 45.0%
GTTGGCTGACAAAGGTTTCA+TGG - chr2_2:5410823-5410842 Msa0233070:CDS 45.0%
GCTTATGGACAAACAGGTTC+TGG - chr2_2:5410871-5410890 Msa0233070:CDS 45.0%
TATCAAGCCTTTCAGCTCAG+GGG + chr2_2:5410929-5410948 None:intergenic 45.0%
GTATCAAGCCTTTCAGCTCA+GGG + chr2_2:5410930-5410949 None:intergenic 45.0%
! AGTCTCTGAAAGATCAAGGG+TGG - chr2_2:5410983-5411002 Msa0233070:intron 45.0%
TGTTCCAGACCTGACTATTG+TGG - chr2_2:5411225-5411244 Msa0233070:intron 45.0%
ACATCCACAATAGTCAGGTC+TGG + chr2_2:5411232-5411251 None:intergenic 45.0%
CGCAAACATCCACAATAGTC+AGG + chr2_2:5411237-5411256 None:intergenic 45.0%
!!! TGCAGCTTGTTTTAGAAGGG+CGG + chr2_2:5411275-5411294 None:intergenic 45.0%
GCAGATGCATTATTGCACTG+TGG + chr2_2:5411394-5411413 None:intergenic 45.0%
! AGCGCCCTTTACATTTTTCC+AGG - chr2_2:5411829-5411848 Msa0233070:CDS 45.0%
CACTTCCAGCAAGATCTATC+AGG + chr2_2:5412046-5412065 None:intergenic 45.0%
AGTGAAAGGCTGTCGAAAAG+TGG - chr2_2:5412062-5412081 Msa0233070:intron 45.0%
TGTCGAAAAGTGGAGCAACT+GGG - chr2_2:5412072-5412091 Msa0233070:intron 45.0%
AAGAGGATCATGTCCCCTTT+AGG - chr2_2:5412268-5412287 Msa0233070:intron 45.0%
TAAACTGACAACCCTTCTCC+AGG - chr2_2:5412296-5412315 Msa0233070:intron 45.0%
AGCTTAGCAAACCTGGAGAA+GGG + chr2_2:5412310-5412329 None:intergenic 45.0%
AAGCTTAGCAAACCTGGAGA+AGG + chr2_2:5412311-5412330 None:intergenic 45.0%
TTGTGAGTGAAGAGAACTCG+AGG - chr2_2:5412396-5412415 Msa0233070:intron 45.0%
TTAGAATCTCCACCGAGACA+TGG + chr2_2:5412682-5412701 None:intergenic 45.0%
GTTTGAGCTATGGCTAAGCA+AGG - chr2_2:5412842-5412861 Msa0233070:CDS 45.0%
GAATTGAGCTTGTAGTGGCT+TGG - chr2_2:5412991-5413010 Msa0233070:intron 45.0%
! CGAAGCACTTCATGTCTTCC+CGG - chr2_2:5406612-5406631 Msa0233070:three_prime_UTR 50.0%
GTCTTCCCGGAATCAGAATC+GGG - chr2_2:5406625-5406644 Msa0233070:three_prime_UTR 50.0%
! TTGGTGCCCGATTCTGATTC+CGG + chr2_2:5406634-5406653 None:intergenic 50.0%
AAGGGGATTCGTACGTTGGA+GGG + chr2_2:5406659-5406678 None:intergenic 50.0%
TGGTCGTACAAGGTAGAGGT+AGG - chr2_2:5406886-5406905 Msa0233070:CDS 50.0%
GGTCGTACAAGGTAGAGGTA+GGG - chr2_2:5406887-5406906 Msa0233070:CDS 50.0%
GGGGAATCCCCTTGATACTA+AGG - chr2_2:5407046-5407065 Msa0233070:intron 50.0%
! ACTAAGTGGGGTTGGCAAGA+TGG + chr2_2:5407689-5407708 None:intergenic 50.0%
ATCTTGCCAACCCCACTTAG+TGG - chr2_2:5407688-5407707 Msa0233070:CDS 50.0%
TCTTGCCAACCCCACTTAGT+GGG - chr2_2:5407689-5407708 Msa0233070:CDS 50.0%
CTTATCCCACTAAGTGGGGT+TGG + chr2_2:5407697-5407716 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG - chr2_2:5407695-5407714 Msa0233070:CDS 50.0%
CTGCGTCAAGATTTGCCTGA+AGG + chr2_2:5408317-5408336 None:intergenic 50.0%
TAGTGCGGCACAAAAACGAC+TGG - chr2_2:5408338-5408357 Msa0233070:intron 50.0%
ATCGTAGGCTTCACAGGAAG+AGG - chr2_2:5408795-5408814 Msa0233070:CDS 50.0%
CTTGTCCCAATTGGCGATCA+CGG + chr2_2:5408894-5408913 None:intergenic 50.0%
