AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0098500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0098500 MtrunA17_Chr1g0151501 99.432 1057 5 1 1 1057 1 1056 0.0 2194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0098500 AT2G26080.1 84.717 1060 137 7 1 1055 1 1040 0.0 1834
Msa0098500 AT4G33010.1 84.499 1058 136 5 1 1055 1 1033 0.0 1834
Msa0098500 AT4G33010.2 84.747 990 127 4 1 987 1 969 0.0 1714

Find 339 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGTGCAATAGCTTTA+AGG 0.075284 1_3:-4488706 None:intergenic
CCAGGAAATGTTCGACAATT+TGG 0.125124 1_3:+4490315 Msa0098500:intron
TATTGACTTAAGAGGCTTTA+AGG 0.138981 1_3:+4492117 Msa0098500:CDS
GGACAACTTATCTGCATTTA+TGG 0.170561 1_3:+4490953 Msa0098500:CDS
AGTGATCTTGAGGAATATTT+TGG 0.174246 1_3:+4487486 Msa0098500:CDS
GTTGGTGGATTTCACGGTTC+TGG 0.188035 1_3:+4487154 Msa0098500:CDS
ACTACCAATACAAATTTAAT+TGG 0.243233 1_3:-4494448 None:intergenic
CAAAGGGTTCATGGTCTTGC+TGG 0.252873 1_3:+4488722 Msa0098500:CDS
GGAATTGCATTCTGAAATTC+TGG 0.261041 1_3:-4489565 None:intergenic
GGATTTAGCTTCAAAGAATA+AGG 0.264235 1_3:+4487414 Msa0098500:CDS
GTGTTTCTTAGTTGATTATA+TGG 0.274492 1_3:+4494879 Msa0098500:three_prime_UTR
CTTGCTGGGGTATTTGCTTT+GGG 0.286242 1_3:+4488737 Msa0098500:CDS
TGGTCCTCATGCTGCCTTCT+TGG 0.289145 1_3:+4488038 Msa0098500:CDS
CAATTCCTTCTGGATTAGTT+AGG 0.290266 1_3:+4489581 Msa0098500:CDS
GGCCCTGGCATGGGTCCTAT+TGG 0.290920 1_3:+4491514 Msa0098500:CDS
ACACATATATTGCATAATTA+TGG 0.292649 1_3:+4494633 Msa0098500:three_prime_UTR
ACTGGTGGTTTAACAATGTT+GGG 0.294604 1_3:+4494856 Msa0098500:three_prime_UTR
TAGTATCTCAGCTGCACCTT+GGG 0.301015 1_3:+4491823 Msa0098500:CDS
TTCTGGTTCTGTTTCTGTTT+CGG 0.301131 1_3:+4494503 Msa0098500:three_prime_UTR
TCTTGCTGGGGTATTTGCTT+TGG 0.302519 1_3:+4488736 Msa0098500:CDS
TTTCAGAATGCAATTCCTTC+TGG 0.303780 1_3:+4489571 Msa0098500:CDS
CAGGAAATGTTCGACAATTT+GGG 0.304504 1_3:+4490316 Msa0098500:intron
TCCTTCAAACGGATTGATTT+CGG 0.304658 1_3:-4487331 None:intergenic
TATCTTGATGAAGATGAAAA+TGG 0.308710 1_3:-4487052 None:intergenic
GTGTACCCTCGTGGAGGTTC+TGG 0.314287 1_3:+4494486 Msa0098500:three_prime_UTR
GGTGTTAGTGTTGATTCTTC+TGG 0.315029 1_3:+4488105 Msa0098500:CDS
CGAAAAGCTAATAAGGTTAC+TGG 0.326602 1_3:+4494838 Msa0098500:three_prime_UTR
TGATGAAACAACTACATTAG+AGG 0.327719 1_3:+4489018 Msa0098500:CDS
TGGTACTGAAGGTGAGGTTT+TGG 0.332419 1_3:+4487858 Msa0098500:CDS
GCTGCATATTCCCTGGAATA+TGG 0.338323 1_3:-4492986 None:intergenic
TGGAGGAGGTGGCCCTGGCA+TGG 0.339348 1_3:+4491504 Msa0098500:CDS
ATCTTCCTAACTGGAGAATA+GGG 0.343225 1_3:-4494913 None:intergenic
GCAATAGCTTTAAGGCCTTC+AGG 0.343971 1_3:-4488698 None:intergenic
TTTCAAATCTTTCATTGGTA+TGG 0.346816 1_3:+4487438 Msa0098500:CDS
CGTGGTGTTGGTGGATTTCA+CGG 0.347506 1_3:+4487148 Msa0098500:CDS
GGCTCCGTGTTGCAAAGTTT+TGG 0.348939 1_3:+4493023 Msa0098500:CDS
CAACCAAATGCTGGTGCTGC+TGG 0.352688 1_3:+4490382 Msa0098500:CDS
AATACATACGTGTTAAAGAT+AGG 0.353105 1_3:-4489625 None:intergenic
AGACGCTTCGCAACATCTTC+AGG 0.353636 1_3:-4492247 None:intergenic
CATCTTCCTAACTGGAGAAT+AGG 0.355207 1_3:-4494914 None:intergenic
TCTTCAACAGCCTGTGATGC+TGG 0.355526 1_3:-4494034 None:intergenic
GGAGGAGGTGGCCCTGGCAT+GGG 0.356958 1_3:+4491505 Msa0098500:CDS
TTGGTGGATTTCACGGTTCT+GGG 0.357664 1_3:+4487155 Msa0098500:CDS
CAACATAGCATCTTCCTAAC+TGG 0.358807 1_3:-4494922 None:intergenic
AAGATAGGGTGTGTCAAATA+AGG 0.363130 1_3:-4489610 None:intergenic
CGGTGGACATTACTGCCTCT+TGG 0.363403 1_3:+4494523 Msa0098500:three_prime_UTR
TTGAAACCTCCTGGTGAGTT+TGG 0.363911 1_3:+4487961 Msa0098500:CDS
GGTTGTGGTGAAAGATCTTA+AGG 0.369312 1_3:+4487786 Msa0098500:CDS
ATCAATTTGAGAGTTGTAGA+TGG 0.372080 1_3:+4488869 Msa0098500:CDS
GATGATTTCTTGACCCCATA+TGG 0.372501 1_3:-4495167 None:intergenic
TTTGGTGTTCCAATGGGTTA+TGG 0.377510 1_3:+4488015 Msa0098500:CDS
TGTTCACAACAATGTTCTTA+AGG 0.378676 1_3:+4492547 Msa0098500:CDS
AACAGAGGATCCAACGTGTT+TGG 0.381437 1_3:+4487106 Msa0098500:CDS
CATGTAGTTTGCATTCAAAA+TGG 0.382287 1_3:-4491927 None:intergenic
ACTTGGAACAGTGGAAGTTC+AGG 0.382456 1_3:+4488769 Msa0098500:CDS
AGCTGATGGATTTGAGCTTA+AGG 0.383209 1_3:+4487765 Msa0098500:CDS
AATGCATGGAGTGGAGTGTC+CGG 0.383883 1_3:+4494756 Msa0098500:three_prime_UTR
TCCGAAATCAATCCGTTTGA+AGG 0.385682 1_3:+4487330 Msa0098500:CDS
AGTTGTTGAGATACATTCAT+AGG 0.387713 1_3:+4489751 Msa0098500:CDS
ATGCTAACATTGGAGGTGTT+TGG 0.391212 1_3:-4495135 None:intergenic
CTGGGAGAAGGGTGCAGATC+AGG 0.394336 1_3:-4494015 None:intergenic
AAGTGTTTCTTTACACCAAT+AGG 0.394998 1_3:-4491529 None:intergenic
TGTTATGGCAAGTGATCTAT+TGG 0.395148 1_3:+4487927 Msa0098500:CDS
TGCAAGATCATCCATGATAA+TGG 0.396584 1_3:+4491139 Msa0098500:CDS
AGCAGCATCTGCAATTGCTT+TGG 0.397575 1_3:-4488834 None:intergenic
CTCATGGACTATGGATTTCA+TGG 0.402965 1_3:+4492268 Msa0098500:CDS
AAGGATATTGATTACAAATC+CGG 0.405505 1_3:+4487805 Msa0098500:CDS
GCCTGTTCAGTTGGTGCAAA+AGG 0.405607 1_3:-4489894 None:intergenic
GCGAAGCGTCTCATGGACTA+TGG 0.405977 1_3:+4492259 Msa0098500:CDS
GCTATTGCACAAAGGGTTCA+TGG 0.406768 1_3:+4488713 Msa0098500:CDS
TAATGAGGTTAAGGTTGTTA+TGG 0.406873 1_3:+4487912 Msa0098500:CDS
CATGCCAATTAAATTTGTAT+TGG 0.407275 1_3:+4494444 Msa0098500:three_prime_UTR
TCTCCAGCAGCACCAGCATT+TGG 0.407510 1_3:-4490385 None:intergenic
GTTGGTTCAGCTCAGAGATT+TGG 0.410123 1_3:+4487997 Msa0098500:CDS
GCAGGGACTGTATGATGAAT+AGG 0.412261 1_3:-4494129 None:intergenic
ACAGTGGAAGTTCAGGATCT+TGG 0.413841 1_3:+4488776 Msa0098500:CDS
GAGTTCATTATTGACTTAAG+AGG 0.413841 1_3:+4492109 Msa0098500:CDS
TCCCTTGGCATCAGTTCCTA+TGG 0.414977 1_3:-4490886 None:intergenic
TACTGGTGGTTTAACAATGT+TGG 0.415341 1_3:+4494855 Msa0098500:three_prime_UTR
CTTCTGGTGTAGCTGAGTTA+TGG 0.417012 1_3:-4487243 None:intergenic
GGCTCATGCTAATGAGGTTA+AGG 0.417957 1_3:+4487903 Msa0098500:CDS
TCCTCTGTAACAGCATTCAA+TGG 0.418997 1_3:+4486925 Msa0098500:exon
CTTGGTTGGATGGTTGAGTT+GGG 0.419334 1_3:+4494541 Msa0098500:three_prime_UTR
TGCATTCAGCTTCATTGTAC+AGG 0.419465 1_3:-4489823 None:intergenic
CACCCTTCTCCCAGCATCAC+AGG 0.420165 1_3:+4494024 Msa0098500:CDS
TGACGCGTCAGTGAGTCCTT+TGG 0.420539 1_3:-4491897 None:intergenic
GGTGTTCTTGTTCAGTATCC+TGG 0.423926 1_3:+4487838 Msa0098500:CDS
CTAACACCAATGATTCTTCC+AGG 0.426159 1_3:-4488090 None:intergenic
CCTCATGGAGGAGGTGGCCC+TGG 0.427915 1_3:+4491499 Msa0098500:CDS
TGCATTCCTCATGGAGGAGG+TGG 0.428528 1_3:+4491493 Msa0098500:CDS
TTCTCTTTGCAACCAAATGC+TGG 0.431435 1_3:+4490373 Msa0098500:CDS
GCAAAAGGGCAGTGGGTTTG+TGG 0.434429 1_3:+4494585 Msa0098500:three_prime_UTR
TTTCCATTGTAGAATACTGC+TGG 0.436453 1_3:+4492217 Msa0098500:intron
CTTACAAGCCCAGGTTGGAT+TGG 0.439044 1_3:+4491433 Msa0098500:CDS
TATGTGTAATAATATTCAAA+AGG 0.439913 1_3:+4487675 Msa0098500:CDS
GGTCTTCTTCCTAATGCAAA+AGG 0.441068 1_3:+4494570 Msa0098500:three_prime_UTR
TGTGTATCGAAAAGCTAATA+AGG 0.441266 1_3:+4494831 Msa0098500:three_prime_UTR
ATTACTGCCTCTTGGTTGGA+TGG 0.441618 1_3:+4494531 Msa0098500:three_prime_UTR
GCTATGTATGTGTAAGAGAT+AGG 0.441736 1_3:-4491863 None:intergenic
CCTTAAAGCTATTGCACAAA+GGG 0.443002 1_3:+4488706 Msa0098500:CDS
TCATAAACACCGTGAGTTGA+AGG 0.444064 1_3:-4491097 None:intergenic
TTCAAATCTTTCATTGGTAT+GGG 0.444511 1_3:+4487439 Msa0098500:CDS
TTTGGAGCTGATATTGTTGT+TGG 0.444709 1_3:+4487979 Msa0098500:CDS
TCAACAACTCGTGCTCAGTT+TGG 0.447601 1_3:-4489737 None:intergenic
TCTTGGTTGGATGGTTGAGT+TGG 0.447806 1_3:+4494540 Msa0098500:three_prime_UTR
TTGACTCCACGGAAAAGAAC+CGG 0.448446 1_3:-4492070 None:intergenic
TTCAATGTTAATGTTTCCCT+TGG 0.448994 1_3:-4490901 None:intergenic
CTTAGTTGATTATATGGCTA+TGG 0.449172 1_3:+4494885 Msa0098500:three_prime_UTR
AGCATAAACTAGAGCCATAT+GGG 0.450033 1_3:+4495153 Msa0098500:three_prime_UTR
AAGTTTAACAAGTTTGATGA+AGG 0.454491 1_3:+4487358 Msa0098500:CDS
TAAACTTCATTTCCTTCAAA+CGG 0.456298 1_3:-4487342 None:intergenic
GCTTTGGGACTAAAGAAACT+TGG 0.456980 1_3:+4488752 Msa0098500:CDS
TGGATTATCATCATTATCAT+AGG 0.458084 1_3:-4494173 None:intergenic
CATGGACAAAGCCATATTCC+AGG 0.458564 1_3:+4492975 Msa0098500:CDS
CTTCTGGAAAGCCAGCTTTG+AGG 0.459054 1_3:+4488121 Msa0098500:CDS
CTACTTCACAAGAGTATAAG+AGG 0.460885 1_3:+4488061 Msa0098500:CDS
CAGAGATTTGGTGTTCCAAT+GGG 0.461737 1_3:+4488009 Msa0098500:CDS
AATTCCTTCTGGATTAGTTA+GGG 0.462600 1_3:+4489582 Msa0098500:CDS
CACTCATACACACACTTCAA+TGG 0.467366 1_3:+4486820 Msa0098500:five_prime_UTR
CGTTGCAGGCTGAGTTGGAT+AGG 0.470899 1_3:+4492462 Msa0098500:intron
AACATCGTTGCAGGCTGAGT+TGG 0.474673 1_3:+4492457 Msa0098500:intron
GATGGTTGAGTTGGGTGTGG+TGG 0.476250 1_3:+4494549 Msa0098500:three_prime_UTR
TGCGAAATCTCAGCTTGATA+AGG 0.476443 1_3:-4487538 None:intergenic
AATGCTTCATTGCTTGATGA+AGG 0.479733 1_3:+4487628 Msa0098500:CDS
GGTTATCCGTGCATATCATA+TGG 0.480243 1_3:+4490423 Msa0098500:CDS
CTAGTTTATGCTAACATTGG+AGG 0.480309 1_3:-4495142 None:intergenic
TTCCTAATGCAAAAGGGCAG+TGG 0.480664 1_3:+4494577 Msa0098500:three_prime_UTR
TTGGATGGTTGAGTTGGGTG+TGG 0.480761 1_3:+4494546 Msa0098500:three_prime_UTR
TTATGGTGAGTTTATTAAGA+AGG 0.480802 1_3:+4487882 Msa0098500:CDS
ACAGCATATCCGTAGGGATA+AGG 0.480846 1_3:+4488164 Msa0098500:CDS
AAGCAAAAGTTAATAGCTGC+AGG 0.481716 1_3:-4494147 None:intergenic
AAAGGGTTCATGGTCTTGCT+GGG 0.486903 1_3:+4488723 Msa0098500:CDS
ATCCAGTGATGGTACACAAC+AGG 0.487296 1_3:-4490342 None:intergenic
AGTAGCCCTATTCTCCAGTT+AGG 0.487780 1_3:+4494908 Msa0098500:three_prime_UTR
GAAATTGCTGAGATTGAGAA+AGG 0.487851 1_3:+4492515 Msa0098500:CDS
