AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1123490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123490 MtrunA17_Chr7g0262841 95.280 572 27 0 242 813 8 579 0.0 1139
Msa1123490 MtrunA17_Chr2g0327991 39.191 791 458 7 14 797 50 824 0.0 544
Msa1123490 MtrunA17_Chr7g0262831 98.919 185 2 0 1 185 1 185 9.62e-125 372
Msa1123490 MtrunA17_Chr7g0244781 95.370 108 5 0 61 168 17 124 2.27e-62 208
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123490 AT3G09450.1 39.059 786 439 15 18 786 9 771 1.07e-170 512
Msa1123490 AT2G28780.1 36.005 811 480 12 14 811 10 794 1.02e-163 495

Find 170 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAAGATTTGTGGATTTA+AGG 0.118879 7_3:+74366469 Msa1123490:CDS
CTGAAATGGAGCCAAATTTC+TGG 0.203476 7_3:+74366895 Msa1123490:CDS
AATTTAATGTAACCCTTTAT+AGG 0.227954 7_3:-74363033 None:intergenic
AAATCTTGCAGTTTCTCTTC+TGG 0.237975 7_3:-74365850 None:intergenic
AAATAAAAGAACTACTTATA+TGG 0.256780 7_3:+74367423 Msa1123490:CDS
CGTCAACAAGTGTGTCGATT+TGG 0.272339 7_3:-74363265 None:intergenic
GCAATGTCCATCCCTCTTAT+TGG 0.275470 7_3:-74365880 None:intergenic
TTGAAGTTTGTTTGACTTGC+GGG 0.279387 7_3:-74367452 None:intergenic
TATAGTACCCCGACTCAATT+TGG 0.282417 7_3:+74366612 Msa1123490:CDS
ATATAGCCCTCAACCTATAA+AGG 0.287495 7_3:+74363020 Msa1123490:CDS
ACCTTAAATCCACAAATCTT+TGG 0.287928 7_3:-74366470 None:intergenic
AGTAGAATGTATGGGGAATC+TGG 0.291832 7_3:+74366540 Msa1123490:CDS
AATCTTGCAGTTTCTCTTCT+GGG 0.294105 7_3:-74365849 None:intergenic
AATGGTACGAACCAGAAATT+TGG 0.300415 7_3:-74366906 None:intergenic
TTATAGGTTGAGGGCTATAT+AGG 0.300994 7_3:-74363017 None:intergenic
AGAAGAGAAACTGCAAGATT+TGG 0.304292 7_3:+74365852 Msa1123490:CDS
GGGCAATTTCGACAGTTATA+GGG 0.304373 7_3:+74366562 Msa1123490:CDS
ATCTCAATGCAGACACATTT+AGG 0.311938 7_3:+74367213 Msa1123490:CDS
GGGGCAATTTCGACAGTTAT+AGG 0.317765 7_3:+74366561 Msa1123490:CDS
AGATACAATGTACATGTAAT+TGG 0.336823 7_3:-74367570 None:intergenic
ATGATAGGGATAATGCATAT+TGG 0.349199 7_3:+74366325 Msa1123490:CDS
TGGAGCTATAGCTTCTGTTC+TGG 0.352610 7_3:+74363398 Msa1123490:CDS
GAACAAAACATTTAGCTTGC+TGG 0.368168 7_3:-74365999 None:intergenic
CAAACGCTCGCTGAGCTTGT+TGG 0.371401 7_3:-74366214 None:intergenic
CATACAGTTGCCGAAGTTAT+CGG 0.375339 7_3:-74363199 None:intergenic
TCCTGTTGTGGAGAGGTACT+TGG 0.379008 7_3:-74365612 None:intergenic
GTCAACAAGTGTGTCGATTT+GGG 0.380204 7_3:-74363264 None:intergenic
AAGCATCTCCTCATCTTTGT+TGG 0.382037 7_3:-74367318 None:intergenic
CAATCTGCTTAATGCAATCT+TGG 0.385334 7_3:-74366758 None:intergenic
CCAGTGTAGTTGTGATACTA+TGG 0.386508 7_3:-74365646 None:intergenic
GCTAGAGTTGCAGCTCTTGA+GGG 0.389237 7_3:-74366702 None:intergenic
TCCTTGGTTTGATATATGAT+AGG 0.391420 7_3:+74366310 Msa1123490:CDS
ACCTTAGCATGCAGCATAGT+TGG 0.394869 7_3:+74362985 Msa1123490:CDS
CTGTATGGCTGCGCTGGCAG+TGG 0.396194 7_3:+74363215 Msa1123490:CDS
TTTAAGTCCTCTCTGTCATT+AGG 0.398749 7_3:+74366276 Msa1123490:CDS
TTAGGCTTTGCCGTGTTCCT+TGG 0.401857 7_3:+74366294 Msa1123490:CDS
CTCAGGCAAAGTAGAATGTA+TGG 0.402439 7_3:+74366531 Msa1123490:CDS
TGATAGGGATAATGCATATT+GGG 0.402750 7_3:+74366326 Msa1123490:CDS
TATAGGTTGAGGGCTATATA+GGG 0.405330 7_3:-74363016 None:intergenic
ATGTAACCCTTTATAGGTTG+AGG 0.416760 7_3:-74363027 None:intergenic
ATTTACAGCAGAAGCTGAAA+TGG 0.417428 7_3:+74366881 Msa1123490:CDS
GTGACGCCGTTAGAGGTTGT+TGG 0.421688 7_3:+74363112 Msa1123490:CDS
ACCACCTTCTTTAAAATGTC+AGG 0.424833 7_3:+74362895 Msa1123490:exon
ACACTTGGTGACGCCGTTAG+AGG 0.424878 7_3:+74363105 Msa1123490:CDS
TATTTCTCTCATCAAGCTAC+TGG 0.426451 7_3:-74367384 None:intergenic
AAAGATCAAGCTTTGGTGGC+TGG 0.427921 7_3:-74366250 None:intergenic
TCCTCATCAATAACACCAAC+AGG 0.430311 7_3:-74365925 None:intergenic
GTTGCAAACGCACGAGGAAC+AGG 0.431175 7_3:+74366402 Msa1123490:CDS
ATACAGTTGCCGAAGTTATC+GGG 0.436138 7_3:-74363198 None:intergenic
TGCTAGAGTTGCAGCTCTTG+AGG 0.437675 7_3:-74366703 None:intergenic
CGACACACTTGTTGACGAAA+AGG 0.437706 7_3:+74363271 Msa1123490:CDS
GCCAAGTACCTCTCCACAAC+AGG 0.438296 7_3:+74365611 Msa1123490:CDS
GAGCTTGTTGGAGCTACATT+GGG 0.441738 7_3:-74366202 None:intergenic
GACGACGTATCTCTTTCGTT+AGG 0.445242 7_3:-74366792 None:intergenic
TGCCCCAATATTGAAAAGCT+TGG 0.446043 7_3:+74367103 Msa1123490:CDS
TGAGTTGTGGTTGCATCAAA+AGG 0.447219 7_3:-74366021 None:intergenic
TGTAACCCTTTATAGGTTGA+GGG 0.455045 7_3:-74363026 None:intergenic
CGATAACTTCGGCAACTGTA+TGG 0.455133 7_3:+74363200 Msa1123490:CDS
TGCTGCCCCTGCCCTATCCT+CGG 0.456066 7_3:+74363427 Msa1123490:CDS
AATAAAAGAACTACTTATAT+GGG 0.456542 7_3:+74367424 Msa1123490:CDS
AAGATCAAGCTTTGGTGGCT+GGG 0.457294 7_3:-74366249 None:intergenic
TTGACGAAAAGGATTGCATA+TGG 0.458789 7_3:+74363282 Msa1123490:CDS