GCAGCAGTTGAATGCCGAAA+AGG - chr2_2:5409136-5409155 Msa0233070:intron 50.0%
CAGCAAAGACCAAGCACAGT+TGG + chr2_2:5409348-5409367 None:intergenic 50.0%
! CAACTGTGCTTGGTCTTTGC+TGG - chr2_2:5409346-5409365 Msa0233070:intron 50.0%
AGGTCAACTACGAGAGAGAC+TGG - chr2_2:5409585-5409604 Msa0233070:CDS 50.0%
CTGGTAGCAAAGGTCGAACA+CGG + chr2_2:5409812-5409831 None:intergenic 50.0%
GTAACTACCATGTCTGCTGC+AGG + chr2_2:5409843-5409862 None:intergenic 50.0%
TCAACAGAAGCTCTTGGTCG+AGG - chr2_2:5409873-5409892 Msa0233070:CDS 50.0%
! GGTGTTGAATTGGCACAGAG+CGG - chr2_2:5409894-5409913 Msa0233070:CDS 50.0%
AAGACGATGGCAAGAGAGAG+AGG + chr2_2:5409938-5409957 None:intergenic 50.0%
TAATCAGGAGGCTTCACAGC+AGG - chr2_2:5410069-5410088 Msa0233070:CDS 50.0%
CTAGTACAAAGCGCGCTTGA+TGG - chr2_2:5410115-5410134 Msa0233070:CDS 50.0%
! AAGCGCGCTTGATGGATACA+AGG - chr2_2:5410123-5410142 Msa0233070:CDS 50.0%
ACCTGGGCGTCTGTTGTTAA+TGG - chr2_2:5410628-5410647 Msa0233070:intron 50.0%
TCCATTAACAACAGACGCCC+AGG + chr2_2:5410632-5410651 None:intergenic 50.0%
!! ATTTCCGTGCTGCTTCGTGA+AGG + chr2_2:5410702-5410721 None:intergenic 50.0%
TTCACGAAGCAGCACGGAAA+TGG - chr2_2:5410701-5410720 Msa0233070:intron 50.0%
AGGCCTGCCAATCATCGTAT+AGG + chr2_2:5410902-5410921 None:intergenic 50.0%
TATACGATGATTGGCAGGCC+TGG - chr2_2:5410901-5410920 Msa0233070:CDS 50.0%
ATCAAGCCTTTCAGCTCAGG+GGG + chr2_2:5410928-5410947 None:intergenic 50.0%
GGTATCAAGCCTTTCAGCTC+AGG + chr2_2:5410931-5410950 None:intergenic 50.0%
! AGGGTGGAAGTACACAATGC+AGG - chr2_2:5410999-5411018 Msa0233070:intron 50.0%
CTGTGTTCTTCCTACTGACC+TGG + chr2_2:5411850-5411869 None:intergenic 50.0%
CTGTCGAAAAGTGGAGCAAC+TGG - chr2_2:5412071-5412090 Msa0233070:intron 50.0%
GTCGAAAAGTGGAGCAACTG+GGG - chr2_2:5412073-5412092 Msa0233070:intron 50.0%
GGACCGCCTGAATGAAACTA+AGG - chr2_2:5412094-5412113 Msa0233070:intron 50.0%
TTCCTTTGGCAGCCATGTCT+CGG - chr2_2:5412667-5412686 Msa0233070:CDS 50.0%
TCTCCAGTCGAAGATGGATC+GGG + chr2_2:5412730-5412749 None:intergenic 50.0%
CTCTCCAGTCGAAGATGGAT+CGG + chr2_2:5412731-5412750 None:intergenic 50.0%
AGTGACTCTCCAGTCGAAGA+TGG + chr2_2:5412736-5412755 None:intergenic 50.0%
ACGAGAATCAGAGGCCTTCA+TGG + chr2_2:5412824-5412843 None:intergenic 50.0%
GGGCATCAATATCACCACTG+CGG + chr2_2:5413029-5413048 None:intergenic 50.0%
TGGTGCCCGATTCTGATTCC+GGG + chr2_2:5406633-5406652 None:intergenic 55.0%
ATTCGTACGTTGGAGGGGCT+TGG + chr2_2:5406653-5406672 None:intergenic 55.0%
AGGGGATTCGTACGTTGGAG+GGG + chr2_2:5406658-5406677 None:intergenic 55.0%
GAAGGGGATTCGTACGTTGG+AGG + chr2_2:5406660-5406679 None:intergenic 55.0%
GGTAGAGGTAGGGCTCCATT+AGG - chr2_2:5406897-5406916 Msa0233070:CDS 55.0%
!! ACTAATGATGGTGCCGGTGC+CGG - chr2_2:5406942-5406961 Msa0233070:CDS 55.0%
TTGCGAGATCAGCTGCTGAG+CGG - chr2_2:5408097-5408116 Msa0233070:intron 55.0%