TAGCATAAACTAGAGCCATA+TGG 0.488311 1_3:+4495152 Msa0098500:three_prime_UTR
CATAGCGGCACTAGCAGGAT+TGG 0.490500 1_3:-4490844 None:intergenic
TCAGAGATTTGGTGTTCCAA+TGG 0.490894 1_3:+4488008 Msa0098500:CDS
GACCTGTTGTGTACCATCAC+TGG 0.491033 1_3:+4490340 Msa0098500:CDS
TTAGGCACTGCTTGCAAACA+TGG 0.491272 1_3:+4488649 Msa0098500:intron
TGGCACCATCCATGTATACT+TGG 0.491358 1_3:-4491165 None:intergenic
TAATGCAGACATTGCGGTGG+TGG 0.494171 1_3:-4490800 None:intergenic
GCAACACGGAGCCATGGAGC+AGG 0.495252 1_3:-4493013 None:intergenic
ACATCTGCTCCAATCCAACC+TGG 0.496233 1_3:-4491442 None:intergenic
TAAGAAGGCTCATGCTAATG+AGG 0.496688 1_3:+4487897 Msa0098500:CDS
ATGCATGGAGTGGAGTGTCC+GGG 0.497698 1_3:+4494757 Msa0098500:three_prime_UTR
TAGCAACATTTGCACTGCTC+AGG 0.497798 1_3:+4488191 Msa0098500:CDS
GGCTCAATCATGAGTGTACC+AGG 0.499797 1_3:-4492313 None:intergenic
TCATCCACCATCACTGCTCA+TGG 0.499896 1_3:+4492946 Msa0098500:CDS
TTTCAAAGCTTCAACAGTGA+TGG 0.500168 1_3:-4487197 None:intergenic
TGCATAGCCATCCTCAAAGC+TGG 0.501347 1_3:-4488132 None:intergenic
TGAGGATGGCTATGCAAACT+CGG 0.502108 1_3:+4488139 Msa0098500:CDS
GGTGCTGCTGGAGAATATGC+TGG 0.503788 1_3:+4490394 Msa0098500:CDS
TCCATTGAATGCTGTTACAG+AGG 0.504011 1_3:-4486926 None:intergenic
ACCAGTGAGATCAGTAATCA+AGG 0.506686 1_3:-4487593 None:intergenic
CGTCTTGCGAATGTATCACT+TGG 0.506897 1_3:-4487220 None:intergenic
ACTCACGGTGTTTATGAAGA+AGG 0.509508 1_3:+4491103 Msa0098500:CDS
TTTAAAGGTTGAGCTTCACT+TGG 0.511533 1_3:+4494697 Msa0098500:three_prime_UTR
TAACATTGAAGAGTTGAAGA+AGG 0.514343 1_3:+4490914 Msa0098500:CDS
TGGATTTGAGCTTAAGGTTG+TGG 0.514464 1_3:+4487771 Msa0098500:CDS
ATACTTGGCCTCCATTATCA+TGG 0.514735 1_3:-4491150 None:intergenic
TGGTTCTGTTTCTGTTTCGG+TGG 0.515318 1_3:+4494506 Msa0098500:three_prime_UTR
TTGACTGTGTTGAAACCTCC+TGG 0.515980 1_3:+4487952 Msa0098500:CDS
ACACCAATAGGACCCATGCC+AGG 0.516635 1_3:-4491517 None:intergenic
AGATGTTGCGAAGCGTCTCA+TGG 0.516911 1_3:+4492252 Msa0098500:CDS
GCTCTAGTTTATGCTAACAT+TGG 0.518493 1_3:-4495145 None:intergenic
AAAATATTCCTCAAGATCAC+TGG 0.518936 1_3:-4487484 None:intergenic
GGACATTACTGCCTCTTGGT+TGG 0.519008 1_3:+4494527 Msa0098500:three_prime_UTR
TCCTAATGCAAAAGGGCAGT+GGG 0.523326 1_3:+4494578 Msa0098500:three_prime_UTR
TAATGGAGGCCAAGTATACA+TGG 0.524175 1_3:+4491156 Msa0098500:CDS
CCTGAAAATGCTCAACCACT+TGG 0.525234 1_3:+4491800 Msa0098500:CDS
CACTGCTCATGGCTGATGCA+TGG 0.526043 1_3:+4492957 Msa0098500:CDS
ATGTGTAATAATATTCAAAA+GGG 0.527153 1_3:+4487676 Msa0098500:CDS
ATGATGCCTGGAAGAATCAT+TGG 0.527525 1_3:+4488084 Msa0098500:CDS
GAGTCCTTTGGAACCCATCA+TGG 0.527774 1_3:-4491885 None:intergenic
TAATTATGCAATATATGTGT+TGG 0.529153 1_3:-4494630 None:intergenic
ACGGAGCCATGGAGCAGGGA+AGG 0.529571 1_3:-4493008 None:intergenic
AGCATTTGGTTGCAAAGAGA+AGG 0.532317 1_3:-4490371 None:intergenic
TGAACAGGCTCAAGGTTACC+AGG 0.532780 1_3:+4489908 Msa0098500:CDS
TAACCTTGAGCCTGTTCAGT+TGG 0.534102 1_3:-4489903 None:intergenic
TGCTAGTAGCCTTATCCCTA+CGG 0.536845 1_3:-4488173 None:intergenic
GTAGTATCTCAGCTGCACCT+TGG 0.538239 1_3:+4491822 Msa0098500:CDS
TTTGTGATTTGGGGATTGCA+AGG 0.539548 1_3:+4494728 Msa0098500:three_prime_UTR
GGCACAGGCCATGACATTGT+TGG 0.541827 1_3:-4492292 None:intergenic
GCTATAATGAAGGTGCCAAC+TGG 0.541859 1_3:+4491764 Msa0098500:intron
TCAAATGATTGAACACATGA+AGG 0.542748 1_3:+4487393 Msa0098500:CDS
CTTCAACAGCCTGTGATGCT+GGG 0.543837 1_3:-4494033 None:intergenic
TACAAATCCGGTGATGTTTG+TGG 0.544316 1_3:+4487817 Msa0098500:CDS
ATGCAGCCTTCCCTGCTCCA+TGG 0.544987 1_3:+4493002 Msa0098500:CDS
CACATGTTCCGTTGACTCCA+CGG 0.545787 1_3:-4492081 None:intergenic
CCACACATAGCGGCACTAGC+AGG 0.547612 1_3:-4490849 None:intergenic
AACTTTGCAACACGGAGCCA+TGG 0.549304 1_3:-4493019 None:intergenic
ATACATACGTGTTAAAGATA+GGG 0.549745 1_3:-4489624 None:intergenic
TGGCTTCTTTGACACTGTGA+AGG 0.550026 1_3:+4488796 Msa0098500:CDS
AAACATAAATAAAGAATCAC+GGG 0.550724 1_3:-4495192 None:intergenic
TGCCACAGTATGATCCCACT+TGG 0.551785 1_3:+4489798 Msa0098500:CDS
CTCTTGTGAAGTAGCCAAGA+AGG 0.552647 1_3:-4488052 None:intergenic
GCTGTATATCATGGACCTGA+AGG 0.553442 1_3:+4488683 Msa0098500:CDS
GTTCAGTATCCTGGTACTGA+AGG 0.555244 1_3:+4487847 Msa0098500:CDS
TTCCATTGTAGAATACTGCT+GGG 0.556802 1_3:+4492218 Msa0098500:intron
GCCATGTATGCTGTATATCA+TGG 0.558355 1_3:+4488674 Msa0098500:CDS
AAAACCTCACCTTCAGTACC+AGG 0.558852 1_3:-4487856 None:intergenic
TTAACAAACTCCACCACCCC+CGG 0.559418 1_3:-4494775 None:intergenic
CAGCCTGTGATGCTGGGAGA+AGG 0.559918 1_3:-4494027 None:intergenic
AATGTTTCACGTGGTGTTGG+TGG 0.560420 1_3:+4487139 Msa0098500:CDS
GCCTACTGAAAGTGAAAGCA+AGG 0.560958 1_3:+4492333 Msa0098500:CDS
GAGTATAAGAGGATGATGCC+TGG 0.561735 1_3:+4488072 Msa0098500:CDS
GTCTTCTTCCTAATGCAAAA+GGG 0.564098 1_3:+4494571 Msa0098500:three_prime_UTR
ATGAGCAGTGATGGTGGATG+AGG 0.564489 1_3:-4492944 None:intergenic
GATGAAGATGAAAATGGAAG+AGG 0.565467 1_3:-4487046 None:intergenic
CACCATAGGAACTGATGCCA+AGG 0.565979 1_3:+4490884 Msa0098500:CDS
ATGATAACCATGGTGGGGAA+TGG 0.567284 1_3:-4495111 None:intergenic
GGACGTGTTGATAATGTGTA+TGG 0.567764 1_3:+4493983 Msa0098500:intron
TTGGTACCATGTGCTGAGAC+TGG 0.568887 1_3:-4490825 None:intergenic
GGGTGAATATCAGTAAAGCT+AGG 0.569209 1_3:-4489873 None:intergenic
CAGGTGGGACTTACAAGCCC+AGG 0.570584 1_3:+4491424 Msa0098500:intron
AAAACATAAATAAAGAATCA+CGG 0.571310 1_3:-4495193 None:intergenic
AGGGAAGGCTGCATATTCCC+TGG 0.574104 1_3:-4492993 None:intergenic
ATATGTAAGACAAGAGCTGA+TGG 0.575721 1_3:+4487751 Msa0098500:CDS
GCACCAACTGAACAGGCTCA+AGG 0.576923 1_3:+4489900 Msa0098500:CDS
TGGAAAGCCAGCTTTGAGGA+TGG 0.577107 1_3:+4488125 Msa0098500:CDS
AAACTACATGGCGAAACGAT+TGG 0.577356 1_3:+4491940 Msa0098500:CDS
ACAATGTCATGGCCTGTGCC+TGG 0.578944 1_3:+4492295 Msa0098500:CDS
TTTGATGAAGGGTTAACAGA+AGG 0.579522 1_3:+4487370 Msa0098500:CDS
TCCATGATATACAGCATACA+TGG 0.580171 1_3:-4488675 None:intergenic
GGAATGAAAATTGTCACCAT+AGG 0.580449 1_3:+4490870 Msa0098500:CDS
GCCTTAAAGCTATTGCACAA+AGG 0.580972 1_3:+4488705 Msa0098500:CDS
ACTACTTACCACAGGGTGTG+AGG 0.582382 1_3:-4491566 None:intergenic
AGCAATGTTTCACGTGGTGT+TGG 0.583378 1_3:+4487136 Msa0098500:CDS
GGGGCAGGAATTCCACCAGT+TGG 0.584936 1_3:-4491779 None:intergenic
CTGAAATGATGCCTGTGACA+TGG 0.586910 1_3:+4489850 Msa0098500:CDS
ACTTCTGTAGAGTTATTACC+CGG 0.587226 1_3:+4492051 Msa0098500:intron
CCTGTTCAGTTGGTGCAAAA+GGG 0.588402 1_3:-4489893 None:intergenic
ATGTTCCACCAGTGATCTTG+AGG 0.588665 1_3:+4487476 Msa0098500:CDS
CCTGCTAGTGCCGCTATGTG+TGG 0.589521 1_3:+4490849 Msa0098500:CDS
GAAGTGTGTGTATGAGTGAA+GGG 0.590528 1_3:-4486815 None:intergenic
ACCTTGCTTTCACTTTCAGT+AGG 0.590697 1_3:-4492334 None:intergenic
AGTATCTCAGCTGCACCTTG+GGG 0.590798 1_3:+4491824 Msa0098500:CDS
CTACTTACCACAGGGTGTGA+GGG 0.591196 1_3:-4491565 None:intergenic
GGTGTTCCAATGGGTTATGG+TGG 0.593057 1_3:+4488018 Msa0098500:CDS
TGGAGAATATGCTGGACTCA+TGG 0.594256 1_3:+4490402 Msa0098500:CDS
ATCATGAGTGTACCAGGCAC+AGG 0.594276 1_3:-4492307 None:intergenic
TCTGAAACGTCTTCTTTCAG+AGG 0.595919 1_3:+4486979 Msa0098500:CDS
GTCTCCCTAACTAATCCAGA+AGG 0.596032 1_3:-4489586 None:intergenic
GAGGATGGCTATGCAAACTC+GGG 0.597339 1_3:+4488140 Msa0098500:CDS
AGTTTAACAAGTTTGATGAA+GGG 0.597750 1_3:+4487359 Msa0098500:CDS
TGCATGGAGTGGAGTGTCCG+GGG 0.598806 1_3:+4494758 Msa0098500:three_prime_UTR
TTACACATACATAGCCATGA+TGG 0.598851 1_3:+4491871 Msa0098500:CDS
GTAAAGCTAGGCCATGTCAC+AGG 0.599465 1_3:-4489861 None:intergenic
ATTGCAAGGTGGAAAATGCA+TGG 0.599611 1_3:+4494742 Msa0098500:three_prime_UTR
GTATCCTGGTACTGAAGGTG+AGG 0.599692 1_3:+4487852 Msa0098500:CDS
GCATCAGCCATGAGCAGTGA+TGG 0.600284 1_3:-4492953 None:intergenic
CTACATGGCGAAACGATTGG+AGG 0.600659 1_3:+4491943 Msa0098500:CDS
TGCAAGCAACAATGCTACCA+CGG 0.600676 1_3:-4494660 None:intergenic
TACACATACATAGCCATGAT+GGG 0.601681 1_3:+4491872 Msa0098500:CDS
GAAGGGTGCAGATCAGGTTG+CGG 0.602664 1_3:-4494009 None:intergenic
GGGTACACTTAGACGGAGGA+AGG 0.603790 1_3:-4494471 None:intergenic
GAAGGAATCAAATCCAGTGA+TGG 0.605184 1_3:-4490353 None:intergenic
ATTATCATCATTATCATAGG+AGG 0.606094 1_3:-4494170 None:intergenic
ACAAACCTGTGCATTCATGT+TGG 0.606384 1_3:-4491185 None:intergenic
ACGAGGGTACACTTAGACGG+AGG 0.607845 1_3:-4494475 None:intergenic
GAAAACAGAGTTTGAAACAG+AGG 0.608096 1_3:-4487080 None:intergenic
ATATTCCTCAAGATCACTGG+TGG 0.611568 1_3:-4487481 None:intergenic
TGACTCCACGGAAAAGAACC+GGG 0.613242 1_3:-4492069 None:intergenic
TGGGACTTACAAGCCCAGGT+TGG 0.613288 1_3:+4491428 Msa0098500:CDS
TATCAAGCTGAGATTTCGCA+AGG 0.613962 1_3:+4487541 Msa0098500:CDS
ACCTTGATTACTGATCTCAC+TGG 0.613967 1_3:+4487592 Msa0098500:CDS
AAGAACACCACAAACATCAC+CGG 0.614174 1_3:-4487824 None:intergenic
AGATGGATATGAGTTGTGGT+AGG 0.614556 1_3:-4494234 None:intergenic
ATGAAACTTAAGAAGAGCAG+TGG 0.615191 1_3:-4494193 None:intergenic
ATATGTGTTGGTATAGCAAG+TGG 0.615588 1_3:-4494618 None:intergenic
TTCATGGACCAACAATGTCA+TGG 0.616001 1_3:+4492284 Msa0098500:CDS
TTTGGTATGATAACCATGGT+GGG 0.616227 1_3:-4495117 None:intergenic
GTTACATATCCTTCAACTCA+CGG 0.616918 1_3:+4491088 Msa0098500:CDS
GCTGTTTCTTCCAAACACGT+TGG 0.617148 1_3:-4487116 None:intergenic
CACCAATAGGACCCATGCCA+GGG 0.618161 1_3:-4491516 None:intergenic
GCATGGAGTGGAGTGTCCGG+GGG 0.618341 1_3:+4494759 Msa0098500:three_prime_UTR
TCCACGAGGGTACACTTAGA+CGG 0.618659 1_3:-4494478 None:intergenic
TGAGGACCACCATAACCCAT+TGG 0.618896 1_3:-4488024 None:intergenic