CCTTGGTTTGATATATGATA+GGG 0.460011 7_3:+74366311 Msa1123490:CDS
ATAGGGGCCTTGTTGATCCT+TGG 0.460671 7_3:+74366579 Msa1123490:CDS
TAGCAACTCCAAATTGAGTC+GGG 0.464180 7_3:-74366620 None:intergenic
CTGTAGCAGGTAGTATGAAA+TGG 0.464656 7_3:-74366924 None:intergenic
TCAATTTGGAGTTGCTAGAA+TGG 0.465771 7_3:+74366626 Msa1123490:CDS
GTGGCTTGTTCCACTGCACT+TGG 0.469029 7_3:+74363378 Msa1123490:CDS
TAAATGCAAAGATCAAGCTT+TGG 0.470566 7_3:-74366257 None:intergenic
TATAGCCCTCAACCTATAAA+GGG 0.471608 7_3:+74363021 Msa1123490:CDS
GAGTTGGAAATTATTGTTTG+AGG 0.472419 7_3:-74365814 None:intergenic
TACCTGCTACAGCAATATGC+TGG 0.475447 7_3:+74366935 Msa1123490:CDS
ACGACGTATCTCTTTCGTTA+GGG 0.475646 7_3:-74366791 None:intergenic
CGGCAACTGTATGGCTGCGC+TGG 0.476765 7_3:+74363209 Msa1123490:CDS
AATGGAGCATGTCTCACAAT+TGG 0.477649 7_3:+74367004 Msa1123490:CDS
TGGGTCAATGCAACAAGAGT+TGG 0.479221 7_3:-74365830 None:intergenic
GAGATTAAATTGCAATATAG+AGG 0.485208 7_3:+74365541 Msa1123490:CDS
GGTTCTTAGCTCTTATACCA+TGG 0.486589 7_3:+74366490 Msa1123490:CDS
GTAGAATGTATGGGGAATCT+GGG 0.489062 7_3:+74366541 Msa1123490:CDS
GATTTGGAAATACCAATAAG+AGG 0.489960 7_3:+74365868 Msa1123490:CDS
CAACATCTAGAGGAAATTGC+TGG 0.490184 7_3:+74367284 Msa1123490:CDS
TGAGCTTGTTGGAGCTACAT+TGG 0.496289 7_3:-74366203 None:intergenic
TGAGTTGTCTGAGGCTGAGA+TGG 0.496938 7_3:-74365564 None:intergenic
AGTGGCTACCGGTGCATTTG+TGG 0.499348 7_3:+74363233 Msa1123490:CDS
ATGCAAAGATCAAGCTTTGG+TGG 0.499399 7_3:-74366254 None:intergenic
ATGTAAGCAAACCGAGGATA+GGG 0.500818 7_3:-74363438 None:intergenic
AAAACAGGATGGCATGCATT+GGG 0.501602 7_3:+74365786 Msa1123490:intron
TATGAGAATTGTTGTGACAT+AGG 0.502472 7_3:-74363067 None:intergenic
AGAATGGCAGAGGCTACAAT+AGG 0.502981 7_3:+74366642 Msa1123490:CDS
GATATTGAACAGAGATGAAG+AGG 0.505008 7_3:+74367235 Msa1123490:CDS
TCCTCGGTTTGCTTACATTG+AGG 0.507319 7_3:+74363443 Msa1123490:CDS
CAGCAATTTCCTCTAGATGT+TGG 0.511945 7_3:-74367283 None:intergenic
TTTGAAGTTTGTTTGACTTG+CGG 0.514256 7_3:-74367453 None:intergenic
TCCCAGCATATTGCTGTAGC+AGG 0.515445 7_3:-74366937 None:intergenic
ACGAGGAACAGGAACAGCTA+TGG 0.522977 7_3:+74366413 Msa1123490:CDS
AATGTAAGCAAACCGAGGAT+AGG 0.523686 7_3:-74363439 None:intergenic
ACAGCTATGGGATCAATCTA+CGG 0.523889 7_3:+74366426 Msa1123490:CDS
CAATTTCCTCTAGATGTTGG+AGG 0.527126 7_3:-74367280 None:intergenic
TGGATGGATATTCAAGGTCA+AGG 0.528602 7_3:+74367047 Msa1123490:CDS
TCAGACAACTCAACTGCTGT+TGG 0.529606 7_3:+74365575 Msa1123490:CDS
TCCTGTTGGTGTTATTGATG+AGG 0.529816 7_3:+74365924 Msa1123490:CDS
TTGTTTCATTTCTTGAGTTG+TGG 0.530301 7_3:-74366034 None:intergenic
ATTGCAATTAGTTTCGTGAC+TGG 0.533410 7_3:+74366360 Msa1123490:CDS
ATGTATTCTCAATGTATAGT+TGG 0.537132 7_3:-74365514 None:intergenic
CTCTTTCCTCCAACATCTAG+AGG 0.537612 7_3:+74367274 Msa1123490:CDS
GTTCTTAGCTCTTATACCAT+GGG 0.540055 7_3:+74366491 Msa1123490:CDS
ATAGGGCAGGGGCAGCAACA+TGG 0.541183 7_3:-74363421 None:intergenic
CGAGGAACAGGAACAGCTAT+GGG 0.541244 7_3:+74366414 Msa1123490:CDS
GAGAAGCTTGGCTCCTGTTG+TGG 0.542438 7_3:-74365624 None:intergenic
TATTCTCAATGTATAGTTGG+TGG 0.542668 7_3:-74365511 None:intergenic
GGCAATTTCGACAGTTATAG+GGG 0.544984 7_3:+74366563 Msa1123490:CDS
TGTGATACTATGGAGAAGCT+TGG 0.546804 7_3:-74365636 None:intergenic
GAGTTGTTTCGAACTCGTCT+TGG 0.547127 7_3:+74362946 Msa1123490:CDS
CTAGAGTTGCAGCTCTTGAG+GGG 0.547420 7_3:-74366701 None:intergenic
GCAATCTTGGAGTGTTCTGA+AGG 0.547626 7_3:-74366745 None:intergenic
TCAGGCAAAGTAGAATGTAT+GGG 0.550366 7_3:+74366532 Msa1123490:CDS
ACCAACTATGCTGCATGCTA+AGG 0.552023 7_3:-74362986 None:intergenic
GTAATTTGGATGGATATTCA+AGG 0.552135 7_3:+74367041 Msa1123490:CDS
ATATGCTGGGATCTCTATCA+AGG 0.556800 7_3:+74366949 Msa1123490:CDS
AAAAGATGGAGTAATTTGGA+TGG 0.561145 7_3:+74367031 Msa1123490:CDS
AAGCAAACCGAGGATAGGGC+AGG 0.561371 7_3:-74363434 None:intergenic
CAGCTATGGGATCAATCTAC+GGG 0.561809 7_3:+74366427 Msa1123490:CDS
AGGGATAATGCATATTGGGC+GGG 0.562602 7_3:+74366330 Msa1123490:CDS
TGGAGTTGCTAGAATGGCAG+AGG 0.563730 7_3:+74366632 Msa1123490:CDS
GGATGGATATTCAAGGTCAA+GGG 0.566079 7_3:+74367048 Msa1123490:CDS
GGGCCTTGTTGATCCTTGGT+AGG 0.569678 7_3:+74366583 Msa1123490:CDS
CTAGCAACTCCAAATTGAGT+CGG 0.575057 7_3:-74366621 None:intergenic
ACCTGCTACAGCAATATGCT+GGG 0.575756 7_3:+74366936 Msa1123490:CDS
CGACGTATCTCTTTCGTTAG+GGG 0.576170 7_3:-74366790 None:intergenic
GTTATACATGGTGCACAAGA+AGG 0.578194 7_3:+74363333 Msa1123490:CDS
GTTGTGACATAGGAAATAGA+TGG 0.579686 7_3:-74363057 None:intergenic
ATTCTCATAGTGTTGTCTGA+TGG 0.580392 7_3:+74363081 Msa1123490:CDS
TAGATTTACTATGTTTGCAG+AGG 0.581958 7_3:-74367497 None:intergenic
AACATGCCAACAACCTCTAA+CGG 0.582906 7_3:-74363118 None:intergenic