AGACGACCGTGATCGCCAAT+TGG - chr2_2:5408885-5408904 Msa0233070:intron 55.0%
GACGACCGTGATCGCCAATT+GGG - chr2_2:5408886-5408905 Msa0233070:intron 55.0%
GTCGAACACGGCAGAACACA+CGG + chr2_2:5409800-5409819 None:intergenic 55.0%
CGACCTTTGCTACCAGACGA+TGG - chr2_2:5409816-5409835 Msa0233070:CDS 55.0%
GGACCATCGTCTGGTAGCAA+AGG + chr2_2:5409822-5409841 None:intergenic 55.0%
TCAAGCCTTTCAGCTCAGGG+GGG + chr2_2:5410927-5410946 None:intergenic 55.0%
TCACCCGATCCATCTTCGAC+TGG - chr2_2:5412724-5412743 Msa0233070:CDS 55.0%
CAGAGGCCTTCATGGATGTC+TGG + chr2_2:5412816-5412835 None:intergenic 55.0%
GGCTATCACTATAGCCGCAG+TGG - chr2_2:5413012-5413031 Msa0233070:intron 55.0%
CTCAGATCCCTCGGTTGCAC+CGG + chr2_2:5406964-5406983 None:intergenic 60.0%
GATGCTCGGCTCAGATCCCT+CGG + chr2_2:5406973-5406992 None:intergenic 60.0%
TCTGCTGCAGGACCATCGTC+TGG + chr2_2:5409831-5409850 None:intergenic 60.0%
CGATGGTCCTGCAGCAGACA+TGG - chr2_2:5409833-5409852 Msa0233070:CDS 60.0%
CACCGAGACATGGCTGCCAA+AGG + chr2_2:5412672-5412691 None:intergenic 60.0%
CTTTGGCAGCCATGTCTCGG+TGG - chr2_2:5412670-5412689 Msa0233070:CDS 60.0%
TTCATGGATGTCTGGCGCCG+AGG + chr2_2:5412808-5412827 None:intergenic 60.0%
TCGGCGCCAGACATCCATGA+AGG - chr2_2:5412807-5412826 Msa0233070:CDS 60.0%
GAGATCAGCTGCTGAGCGGC+AGG - chr2_2:5408101-5408120 Msa0233070:intron 65.0%
! TCCCTCGGTTGCACCGGCAC+CGG + chr2_2:5406958-5406977 None:intergenic 70.0%
CCTTTCAGCTCAGGGGGGCC+AGG + chr2_2:5410922-5410941 None:intergenic 70.0%
CCTGGCCCCCCTGAGCTGAA+AGG - chr2_2:5410919-5410938 Msa0233070:intron 70.0%
!! TGCCGGTGCCGGTGCAACCG+AGG - chr2_2:5406953-5406972 Msa0233070:CDS 75.0%
!! GCCGGTGCCGGTGCAACCGA+GGG - chr2_2:5406954-5406973 Msa0233070:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5406462 5413266 5406462 ID=Msa0233070;Name=Msa0233070
chr2_2 mRNA 5406462 5413266 5406462 ID=Msa0233070-mRNA-1;Parent=Msa0233070;Name=Msa0233070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=161|0.93|0.94|1|0.93|0.94|17|408|779
chr2_2 exon 5406462 5407049 5406462 ID=Msa0233070-mRNA-1:exon:2374;Parent=Msa0233070-mRNA-1
chr2_2 exon 5407411 5407515 5407411 ID=Msa0233070-mRNA-1:exon:2373;Parent=Msa0233070-mRNA-1
chr2_2 exon 5407613 5407717 5407613 ID=Msa0233070-mRNA-1:exon:2372;Parent=Msa0233070-mRNA-1
chr2_2 exon 5407796 5407877 5407796 ID=Msa0233070-mRNA-1:exon:2371;Parent=Msa0233070-mRNA-1
chr2_2 exon 5408426 5408613 5408426 ID=Msa0233070-mRNA-1:exon:2370;Parent=Msa0233070-mRNA-1
chr2_2 exon 5408708 5408869 5408708 ID=Msa0233070-mRNA-1:exon:2369;Parent=Msa0233070-mRNA-1
chr2_2 exon 5409584 5409693 5409584 ID=Msa0233070-mRNA-1:exon:2368;Parent=Msa0233070-mRNA-1
chr2_2 exon 5409813 5409948 5409813 ID=Msa0233070-mRNA-1:exon:2367;Parent=Msa0233070-mRNA-1
chr2_2 exon 5410056 5410202 5410056 ID=Msa0233070-mRNA-1:exon:2366;Parent=Msa0233070-mRNA-1