AGCAATGAAGCATTTGACAT+AGG 0.619218 1_3:-4487619 None:intergenic
ATAATGAAGGTGCCAACTGG+TGG 0.619660 1_3:+4491767 Msa0098500:intron
AAAGCTAATAAGGTTACTGG+TGG 0.620023 1_3:+4494841 Msa0098500:three_prime_UTR
CTGGTGGTTTAACAATGTTG+GGG 0.623001 1_3:+4494857 Msa0098500:three_prime_UTR
TTACATATATCAATAGTCTG+TGG 0.626597 1_3:-4487736 None:intergenic
CATCTGCTCCAATCCAACCT+GGG 0.626798 1_3:-4491441 None:intergenic
GAGGAATGCAAAATGTCTTG+TGG 0.626937 1_3:-4491480 None:intergenic
ATATCAGCTCCAAACTCACC+AGG 0.628005 1_3:-4487970 None:intergenic
TCCGTCTAAGTGTACCCTCG+TGG 0.628839 1_3:+4494477 Msa0098500:three_prime_UTR
CAACACGGAGCCATGGAGCA+GGG 0.629985 1_3:-4493012 None:intergenic
TGAAGTGTGTGTATGAGTGA+AGG 0.631131 1_3:-4486816 None:intergenic
AGCCTGTGATGCTGGGAGAA+GGG 0.633395 1_3:-4494026 None:intergenic
AGCAAAAGTTAATAGCTGCA+GGG 0.633460 1_3:-4494146 None:intergenic
TGGAAATTAAAATAGAACAA+TGG 0.633910 1_3:-4494089 None:intergenic
GGAGGCCAAGTATACATGGA+TGG 0.634003 1_3:+4491160 Msa0098500:CDS
GAAGACGTTTCAGAGTTGCA+CGG 0.641264 1_3:-4486970 None:intergenic
TCGGGAACAGCATATCCGTA+GGG 0.641658 1_3:+4488158 Msa0098500:CDS
GTATACTGAGTATACCAAGC+AGG 0.641812 1_3:-4487514 None:intergenic
ACCATACCATATGATATGCA+CGG 0.644171 1_3:-4490429 None:intergenic
ATAGCCATGATGGGTTCCAA+AGG 0.644476 1_3:+4491881 Msa0098500:CDS
GGTGAGATGGATATGAGTTG+TGG 0.644895 1_3:-4494238 None:intergenic
TGAAGAACCATTCCCCACCA+TGG 0.645976 1_3:+4495104 Msa0098500:three_prime_UTR
GTGATTTGGGGATTGCAAGG+TGG 0.646830 1_3:+4494731 Msa0098500:three_prime_UTR
GTCTAAGTGTACCCTCGTGG+AGG 0.648557 1_3:+4494480 Msa0098500:three_prime_UTR
ATGGACAAAGCCATATTCCA+GGG 0.649072 1_3:+4492976 Msa0098500:CDS
GGAATAACACTATTATGCTG+TGG 0.649282 1_3:-4494068 None:intergenic
TGGTGCCAACATGAATGCAC+AGG 0.649644 1_3:+4491180 Msa0098500:CDS
CTCGGGAACAGCATATCCGT+AGG 0.650088 1_3:+4488157 Msa0098500:CDS
ACTAAAGAAACTTGGAACAG+TGG 0.650456 1_3:+4488760 Msa0098500:CDS
AACTCAACCATCCAACCAAG+AGG 0.651121 1_3:-4494538 None:intergenic
TATTGGTGTAAAGAAACACT+TGG 0.652793 1_3:+4491531 Msa0098500:CDS
GTAGCCAAGAAGGCAGCATG+AGG 0.652903 1_3:-4488042 None:intergenic
TCAGCCATGAGCAGTGATGG+TGG 0.657084 1_3:-4492950 None:intergenic
TGCATAATTATGGAGAGCCG+TGG 0.660075 1_3:+4494643 Msa0098500:three_prime_UTR
ACCATAGGAACTGATGCCAA+GGG 0.662243 1_3:+4490885 Msa0098500:CDS
ATGTCTTGTGGAGATTGAGA+TGG 0.662787 1_3:-4491468 None:intergenic
AAGATCATCCATGATAATGG+AGG 0.664150 1_3:+4491142 Msa0098500:CDS
TAGGCCAAAACTTTGCAACA+CGG 0.664150 1_3:-4493027 None:intergenic
AAGGGTTCATGGTCTTGCTG+GGG 0.665689 1_3:+4488724 Msa0098500:CDS
ACAACATGCTTACCATTGGT+AGG 0.666070 1_3:-4493046 None:intergenic
TTCATTGTACAGGATCCAAG+TGG 0.667793 1_3:-4489813 None:intergenic
ATTATACCAGTCTCAGCACA+TGG 0.669363 1_3:+4490819 Msa0098500:CDS
GTTTGGTATGATAACCATGG+TGG 0.677617 1_3:-4495118 None:intergenic
CCAGGGCCACCTCCTCCATG+AGG 0.682437 1_3:-4491499 None:intergenic
TCATTGTACAGGATCCAAGT+GGG 0.695896 1_3:-4489812 None:intergenic
GAAGGCTGCTGAAACACACA+AGG 0.698024 1_3:+4490932 Msa0098500:CDS
GCATAAACTAGAGCCATATG+GGG 0.701986 1_3:+4495154 Msa0098500:three_prime_UTR
ATCCAAGTGGGATCATACTG+TGG 0.704371 1_3:-4489800 None:intergenic
AATATGAGCGCTGATCCCCA+AGG 0.710914 1_3:-4491839 None:intergenic
AGAAACAGCAATGTTTCACG+TGG 0.715615 1_3:+4487130 Msa0098500:CDS
TATGTGAAACTGTAGTCAAG+AGG 0.724753 1_3:+4490774 Msa0098500:intron
CTGGTATAATGCAGACATTG+CGG 0.730670 1_3:-4490806 None:intergenic
GGTGTTTGGTATGATAACCA+TGG 0.732891 1_3:-4495121 None:intergenic
AAGGTGGAAAATGCATGGAG+TGG 0.733364 1_3:+4494747 Msa0098500:three_prime_UTR
TCAGCTCCAAACTCACCAGG+AGG 0.736358 1_3:-4487967 None:intergenic
CAGAACCAGAACCTCCACGA+GGG 0.744854 1_3:-4494491 None:intergenic
TTGGTATGATAACCATGGTG+GGG 0.745605 1_3:-4495116 None:intergenic
GCAGCTGAGATACTACCAAG+TGG 0.755051 1_3:-4491815 None:intergenic
GTATAATGCAGACATTGCGG+TGG 0.758730 1_3:-4490803 None:intergenic
ACAGAACCAGAACCTCCACG+AGG 0.776817 1_3:-4494492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGAAAATAATTATTTGT+TGG - chr1_3:4489204-4489223 None:intergenic 10.0%
!! TATGTGTAATAATATTCAAA+AGG + chr1_3:4487675-4487694 Msa0098500:CDS 15.0%
!! ATGTGTAATAATATTCAAAA+GGG + chr1_3:4487676-4487695 Msa0098500:CDS 15.0%
!! TGTAAAAATAAAAGTTTAGA+TGG - chr1_3:4489515-4489534 None:intergenic 15.0%
!! TTGATAAATAAGAGTAATAT+TGG + chr1_3:4490088-4490107 Msa0098500:intron 15.0%
!!! TTTTCATTTCGTATAATAAT+TGG + chr1_3:4490633-4490652 Msa0098500:intron 15.0%
!!! TTGTTTTTGATTTAAATTGT+AGG + chr1_3:4491066-4491085 Msa0098500:intron 15.0%
!!! AAAGTTTTGTTTAAATACTA+TGG + chr1_3:4493602-4493621 Msa0098500:intron 15.0%
!!! GCTTTTTTTTTTTGTATAAT+GGG - chr1_3:4494262-4494281 None:intergenic 15.0%
!!! TGCTTTTTTTTTTTGTATAA+TGG - chr1_3:4494263-4494282 None:intergenic 15.0%
!!! TTGACATTTTTATGATATAT+AGG - chr1_3:4494342-4494361 None:intergenic 15.0%
!!! AAAAACTAGAGAATTTTTAA+AGG + chr1_3:4494682-4494701 Msa0098500:three_prime_UTR 15.0%
!!! TTTTGGTTTTGATTTGTTTA+AGG - chr1_3:4486872-4486891 None:intergenic 20.0%
!!! ATTCTCTGTTGTTTAAAATT+TGG - chr1_3:4488346-4488365 None:intergenic 20.0%
!!! AATTTAGGATTAAAACTTAC+AGG - chr1_3:4489082-4489101 None:intergenic 20.0%
!!! TGTAAGTTTTAATCCTAAAT+TGG + chr1_3:4489081-4489100 Msa0098500:intron 20.0%
!!! TACTTTAGTTTTTTACCAAA+CGG - chr1_3:4489109-4489128 None:intergenic 20.0%
!! ATGGATAAACTAATTGATAT+CGG + chr1_3:4489131-4489150 Msa0098500:intron 20.0%
!!! GAAAATAATTATTTGTTGGT+AGG - chr1_3:4489200-4489219 None:intergenic 20.0%
!!! ACAATTGATAATTGTGTAAA+AGG - chr1_3:4489483-4489502 None:intergenic 20.0%
!!! CTAAACTTTTATTTTTACAC+AGG + chr1_3:4489516-4489535 Msa0098500:intron 20.0%
!!! TGAATTGAAATTTTGTGAAA+AGG - chr1_3:4489651-4489670 None:intergenic 20.0%
!! ATATGTTCTTATATATGTTG+CGG + chr1_3:4490235-4490254 Msa0098500:intron 20.0%
!! TAATTCAAGACAATAATGTA+GGG - chr1_3:4490714-4490733 None:intergenic 20.0%
!! TTAATTCAAGACAATAATGT+AGG - chr1_3:4490715-4490734 None:intergenic 20.0%
!!! ATACAGGTTTTTATTGAATA+TGG - chr1_3:4493663-4493682 None:intergenic 20.0%
!!! AGAAAATCTTTGAAATATAC+AGG - chr1_3:4493679-4493698 None:intergenic 20.0%
!!! TATAGATATTTCAAGTATGT+AGG + chr1_3:4493817-4493836 Msa0098500:intron 20.0%
!!! TTATGTGTTTTCTTTATATC+AGG + chr1_3:4493962-4493981 Msa0098500:intron 20.0%
!! TGGAAATTAAAATAGAACAA+TGG - chr1_3:4494092-4494111 None:intergenic 20.0%
!! ACTACCAATACAAATTTAAT+TGG - chr1_3:4494451-4494470 None:intergenic 20.0%
!! TAATTATGCAATATATGTGT+TGG - chr1_3:4494633-4494652 None:intergenic 20.0%
!! ACACATATATTGCATAATTA+TGG + chr1_3:4494633-4494652 Msa0098500:three_prime_UTR 20.0%
! TATCTTGATGAAGATGAAAA+TGG - chr1_3:4487055-4487074 None:intergenic 25.0%
! TAAACTTCATTTCCTTCAAA+CGG - chr1_3:4487345-4487364 None:intergenic 25.0%
! AAGTTTAACAAGTTTGATGA+AGG + chr1_3:4487358-4487377 Msa0098500:CDS 25.0%
! AGTTTAACAAGTTTGATGAA+GGG + chr1_3:4487359-4487378 Msa0098500:CDS 25.0%
!! AAGGTTTTCAAATCTTTCAT+TGG + chr1_3:4487433-4487452 Msa0098500:CDS 25.0%
! TTTCAAATCTTTCATTGGTA+TGG + chr1_3:4487438-4487457 Msa0098500:CDS 25.0%
! TTCAAATCTTTCATTGGTAT+GGG + chr1_3:4487439-4487458 Msa0098500:CDS 25.0%
! TTACATATATCAATAGTCTG+TGG - chr1_3:4487739-4487758 None:intergenic 25.0%
!! AAGGATATTGATTACAAATC+CGG + chr1_3:4487805-4487824 Msa0098500:CDS 25.0%
! TTATGGTGAGTTTATTAAGA+AGG + chr1_3:4487882-4487901 Msa0098500:CDS 25.0%
! TTTAGTTATATATGTGTGTG+TGG + chr1_3:4488242-4488261 Msa0098500:intron 25.0%
!! TGAGATTAGTCAATACTAAA+CGG + chr1_3:4488473-4488492 Msa0098500:intron 25.0%
! ACATTGCTTCAACAATTTAA+AGG - chr1_3:4488572-4488591 None:intergenic 25.0%
!!! TTGAGGATTTTATTTGATTC+TGG + chr1_3:4488616-4488635 Msa0098500:intron 25.0%
! ACAAGAAAGAAAAAAAGAGA+AGG - chr1_3:4488918-4488937 None:intergenic 25.0%
! TAAAACCACTAAAACTGATT+TGG - chr1_3:4488945-4488964 None:intergenic 25.0%
! GGTAAAAAACTAAAGTATGA+TGG + chr1_3:4489112-4489131 Msa0098500:intron 25.0%
! ATAAACTAATTGATATCGGA+CGG + chr1_3:4489135-4489154 Msa0098500:intron 25.0%
! TAAAGCAGTCTTAATATATG+TGG - chr1_3:4489269-4489288 None:intergenic 25.0%
! ACATATATTAAGACTGCTTT+AGG + chr1_3:4489268-4489287 Msa0098500:intron 25.0%
! ATAATCTTCAAAAGTAAGTG+GGG - chr1_3:4489294-4489313 None:intergenic 25.0%
! GATAATCTTCAAAAGTAAGT+GGG - chr1_3:4489295-4489314 None:intergenic 25.0%
!!! CACTTACTTTTGAAGATTAT+CGG + chr1_3:4489294-4489313 Msa0098500:intron 25.0%
!!! ACTTACTTTTGAAGATTATC+GGG + chr1_3:4489295-4489314 Msa0098500:intron 25.0%
! ATACATACGTGTTAAAGATA+GGG - chr1_3:4489627-4489646 None:intergenic 25.0%
! AATACATACGTGTTAAAGAT+AGG - chr1_3:4489628-4489647 None:intergenic 25.0%
! TCACAAAATTTCAATTCATG+TGG + chr1_3:4489653-4489672 Msa0098500:intron 25.0%
!! CTCATATTAACTGTCTTTTA+AGG + chr1_3:4489943-4489962 Msa0098500:intron 25.0%
! CTTCACAAATTAGTTAGTAT+AGG - chr1_3:4489997-4490016 None:intergenic 25.0%
!! ACATATCAAAGTGTCAAATT+TGG - chr1_3:4490163-4490182 None:intergenic 25.0%
!!! ATTAAAAGTGTTGTGAAACT+TGG + chr1_3:4491025-4491044 Msa0098500:intron 25.0%
!!! TTAAAAGTGTTGTGAAACTT+GGG + chr1_3:4491026-4491045 Msa0098500:intron 25.0%
! CACAAAGTACATTAACATAA+AGG - chr1_3:4491224-4491243 None:intergenic 25.0%
! ATGTTAATGTACTTTGTGTT+AGG + chr1_3:4491226-4491245 Msa0098500:intron 25.0%
!! AACAAATCTCTCTTTCATTT+TGG + chr1_3:4491323-4491342 Msa0098500:intron 25.0%
!! TTTCTTCAATATCTTTTGGA+AGG - chr1_3:4491705-4491724 None:intergenic 25.0%
!! GTTCTTTCTTCAATATCTTT+TGG - chr1_3:4491709-4491728 None:intergenic 25.0%
! AAGATATTGAAGAAAGAACA+TGG + chr1_3:4491710-4491729 Msa0098500:intron 25.0%
! ATTATCTGTTGCTATAATGA+AGG + chr1_3:4491754-4491773 Msa0098500:intron 25.0%
!! GAAAGCAAGGTATTTATATA+TGG + chr1_3:4492346-4492365 Msa0098500:intron 25.0%
!!! AATATTTTTTCTTCCTAGGA+AGG - chr1_3:4492373-4492392 None:intergenic 25.0%
!!! GGATAATATTTTTTCTTCCT+AGG - chr1_3:4492377-4492396 None:intergenic 25.0%
!!! AGAAGAAAACAACTTGTTTT+AGG + chr1_3:4492623-4492642 Msa0098500:intron 25.0%
!!! GAAGAAAACAACTTGTTTTA+GGG + chr1_3:4492624-4492643 Msa0098500:intron 25.0%
! TAAGCATTTCTTAGACTATT+TGG + chr1_3:4492685-4492704 Msa0098500:intron 25.0%
! CAACATTTAGTACACTATTA+AGG - chr1_3:4492913-4492932 None:intergenic 25.0%
! TGAGTAAAATAGCTTGATTA+AGG + chr1_3:4493150-4493169 Msa0098500:intron 25.0%
! GAGTAAAATAGCTTGATTAA+GGG + chr1_3:4493151-4493170 Msa0098500:intron 25.0%
! TTACTCAATAAGCTATTCTA+GGG + chr1_3:4493175-4493194 Msa0098500:intron 25.0%
! TACATGCTAATATTAGTGTT+TGG - chr1_3:4493313-4493332 None:intergenic 25.0%
! ATTCTGTTATGCAATGAATT+AGG + chr1_3:4493567-4493586 Msa0098500:intron 25.0%
! TTCTGTTATGCAATGAATTA+GGG + chr1_3:4493568-4493587 Msa0098500:intron 25.0%
! GGATTAATTGTGTTTGATAA+GGG - chr1_3:4493737-4493756 None:intergenic 25.0%
! AGGATTAATTGTGTTTGATA+AGG - chr1_3:4493738-4493757 None:intergenic 25.0%
! ACTATAATAATAATCCCCTA+TGG - chr1_3:4493843-4493862 None:intergenic 25.0%
! TTAGTCAAACAAAATTATGC+AGG - chr1_3:4493926-4493945 None:intergenic 25.0%
! ATTATCATCATTATCATAGG+AGG - chr1_3:4494173-4494192 None:intergenic 25.0%
! TGGATTATCATCATTATCAT+AGG - chr1_3:4494176-4494195 None:intergenic 25.0%
! CATGCCAATTAAATTTGTAT+TGG + chr1_3:4494444-4494463 Msa0098500:three_prime_UTR 25.0%
! GTGTTTCTTAGTTGATTATA+TGG + chr1_3:4494879-4494898 Msa0098500:three_prime_UTR 25.0%
!!! GAGGAAAAATGGTGTTTTTT+TGG - chr1_3:4486889-4486908 None:intergenic 30.0%
ACCAGAAGAACAAACAAAAA+TGG + chr1_3:4487258-4487277 Msa0098500:CDS 30.0%
TCAAATGATTGAACACATGA+AGG + chr1_3:4487393-4487412 Msa0098500:CDS 30.0%
! GGATTTAGCTTCAAAGAATA+AGG + chr1_3:4487414-4487433 Msa0098500:CDS 30.0%
AAAATATTCCTCAAGATCAC+TGG - chr1_3:4487487-4487506 None:intergenic 30.0%
! AGTGATCTTGAGGAATATTT+TGG + chr1_3:4487486-4487505 Msa0098500:CDS 30.0%
TAATGAGGTTAAGGTTGTTA+TGG + chr1_3:4487912-4487931 Msa0098500:CDS 30.0%
TAGCCTTTAAATCACTTATG+TGG + chr1_3:4488312-4488331 Msa0098500:intron 30.0%
!! TTGTTTAAAATTTGGTGACG+CGG - chr1_3:4488338-4488357 None:intergenic 30.0%
AAAAGGTCTGAATACAATCT+GGG - chr1_3:4488401-4488420 None:intergenic 30.0%
! AGGTGTATTTCTACACAAAA+GGG - chr1_3:4488429-4488448 None:intergenic 30.0%
! AAGGTGTATTTCTACACAAA+AGG - chr1_3:4488430-4488449 None:intergenic 30.0%
GATACTTTGTACTTGTAACA+TGG + chr1_3:4488501-4488520 Msa0098500:intron 30.0%
ATACTTTGACTATCTTGTTC+AGG + chr1_3:4488537-4488556 Msa0098500:intron 30.0%
TTGCATAAGTGAATTAGTTG+AGG + chr1_3:4488599-4488618 Msa0098500:intron 30.0%
!! GGATTTTATTTGATTCTGGT+TGG + chr1_3:4488620-4488639 Msa0098500:intron 30.0%
ATCAATTTGAGAGTTGTAGA+TGG + chr1_3:4488869-4488888 Msa0098500:CDS 30.0%
GAAGGACAAAAAAACACTTA+CGG - chr1_3:4488900-4488919 None:intergenic 30.0%
!! TTGTACCAAATCAGTTTTAG+TGG + chr1_3:4488937-4488956 Msa0098500:intron 30.0%
!! TTAGTGGTTTTACATGTCTT+TGG + chr1_3:4488953-4488972 Msa0098500:intron 30.0%
TACATGTCTTTGGATTATGA+TGG + chr1_3:4488963-4488982 Msa0098500:intron 30.0%
TGATGAAACAACTACATTAG+AGG + chr1_3:4489018-4489037 Msa0098500:CDS 30.0%
! AAGCTTTTCAAAGTTTTTGC+TGG + chr1_3:4489049-4489068 Msa0098500:CDS 30.0%
CGATAATCTTCAAAAGTAAG+TGG - chr1_3:4489296-4489315 None:intergenic 30.0%
TTGTGTAAAAGGATATACGA+TGG - chr1_3:4489472-4489491 None:intergenic 30.0%
!! AATTCCTTCTGGATTAGTTA+GGG + chr1_3:4489582-4489601 Msa0098500:CDS 30.0%
! CAATTCATGTGGTTGAATTT+TGG + chr1_3:4489664-4489683 Msa0098500:intron 30.0%
AGTTGTTGAGATACATTCAT+AGG + chr1_3:4489751-4489770 Msa0098500:CDS 30.0%
TCTTGTACTCATTTATGATC+AGG + chr1_3:4490044-4490063 Msa0098500:intron 30.0%
TTTGACACTTTGATATGTGA+TGG + chr1_3:4490165-4490184 Msa0098500:intron 30.0%
! CAGTTCTATCGCATATTTTA+AGG - chr1_3:4490263-4490282 None:intergenic 30.0%
TGTGTCTTAACAAGCAAATT+TGG + chr1_3:4490290-4490309 Msa0098500:intron 30.0%
AAGAGAAAACAACACATTTG+AGG - chr1_3:4490662-4490681 None:intergenic 30.0%
! AATTTTCATTCCACACATAG+CGG - chr1_3:4490862-4490881 None:intergenic 30.0%
TTCAATGTTAATGTTTCCCT+TGG - chr1_3:4490904-4490923 None:intergenic 30.0%
TAACATTGAAGAGTTGAAGA+AGG + chr1_3:4490914-4490933 Msa0098500:CDS 30.0%
ATCTGCATTTATGGTACAAT+TGG + chr1_3:4490962-4490981 Msa0098500:intron 30.0%
AAGTGTTTCTTTACACCAAT+AGG - chr1_3:4491532-4491551 None:intergenic 30.0%
TATTGGTGTAAAGAAACACT+TGG + chr1_3:4491531-4491550 Msa0098500:CDS 30.0%
!! ATCTTTTGGAAGGATTTCTT+TGG - chr1_3:4491695-4491714 None:intergenic 30.0%
! CATGTAGTTTGCATTCAAAA+TGG - chr1_3:4491930-4491949 None:intergenic 30.0%
! CATTTTGAATGCAAACTACA+TGG + chr1_3:4491928-4491947 Msa0098500:CDS 30.0%
AAGTATACGAGTAAAAACCA+AGG - chr1_3:4492029-4492048 None:intergenic 30.0%
!! GAGTTCATTATTGACTTAAG+AGG + chr1_3:4492109-4492128 Msa0098500:CDS 30.0%
!! TATTGACTTAAGAGGCTTTA+AGG + chr1_3:4492117-4492136 Msa0098500:CDS 30.0%
ATTTATATATGGACCTTCCT+AGG + chr1_3:4492357-4492376 Msa0098500:intron 30.0%
! CTCAGCAATTTCTTTTCTAA+TGG - chr1_3:4492507-4492526 None:intergenic 30.0%
TGTTCACAACAATGTTCTTA+AGG + chr1_3:4492547-4492566 Msa0098500:CDS 30.0%
TTAAGCTATTGATCCAATCA+AGG + chr1_3:4492887-4492906 Msa0098500:intron 30.0%
ATAAACAACATGCTTACCAT+TGG - chr1_3:4493053-4493072 None:intergenic 30.0%
CTTACTCAATAAGCTATTCT+AGG + chr1_3:4493174-4493193 Msa0098500:intron 30.0%
TAAGTCGAAAAAACACTTCA+TGG + chr1_3:4493249-4493268 Msa0098500:intron 30.0%
TAGCTTACATATAGTGAATG+AGG - chr1_3:4493380-4493399 None:intergenic 30.0%
GTAGTTCATAAAACAATGTG+TGG + chr1_3:4493406-4493425 Msa0098500:intron 30.0%
TCTTAAGCATGTCTACTTAT+CGG + chr1_3:4493627-4493646 Msa0098500:intron 30.0%
TGTGCTATGGAAAACAAAAA+AGG - chr1_3:4493758-4493777 None:intergenic 30.0%
ACAACTGAATAATGCCAATA+GGG + chr1_3:4493775-4493794 Msa0098500:intron 30.0%
!! AATGGTTATGCACTACTTTT+TGG + chr1_3:4493900-4493919 Msa0098500:intron 30.0%
! AGGAAGATTTTATGTACAAC+TGG - chr1_3:4494112-4494131 None:intergenic 30.0%
!!! TTTTTGTATAATGGGTGAGA+TGG - chr1_3:4494254-4494273 None:intergenic 30.0%
TGTGTATCGAAAAGCTAATA+AGG + chr1_3:4494831-4494850 Msa0098500:three_prime_UTR 30.0%
CTTAGTTGATTATATGGCTA+TGG + chr1_3:4494885-4494904 Msa0098500:three_prime_UTR 30.0%
! AGATGCTATGTTGATGTTTT+AGG + chr1_3:4494932-4494951 Msa0098500:three_prime_UTR 30.0%
AGAACAGAACAGAGGAAAAA+TGG - chr1_3:4486900-4486919 None:intergenic 35.0%
GATGAAGATGAAAATGGAAG+AGG - chr1_3:4487049-4487068 None:intergenic 35.0%
! GAAAACAGAGTTTGAAACAG+AGG - chr1_3:4487083-4487102 None:intergenic 35.0%
! AACTCTGTTTTCAGAAACAG+AGG + chr1_3:4487091-4487110 Msa0098500:CDS 35.0%
TTTCAAAGCTTCAACAGTGA+TGG - chr1_3:4487200-4487219 None:intergenic 35.0%
!!! GCCATTTTTGTTTGTTCTTC+TGG - chr1_3:4487262-4487281 None:intergenic 35.0%
ACAAAAATGGCTGAATCATG+TGG + chr1_3:4487271-4487290 Msa0098500:CDS 35.0%
!! TCCTTCAAACGGATTGATTT+CGG - chr1_3:4487334-4487353 None:intergenic 35.0%
TTTGATGAAGGGTTAACAGA+AGG + chr1_3:4487370-4487389 Msa0098500:CDS 35.0%
!! ATATTTTGGAGAATCCTGCT+TGG + chr1_3:4487500-4487519 Msa0098500:CDS 35.0%
! AGCAATGAAGCATTTGACAT+AGG - chr1_3:4487622-4487641 None:intergenic 35.0%
AATGCTTCATTGCTTGATGA+AGG + chr1_3:4487628-4487647 Msa0098500:CDS 35.0%
ATATGTAAGACAAGAGCTGA+TGG + chr1_3:4487751-4487770 Msa0098500:CDS 35.0%
TGTTATGGCAAGTGATCTAT+TGG + chr1_3:4487927-4487946 Msa0098500:CDS 35.0%
! TTTGGAGCTGATATTGTTGT+TGG + chr1_3:4487979-4487998 Msa0098500:CDS 35.0%
! CTACTTCACAAGAGTATAAG+AGG + chr1_3:4488061-4488080 Msa0098500:CDS 35.0%
CTCAGGTAACTTAGCTTATT+TGG + chr1_3:4488208-4488227 Msa0098500:intron 35.0%
CAAAAGGTCTGAATACAATC+TGG - chr1_3:4488402-4488421 None:intergenic 35.0%
TACACAAAAGGGGTTTCAAA+AGG - chr1_3:4488418-4488437 None:intergenic 35.0%
! GGTGTATTTCTACACAAAAG+GGG - chr1_3:4488428-4488447 None:intergenic 35.0%
!! GTATTGACTAATCTCAGTTG+AGG - chr1_3:4488469-4488488 None:intergenic 35.0%
!!! GATTCTGGTTGGTTTTGTTT+AGG + chr1_3:4488631-4488650 Msa0098500:intron 35.0%
TCCATGATATACAGCATACA+TGG - chr1_3:4488678-4488697 None:intergenic 35.0%
CCTTAAAGCTATTGCACAAA+GGG + chr1_3:4488706-4488725 Msa0098500:CDS 35.0%
ACTAAAGAAACTTGGAACAG+TGG + chr1_3:4488760-4488779 Msa0098500:CDS 35.0%
! CTTTTCAAAGTTTTTGCTGG+TGG + chr1_3:4489052-4489071 Msa0098500:CDS 35.0%
TATGTTAGTCCATCCTCTAT+TGG - chr1_3:4489332-4489351 None:intergenic 35.0%
!! GGAATTGCATTCTGAAATTC+TGG - chr1_3:4489568-4489587 None:intergenic 35.0%
TTTCAGAATGCAATTCCTTC+TGG + chr1_3:4489571-4489590 Msa0098500:CDS 35.0%
!! CAATTCCTTCTGGATTAGTT+AGG + chr1_3:4489581-4489600 Msa0098500:CDS 35.0%
AAGATAGGGTGTGTCAAATA+AGG - chr1_3:4489613-4489632 None:intergenic 35.0%
GACAGTTAATATGAGACGAA+GGG - chr1_3:4489938-4489957 None:intergenic 35.0%
AGACAGTTAATATGAGACGA+AGG - chr1_3:4489939-4489958 None:intergenic 35.0%
! TAACAAGCAAATTTGGTTCC+AGG + chr1_3:4490297-4490316 Msa0098500:intron 35.0%
CAGGAAATGTTCGACAATTT+GGG + chr1_3:4490316-4490335 Msa0098500:intron 35.0%
ACCATACCATATGATATGCA+CGG - chr1_3:4490432-4490451 None:intergenic 35.0%
! AAAAGAAACTCCTGATTTGC+AGG + chr1_3:4490567-4490586 Msa0098500:intron 35.0%
TATGTAATAGCCTGCAAATC+AGG - chr1_3:4490580-4490599 None:intergenic 35.0%
!! AAAGAAGTAAGAAGCATCAC+AGG - chr1_3:4490750-4490769 None:intergenic 35.0%
! GTGATGCTTCTTACTTCTTT+TGG + chr1_3:4490750-4490769 Msa0098500:intron 35.0%
TATGTGAAACTGTAGTCAAG+AGG + chr1_3:4490774-4490793 Msa0098500:intron 35.0%
GGAATGAAAATTGTCACCAT+AGG + chr1_3:4490870-4490889 Msa0098500:CDS 35.0%
GGACAACTTATCTGCATTTA+TGG + chr1_3:4490953-4490972 Msa0098500:CDS 35.0%
GTTACATATCCTTCAACTCA+CGG + chr1_3:4491088-4491107 Msa0098500:CDS 35.0%
TGCAAGATCATCCATGATAA+TGG + chr1_3:4491139-4491158 Msa0098500:CDS 35.0%
!! AAGATCATCCATGATAATGG+AGG + chr1_3:4491142-4491161 Msa0098500:CDS 35.0%
TCTGGAAAGGATAGTACTTA+GGG + chr1_3:4491256-4491275 Msa0098500:intron 35.0%
!!! TCATTTTGGTTTAAGTCCTC+TGG + chr1_3:4491337-4491356 Msa0098500:intron 35.0%
TTCTTAGAGGAAAGAGATTG+TGG + chr1_3:4491360-4491379 Msa0098500:intron 35.0%
! AGTTAAGCTGTATTGACACT+TGG + chr1_3:4491391-4491410 Msa0098500:intron 35.0%
! AAGACATTTTGCATTCCTCA+TGG + chr1_3:4491484-4491503 Msa0098500:CDS 35.0%
! TGCTTTTACTACTTACCACA+GGG - chr1_3:4491576-4491595 None:intergenic 35.0%
GCTATGTATGTGTAAGAGAT+AGG - chr1_3:4491866-4491885 None:intergenic 35.0%
TTACACATACATAGCCATGA+TGG + chr1_3:4491871-4491890 Msa0098500:CDS 35.0%
TACACATACATAGCCATGAT+GGG + chr1_3:4491872-4491891 Msa0098500:CDS 35.0%
GTGTCATATATGATGAACCT+TGG + chr1_3:4492009-4492028 Msa0098500:intron 35.0%
ACTTCTGTAGAGTTATTACC+CGG + chr1_3:4492051-4492070 Msa0098500:intron 35.0%
TTTCCATTGTAGAATACTGC+TGG + chr1_3:4492217-4492236 Msa0098500:intron 35.0%
TTCCATTGTAGAATACTGCT+GGG + chr1_3:4492218-4492237 Msa0098500:intron 35.0%
ATTCAACTAAACATCGTTGC+AGG + chr1_3:4492448-4492467 Msa0098500:intron 35.0%
GAAATTGCTGAGATTGAGAA+AGG + chr1_3:4492515-4492534 Msa0098500:CDS 35.0%
!!! AACTTGTTTTAGGGCTTGTT+TGG + chr1_3:4492633-4492652 Msa0098500:intron 35.0%
TACACTATTAAGGCCTTGAT+TGG - chr1_3:4492903-4492922 None:intergenic 35.0%
AGCTATGAGAACAATGTCAA+GGG - chr1_3:4493097-4493116 None:intergenic 35.0%
TAGCTATGAGAACAATGTCA+AGG - chr1_3:4493098-4493117 None:intergenic 35.0%
! TCAATAAGCTATTCTAGGGA+AGG + chr1_3:4493179-4493198 Msa0098500:intron 35.0%
! CAATAAGCTATTCTAGGGAA+GGG + chr1_3:4493180-4493199 Msa0098500:intron 35.0%
! AGAATGCAATGATTGGTTAG+TGG + chr1_3:4493482-4493501 Msa0098500:intron 35.0%
CACAACTGAATAATGCCAAT+AGG + chr1_3:4493774-4493793 Msa0098500:intron 35.0%
CAACTGAATAATGCCAATAG+GGG + chr1_3:4493776-4493795 Msa0098500:intron 35.0%
! ATTTCAAGTATGTAGGCCAT+AGG + chr1_3:4493824-4493843 Msa0098500:intron 35.0%
! TTTCAAGTATGTAGGCCATA+GGG + chr1_3:4493825-4493844 Msa0098500:intron 35.0%
!! TTTTGTTTGACTGCCTGTAA+TGG + chr1_3:4493882-4493901 Msa0098500:intron 35.0%
AAGTAGTGCATAACCATTAC+AGG - chr1_3:4493898-4493917 None:intergenic 35.0%
GGAATAACACTATTATGCTG+TGG - chr1_3:4494071-4494090 None:intergenic 35.0%
AGCAAAAGTTAATAGCTGCA+GGG - chr1_3:4494149-4494168 None:intergenic 35.0%
AAGCAAAAGTTAATAGCTGC+AGG - chr1_3:4494150-4494169 None:intergenic 35.0%
ATGAAACTTAAGAAGAGCAG+TGG - chr1_3:4494196-4494215 None:intergenic 35.0%
!! GCTGCTGCTATTTGAATTTT+AGG + chr1_3:4494303-4494322 Msa0098500:three_prime_UTR 35.0%
!! TTCTGGTTCTGTTTCTGTTT+CGG + chr1_3:4494503-4494522 Msa0098500:three_prime_UTR 35.0%
GTCTTCTTCCTAATGCAAAA+GGG + chr1_3:4494571-4494590 Msa0098500:three_prime_UTR 35.0%
! ATATGTGTTGGTATAGCAAG+TGG - chr1_3:4494621-4494640 None:intergenic 35.0%
TTTAAAGGTTGAGCTTCACT+TGG + chr1_3:4494697-4494716 Msa0098500:three_prime_UTR 35.0%
CGAAAAGCTAATAAGGTTAC+TGG + chr1_3:4494838-4494857 Msa0098500:three_prime_UTR 35.0%
AAAGCTAATAAGGTTACTGG+TGG + chr1_3:4494841-4494860 Msa0098500:three_prime_UTR 35.0%
TACTGGTGGTTTAACAATGT+TGG + chr1_3:4494855-4494874 Msa0098500:three_prime_UTR 35.0%
ACTGGTGGTTTAACAATGTT+GGG + chr1_3:4494856-4494875 Msa0098500:three_prime_UTR 35.0%
ATCTTCCTAACTGGAGAATA+GGG - chr1_3:4494916-4494935 None:intergenic 35.0%
TTTGGTATGATAACCATGGT+GGG - chr1_3:4495120-4495139 None:intergenic 35.0%
CTAGTTTATGCTAACATTGG+AGG - chr1_3:4495145-4495164 None:intergenic 35.0%
! GCTCTAGTTTATGCTAACAT+TGG - chr1_3:4495148-4495167 None:intergenic 35.0%
TAGCATAAACTAGAGCCATA+TGG + chr1_3:4495152-4495171 Msa0098500:three_prime_UTR 35.0%
AGCATAAACTAGAGCCATAT+GGG + chr1_3:4495153-4495172 Msa0098500:three_prime_UTR 35.0%
GAAGTGTGTGTATGAGTGAA+GGG - chr1_3:4486818-4486837 None:intergenic 40.0%
TGAAGTGTGTGTATGAGTGA+AGG - chr1_3:4486819-4486838 None:intergenic 40.0%
CACTCATACACACACTTCAA+TGG + chr1_3:4486820-4486839 Msa0098500:five_prime_UTR 40.0%
GGAAAAACAGAACAGAACAG+AGG - chr1_3:4486908-4486927 None:intergenic 40.0%
TCCTCTGTAACAGCATTCAA+TGG + chr1_3:4486925-4486944 Msa0098500:exon 40.0%
TCCATTGAATGCTGTTACAG+AGG - chr1_3:4486929-4486948 None:intergenic 40.0%
! TCTGAAACGTCTTCTTTCAG+AGG + chr1_3:4486979-4486998 Msa0098500:CDS 40.0%
AGAAACAGCAATGTTTCACG+TGG + chr1_3:4487130-4487149 Msa0098500:CDS 40.0%
TCCGAAATCAATCCGTTTGA+AGG + chr1_3:4487330-4487349 Msa0098500:CDS 40.0%
ATATTCCTCAAGATCACTGG+TGG - chr1_3:4487484-4487503 None:intergenic 40.0%
GTATACTGAGTATACCAAGC+AGG - chr1_3:4487517-4487536 None:intergenic 40.0%
TGCGAAATCTCAGCTTGATA+AGG - chr1_3:4487541-4487560 None:intergenic 40.0%
TATCAAGCTGAGATTTCGCA+AGG + chr1_3:4487541-4487560 Msa0098500:CDS 40.0%
ACCTTGATTACTGATCTCAC+TGG + chr1_3:4487592-4487611 Msa0098500:CDS 40.0%
ACCAGTGAGATCAGTAATCA+AGG - chr1_3:4487596-4487615 None:intergenic 40.0%
!! AGCTGATGGATTTGAGCTTA+AGG + chr1_3:4487765-4487784 Msa0098500:CDS 40.0%
TGGATTTGAGCTTAAGGTTG+TGG + chr1_3:4487771-4487790 Msa0098500:CDS 40.0%
GGTTGTGGTGAAAGATCTTA+AGG + chr1_3:4487786-4487805 Msa0098500:CDS 40.0%
TACAAATCCGGTGATGTTTG+TGG + chr1_3:4487817-4487836 Msa0098500:CDS 40.0%
AAGAACACCACAAACATCAC+CGG - chr1_3:4487827-4487846 None:intergenic 40.0%
!!! GAAGGTGAGGTTTTGGATTA+TGG + chr1_3:4487865-4487884 Msa0098500:CDS 40.0%
TAAGAAGGCTCATGCTAATG+AGG + chr1_3:4487897-4487916 Msa0098500:CDS 40.0%
!! TCAGAGATTTGGTGTTCCAA+TGG + chr1_3:4488008-4488027 Msa0098500:CDS 40.0%
!! CAGAGATTTGGTGTTCCAAT+GGG + chr1_3:4488009-4488028 Msa0098500:CDS 40.0%
!! TTTGGTGTTCCAATGGGTTA+TGG + chr1_3:4488015-4488034 Msa0098500:CDS 40.0%
ATGATGCCTGGAAGAATCAT+TGG + chr1_3:4488084-4488103 Msa0098500:CDS 40.0%
CTAACACCAATGATTCTTCC+AGG - chr1_3:4488093-4488112 None:intergenic 40.0%
!! GGTGTTAGTGTTGATTCTTC+TGG + chr1_3:4488105-4488124 Msa0098500:CDS 40.0%
CGGCCACATAAGTGATTTAA+AGG - chr1_3:4488318-4488337 None:intergenic 40.0%
ATCTCAGTTGAGGATCTGAT+TGG - chr1_3:4488459-4488478 None:intergenic 40.0%
TAGTCAATACTAAACGGCGA+TGG + chr1_3:4488479-4488498 Msa0098500:intron 40.0%
GCCATGTATGCTGTATATCA+TGG + chr1_3:4488674-4488693 Msa0098500:CDS 40.0%
GCCTTAAAGCTATTGCACAA+AGG + chr1_3:4488705-4488724 Msa0098500:CDS 40.0%
! CCCTTTGTGCAATAGCTTTA+AGG - chr1_3:4488709-4488728 None:intergenic 40.0%
!! GCTTTGGGACTAAAGAAACT+TGG + chr1_3:4488752-4488771 Msa0098500:CDS 40.0%
! AATCCTAAATTGGCTCCGTT+TGG + chr1_3:4489091-4489110 Msa0098500:intron 40.0%
TTACCAAACGGAGCCAATTT+AGG - chr1_3:4489097-4489116 None:intergenic 40.0%
AACCTCGTCTACTGAGAAAA+AGG + chr1_3:4489242-4489261 Msa0098500:intron 40.0%
ACCTCGTCTACTGAGAAAAA+GGG + chr1_3:4489243-4489262 Msa0098500:intron 40.0%
!! ACTTTTGAAGATTATCGGGC+CGG + chr1_3:4489299-4489318 Msa0098500:intron 40.0%
GGATATACGATGGCTATGTT+TGG - chr1_3:4489462-4489481 None:intergenic 40.0%
TCATTGTACAGGATCCAAGT+GGG - chr1_3:4489815-4489834 None:intergenic 40.0%
TTCATTGTACAGGATCCAAG+TGG - chr1_3:4489816-4489835 None:intergenic 40.0%
TGCATTCAGCTTCATTGTAC+AGG - chr1_3:4489826-4489845 None:intergenic 40.0%
GGGTGAATATCAGTAAAGCT+AGG - chr1_3:4489876-4489895 None:intergenic 40.0%
GACACTTTGATATGTGATGG+AGG + chr1_3:4490168-4490187 Msa0098500:intron 40.0%
TGATGGAGGAAGTAGTATGA+TGG + chr1_3:4490182-4490201 Msa0098500:intron 40.0%
CCAAATTGTCGAACATTTCC+TGG - chr1_3:4490318-4490337 None:intergenic 40.0%
CCAGGAAATGTTCGACAATT+TGG + chr1_3:4490315-4490334 Msa0098500:intron 40.0%
GAAGGAATCAAATCCAGTGA+TGG - chr1_3:4490356-4490375 None:intergenic 40.0%
AGCATTTGGTTGCAAAGAGA+AGG - chr1_3:4490374-4490393 None:intergenic 40.0%
TTCTCTTTGCAACCAAATGC+TGG + chr1_3:4490373-4490392 Msa0098500:CDS 40.0%
GGTTATCCGTGCATATCATA+TGG + chr1_3:4490423-4490442 Msa0098500:CDS 40.0%
TCCGTGCATATCATATGGTA+TGG + chr1_3:4490428-4490447 Msa0098500:intron 40.0%
CTGGTATAATGCAGACATTG+CGG - chr1_3:4490809-4490828 None:intergenic 40.0%
ATTATACCAGTCTCAGCACA+TGG + chr1_3:4490819-4490838 Msa0098500:CDS 40.0%
! TCATAAACACCGTGAGTTGA+AGG - chr1_3:4491100-4491119 None:intergenic 40.0%
ACTCACGGTGTTTATGAAGA+AGG + chr1_3:4491103-4491122 Msa0098500:CDS 40.0%
ATACTTGGCCTCCATTATCA+TGG - chr1_3:4491153-4491172 None:intergenic 40.0%
TAATGGAGGCCAAGTATACA+TGG + chr1_3:4491156-4491175 Msa0098500:CDS 40.0%
ACAAACCTGTGCATTCATGT+TGG - chr1_3:4491188-4491207 None:intergenic 40.0%
TACTATCCTTTCCAGACTCT+TGG - chr1_3:4491252-4491271 None:intergenic 40.0%
GTCTGGAAAGGATAGTACTT+AGG + chr1_3:4491255-4491274 Msa0098500:intron 40.0%
! TACTTAGGGTAGACTAGTTC+AGG + chr1_3:4491270-4491289 Msa0098500:intron 40.0%
!! TTAAGTCCTCTGGTTCTTAG+AGG + chr1_3:4491347-4491366 Msa0098500:intron 40.0%
GTGTCAATACAGCTTAACTC+AGG - chr1_3:4491390-4491409 None:intergenic 40.0%
! GACACTTGGTTGATGTTTAC+AGG + chr1_3:4491405-4491424 Msa0098500:intron 40.0%
! ACTTGGTTGATGTTTACAGG+TGG + chr1_3:4491408-4491427 Msa0098500:intron 40.0%
! CTTGGTTGATGTTTACAGGT+GGG + chr1_3:4491409-4491428 Msa0098500:intron 40.0%
ATGTCTTGTGGAGATTGAGA+TGG - chr1_3:4491471-4491490 None:intergenic 40.0%
GAGGAATGCAAAATGTCTTG+TGG - chr1_3:4491483-4491502 None:intergenic 40.0%
! ACATTTTGCATTCCTCATGG+AGG + chr1_3:4491487-4491506 Msa0098500:CDS 40.0%
!! CTGCTTTTACTACTTACCAC+AGG - chr1_3:4491577-4491596 None:intergenic 40.0%
! AAGTGGTTGAGCATTTTCAG+GGG - chr1_3:4491801-4491820 None:intergenic 40.0%
! CAAGTGGTTGAGCATTTTCA+GGG - chr1_3:4491802-4491821 None:intergenic 40.0%
AAACTACATGGCGAAACGAT+TGG + chr1_3:4491940-4491959 Msa0098500:CDS 40.0%
ATCCCAGCAGTATTCTACAA+TGG - chr1_3:4492223-4492242 None:intergenic 40.0%
! CTCATGGACTATGGATTTCA+TGG + chr1_3:4492268-4492287 Msa0098500:CDS 40.0%
TTCATGGACCAACAATGTCA+TGG + chr1_3:4492284-4492303 Msa0098500:CDS 40.0%
ACCTTGCTTTCACTTTCAGT+AGG - chr1_3:4492337-4492356 None:intergenic 40.0%
AAGCAAAAGAGACGCAAAGA+AGG - chr1_3:4492398-4492417 None:intergenic 40.0%
TAGTGTACTAAATGTTGCGC+AGG + chr1_3:4492916-4492935 Msa0098500:intron 40.0%
AGTGTACTAAATGTTGCGCA+GGG + chr1_3:4492917-4492936 Msa0098500:intron 40.0%
ATGGACAAAGCCATATTCCA+GGG + chr1_3:4492976-4492995 Msa0098500:CDS 40.0%
TAGGCCAAAACTTTGCAACA+CGG - chr1_3:4493030-4493049 None:intergenic 40.0%
ACAACATGCTTACCATTGGT+AGG - chr1_3:4493049-4493068 None:intergenic 40.0%
! GGGCGTTTGGAATGATTATT+TGG - chr1_3:4493351-4493370 None:intergenic 40.0%
TATAGTGAATGAGGCTACGA+GGG - chr1_3:4493371-4493390 None:intergenic 40.0%
ATATAGTGAATGAGGCTACG+AGG - chr1_3:4493372-4493391 None:intergenic 40.0%
ACACGCAAGAATGCAATGAT+TGG + chr1_3:4493475-4493494 Msa0098500:intron 40.0%
! ATTGGTTAGTGGACAGTGTT+CGG + chr1_3:4493493-4493512 Msa0098500:intron 40.0%
GCATAACAGAATAGTACAGC+AGG - chr1_3:4493559-4493578 None:intergenic 40.0%
ATGCAATGAATTAGGGTCAC+AGG + chr1_3:4493575-4493594 Msa0098500:intron 40.0%
TGCAATGAATTAGGGTCACA+GGG + chr1_3:4493576-4493595 Msa0098500:intron 40.0%
TTTGATAAGGGCCAAAATGG+AGG - chr1_3:4493725-4493744 None:intergenic 40.0%
GTGTTTGATAAGGGCCAAAA+TGG - chr1_3:4493728-4493747 None:intergenic 40.0%
GGCATTATTCAGTTGTGCTA+TGG - chr1_3:4493771-4493790 None:intergenic 40.0%
CTATGATGATATGCCCCTAT+TGG - chr1_3:4493792-4493811 None:intergenic 40.0%
TTCAAGTATGTAGGCCATAG+GGG + chr1_3:4493826-4493845 Msa0098500:intron 40.0%
!! GGACGTGTTGATAATGTGTA+TGG + chr1_3:4493983-4494002 Msa0098500:intron 40.0%
AGATGGATATGAGTTGTGGT+AGG - chr1_3:4494237-4494256 None:intergenic 40.0%
GGTCTTCTTCCTAATGCAAA+AGG + chr1_3:4494570-4494589 Msa0098500:three_prime_UTR 40.0%
!!! TGGACTCGCTTTTTGTGATT+TGG + chr1_3:4494717-4494736 Msa0098500:three_prime_UTR 40.0%
!!! GGACTCGCTTTTTGTGATTT+GGG + chr1_3:4494718-4494737 Msa0098500:three_prime_UTR 40.0%
!!! GACTCGCTTTTTGTGATTTG+GGG + chr1_3:4494719-4494738 Msa0098500:three_prime_UTR 40.0%
! TTTGTGATTTGGGGATTGCA+AGG + chr1_3:4494728-4494747 Msa0098500:three_prime_UTR 40.0%
ATTGCAAGGTGGAAAATGCA+TGG + chr1_3:4494742-4494761 Msa0098500:three_prime_UTR 40.0%
CTGGTGGTTTAACAATGTTG+GGG + chr1_3:4494857-4494876 Msa0098500:three_prime_UTR 40.0%
CATCTTCCTAACTGGAGAAT+AGG - chr1_3:4494917-4494936 None:intergenic 40.0%
CAACATAGCATCTTCCTAAC+TGG - chr1_3:4494925-4494944 None:intergenic 40.0%
TTGGTATGATAACCATGGTG+GGG - chr1_3:4495119-4495138 None:intergenic 40.0%
GTTTGGTATGATAACCATGG+TGG - chr1_3:4495121-4495140 None:intergenic 40.0%
GGTGTTTGGTATGATAACCA+TGG - chr1_3:4495124-4495143 None:intergenic 40.0%
!! ATGCTAACATTGGAGGTGTT+TGG - chr1_3:4495138-4495157 None:intergenic 40.0%
GCATAAACTAGAGCCATATG+GGG + chr1_3:4495154-4495173 Msa0098500:three_prime_UTR 40.0%
GATGATTTCTTGACCCCATA+TGG - chr1_3:4495170-4495189 None:intergenic 40.0%
GAAGACGTTTCAGAGTTGCA+CGG - chr1_3:4486973-4486992 None:intergenic 45.0%
AACAGAGGATCCAACGTGTT+TGG + chr1_3:4487106-4487125 Msa0098500:CDS 45.0%
!! GCTGTTTCTTCCAAACACGT+TGG - chr1_3:4487119-4487138 None:intergenic 45.0%
AGCAATGTTTCACGTGGTGT+TGG + chr1_3:4487136-4487155 Msa0098500:CDS 45.0%
! AATGTTTCACGTGGTGTTGG+TGG + chr1_3:4487139-4487158 Msa0098500:CDS 45.0%
!! TTGGTGGATTTCACGGTTCT+GGG + chr1_3:4487155-4487174 Msa0098500:CDS 45.0%
CGTCTTGCGAATGTATCACT+TGG - chr1_3:4487223-4487242 None:intergenic 45.0%
CTTCTGGTGTAGCTGAGTTA+TGG - chr1_3:4487246-4487265 None:intergenic 45.0%
ATGTTCCACCAGTGATCTTG+AGG + chr1_3:4487476-4487495 Msa0098500:CDS 45.0%
GGTGTTCTTGTTCAGTATCC+TGG + chr1_3:4487838-4487857 Msa0098500:CDS 45.0%
! GTTCAGTATCCTGGTACTGA+AGG + chr1_3:4487847-4487866 Msa0098500:CDS 45.0%
AAAACCTCACCTTCAGTACC+AGG - chr1_3:4487859-4487878 None:intergenic 45.0%
!! TGGTACTGAAGGTGAGGTTT+TGG + chr1_3:4487858-4487877 Msa0098500:CDS 45.0%
GGCTCATGCTAATGAGGTTA+AGG + chr1_3:4487903-4487922 Msa0098500:CDS 45.0%
TTGACTGTGTTGAAACCTCC+TGG + chr1_3:4487952-4487971 Msa0098500:CDS 45.0%
TTGAAACCTCCTGGTGAGTT+TGG + chr1_3:4487961-4487980 Msa0098500:CDS 45.0%
ATATCAGCTCCAAACTCACC+AGG - chr1_3:4487973-4487992 None:intergenic 45.0%
! GTTGGTTCAGCTCAGAGATT+TGG + chr1_3:4487997-4488016 Msa0098500:CDS 45.0%
CTCTTGTGAAGTAGCCAAGA+AGG - chr1_3:4488055-4488074 None:intergenic 45.0%
GAGTATAAGAGGATGATGCC+TGG + chr1_3:4488072-4488091 Msa0098500:CDS 45.0%
TGAGGATGGCTATGCAAACT+CGG + chr1_3:4488139-4488158 Msa0098500:CDS 45.0%
ACAGCATATCCGTAGGGATA+AGG + chr1_3:4488164-4488183 Msa0098500:CDS 45.0%
!! TGCTAGTAGCCTTATCCCTA+CGG - chr1_3:4488176-4488195 None:intergenic 45.0%
TAGCAACATTTGCACTGCTC+AGG + chr1_3:4488191-4488210 Msa0098500:CDS 45.0%
AGGATCTGATTGGACACACA+AGG - chr1_3:4488449-4488468 None:intergenic 45.0%
! TTAGGCACTGCTTGCAAACA+TGG + chr1_3:4488649-4488668 Msa0098500:intron 45.0%
GCTGTATATCATGGACCTGA+AGG + chr1_3:4488683-4488702 Msa0098500:CDS 45.0%
!! GCAATAGCTTTAAGGCCTTC+AGG - chr1_3:4488701-4488720 None:intergenic 45.0%
GCTATTGCACAAAGGGTTCA+TGG + chr1_3:4488713-4488732 Msa0098500:CDS 45.0%
! AAAGGGTTCATGGTCTTGCT+GGG + chr1_3:4488723-4488742 Msa0098500:CDS 45.0%
! TCTTGCTGGGGTATTTGCTT+TGG + chr1_3:4488736-4488755 Msa0098500:CDS 45.0%
! CTTGCTGGGGTATTTGCTTT+GGG + chr1_3:4488737-4488756 Msa0098500:CDS 45.0%
ACTTGGAACAGTGGAAGTTC+AGG + chr1_3:4488769-4488788 Msa0098500:CDS 45.0%
ACAGTGGAAGTTCAGGATCT+TGG + chr1_3:4488776-4488795 Msa0098500:CDS 45.0%
TGGCTTCTTTGACACTGTGA+AGG + chr1_3:4488796-4488815 Msa0098500:CDS 45.0%
AGCAGCATCTGCAATTGCTT+TGG - chr1_3:4488837-4488856 None:intergenic 45.0%
ACTAATTGATATCGGACGGC+TGG + chr1_3:4489139-4489158 Msa0098500:intron 45.0%
GCTTTAGTTGCCTTACCCAT+GGG - chr1_3:4489165-4489184 None:intergenic 45.0%
! TGTTGGTAGGCTTAAAGCGA+TGG - chr1_3:4489187-4489206 None:intergenic 45.0%
TACGATGGCTATGTTTGGCA+AGG - chr1_3:4489457-4489476 None:intergenic 45.0%
GTCTCCCTAACTAATCCAGA+AGG - chr1_3:4489589-4489608 None:intergenic 45.0%
TCAACAACTCGTGCTCAGTT+TGG - chr1_3:4489740-4489759 None:intergenic 45.0%
ATCCAAGTGGGATCATACTG+TGG - chr1_3:4489803-4489822 None:intergenic 45.0%
CTGAAATGATGCCTGTGACA+TGG + chr1_3:4489850-4489869 Msa0098500:CDS 45.0%
! CCTGTTCAGTTGGTGCAAAA+GGG - chr1_3:4489896-4489915 None:intergenic 45.0%
TAACCTTGAGCCTGTTCAGT+TGG - chr1_3:4489906-4489925 None:intergenic 45.0%
ATCCAGTGATGGTACACAAC+AGG - chr1_3:4490345-4490364 None:intergenic 45.0%
TGGAGAATATGCTGGACTCA+TGG + chr1_3:4490402-4490421 Msa0098500:CDS 45.0%
GTATAATGCAGACATTGCGG+TGG - chr1_3:4490806-4490825 None:intergenic 45.0%
ACCATAGGAACTGATGCCAA+GGG + chr1_3:4490885-4490904 Msa0098500:CDS 45.0%
TGGCACCATCCATGTATACT+TGG - chr1_3:4491168-4491187 None:intergenic 45.0%
TTTGTGTTAGGCCAAGAGTC+TGG + chr1_3:4491238-4491257 Msa0098500:intron 45.0%
! CTCTTTCCTCTAAGAACCAG+AGG - chr1_3:4491356-4491375 None:intergenic 45.0%
! TTTTGCATTCCTCATGGAGG+AGG + chr1_3:4491490-4491509 Msa0098500:CDS 45.0%
ACAGGGTGTGAGGGTAAAAA+TGG - chr1_3:4491559-4491578 None:intergenic 45.0%
! ATTTTTACCCTCACACCCTG+TGG + chr1_3:4491558-4491577 Msa0098500:CDS 45.0%
!! GCTATTTTGTGCATTGAGCG+TGG - chr1_3:4491673-4491692 None:intergenic 45.0%
!! GCTATAATGAAGGTGCCAAC+TGG + chr1_3:4491764-4491783 Msa0098500:intron 45.0%
!! ATAATGAAGGTGCCAACTGG+TGG + chr1_3:4491767-4491786 Msa0098500:intron 45.0%
! CCAAGTGGTTGAGCATTTTC+AGG - chr1_3:4491803-4491822 None:intergenic 45.0%
CCTGAAAATGCTCAACCACT+TGG + chr1_3:4491800-4491819 Msa0098500:CDS 45.0%
TAGTATCTCAGCTGCACCTT+GGG + chr1_3:4491823-4491842 Msa0098500:CDS 45.0%
!! ATAGCCATGATGGGTTCCAA+AGG + chr1_3:4491881-4491900 Msa0098500:CDS 45.0%
! TATTACCCGGTTCTTTTCCG+TGG + chr1_3:4492064-4492083 Msa0098500:CDS 45.0%
TTGACTCCACGGAAAAGAAC+CGG - chr1_3:4492073-4492092 None:intergenic 45.0%
! GTTCTTTTCCGTGGAGTCAA+CGG + chr1_3:4492073-4492092 Msa0098500:CDS 45.0%
GCCTACTGAAAGTGAAAGCA+AGG + chr1_3:4492333-4492352 Msa0098500:CDS 45.0%
CATGGACAAAGCCATATTCC+AGG + chr1_3:4492975-4492994 Msa0098500:CDS 45.0%
GCTGCATATTCCCTGGAATA+TGG - chr1_3:4492989-4493008 None:intergenic 45.0%
!! GCAAAGTTTTGGCCTACCAA+TGG + chr1_3:4493034-4493053 Msa0098500:CDS 45.0%
CTAACCTACCTATCATCCCT+TGG + chr1_3:4493115-4493134 Msa0098500:intron 45.0%
CTCAAACACACATCCACCAA+GGG - chr1_3:4493134-4493153 None:intergenic 45.0%
ACTCAAACACACATCCACCA+AGG - chr1_3:4493135-4493154 None:intergenic 45.0%
AGAATAGTACAGCAGGTCTG+TGG - chr1_3:4493552-4493571 None:intergenic 45.0%
ATAAGGGCCAAAATGGAGGT+GGG - chr1_3:4493721-4493740 None:intergenic 45.0%
GCAGGGACTGTATGATGAAT+AGG - chr1_3:4494132-4494151 None:intergenic 45.0%
GGTGAGATGGATATGAGTTG+TGG - chr1_3:4494241-4494260 None:intergenic 45.0%
!! TGGTTCTGTTTCTGTTTCGG+TGG + chr1_3:4494506-4494525 Msa0098500:three_prime_UTR 45.0%
ATTACTGCCTCTTGGTTGGA+TGG + chr1_3:4494531-4494550 Msa0098500:three_prime_UTR 45.0%
AACTCAACCATCCAACCAAG+AGG - chr1_3:4494541-4494560 None:intergenic 45.0%
TCTTGGTTGGATGGTTGAGT+TGG + chr1_3:4494540-4494559 Msa0098500:three_prime_UTR 45.0%
CTTGGTTGGATGGTTGAGTT+GGG + chr1_3:4494541-4494560 Msa0098500:three_prime_UTR 45.0%
TTCCTAATGCAAAAGGGCAG+TGG + chr1_3:4494577-4494596 Msa0098500:three_prime_UTR 45.0%
TCCTAATGCAAAAGGGCAGT+GGG + chr1_3:4494578-4494597 Msa0098500:three_prime_UTR 45.0%
TGCATAATTATGGAGAGCCG+TGG + chr1_3:4494643-4494662 Msa0098500:three_prime_UTR 45.0%
TGCAAGCAACAATGCTACCA+CGG - chr1_3:4494663-4494682 None:intergenic 45.0%
AAGGTGGAAAATGCATGGAG+TGG + chr1_3:4494747-4494766 Msa0098500:three_prime_UTR 45.0%
AGTAGCCCTATTCTCCAGTT+AGG + chr1_3:4494908-4494927 Msa0098500:three_prime_UTR 45.0%
! ATGATAACCATGGTGGGGAA+TGG - chr1_3:4495114-4495133 None:intergenic 45.0%
!!! TTATTTTATTTAATCATTAT+AGG + chr1_3:4489712-4489731 Msa0098500:intron 5.0%
!!! ATTTATTTATTTTTTTATGA+AGG - chr1_3:4495015-4495034 None:intergenic 5.0%
!! CGTGGTGTTGGTGGATTTCA+CGG + chr1_3:4487148-4487167 Msa0098500:CDS 50.0%
!! GTTGGTGGATTTCACGGTTC+TGG + chr1_3:4487154-4487173 Msa0098500:CDS 50.0%
! GTATCCTGGTACTGAAGGTG+AGG + chr1_3:4487852-4487871 Msa0098500:CDS 50.0%
!! GGTGTTCCAATGGGTTATGG+TGG + chr1_3:4488018-4488037 Msa0098500:CDS 50.0%
TGAGGACCACCATAACCCAT+TGG - chr1_3:4488027-4488046 None:intergenic 50.0%
! CTTCTGGAAAGCCAGCTTTG+AGG + chr1_3:4488121-4488140 Msa0098500:CDS 50.0%
!! TGGAAAGCCAGCTTTGAGGA+TGG + chr1_3:4488125-4488144 Msa0098500:CDS 50.0%
TGCATAGCCATCCTCAAAGC+TGG - chr1_3:4488135-4488154 None:intergenic 50.0%
GAGGATGGCTATGCAAACTC+GGG + chr1_3:4488140-4488159 Msa0098500:CDS 50.0%
TCGGGAACAGCATATCCGTA+GGG + chr1_3:4488158-4488177 Msa0098500:CDS 50.0%
! CAAAGGGTTCATGGTCTTGC+TGG + chr1_3:4488722-4488741 Msa0098500:CDS 50.0%
! AAGGGTTCATGGTCTTGCTG+GGG + chr1_3:4488724-4488743 Msa0098500:CDS 50.0%
! GGCTTTAGTTGCCTTACCCA+TGG - chr1_3:4489166-4489185 None:intergenic 50.0%
! GCCCTTTTTCTCAGTAGACG+AGG - chr1_3:4489247-4489266 None:intergenic 50.0%
GTTTGGCAAGGTCAAACAGC+TGG - chr1_3:4489445-4489464 None:intergenic 50.0%
TGCCACAGTATGATCCCACT+TGG + chr1_3:4489798-4489817 Msa0098500:CDS 50.0%
GTAAAGCTAGGCCATGTCAC+AGG - chr1_3:4489864-4489883 None:intergenic 50.0%
! CCCTTTTGCACCAACTGAAC+AGG + chr1_3:4489893-4489912 Msa0098500:CDS 50.0%
! GCCTGTTCAGTTGGTGCAAA+AGG - chr1_3:4489897-4489916 None:intergenic 50.0%
TGAACAGGCTCAAGGTTACC+AGG + chr1_3:4489908-4489927 Msa0098500:CDS 50.0%
!! TATGAGACGAAGGGAGTACC+TGG - chr1_3:4489929-4489948 None:intergenic 50.0%
GACCTGTTGTGTACCATCAC+TGG + chr1_3:4490340-4490359 Msa0098500:CDS 50.0%
TAATGCAGACATTGCGGTGG+TGG - chr1_3:4490803-4490822 None:intergenic 50.0%
TTGGTACCATGTGCTGAGAC+TGG - chr1_3:4490828-4490847 None:intergenic 50.0%
CACCATAGGAACTGATGCCA+AGG + chr1_3:4490884-4490903 Msa0098500:CDS 50.0%
TCCCTTGGCATCAGTTCCTA+TGG - chr1_3:4490889-4490908 None:intergenic 50.0%
GAAGGCTGCTGAAACACACA+AGG + chr1_3:4490932-4490951 Msa0098500:CDS 50.0%
GGAGGCCAAGTATACATGGA+TGG + chr1_3:4491160-4491179 Msa0098500:CDS 50.0%
! TGGTGCCAACATGAATGCAC+AGG + chr1_3:4491180-4491199 Msa0098500:CDS 50.0%
GTTAGGCCAAGAGTCTGGAA+AGG + chr1_3:4491243-4491262 Msa0098500:intron 50.0%
! CTTACAAGCCCAGGTTGGAT+TGG + chr1_3:4491433-4491452 Msa0098500:CDS 50.0%
CATCTGCTCCAATCCAACCT+GGG - chr1_3:4491444-4491463 None:intergenic 50.0%
ACATCTGCTCCAATCCAACC+TGG - chr1_3:4491445-4491464 None:intergenic 50.0%
CTACTTACCACAGGGTGTGA+GGG - chr1_3:4491568-4491587 None:intergenic 50.0%
ACTACTTACCACAGGGTGTG+AGG - chr1_3:4491569-4491588 None:intergenic 50.0%
GCAGCTGAGATACTACCAAG+TGG - chr1_3:4491818-4491837 None:intergenic 50.0%
GTAGTATCTCAGCTGCACCT+TGG + chr1_3:4491822-4491841 Msa0098500:CDS 50.0%
AGTATCTCAGCTGCACCTTG+GGG + chr1_3:4491824-4491843 Msa0098500:CDS 50.0%
!! AATATGAGCGCTGATCCCCA+AGG - chr1_3:4491842-4491861 None:intergenic 50.0%
!! GAGTCCTTTGGAACCCATCA+TGG - chr1_3:4491888-4491907 None:intergenic 50.0%
CTACATGGCGAAACGATTGG+AGG + chr1_3:4491943-4491962 Msa0098500:CDS 50.0%
TGACTCCACGGAAAAGAACC+GGG - chr1_3:4492072-4492091 None:intergenic 50.0%
!! CACATGTTCCGTTGACTCCA+CGG - chr1_3:4492084-4492103 None:intergenic 50.0%
AGACGCTTCGCAACATCTTC+AGG - chr1_3:4492250-4492269 None:intergenic 50.0%
! AGATGTTGCGAAGCGTCTCA+TGG + chr1_3:4492252-4492271 Msa0098500:CDS 50.0%
ATCATGAGTGTACCAGGCAC+AGG - chr1_3:4492310-4492329 None:intergenic 50.0%
GGCTCAATCATGAGTGTACC+AGG - chr1_3:4492316-4492335 None:intergenic 50.0%
AACATCGTTGCAGGCTGAGT+TGG + chr1_3:4492457-4492476 Msa0098500:intron 50.0%
!! ATGAGCAGTGATGGTGGATG+AGG - chr1_3:4492947-4492966 None:intergenic 50.0%
TCATCCACCATCACTGCTCA+TGG + chr1_3:4492946-4492965 Msa0098500:CDS 50.0%
AACTTTGCAACACGGAGCCA+TGG - chr1_3:4493022-4493041 None:intergenic 50.0%
! GGCTCCGTGTTGCAAAGTTT+TGG + chr1_3:4493023-4493042 Msa0098500:CDS 50.0%
ACCTACCTATCATCCCTTGG+TGG + chr1_3:4493118-4493137 Msa0098500:intron 50.0%
TCCACCAAGGGATGATAGGT+AGG - chr1_3:4493122-4493141 None:intergenic 50.0%
CACATCCACCAAGGGATGAT+AGG - chr1_3:4493126-4493145 None:intergenic 50.0%
TCACTCTGCTGTCAGTGACA+CGG - chr1_3:4493529-4493548 None:intergenic 50.0%
TAAGGGCCAAAATGGAGGTG+GGG - chr1_3:4493720-4493739 None:intergenic 50.0%
GATAAGGGCCAAAATGGAGG+TGG - chr1_3:4493722-4493741 None:intergenic 50.0%
CTTCAACAGCCTGTGATGCT+GGG - chr1_3:4494036-4494055 None:intergenic 50.0%
TCTTCAACAGCCTGTGATGC+TGG - chr1_3:4494037-4494056 None:intergenic 50.0%
! TCCACGAGGGTACACTTAGA+CGG - chr1_3:4494481-4494500 None:intergenic 50.0%
GGACATTACTGCCTCTTGGT+TGG + chr1_3:4494527-4494546 Msa0098500:three_prime_UTR 50.0%
!! TTGGATGGTTGAGTTGGGTG+TGG + chr1_3:4494546-4494565 Msa0098500:three_prime_UTR 50.0%
! ACCCACTGCCCTTTTGCATT+AGG - chr1_3:4494582-4494601 None:intergenic 50.0%
! GTGATTTGGGGATTGCAAGG+TGG + chr1_3:4494731-4494750 Msa0098500:three_prime_UTR 50.0%
! AATGCATGGAGTGGAGTGTC+CGG + chr1_3:4494756-4494775 Msa0098500:three_prime_UTR 50.0%
TTAACAAACTCCACCACCCC+CGG - chr1_3:4494778-4494797 None:intergenic 50.0%
TGAAGAACCATTCCCCACCA+TGG + chr1_3:4495104-4495123 Msa0098500:three_prime_UTR 50.0%
TCAGCTCCAAACTCACCAGG+AGG - chr1_3:4487970-4487989 None:intergenic 55.0%
TGGTCCTCATGCTGCCTTCT+TGG + chr1_3:4488038-4488057 Msa0098500:CDS 55.0%
GTAGCCAAGAAGGCAGCATG+AGG - chr1_3:4488045-4488064 None:intergenic 55.0%
CTCGGGAACAGCATATCCGT+AGG + chr1_3:4488157-4488176 Msa0098500:CDS 55.0%
GTCCATCCTCTATTGGCCGA+GGG - chr1_3:4489325-4489344 None:intergenic 55.0%
AGTCCATCCTCTATTGGCCG+AGG - chr1_3:4489326-4489345 None:intergenic 55.0%
GCACCAACTGAACAGGCTCA+AGG + chr1_3:4489900-4489919 Msa0098500:CDS 55.0%
!! CAACCAAATGCTGGTGCTGC+TGG + chr1_3:4490382-4490401 Msa0098500:CDS 55.0%
TCTCCAGCAGCACCAGCATT+TGG - chr1_3:4490388-4490407 None:intergenic 55.0%
!! GGTGCTGCTGGAGAATATGC+TGG + chr1_3:4490394-4490413 Msa0098500:CDS 55.0%
CATAGCGGCACTAGCAGGAT+TGG - chr1_3:4490847-4490866 None:intergenic 55.0%
TGGGACTTACAAGCCCAGGT+TGG + chr1_3:4491428-4491447 Msa0098500:CDS 55.0%
TGCATTCCTCATGGAGGAGG+TGG + chr1_3:4491493-4491512 Msa0098500:CDS 55.0%
CACCAATAGGACCCATGCCA+GGG - chr1_3:4491519-4491538 None:intergenic 55.0%
ACACCAATAGGACCCATGCC+AGG - chr1_3:4491520-4491539 None:intergenic 55.0%
TGACGCGTCAGTGAGTCCTT+TGG - chr1_3:4491900-4491919 None:intergenic 55.0%
! GCGAAGCGTCTCATGGACTA+TGG + chr1_3:4492259-4492278 Msa0098500:CDS 55.0%
GGCACAGGCCATGACATTGT+TGG - chr1_3:4492295-4492314 None:intergenic 55.0%
ACAATGTCATGGCCTGTGCC+TGG + chr1_3:4492295-4492314 Msa0098500:CDS 55.0%
! CGTTGCAGGCTGAGTTGGAT+AGG + chr1_3:4492462-4492481 Msa0098500:intron 55.0%
TCAGCCATGAGCAGTGATGG+TGG - chr1_3:4492953-4492972 None:intergenic 55.0%
GCATCAGCCATGAGCAGTGA+TGG - chr1_3:4492956-4492975 None:intergenic 55.0%
CACTGCTCATGGCTGATGCA+TGG + chr1_3:4492957-4492976 Msa0098500:CDS 55.0%
AGGGAAGGCTGCATATTCCC+TGG - chr1_3:4492996-4493015 None:intergenic 55.0%
!! AATGAGGCTACGAGGGCGTT+TGG - chr1_3:4493364-4493383 None:intergenic 55.0%
CACTCTGCTGTCAGTGACAC+GGG - chr1_3:4493528-4493547 None:intergenic 55.0%
! CATGCACCCCACCTCCATTT+TGG + chr1_3:4493711-4493730 Msa0098500:intron 55.0%
! GAAGGGTGCAGATCAGGTTG+CGG - chr1_3:4494012-4494031 None:intergenic 55.0%
AGCCTGTGATGCTGGGAGAA+GGG - chr1_3:4494029-4494048 None:intergenic 55.0%
GGGTACACTTAGACGGAGGA+AGG - chr1_3:4494474-4494493 None:intergenic 55.0%
! ACGAGGGTACACTTAGACGG+AGG - chr1_3:4494478-4494497 None:intergenic 55.0%
TCCGTCTAAGTGTACCCTCG+TGG + chr1_3:4494477-4494496 Msa0098500:three_prime_UTR 55.0%
GTCTAAGTGTACCCTCGTGG+AGG + chr1_3:4494480-4494499 Msa0098500:three_prime_UTR 55.0%
CAGAACCAGAACCTCCACGA+GGG - chr1_3:4494494-4494513 None:intergenic 55.0%
ACAGAACCAGAACCTCCACG+AGG - chr1_3:4494495-4494514 None:intergenic 55.0%
CGGTGGACATTACTGCCTCT+TGG + chr1_3:4494523-4494542 Msa0098500:three_prime_UTR 55.0%
!! GATGGTTGAGTTGGGTGTGG+TGG + chr1_3:4494549-4494568 Msa0098500:three_prime_UTR 55.0%
! GCAAAAGGGCAGTGGGTTTG+TGG + chr1_3:4494585-4494604 Msa0098500:three_prime_UTR 55.0%
! ATGCATGGAGTGGAGTGTCC+GGG + chr1_3:4494757-4494776 Msa0098500:three_prime_UTR 55.0%
! ATATCGGACGGCTGGCCCAT+GGG + chr1_3:4489147-4489166 Msa0098500:intron 60.0%
AAGATTATCGGGCCGGCCCT+CGG + chr1_3:4489306-4489325 Msa0098500:intron 60.0%
ATCCTCTATTGGCCGAGGGC+CGG - chr1_3:4489321-4489340 None:intergenic 60.0%
CCACACATAGCGGCACTAGC+AGG - chr1_3:4490852-4490871 None:intergenic 60.0%
! CCTGCTAGTGCCGCTATGTG+TGG + chr1_3:4490849-4490868 Msa0098500:CDS 60.0%
CAGGTGGGACTTACAAGCCC+AGG + chr1_3:4491424-4491443 Msa0098500:intron 60.0%
! ATAGTGCGTTGACCCGTGCG+AGG + chr1_3:4491620-4491639 Msa0098500:intron 60.0%
AATCTCACCCGTGCCTCGCA+CGG - chr1_3:4491636-4491655 None:intergenic 60.0%
GAGGCACGGGTGAGATTTGC+AGG + chr1_3:4491639-4491658 Msa0098500:intron 60.0%
ATGCAGCCTTCCCTGCTCCA+TGG + chr1_3:4493002-4493021 Msa0098500:CDS 60.0%
CAACACGGAGCCATGGAGCA+GGG - chr1_3:4493015-4493034 None:intergenic 60.0%
! CTGGGAGAAGGGTGCAGATC+AGG - chr1_3:4494018-4494037 None:intergenic 60.0%
CACCCTTCTCCCAGCATCAC+AGG + chr1_3:4494024-4494043 Msa0098500:CDS 60.0%
CAGCCTGTGATGCTGGGAGA+AGG - chr1_3:4494030-4494049 None:intergenic 60.0%
GTGTACCCTCGTGGAGGTTC+TGG + chr1_3:4494486-4494505 Msa0098500:three_prime_UTR 60.0%
! TGCATGGAGTGGAGTGTCCG+GGG + chr1_3:4494758-4494777 Msa0098500:three_prime_UTR 60.0%
! GATATCGGACGGCTGGCCCA+TGG + chr1_3:4489146-4489165 Msa0098500:intron 65.0%
GGCCCTCGGCCAATAGAGGA+TGG + chr1_3:4489320-4489339 Msa0098500:intron 65.0%
GGCCCTGGCATGGGTCCTAT+TGG + chr1_3:4491514-4491533 Msa0098500:CDS 65.0%
ATCTCACCCGTGCCTCGCAC+GGG - chr1_3:4491635-4491654 None:intergenic 65.0%
ACGGAGCCATGGAGCAGGGA+AGG - chr1_3:4493011-4493030 None:intergenic 65.0%
GCAACACGGAGCCATGGAGC+AGG - chr1_3:4493016-4493035 None:intergenic 65.0%
! GCATGGAGTGGAGTGTCCGG+GGG + chr1_3:4494759-4494778 Msa0098500:three_prime_UTR 65.0%
! GGACGGCTGGCCCATGGGTA+AGG + chr1_3:4489152-4489171 Msa0098500:intron 70.0%
CCAGGGCCACCTCCTCCATG+AGG - chr1_3:4491502-4491521 None:intergenic 70.0%
CCTCATGGAGGAGGTGGCCC+TGG + chr1_3:4491499-4491518 Msa0098500:CDS 70.0%
TGGAGGAGGTGGCCCTGGCA+TGG + chr1_3:4491504-4491523 Msa0098500:CDS 70.0%
GGAGGAGGTGGCCCTGGCAT+GGG + chr1_3:4491505-4491524 Msa0098500:CDS 70.0%
! GCGTTGACCCGTGCGAGGCA+CGG + chr1_3:4491625-4491644 Msa0098500:intron 70.0%
CGTTGACCCGTGCGAGGCAC+GGG + chr1_3:4491626-4491645 Msa0098500:intron 70.0%
! TGGAGTGGAGTGTCCGGGGG+TGG + chr1_3:4494762-4494781 Msa0098500:three_prime_UTR 70.0%
! AGTGGAGTGTCCGGGGGTGG+TGG + chr1_3:4494765-4494784 Msa0098500:three_prime_UTR 70.0%
GGCCGGCCCTCGGCCAATAG+AGG + chr1_3:4489316-4489335 Msa0098500:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 4486796 4495206 4486796 ID=Msa0098500;Name=Msa0098500
chr1_3 mRNA 4486796 4495206 4486796 ID=Msa0098500-mRNA-1;Parent=Msa0098500;Name=Msa0098500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=148|1|1|1|1|1|15|1128|1057
chr1_3 exon 4486796 4488212 4486796 ID=Msa0098500-mRNA-1:exon:1538;Parent=Msa0098500-mRNA-1
chr1_3 exon 4488653 4488898 4488653 ID=Msa0098500-mRNA-1:exon:1539;Parent=Msa0098500-mRNA-1
chr1_3 exon 4489004 4489081 4489004 ID=Msa0098500-mRNA-1:exon:1540;Parent=Msa0098500-mRNA-1
chr1_3 exon 4489538 4489638 4489538 ID=Msa0098500-mRNA-1:exon:1541;Parent=Msa0098500-mRNA-1
chr1_3 exon 4489734 4489929 4489734 ID=Msa0098500-mRNA-1:exon:1542;Parent=Msa0098500-mRNA-1
chr1_3 exon 4490319 4490444 4490319 ID=Msa0098500-mRNA-1:exon:1543;Parent=Msa0098500-mRNA-1
chr1_3 exon 4490789 4490974 4490789 ID=Msa0098500-mRNA-1:exon:1544;Parent=Msa0098500-mRNA-1
chr1_3 exon 4491088 4491201 4491088 ID=Msa0098500-mRNA-1:exon:1545;Parent=Msa0098500-mRNA-1
chr1_3 exon 4491427 4491579 4491427 ID=Msa0098500-mRNA-1:exon:1546;Parent=Msa0098500-mRNA-1
chr1_3 exon 4491776 4491964 4491776 ID=Msa0098500-mRNA-1:exon:1547;Parent=Msa0098500-mRNA-1
chr1_3 exon 4492061 4492138 4492061 ID=Msa0098500-mRNA-1:exon:1548;Parent=Msa0098500-mRNA-1
chr1_3 exon 4492229 4492354 4492229 ID=Msa0098500-mRNA-1:exon:1549;Parent=Msa0098500-mRNA-1
chr1_3 exon 4492470 4492568 4492470 ID=Msa0098500-mRNA-1:exon:1550;Parent=Msa0098500-mRNA-1
chr1_3 exon 4492938 4493055 4492938 ID=Msa0098500-mRNA-1:exon:1551;Parent=Msa0098500-mRNA-1
chr1_3 exon 4493984 4495206 4493984 ID=Msa0098500-mRNA-1:exon:1552;Parent=Msa0098500-mRNA-1
chr1_3 five_prime_UTR 4486796 4486943 4486796 ID=Msa0098500-mRNA-1:five_prime_utr;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4486944 4488212 4486944 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4488653 4488898 4488653 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4489004 4489081 4489004 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4489538 4489638 4489538 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4489734 4489929 4489734 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4490319 4490444 4490319 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4490789 4490974 4490789 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4491088 4491201 4491088 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4491427 4491579 4491427 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4491776 4491964 4491776 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4492061 4492138 4492061 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4492229 4492354 4492229 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4492470 4492568 4492470 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4492938 4493055 4492938 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 CDS 4493984 4494078 4493984 ID=Msa0098500-mRNA-1:cds;Parent=Msa0098500-mRNA-1
chr1_3 three_prime_UTR 4494079 4495206 4494079 ID=Msa0098500-mRNA-1:three_prime_utr;Parent=Msa0098500-mRNA-1
Gene Sequence

>Msa0098500

ATGGAACGTGCAAGAAGACTCGCAAACCGTGCAACTCTGAAACGTCTTCTTTCAGAGGCAAAGCAGAATTGTAAGAACGAATCAACAACAACAACAACAGCACCTCTTCCATTTTCATCTTCATCAAGATATGTTTCCTCTGTTTCAAACTCTGTTTTCAGAAACAGAGGATCCAACGTGTTTGGAAGAAACAGCAATGTTTCACGTGGTGTTGGTGGATTTCACGGTTCTGGGTCTTCAACACAATCTCGATCCATCACTGTTGAAGCTTTGAAACCAAGTGATACATTCGCAAGACGCCATAACTCAGCTACACCAGAAGAACAAACAAAAATGGCTGAATCATGTGGTTTTGATCATCTTGATTCACTTGTTGATGCAACAGTTCCGAAATCAATCCGTTTGAAGGAAATGAAGTTTAACAAGTTTGATGAAGGGTTAACAGAAGGTCAAATGATTGAACACATGAAGGATTTAGCTTCAAAGAATAAGGTTTTCAAATCTTTCATTGGTATGGGATACTATAACACACATGTTCCACCAGTGATCTTGAGGAATATTTTGGAGAATCCTGCTTGGTATACTCAGTATACACCTTATCAAGCTGAGATTTCGCAAGGTCGTCTTGAATCGTTGTTGAATTTTCAAACCTTGATTACTGATCTCACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGTACTGCTGCAGCTGAAGCAATGTCTATGTGTAATAATATTCAAAAGGGTAAGAAGAAGACTTTTATTATTGCTAGTAATTGTCATCCACAGACTATTGATATATGTAAGACAAGAGCTGATGGATTTGAGCTTAAGGTTGTGGTGAAAGATCTTAAGGATATTGATTACAAATCCGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAAGGTGAGGTTTTGGATTATGGTGAGTTTATTAAGAAGGCTCATGCTAATGAGGTTAAGGTTGTTATGGCAAGTGATCTATTGGCATTGACTGTGTTGAAACCTCCTGGTGAGTTTGGAGCTGATATTGTTGTTGGTTCAGCTCAGAGATTTGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTCTTGGCTACTTCACAAGAGTATAAGAGGATGATGCCTGGAAGAATCATTGGTGTTAGTGTTGATTCTTCTGGAAAGCCAGCTTTGAGGATGGCTATGCAAACTCGGGAACAGCATATCCGTAGGGATAAGGCTACTAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTATATCATGGACCTGAAGGCCTTAAAGCTATTGCACAAAGGGTTCATGGTCTTGCTGGGGTATTTGCTTTGGGACTAAAGAAACTTGGAACAGTGGAAGTTCAGGATCTTGGCTTCTTTGACACTGTGAAGGTTAAGACTTCAAATGCCAAAGCAATTGCAGATGCTGCTGTCAAAAGTGAAATCAATTTGAGAGTTGTAGATGGAAACACCATCACTGTTGCTTTTGATGAAACAACTACATTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTCTCATTCACAGCTGCGTCTCTTGCACCAGAATTTCAGAATGCAATTCCTTCTGGATTAGTTAGGGAGACTCCTTATTTGACACACCCTATCTTTAACACGTACCAAACTGAGCACGAGTTGTTGAGATACATTCATAGGCTACAATCAAAAGATCTCTCACTTTGCCACAGTATGATCCCACTTGGATCCTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCTAGCTTTACTGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTACCAGGAAATGTTCGACAATTTGGGTGACCTGTTGTGTACCATCACTGGATTTGATTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATCCGTGCATATCATATGTCAAGAGGTGACCACCACCGCAATGTCTGCATTATACCAGTCTCAGCACATGGTACCAATCCTGCTAGTGCCGCTATGTGTGGAATGAAAATTGTCACCATAGGAACTGATGCCAAGGGAAACATTAACATTGAAGAGTTGAAGAAGGCTGCTGAAACACACAAGGACAACTTATCTGCATTTATGGTTACATATCCTTCAACTCACGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATCATCCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCCTCACACCCTGTGGTGCCAACTGGTGGAATTCCTGCCCCTGAAAATGCTCAACCACTTGGTAGTATCTCAGCTGCACCTTGGGGATCAGCGCTCATATTGCCTATCTCTTACACATACATAGCCATGATGGGTTCCAAAGGACTCACTGACGCGTCAAAGATAGCCATTTTGAATGCAAACTACATGGCGAAACGATTGGAGAGTTATTACCCGGTTCTTTTCCGTGGAGTCAACGGAACATGTGCTCATGAGTTCATTATTGACTTAAGAGGCTTTAAGAATACTGCTGGGATAGAGCCTGAAGATGTTGCGAAGCGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTGCCTGGTACACTCATGATTGAGCCTACTGAAAGTGAAAGCAAGGCTGAGTTGGATAGGTTTTGTGATGCTCTCATTTCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAATGCTGATGTTCACAACAATGTTCTTAAGGGAGCTCCTCATCCACCATCACTGCTCATGGCTGATGCATGGACAAAGCCATATTCCAGGGAATATGCAGCCTTCCCTGCTCCATGGCTCCGTGTTGCAAAGTTTTGGCCTACCAATGGACGTGTTGATAATGTGTATGGTGACCGCAACCTGATCTGCACCCTTCTCCCAGCATCACAGGCTGTTGAAGAACAAGCTGCTGCCACAGCATAA
Protein sequence

>Msa0098500

MERARRLANRATLKRLLSEAKQNCKNESTTTTTAPLPFSSSSRYVSSVSNSVFRNRGSNVFGRNSNVSRGVGGFHGSGSSTQSRSITVEALKPSDTFARRHNSATPEEQTKMAESCGFDHLDSLVDATVPKSIRLKEMKFNKFDEGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNILENPAWYTQYTPYQAEISQGRLESLLNFQTLITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVKDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGTVEVQDLGFFDTVKVKTSNAKAIADAAVKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEFQNAIPSGLVRETPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIEELKKAAETHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENAQPLGSISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAPWLRVAKFWPTNGRVDNVYGDRNLICTLLPASQAVEEQAAATA*