TTGAAATAGACAAGTCATCT+CGG 0.590293 7_3:-74366134 None:intergenic
AGCAAACCGAGGATAGGGCA+GGG 0.590590 7_3:-74363433 None:intergenic
GCAAACCGAGGATAGGGCAG+GGG 0.590989 7_3:-74363432 None:intergenic
ATTTGGAAATACCAATAAGA+GGG 0.595637 7_3:+74365869 Msa1123490:CDS
CAGCGCCACCACAAATGCAC+CGG 0.599257 7_3:-74363241 None:intergenic
AGCTATAGCTCCAAGTGCAG+TGG 0.600339 7_3:-74363388 None:intergenic
GGAAATACCAATAAGAGGGA+TGG 0.600471 7_3:+74365873 Msa1123490:CDS
TCTTTCGTTAGGGGTAGTCA+TGG 0.603069 7_3:-74366781 None:intergenic
TGAAGTTTGTTTGACTTGCG+GGG 0.604383 7_3:-74367451 None:intergenic
GCGTTTGCAACTGAGAATGT+TGG 0.613666 7_3:-74366390 None:intergenic
CCCTATCATATATCAAACCA+AGG 0.614752 7_3:-74366311 None:intergenic
ATGGACATTGCTCTATCAAG+TGG 0.617499 7_3:+74365892 Msa1123490:CDS
GTTATACGACCCGATAACTT+CGG 0.617939 7_3:+74363189 Msa1123490:CDS
TACTATAGTTCTTCCTACCA+AGG 0.620979 7_3:-74366596 None:intergenic
CCATAGTATCACAACTACAC+TGG 0.621214 7_3:+74365646 Msa1123490:CDS
TATGTCAGCACAGTTATACA+TGG 0.621877 7_3:+74363321 Msa1123490:CDS
CAGGCAAAGTAGAATGTATG+GGG 0.624002 7_3:+74366533 Msa1123490:CDS
GGCTACCGGTGCATTTGTGG+TGG 0.628149 7_3:+74363236 Msa1123490:CDS
GGCTACGCATTCAATTCATG+TGG 0.631946 7_3:+74363359 Msa1123490:CDS
AACTCTTACCAACAAAGATG+AGG 0.633114 7_3:+74367310 Msa1123490:CDS
TCTTGTGACTCGAGATCGTG+AGG 0.636201 7_3:-74367188 None:intergenic
GCTTGGCTCCTGTTGTGGAG+AGG 0.637405 7_3:-74365619 None:intergenic
ACATGGTGCACAAGAAGGAG+TGG 0.641976 7_3:+74363338 Msa1123490:CDS
TTCTCAGTTGCAAACGCACG+AGG 0.643217 7_3:+74366396 Msa1123490:CDS
GTTATTGATGAGGAGCTAAG+AGG 0.643274 7_3:+74365934 Msa1123490:CDS
AAAGAAGAGAAAATGACCCA+TGG 0.647913 7_3:-74366507 None:intergenic
TAGGGATAATGCATATTGGG+CGG 0.652201 7_3:+74366329 Msa1123490:CDS
ATATATCAAACCAAGGAACA+CGG 0.652287 7_3:-74366304 None:intergenic
AACAGCAGTTGAGTTGTCTG+AGG 0.659969 7_3:-74365573 None:intergenic
GCTGGGATCTCTATCAAGGA+CGG 0.660564 7_3:+74366953 Msa1123490:CDS
CTTCCTACCAAGGATCAACA+AGG 0.665051 7_3:-74366586 None:intergenic
TAGAATGTATGGGGAATCTG+GGG 0.673349 7_3:+74366542 Msa1123490:CDS
AGCAACTCCAAATTGAGTCG+GGG 0.676322 7_3:-74366619 None:intergenic
GTGTTGTCTGATGGAACACT+TGG 0.689623 7_3:+74363090 Msa1123490:CDS
ACCTCAATGTAAGCAAACCG+AGG 0.693462 7_3:-74363444 None:intergenic
GGCAAAGCCTAATGACAGAG+AGG 0.719901 7_3:-74366283 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACACAAAAAAAAAAAAA+AGG - chr7_3:74363880-74363899 None:intergenic 10.0%
!!! AAATAATACCTTTAAAAAAA+GGG + chr7_3:74364286-74364305 Msa1123490:intron 10.0%
!!! TATTTTACAAAAATTAATGA+AGG - chr7_3:74364482-74364501 None:intergenic 10.0%
!!! ATTCATTTTAATGATTAAAT+TGG - chr7_3:74364514-74364533 None:intergenic 10.0%
!! TATATTTAAAAACTTAAATC+TGG + chr7_3:74364615-74364634 Msa1123490:intron 10.0%
!!! TTATAATTTTTTTTTATCAG+AGG + chr7_3:74367592-74367611 Msa1123490:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTTGTTGAAG+TGG + chr7_3:74363531-74363550 Msa1123490:intron 15.0%
!!! AAAAAAAAGTTTTTTTGAAC+AGG - chr7_3:74363684-74363703 None:intergenic 15.0%
!! ATTGAATAAAAATGATCTTA+TGG - chr7_3:74363806-74363825 None:intergenic 15.0%
!!! GAAATAATACCTTTAAAAAA+AGG + chr7_3:74364285-74364304 Msa1123490:intron 15.0%
!!! AATAATACCTTTAAAAAAAG+GGG + chr7_3:74364287-74364306 Msa1123490:intron 15.0%
!!! TAGATTTAATTTGAGAAAAT+AGG + chr7_3:74365125-74365144 Msa1123490:intron 15.0%
!!! TTTTTTATAAAAAAACAGGA+TGG + chr7_3:74365775-74365794 Msa1123490:intron 15.0%
!! AAATAAAAGAACTACTTATA+TGG + chr7_3:74367423-74367442 Msa1123490:CDS 15.0%
!! AATAAAAGAACTACTTATAT+GGG + chr7_3:74367424-74367443 Msa1123490:CDS 15.0%
!!! AAGTATTGATTTTTCATTTT+TGG - chr7_3:74367690-74367709 None:intergenic 15.0%
!! AATTTAATGTAACCCTTTAT+AGG - chr7_3:74363036-74363055 None:intergenic 20.0%
!!! AATCACAATTTAGAATAAAC+AGG + chr7_3:74363576-74363595 Msa1123490:intron 20.0%
!! TTAAAATGAGAAGCTATTTA+CGG + chr7_3:74363772-74363791 Msa1123490:intron 20.0%
!!! ATTATTGCTATTGTTATGAT+CGG + chr7_3:74364155-74364174 Msa1123490:intron 20.0%
!!! ATAATACCTTTAAAAAAAGG+GGG + chr7_3:74364288-74364307 Msa1123490:intron 20.0%
!!! AAAAACTTAAATCTGGAATT+TGG + chr7_3:74364622-74364641 Msa1123490:intron 20.0%
!!! TTAGTTGGATTGTTTTTAAT+CGG - chr7_3:74364830-74364849 None:intergenic 20.0%
!!! AAAATCTTTGTTTTTTTGAC+TGG + chr7_3:74364908-74364927 Msa1123490:intron 20.0%
!! CAATGCCTAATATAATAATT+TGG - chr7_3:74364971-74364990 None:intergenic 20.0%
!! TGTAAATTAAAGGAGTTTAA+TGG - chr7_3:74365307-74365326 None:intergenic 20.0%
!! TAACATTGCATGTAAATTAA+AGG - chr7_3:74365317-74365336 None:intergenic 20.0%
!! CATCCAATAATGTATTATTA+CGG + chr7_3:74365359-74365378 Msa1123490:intron 20.0%
!! AGTATAAAAAGAATGATGTT+GGG - chr7_3:74366101-74366120 None:intergenic 20.0%
! AGAAAAAATCATAACCTGAA+TGG - chr7_3:74363154-74363173 None:intergenic 25.0%
! TTTATGACACTTTCAAAATG+TGG + chr7_3:74364263-74364282 Msa1123490:intron 25.0%
!!! ATTATTCCCCCTTTTTTTAA+AGG - chr7_3:74364297-74364316 None:intergenic 25.0%
! AGGGGGAATAATAATATATT+TGG + chr7_3:74364305-74364324 Msa1123490:intron 25.0%
! TCAATCATAAAGATGTTGAT+TGG - chr7_3:74364370-74364389 None:intergenic 25.0%
! AATTATGTCAATTCAAACGT+TGG - chr7_3:74364574-74364593 None:intergenic 25.0%
! GAATTATTATGCTAAGTGAT+GGG - chr7_3:74364780-74364799 None:intergenic 25.0%
! AGAAACAAATTGACATTAGT+TGG - chr7_3:74364845-74364864 None:intergenic 25.0%
! TTACTTGCATCAAATTATAC+AGG - chr7_3:74364886-74364905 None:intergenic 25.0%
! CGCAACCAAATTATTATATT+AGG + chr7_3:74364963-74364982 Msa1123490:intron 25.0%
! AACTTCTGTAATACTATATG+TGG - chr7_3:74365046-74365065 None:intergenic 25.0%
! ATGCCGTAATAATACATTAT+TGG - chr7_3:74365365-74365384 None:intergenic 25.0%
!! AAAGTGTGCTTTTAATATCT+TGG - chr7_3:74365460-74365479 None:intergenic 25.0%
! ATGTATTCTCAATGTATAGT+TGG - chr7_3:74365517-74365536 None:intergenic 25.0%
! GAGATTAAATTGCAATATAG+AGG + chr7_3:74365541-74365560 Msa1123490:CDS 25.0%
! ATTTGGAAATACCAATAAGA+GGG + chr7_3:74365869-74365888 Msa1123490:CDS 25.0%
! CAGTATAAAAAGAATGATGT+TGG - chr7_3:74366102-74366121 None:intergenic 25.0%
!!! TTTTATTTCACTCTCAATCT+TGG - chr7_3:74367411-74367430 None:intergenic 25.0%
! TCAAAAATGACTCAAATAAG+AGG + chr7_3:74367529-74367548 Msa1123490:three_prime_UTR 25.0%
! AGATACAATGTACATGTAAT+TGG - chr7_3:74367573-74367592 None:intergenic 25.0%
!!! CAAAAGTTAGATTTTAGAGT+TGG - chr7_3:74367661-74367680 None:intergenic 25.0%
! TGAAAAATCAATACTTGATG+TGG + chr7_3:74367694-74367713 Msa1123490:three_prime_UTR 25.0%
!! TGTTCCTGACATTTTAAAGA+AGG - chr7_3:74362902-74362921 None:intergenic 30.0%
CAACAACAATTGCAAAAACA+AGG + chr7_3:74362920-74362939 Msa1123490:CDS 30.0%
TATGAGAATTGTTGTGACAT+AGG - chr7_3:74363070-74363089 None:intergenic 30.0%
! TTTTTGTTGAAGTGGATACA+TGG + chr7_3:74363539-74363558 Msa1123490:intron 30.0%
GAAGCAAATTAAGTGATCTT+AGG + chr7_3:74363630-74363649 Msa1123490:intron 30.0%
! GACTATCAGTTATTTCGATT+GGG - chr7_3:74364109-74364128 None:intergenic 30.0%
! TGACTATCAGTTATTTCGAT+TGG - chr7_3:74364110-74364129 None:intergenic 30.0%
TAATATAGTTCCAAAACTCC+AGG + chr7_3:74364330-74364349 Msa1123490:intron 30.0%
! ACTTAAATCTGGAATTTGGA+TGG + chr7_3:74364626-74364645 Msa1123490:intron 30.0%
GTCTTGTGAAAATGCTTTAT+TGG - chr7_3:74364681-74364700 None:intergenic 30.0%
TGCAAATATACACAAACACT+TGG - chr7_3:74364730-74364749 None:intergenic 30.0%
CGAATTATTATGCTAAGTGA+TGG - chr7_3:74364781-74364800 None:intergenic 30.0%
TATTCTCAATGTATAGTTGG+TGG - chr7_3:74365514-74365533 None:intergenic 30.0%
GAGTTGGAAATTATTGTTTG+AGG - chr7_3:74365817-74365836 None:intergenic 30.0%
GATTTGGAAATACCAATAAG+AGG + chr7_3:74365868-74365887 Msa1123490:CDS 30.0%
! TTGTTTCATTTCTTGAGTTG+TGG - chr7_3:74366037-74366056 None:intergenic 30.0%
TTGAAATAGACAAGTCATCT+CGG - chr7_3:74366137-74366156 None:intergenic 30.0%
TAAATGCAAAGATCAAGCTT+TGG - chr7_3:74366260-74366279 None:intergenic 30.0%
ATATATCAAACCAAGGAACA+CGG - chr7_3:74366307-74366326 None:intergenic 30.0%
! TCCTTGGTTTGATATATGAT+AGG + chr7_3:74366310-74366329 Msa1123490:CDS 30.0%
! CCTTGGTTTGATATATGATA+GGG + chr7_3:74366311-74366330 Msa1123490:CDS 30.0%
ATGATAGGGATAATGCATAT+TGG + chr7_3:74366325-74366344 Msa1123490:CDS 30.0%
TGATAGGGATAATGCATATT+GGG + chr7_3:74366326-74366345 Msa1123490:CDS 30.0%
! CTTCATTTTCCAAAGATTTG+TGG + chr7_3:74366461-74366480 Msa1123490:CDS 30.0%
TCCAAAGATTTGTGGATTTA+AGG + chr7_3:74366469-74366488 Msa1123490:CDS 30.0%
ACCTTAAATCCACAAATCTT+TGG - chr7_3:74366473-74366492 None:intergenic 30.0%
! TCATTTTCTCTTCTTTTCTC+AGG + chr7_3:74366514-74366533 Msa1123490:CDS 30.0%
CACAAAAAGATGGAGTAATT+TGG + chr7_3:74367027-74367046 Msa1123490:CDS 30.0%
AAAAGATGGAGTAATTTGGA+TGG + chr7_3:74367031-74367050 Msa1123490:CDS 30.0%
GTAATTTGGATGGATATTCA+AGG + chr7_3:74367041-74367060 Msa1123490:CDS 30.0%
! TTCCAAGCTTTTCAATATTG+GGG - chr7_3:74367108-74367127 None:intergenic 30.0%
! CTTCCAAGCTTTTCAATATT+GGG - chr7_3:74367109-74367128 None:intergenic 30.0%
! TCTTCCAAGCTTTTCAATAT+TGG - chr7_3:74367110-74367129 None:intergenic 30.0%
!! TTTGAAGTTTGTTTGACTTG+CGG - chr7_3:74367456-74367475 None:intergenic 30.0%
TAGATTTACTATGTTTGCAG+AGG - chr7_3:74367500-74367519 None:intergenic 30.0%
! GATCACTTTGTCTTTTCAAT+TGG - chr7_3:74367639-74367658 None:intergenic 30.0%
!! TTAAAGAAGGTGGTGGTTTT+AGG - chr7_3:74362889-74362908 None:intergenic 35.0%
!! TGACATTTTAAAGAAGGTGG+TGG - chr7_3:74362896-74362915 None:intergenic 35.0%
!! ACCACCTTCTTTAAAATGTC+AGG + chr7_3:74362895-74362914 Msa1123490:exon 35.0%
!! TCCTGACATTTTAAAGAAGG+TGG - chr7_3:74362899-74362918 None:intergenic 35.0%
! TATAGGTTGAGGGCTATATA+GGG - chr7_3:74363019-74363038 None:intergenic 35.0%
! TTATAGGTTGAGGGCTATAT+AGG - chr7_3:74363020-74363039 None:intergenic 35.0%
ATATAGCCCTCAACCTATAA+AGG + chr7_3:74363020-74363039 Msa1123490:CDS 35.0%
TATAGCCCTCAACCTATAAA+GGG + chr7_3:74363021-74363040 Msa1123490:CDS 35.0%
! TGTAACCCTTTATAGGTTGA+GGG - chr7_3:74363029-74363048 None:intergenic 35.0%
ATGTAACCCTTTATAGGTTG+AGG - chr7_3:74363030-74363049 None:intergenic 35.0%
GTTGTGACATAGGAAATAGA+TGG - chr7_3:74363060-74363079 None:intergenic 35.0%
ATTCTCATAGTGTTGTCTGA+TGG + chr7_3:74363081-74363100 Msa1123490:CDS 35.0%
! AGGTTGTTGGCATGTTTTAT+TGG + chr7_3:74363125-74363144 Msa1123490:CDS 35.0%
!! TGTTTTATTGGCAACCATTC+AGG + chr7_3:74363137-74363156 Msa1123490:CDS 35.0%
TTGACGAAAAGGATTGCATA+TGG + chr7_3:74363282-74363301 Msa1123490:CDS 35.0%
TATGTCAGCACAGTTATACA+TGG + chr7_3:74363321-74363340 Msa1123490:CDS 35.0%
! TCAGTTATTTCGATTGGGTA+TGG - chr7_3:74364104-74364123 None:intergenic 35.0%
TGCATGAAGAGAAAGACATT+TGG + chr7_3:74364746-74364765 Msa1123490:intron 35.0%
!!! TTGCACATTGTCTTGTTTTC+AGG + chr7_3:74365478-74365497 Msa1123490:intron 35.0%
TTAGTTTATTCGCAACTGCT+AGG - chr7_3:74365738-74365757 None:intergenic 35.0%
AATCTTGCAGTTTCTCTTCT+GGG - chr7_3:74365852-74365871 None:intergenic 35.0%
AAATCTTGCAGTTTCTCTTC+TGG - chr7_3:74365853-74365872 None:intergenic 35.0%
AGAAGAGAAACTGCAAGATT+TGG + chr7_3:74365852-74365871 Msa1123490:CDS 35.0%
!!! TAGCTTGCTGGTCTAATTTT+TGG - chr7_3:74365990-74366009 None:intergenic 35.0%
!! GAACAAAACATTTAGCTTGC+TGG - chr7_3:74366002-74366021 None:intergenic 35.0%
! GATTTTTGTAGGCTATGGAT+GGG - chr7_3:74366077-74366096 None:intergenic 35.0%
! AGATTTTTGTAGGCTATGGA+TGG - chr7_3:74366078-74366097 None:intergenic 35.0%
! TGATGTTGGGAGATTTTTGT+AGG - chr7_3:74366088-74366107 None:intergenic 35.0%
TTTAAGTCCTCTCTGTCATT+AGG + chr7_3:74366276-74366295 Msa1123490:CDS 35.0%
CCCTATCATATATCAAACCA+AGG - chr7_3:74366314-74366333 None:intergenic 35.0%
! ATTGCAATTAGTTTCGTGAC+TGG + chr7_3:74366360-74366379 Msa1123490:CDS 35.0%
! GTTCTTAGCTCTTATACCAT+GGG + chr7_3:74366491-74366510 Msa1123490:CDS 35.0%
AAAGAAGAGAAAATGACCCA+TGG - chr7_3:74366510-74366529 None:intergenic 35.0%
TCAGGCAAAGTAGAATGTAT+GGG + chr7_3:74366532-74366551 Msa1123490:CDS 35.0%
TACTATAGTTCTTCCTACCA+AGG - chr7_3:74366599-74366618 None:intergenic 35.0%
! TCAATTTGGAGTTGCTAGAA+TGG + chr7_3:74366626-74366645 Msa1123490:CDS 35.0%
CAATCTGCTTAATGCAATCT+TGG - chr7_3:74366761-74366780 None:intergenic 35.0%
ATTTACAGCAGAAGCTGAAA+TGG + chr7_3:74366881-74366900 Msa1123490:CDS 35.0%
AATGGTACGAACCAGAAATT+TGG - chr7_3:74366909-74366928 None:intergenic 35.0%
TCACAATTGGCACAAAAAGA+TGG + chr7_3:74367017-74367036 Msa1123490:CDS 35.0%
ATCTCAATGCAGACACATTT+AGG + chr7_3:74367213-74367232 Msa1123490:CDS 35.0%
GATATTGAACAGAGATGAAG+AGG + chr7_3:74367235-74367254 Msa1123490:CDS 35.0%
AACTCTTACCAACAAAGATG+AGG + chr7_3:74367310-74367329 Msa1123490:CDS 35.0%
!! CTTTTTCATTACAGCTGCTT+CGG + chr7_3:74367353-74367372 Msa1123490:CDS 35.0%
TATTTCTCTCATCAAGCTAC+TGG - chr7_3:74367387-74367406 None:intergenic 35.0%
!! TTGAAGTTTGTTTGACTTGC+GGG - chr7_3:74367455-74367474 None:intergenic 35.0%
AACATGCCAACAACCTCTAA+CGG - chr7_3:74363121-74363140 None:intergenic 40.0%
GTTATACGACCCGATAACTT+CGG + chr7_3:74363189-74363208 Msa1123490:CDS 40.0%
ATACAGTTGCCGAAGTTATC+GGG - chr7_3:74363201-74363220 None:intergenic 40.0%
CATACAGTTGCCGAAGTTAT+CGG - chr7_3:74363202-74363221 None:intergenic 40.0%
!! GTCAACAAGTGTGTCGATTT+GGG - chr7_3:74363267-74363286 None:intergenic 40.0%
GTTATACATGGTGCACAAGA+AGG + chr7_3:74363333-74363352 Msa1123490:CDS 40.0%
ATGTAAGCAAACCGAGGATA+GGG - chr7_3:74363441-74363460 None:intergenic 40.0%
AATGTAAGCAAACCGAGGAT+AGG - chr7_3:74363442-74363461 None:intergenic 40.0%
TTGTTGAAGTGGATACATGG+AGG + chr7_3:74363542-74363561 Msa1123490:intron 40.0%
GCTCATAGTTACCAACATGT+AGG - chr7_3:74364082-74364101 None:intergenic 40.0%
CAAAACTCCAGGAATCGATT+GGG + chr7_3:74364341-74364360 Msa1123490:intron 40.0%
AAAACTCCAGGAATCGATTG+GGG + chr7_3:74364342-74364361 Msa1123490:intron 40.0%
GTCACTATGCATTTGTCACT+TGG + chr7_3:74364435-74364454 Msa1123490:intron 40.0%
GTTACGCAGACATATGAGTT+TGG - chr7_3:74364659-74364678 None:intergenic 40.0%
ACAAACACTTGGAGACAGAT+TGG - chr7_3:74364719-74364738 None:intergenic 40.0%
ACGTCATATCATTGAAGTGG+GGG - chr7_3:74365200-74365219 None:intergenic 40.0%
CACGTCATATCATTGAAGTG+GGG - chr7_3:74365201-74365220 None:intergenic 40.0%
CCACGTCATATCATTGAAGT+GGG - chr7_3:74365202-74365221 None:intergenic 40.0%
TCCACGTCATATCATTGAAG+TGG - chr7_3:74365203-74365222 None:intergenic 40.0%
!!! CATTGTCTTGTTTTCAGGCA+AGG + chr7_3:74365483-74365502 Msa1123490:intron 40.0%
TGTGATACTATGGAGAAGCT+TGG - chr7_3:74365639-74365658 None:intergenic 40.0%
CCAGTGTAGTTGTGATACTA+TGG - chr7_3:74365649-74365668 None:intergenic 40.0%
CCATAGTATCACAACTACAC+TGG + chr7_3:74365646-74365665 Msa1123490:CDS 40.0%
AAAAACAGGATGGCATGCAT+TGG + chr7_3:74365785-74365804 Msa1123490:intron 40.0%
AAAACAGGATGGCATGCATT+GGG + chr7_3:74365786-74365805 Msa1123490:intron 40.0%
GGAAATACCAATAAGAGGGA+TGG + chr7_3:74365873-74365892 Msa1123490:CDS 40.0%
ATGGACATTGCTCTATCAAG+TGG + chr7_3:74365892-74365911 Msa1123490:CDS 40.0%
!! TCCTGTTGGTGTTATTGATG+AGG + chr7_3:74365924-74365943 Msa1123490:CDS 40.0%
TCCTCATCAATAACACCAAC+AGG - chr7_3:74365928-74365947 None:intergenic 40.0%
GTTATTGATGAGGAGCTAAG+AGG + chr7_3:74365934-74365953 Msa1123490:CDS 40.0%
TGAGTTGTGGTTGCATCAAA+AGG - chr7_3:74366024-74366043 None:intergenic 40.0%
! TGGGAGATTTTTGTAGGCTA+TGG - chr7_3:74366082-74366101 None:intergenic 40.0%
!!! TCTGAGCTTTTTTCTGCACA+TGG - chr7_3:74366170-74366189 None:intergenic 40.0%
! ATGCAAAGATCAAGCTTTGG+TGG - chr7_3:74366257-74366276 None:intergenic 40.0%
TAGGGATAATGCATATTGGG+CGG + chr7_3:74366329-74366348 Msa1123490:CDS 40.0%
ACAGCTATGGGATCAATCTA+CGG + chr7_3:74366426-74366445 Msa1123490:CDS 40.0%
! GGTTCTTAGCTCTTATACCA+TGG + chr7_3:74366490-74366509 Msa1123490:CDS 40.0%
CTCAGGCAAAGTAGAATGTA+TGG + chr7_3:74366531-74366550 Msa1123490:CDS 40.0%
CAGGCAAAGTAGAATGTATG+GGG + chr7_3:74366533-74366552 Msa1123490:CDS 40.0%
AGTAGAATGTATGGGGAATC+TGG + chr7_3:74366540-74366559 Msa1123490:CDS 40.0%
GTAGAATGTATGGGGAATCT+GGG + chr7_3:74366541-74366560 Msa1123490:CDS 40.0%
TAGAATGTATGGGGAATCTG+GGG + chr7_3:74366542-74366561 Msa1123490:CDS 40.0%
GGGCAATTTCGACAGTTATA+GGG + chr7_3:74366562-74366581 Msa1123490:CDS 40.0%
GGCAATTTCGACAGTTATAG+GGG + chr7_3:74366563-74366582 Msa1123490:CDS 40.0%
TATAGTACCCCGACTCAATT+TGG + chr7_3:74366612-74366631 Msa1123490:CDS 40.0%
TAGCAACTCCAAATTGAGTC+GGG - chr7_3:74366623-74366642 None:intergenic 40.0%
CTAGCAACTCCAAATTGAGT+CGG - chr7_3:74366624-74366643 None:intergenic 40.0%
ACGACGTATCTCTTTCGTTA+GGG - chr7_3:74366794-74366813 None:intergenic 40.0%
CTGAAATGGAGCCAAATTTC+TGG + chr7_3:74366895-74366914 Msa1123490:CDS 40.0%
CTGTAGCAGGTAGTATGAAA+TGG - chr7_3:74366927-74366946 None:intergenic 40.0%
ATATGCTGGGATCTCTATCA+AGG + chr7_3:74366949-74366968 Msa1123490:CDS 40.0%
!!! GGTAGATCTCTTGCTTTTTG+TGG + chr7_3:74366974-74366993 Msa1123490:CDS 40.0%
! GCTTTTTGTGGCATACTCAA+TGG + chr7_3:74366986-74367005 Msa1123490:CDS 40.0%
AATGGAGCATGTCTCACAAT+TGG + chr7_3:74367004-74367023 Msa1123490:CDS 40.0%
TGGATGGATATTCAAGGTCA+AGG + chr7_3:74367047-74367066 Msa1123490:CDS 40.0%
GGATGGATATTCAAGGTCAA+GGG + chr7_3:74367048-74367067 Msa1123490:CDS 40.0%
TGCCCCAATATTGAAAAGCT+TGG + chr7_3:74367103-74367122 Msa1123490:CDS 40.0%
CAATTTCCTCTAGATGTTGG+AGG - chr7_3:74367283-74367302 None:intergenic 40.0%
CAGCAATTTCCTCTAGATGT+TGG - chr7_3:74367286-74367305 None:intergenic 40.0%
CAACATCTAGAGGAAATTGC+TGG + chr7_3:74367284-74367303 Msa1123490:CDS 40.0%
AAGCATCTCCTCATCTTTGT+TGG - chr7_3:74367321-74367340 None:intergenic 40.0%
!! TGAAGTTTGTTTGACTTGCG+GGG - chr7_3:74367454-74367473 None:intergenic 40.0%
! GAGTTGTTTCGAACTCGTCT+TGG + chr7_3:74362946-74362965 Msa1123490:CDS 45.0%
ACCTTAGCATGCAGCATAGT+TGG + chr7_3:74362985-74363004 Msa1123490:CDS 45.0%
ACCAACTATGCTGCATGCTA+AGG - chr7_3:74362989-74363008 None:intergenic 45.0%
GTGTTGTCTGATGGAACACT+TGG + chr7_3:74363090-74363109 Msa1123490:CDS 45.0%
CGATAACTTCGGCAACTGTA+TGG + chr7_3:74363200-74363219 Msa1123490:CDS 45.0%
!! CGTCAACAAGTGTGTCGATT+TGG - chr7_3:74363268-74363287 None:intergenic 45.0%
! CGACACACTTGTTGACGAAA+AGG + chr7_3:74363271-74363290 Msa1123490:CDS 45.0%
GGCTACGCATTCAATTCATG+TGG + chr7_3:74363359-74363378 Msa1123490:CDS 45.0%
TGGAGCTATAGCTTCTGTTC+TGG + chr7_3:74363398-74363417 Msa1123490:CDS 45.0%
! TCCTCGGTTTGCTTACATTG+AGG + chr7_3:74363443-74363462 Msa1123490:CDS 45.0%
ACCTCAATGTAAGCAAACCG+AGG - chr7_3:74363447-74363466 None:intergenic 45.0%
AAACGACTCTGCCTACATGT+TGG + chr7_3:74364068-74364087 Msa1123490:intron 45.0%
!! CCAATCGATTCCTGGAGTTT+TGG - chr7_3:74364343-74364362 None:intergenic 45.0%
CCAAAACTCCAGGAATCGAT+TGG + chr7_3:74364340-74364359 Msa1123490:intron 45.0%
GCAGACATATGAGTTTGGAC+TGG - chr7_3:74364654-74364673 None:intergenic 45.0%
CGTCATATCATTGAAGTGGG+GGG - chr7_3:74365199-74365218 None:intergenic 45.0%
CCCACTTCAATGATATGACG+TGG + chr7_3:74365199-74365218 Msa1123490:intron 45.0%
! AACAGCAGTTGAGTTGTCTG+AGG - chr7_3:74365576-74365595 None:intergenic 45.0%
TCAGACAACTCAACTGCTGT+TGG + chr7_3:74365575-74365594 Msa1123490:CDS 45.0%
TGGGTCAATGCAACAAGAGT+TGG - chr7_3:74365833-74365852 None:intergenic 45.0%
GCAATGTCCATCCCTCTTAT+TGG - chr7_3:74365883-74365902 None:intergenic 45.0%
! AGTGGCATGTCTTTTCCTGT+TGG + chr7_3:74365910-74365929 Msa1123490:CDS 45.0%
!! GAGCTTGTTGGAGCTACATT+GGG - chr7_3:74366205-74366224 None:intergenic 45.0%
!! TGAGCTTGTTGGAGCTACAT+TGG - chr7_3:74366206-74366225 None:intergenic 45.0%
! AAGATCAAGCTTTGGTGGCT+GGG - chr7_3:74366252-74366271 None:intergenic 45.0%
! AAAGATCAAGCTTTGGTGGC+TGG - chr7_3:74366253-74366272 None:intergenic 45.0%
AGGGATAATGCATATTGGGC+GGG + chr7_3:74366330-74366349 Msa1123490:CDS 45.0%
GCGTTTGCAACTGAGAATGT+TGG - chr7_3:74366393-74366412 None:intergenic 45.0%
CAGCTATGGGATCAATCTAC+GGG + chr7_3:74366427-74366446 Msa1123490:CDS 45.0%
GGGGCAATTTCGACAGTTAT+AGG + chr7_3:74366561-74366580 Msa1123490:CDS 45.0%
CTTCCTACCAAGGATCAACA+AGG - chr7_3:74366589-74366608 None:intergenic 45.0%
AGCAACTCCAAATTGAGTCG+GGG - chr7_3:74366622-74366641 None:intergenic 45.0%
AGAATGGCAGAGGCTACAAT+AGG + chr7_3:74366642-74366661 Msa1123490:CDS 45.0%
! GCAATCTTGGAGTGTTCTGA+AGG - chr7_3:74366748-74366767 None:intergenic 45.0%
TCTTTCGTTAGGGGTAGTCA+TGG - chr7_3:74366784-74366803 None:intergenic 45.0%
CGACGTATCTCTTTCGTTAG+GGG - chr7_3:74366793-74366812 None:intergenic 45.0%
GACGACGTATCTCTTTCGTT+AGG - chr7_3:74366795-74366814 None:intergenic 45.0%
TACCTGCTACAGCAATATGC+TGG + chr7_3:74366935-74366954 Msa1123490:CDS 45.0%
ACCTGCTACAGCAATATGCT+GGG + chr7_3:74366936-74366955 Msa1123490:CDS 45.0%
CTCTTTCCTCCAACATCTAG+AGG + chr7_3:74367274-74367293 Msa1123490:CDS 45.0%
!!! TTTTTTTTTTATAAAAAAAC+AGG + chr7_3:74365771-74365790 Msa1123490:intron 5.0%
ACATGGTGCACAAGAAGGAG+TGG + chr7_3:74363338-74363357 Msa1123490:CDS 50.0%
AGCTATAGCTCCAAGTGCAG+TGG - chr7_3:74363391-74363410 None:intergenic 50.0%
! TTGGATCCCCAATCGATTCC+TGG - chr7_3:74364351-74364370 None:intergenic 50.0%
! TGAGTTGTCTGAGGCTGAGA+TGG - chr7_3:74365567-74365586 None:intergenic 50.0%
!! TCCTGTTGTGGAGAGGTACT+TGG - chr7_3:74365615-74365634 None:intergenic 50.0%
GGCAAAGCCTAATGACAGAG+AGG - chr7_3:74366286-74366305 None:intergenic 50.0%
TTAGGCTTTGCCGTGTTCCT+TGG + chr7_3:74366294-74366313 Msa1123490:CDS 50.0%
TTCTCAGTTGCAAACGCACG+AGG + chr7_3:74366396-74366415 Msa1123490:CDS 50.0%
ACGAGGAACAGGAACAGCTA+TGG + chr7_3:74366413-74366432 Msa1123490:CDS 50.0%
CGAGGAACAGGAACAGCTAT+GGG + chr7_3:74366414-74366433 Msa1123490:CDS 50.0%
!! ATAGGGGCCTTGTTGATCCT+TGG + chr7_3:74366579-74366598 Msa1123490:CDS 50.0%
TGGAGTTGCTAGAATGGCAG+AGG + chr7_3:74366632-74366651 Msa1123490:CDS 50.0%
CTAGAGTTGCAGCTCTTGAG+GGG - chr7_3:74366704-74366723 None:intergenic 50.0%
GCTAGAGTTGCAGCTCTTGA+GGG - chr7_3:74366705-74366724 None:intergenic 50.0%
TGCTAGAGTTGCAGCTCTTG+AGG - chr7_3:74366706-74366725 None:intergenic 50.0%
TCCCAGCATATTGCTGTAGC+AGG - chr7_3:74366940-74366959 None:intergenic 50.0%
GCTGGGATCTCTATCAAGGA+CGG + chr7_3:74366953-74366972 Msa1123490:CDS 50.0%
TCTTGTGACTCGAGATCGTG+AGG - chr7_3:74367191-74367210 None:intergenic 50.0%
!! ACACTTGGTGACGCCGTTAG+AGG + chr7_3:74363105-74363124 Msa1123490:CDS 55.0%
GTGACGCCGTTAGAGGTTGT+TGG + chr7_3:74363112-74363131 Msa1123490:CDS 55.0%
AGTGGCTACCGGTGCATTTG+TGG + chr7_3:74363233-74363252 Msa1123490:CDS 55.0%
!! GTGGCTTGTTCCACTGCACT+TGG + chr7_3:74363378-74363397 Msa1123490:CDS 55.0%
AGCAAACCGAGGATAGGGCA+GGG - chr7_3:74363436-74363455 None:intergenic 55.0%
AAGCAAACCGAGGATAGGGC+AGG - chr7_3:74363437-74363456 None:intergenic 55.0%
CATTGAAGTGGGGGGTAGTG+AGG - chr7_3:74365191-74365210 None:intergenic 55.0%
GCCAAGTACCTCTCCACAAC+AGG + chr7_3:74365611-74365630 Msa1123490:CDS 55.0%
GAGAAGCTTGGCTCCTGTTG+TGG - chr7_3:74365627-74365646 None:intergenic 55.0%
CAAACGCTCGCTGAGCTTGT+TGG - chr7_3:74366217-74366236 None:intergenic 55.0%
GTTGCAAACGCACGAGGAAC+AGG + chr7_3:74366402-74366421 Msa1123490:CDS 55.0%
!! GGGCCTTGTTGATCCTTGGT+AGG + chr7_3:74366583-74366602 Msa1123490:CDS 55.0%
GGCTACCGGTGCATTTGTGG+TGG + chr7_3:74363236-74363255 Msa1123490:CDS 60.0%
CAGCGCCACCACAAATGCAC+CGG - chr7_3:74363244-74363263 None:intergenic 60.0%
ATAGGGCAGGGGCAGCAACA+TGG - chr7_3:74363424-74363443 None:intergenic 60.0%
GCAAACCGAGGATAGGGCAG+GGG - chr7_3:74363435-74363454 None:intergenic 60.0%
GCTTGGCTCCTGTTGTGGAG+AGG - chr7_3:74365622-74365641 None:intergenic 60.0%
CGGCAACTGTATGGCTGCGC+TGG + chr7_3:74363209-74363228 Msa1123490:CDS 65.0%
! CTGTATGGCTGCGCTGGCAG+TGG + chr7_3:74363215-74363234 Msa1123490:CDS 65.0%
TGCTGCCCCTGCCCTATCCT+CGG + chr7_3:74363427-74363446 Msa1123490:CDS 65.0%
! GCTGCGCTGGCAGTGGCTAC+CGG + chr7_3:74363222-74363241 Msa1123490:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 74362874 74367717 74362874 ID=Msa1123490;Name=Msa1123490
chr7_3 mRNA 74362874 74367717 74362874 ID=Msa1123490-mRNA-1;Parent=Msa1123490;Name=Msa1123490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=36|1|1|1|1|1|3|206|813
chr7_3 exon 74362874 74363464 74362874 ID=Msa1123490-mRNA-1:exon:19766;Parent=Msa1123490-mRNA-1
chr7_3 exon 74365500 74365667 74365500 ID=Msa1123490-mRNA-1:exon:19767;Parent=Msa1123490-mRNA-1
chr7_3 exon 74365793 74367717 74365793 ID=Msa1123490-mRNA-1:exon:19768;Parent=Msa1123490-mRNA-1
chr7_3 five_prime_UTR 74362874 74362909 74362874 ID=Msa1123490-mRNA-1:five_prime_utr;Parent=Msa1123490-mRNA-1
chr7_3 CDS 74362910 74363464 74362910 ID=Msa1123490-mRNA-1:cds;Parent=Msa1123490-mRNA-1
chr7_3 CDS 74365500 74365667 74365500 ID=Msa1123490-mRNA-1:cds;Parent=Msa1123490-mRNA-1
chr7_3 CDS 74365793 74367511 74365793 ID=Msa1123490-mRNA-1:cds;Parent=Msa1123490-mRNA-1
chr7_3 three_prime_UTR 74367512 74367717 74367512 ID=Msa1123490-mRNA-1:three_prime_utr;Parent=Msa1123490-mRNA-1
Gene Sequence

>Msa1123490

ATGTCAGGAACAACAACAATTGCAAAAACAAGGACAGAGTTGTTTCGAACTCGTCTTGGTTCTGCTTTAAGAACAACCTTAGCATGCAGCATAGTTGGTTGCACTGCCCTATATAGCCCTCAACCTATAAAGGGTTACATTAAATTTCCATCTATTTCCTATGTCACAACAATTCTCATAGTGTTGTCTGATGGAACACTTGGTGACGCCGTTAGAGGTTGTTGGCATGTTTTATTGGCAACCATTCAGGTTATGATTTTTTCTCTACTTAGCTTGCAAGTTATACGACCCGATAACTTCGGCAACTGTATGGCTGCGCTGGCAGTGGCTACCGGTGCATTTGTGGTGGCGCTGCCCAAATCGACACACTTGTTGACGAAAAGGATTGCATATGGACAGCTTGTGATAGTATATGTCAGCACAGTTATACATGGTGCACAAGAAGGAGTGGCTACGCATTCAATTCATGTGGCTTGTTCCACTGCACTTGGAGCTATAGCTTCTGTTCTGGCCATGTTGCTGCCCCTGCCCTATCCTCGGTTTGCTTACATTGAGGCAAGGAAGTTCCACCAACTATACATTGAGAATACATCTGAGAGATTAAATTGCAATATAGAGGCCATCTCAGCCTCAGACAACTCAACTGCTGTTGGTTTTATAACTAAAGCCAAGTACCTCTCCACAACAGGAGCCAAGCTTCTCCATAGTATCACAACTACACTGGATGGCATGCATTGGGAGAGACCTCAAACAATAATTTCCAACTCTTGTTGCATTGACCCAGAAGAGAAACTGCAAGATTTGGAAATACCAATAAGAGGGATGGACATTGCTCTATCAAGTGGCATGTCTTTTCCTGTTGGTGTTATTGATGAGGAGCTAAGAGGTGTTCTGCTCAATTGCAGAGAACAAATCAGCCAAAAATTAGACCAGCAAGCTAAATGTTTTGTTCCTTTTGATGCAACCACAACTCAAGAAATGAAACAAGACGTTTTCAACAAAAACCCATCCATAGCCTACAAAAATCTCCCAACATCATTCTTTTTATACTGTGTGCAACTTCTCCGAGATGACTTGTCTATTTCAAAGAAAACTGACCATGTGCAGAAAAAAGCTCAGAAAAATGATGATTCCCAATGTAGCTCCAACAAGCTCAGCGAGCGTTTGATGAACTTGATTCCCAGCCACCAAAGCTTGATCTTTGCATTTAAGTCCTCTCTGTCATTAGGCTTTGCCGTGTTCCTTGGTTTGATATATGATAGGGATAATGCATATTGGGCGGGACTCACAATTGCAATTAGTTTCGTGACTGGACGACAGCCAACATTCTCAGTTGCAAACGCACGAGGAACAGGAACAGCTATGGGATCAATCTACGGGATCATATGTAGCTTCATTTTCCAAAGATTTGTGGATTTAAGGTTCTTAGCTCTTATACCATGGGTCATTTTCTCTTCTTTTCTCAGGCAAAGTAGAATGTATGGGGAATCTGGGGCAATTTCGACAGTTATAGGGGCCTTGTTGATCCTTGGTAGGAAGAACTATAGTACCCCGACTCAATTTGGAGTTGCTAGAATGGCAGAGGCTACAATAGGACTTACTTGCTTCATCATAATAGAGATTATATTAAGCCCCTCAAGAGCTGCAACTCTAGCAAAATCAGAACTTTCTCAAACCTTCAGAACACTCCAAGATTGCATTAAGCAGATTGCCATGACTACCCCTAACGAAAGAGATACGTCGTCTTCAAGTTATCAAGCACTGCGAGAAGAGCACAAGAAGCTTAAATCTCTTGTGTGTCGATTAAGAGAATTTACAGCAGAAGCTGAAATGGAGCCAAATTTCTGGTTCGTACCATTTCATACTACCTGCTACAGCAATATGCTGGGATCTCTATCAAGGACGGTAGATCTCTTGCTTTTTGTGGCATACTCAATGGAGCATGTCTCACAATTGGCACAAAAAGATGGAGTAATTTGGATGGATATTCAAGGTCAAGGGAATGAGAATGTGAAGATTTTTAAGAACAAAGTTGCCCCAATATTGAAAAGCTTGGAAGAAATAACAACGACGAAGTCTATTAAGAAACTTGAAAACGAGTTGAAGAGCAAAAATGTTCCTCACGATCTCGAGTCACAAGAATATCTCAATGCAGACACATTTAGGATATTGAACAGAGATGAAGAGGTTGACAGCATTACAAACTCTTTCCTCCAACATCTAGAGGAAATTGCTGGCAAAACTCTTACCAACAAAGATGAGGAGATGCTTAAAATTCAGATGCTTTTTCATTACAGCTGCTTCGGATTCTGCACCAGTAGCTTGATGAGAGAAATAACCAAGATTGAGAGTGAAATAAAAGAACTACTTATATGGGAGAACCCCGCAAGTCAAACAAACTTCAAAGAAATTCACTCTAAGATCAATCCTCTGCAAACATAG
Protein sequence

>Msa1123490

MSGTTTIAKTRTELFRTRLGSALRTTLACSIVGCTALYSPQPIKGYIKFPSISYVTTILIVLSDGTLGDAVRGCWHVLLATIQVMIFSLLSLQVIRPDNFGNCMAALAVATGAFVVALPKSTHLLTKRIAYGQLVIVYVSTVIHGAQEGVATHSIHVACSTALGAIASVLAMLLPLPYPRFAYIEARKFHQLYIENTSERLNCNIEAISASDNSTAVGFITKAKYLSTTGAKLLHSITTTLDGMHWERPQTIISNSCCIDPEEKLQDLEIPIRGMDIALSSGMSFPVGVIDEELRGVLLNCREQISQKLDQQAKCFVPFDATTTQEMKQDVFNKNPSIAYKNLPTSFFLYCVQLLRDDLSISKKTDHVQKKAQKNDDSQCSSNKLSERLMNLIPSHQSLIFAFKSSLSLGFAVFLGLIYDRDNAYWAGLTIAISFVTGRQPTFSVANARGTGTAMGSIYGIICSFIFQRFVDLRFLALIPWVIFSSFLRQSRMYGESGAISTVIGALLILGRKNYSTPTQFGVARMAEATIGLTCFIIIEIILSPSRAATLAKSELSQTFRTLQDCIKQIAMTTPNERDTSSSSYQALREEHKKLKSLVCRLREFTAEAEMEPNFWFVPFHTTCYSNMLGSLSRTVDLLLFVAYSMEHVSQLAQKDGVIWMDIQGQGNENVKIFKNKVAPILKSLEEITTTKSIKKLENELKSKNVPHDLESQEYLNADTFRILNRDEEVDSITNSFLQHLEEIAGKTLTNKDEEMLKIQMLFHYSCFGFCTSSLMREITKIESEIKELLIWENPASQTNFKEIHSKINPLQT*