chr2_2 exon 5410559 5410633 5410559 ID=Msa0233070-mRNA-1:exon:2365;Parent=Msa0233070-mRNA-1
chr2_2 exon 5410717 5410926 5410717 ID=Msa0233070-mRNA-1:exon:2364;Parent=Msa0233070-mRNA-1
chr2_2 exon 5411282 5411485 5411282 ID=Msa0233070-mRNA-1:exon:2363;Parent=Msa0233070-mRNA-1
chr2_2 exon 5411606 5411725 5411606 ID=Msa0233070-mRNA-1:exon:2362;Parent=Msa0233070-mRNA-1
chr2_2 exon 5411818 5411903 5411818 ID=Msa0233070-mRNA-1:exon:2361;Parent=Msa0233070-mRNA-1
chr2_2 exon 5412437 5412581 5412437 ID=Msa0233070-mRNA-1:exon:2360;Parent=Msa0233070-mRNA-1
chr2_2 exon 5412661 5412903 5412661 ID=Msa0233070-mRNA-1:exon:2359;Parent=Msa0233070-mRNA-1
chr2_2 exon 5413064 5413266 5413064 ID=Msa0233070-mRNA-1:exon:2358;Parent=Msa0233070-mRNA-1
chr2_2 five_prime_UTR 5413106 5413266 5413106 ID=Msa0233070-mRNA-1:five_prime_utr;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5413064 5413105 5413064 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5412661 5412903 5412661 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5412437 5412581 5412437 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5411818 5411903 5411818 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5411606 5411725 5411606 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5411282 5411485 5411282 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5410717 5410926 5410717 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5410559 5410633 5410559 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5410056 5410202 5410056 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5409813 5409948 5409813 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5409584 5409693 5409584 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5408708 5408869 5408708 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5408426 5408613 5408426 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5407796 5407877 5407796 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5407613 5407717 5407613 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5407411 5407515 5407411 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 CDS 5406870 5407049 5406870 ID=Msa0233070-mRNA-1:cds;Parent=Msa0233070-mRNA-1
chr2_2 three_prime_UTR 5406462 5406869 5406462 ID=Msa0233070-mRNA-1:three_prime_utr;Parent=Msa0233070-mRNA-1
Gene Sequence

>Msa0233070

ATGTCTTCCCGGAATCAGAATCGGGCACCAAGCCCCTCCAACATGCAGAAAAAAGGGGGTGGTGCTGAAGAAAACAAGCGTAGAAGGATTGGTGGTGAAAGAATGGTCGTACAAGGTAGAGGTAGGGCTCCATTAGGTTCCCTCAACAACAAATCAGACACTAATGATGGTGCCGGTGCCGGTGCAACCGAGGGATCTGAGCCGAGCATCATTGAATTCACCAAAGAGGAAGTAGAAGCTTTATTGACTGAGAAGATGAAAAAGGGGAATCCCCTTGATACTAAGAAAAAAATGGAGCAGATGGTGGATCTTATCAAGCGACTTAAAAACTGTGTTAGATGGTTTAAGGTAGTTGAAGAAGGGTATATTAAAGAAAAAGAAAAGCTTCAGACAGATCTAGAATCTGCTGAGAAAAAATGCGTTGATACTGCAGAATTGAATGAGGCTATATCAAATTTGAGGATGACGATTTCCTCTTTAGAAGAGAAGATTGCAAAGGAGGAATCAGATAAATTGGAAGTGATGGAATGTTATAGAAAAGAAAAAGAAGCCAGAAATGAAGCTGAGCAGATGCAAGTTTCTCTTTCAACTGAACTTGAGAGAGTTTGCATTGCGAGATCAGCTGCTGAGCGGCAGGCCACTGAAAATGAAAACTTGTACAATAGATCAAAAGAGTATAACATCAGTTTGCAGCAGTACAATAGTAGCCTTCAGGCAAATCTTGACGCAGCTAGTGCGGCACAAAAACGACTGGAAACAGAGAAATCAAGTATTGTTGAGAACCTTAGCAATGTTAGAGGCCACAATAAGGCATTGCAAGAGCAGTTGGCATCTCATAAAGCTTCACAGGAAGAGGCTACAAAGGCAAAAGACATGTTAGCTAATGAACTCAAATGCCTCCGAGATGAACTAAAACAAATTAGAGACGACCGTGATCGCCAATTGGGACAAGTACAAGCTTTAACTGGAGAGGTAGCAAAATACAAAGAGTATACGGGGAAATCAAGTGAACAGTTGGGTACATTGACGGCTAAAACAAATGCTCTCGAGGAAGTATGTACTTCACAAAGGCAACAAATAGATATGTTGCAGCAGCAGTTGAATGCCGAAAAGGAGAAGTTAAAGATGGCCGATTTGTCCTTTTCGGAAACACAAACGGTGTTTGAAGACCAGAAAAGAACTATAGGTCAACTACGAGAGAGACTGGCTGAAAAAGAGCTCCAAGTAATTGAAGGAGAGACATTACGTAAAAAATTGCACAACACTATTCTGGAATTAAAAGGAAATATCCGTGTGTTCTGCCGTGTTCGACCTTTGCTACCAGACGATGGTCCTGCAGCAGACATGGTAGTTACTTTCCCTTCATCAACAGAAGCTCTTGGTCGAGGTGTTGAATTGGCACAGAGCGGCCAGAAGTACTCTTTTACATTTGACAAAGTATTTAATCAGGAGGCTTCACAGCAGGATGTTTTCACAGAGATTTCTCAGCTAGTACAAAGCGCGCTTGATGGATACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACGATGATTGGCAGGCCTGGCCCCCCTGAGCTGAAAGGCTTGATACCACGTTCACTTGAACAGATATTCCTTGTTAGTCAGTCTCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCTTCAGTACTTGAAATATACAACGAGACCATAAGGGATTTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTATACACGATGCCAATGGAAAAAACACATATGTTCCAGACCTGACTATTGTGGATGTTTGCGGTGCAGATGAGATTTCCGCCCTTCTAAAACAAGCTGCACAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAATCGTCGCGAAGTCACTTTGTCTTTACTCTGCGAATAAGTGGTGTTAATGAGAACACTGAACAACAGGTTCAAGGTGTGCTAAACCTGATAGATCTTGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACTGGGGACCGCCTGAATGAAACTAAGGCGATAAACAAAAGTCTCTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTTAGGAATTCTAAACTGACAACCCTTCTCCAGCCATGTCTCGGTGGAGATTCTAAGACTTTGATGTTTGTAAATATTTCACCCGATCCATCTTCGACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCCGCGAGAGTAAATAGTTGTGAGATTGGTATTCCTCGGCGCCAGACATCCATGAAGGCCTCTGATTCTCGTTTGAGCTATGGCTAA
Protein sequence

>Msa0233070

MSSRNQNRAPSPSNMQKKGGGAEENKRRRIGGERMVVQGRGRAPLGSLNNKSDTNDGAGAGATEGSEPSIIEFTKEEVEALLTEKMKKGNPLDTKKKMEQMVDLIKRLKNCVRWFKVVEEGYIKEKEKLQTDLESAEKKCVDTAELNEAISNLRMTISSLEEKIAKEESDKLEVMECYRKEKEARNEAEQMQVSLSTELERVCIARSAAERQATENENLYNRSKEYNISLQQYNSSLQANLDAASAAQKRLETEKSSIVENLSNVRGHNKALQEQLASHKASQEEATKAKDMLANELKCLRDELKQIRDDRDRQLGQVQALTGEVAKYKEYTGKSSEQLGTLTAKTNALEEVCTSQRQQIDMLQQQLNAEKEKLKMADLSFSETQTVFEDQKRTIGQLRERLAEKELQVIEGETLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVTFPSSTEALGRGVELAQSGQKYSFTFDKVFNQEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQSLKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIIHDANGKNTYVPDLTIVDVCGADEISALLKQAAQSRSVGRTQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSMKASDSRLSYG*