AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0996960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996960 MtrunA17_Chr6g0482061 94.444 486 26 1 1 485 1 486 0.0 917
Msa0996960 MtrunA17_Chr4g0042891 49.687 479 228 5 9 485 5 472 3.38e-156 452
Msa0996960 MtrunA17_Chr4g0042931 49.061 479 221 8 9 481 5 466 9.55e-152 441
Msa0996960 MtrunA17_Chr8g0347281 29.675 492 293 14 12 485 19 475 1.63e-51 181
Msa0996960 MtrunA17_Chr5g0442601 28.512 477 305 15 10 466 403 863 1.80e-50 184
Msa0996960 MtrunA17_Chr5g0442601 28.198 344 199 12 95 422 31 342 3.53e-32 130
Msa0996960 MtrunA17_Chr6g0462571 28.247 485 304 13 12 479 5 462 1.06e-49 177
Msa0996960 MtrunA17_Chr3g0079731 27.968 497 309 15 12 480 7 482 1.31e-49 176
Msa0996960 MtrunA17_Chr8g0347271 28.862 492 297 14 12 485 20 476 4.85e-49 175
Msa0996960 MtrunA17_Chr6g0449931 30.493 446 279 12 10 444 5 430 3.38e-48 172
Msa0996960 MtrunA17_Chr8g0336741 28.425 489 301 14 11 479 13 472 5.05e-48 172
Msa0996960 MtrunA17_Chr6g0486251 29.449 472 281 18 12 463 7 446 2.04e-47 170
Msa0996960 MtrunA17_Chr6g0486201 29.449 472 281 18 12 463 7 446 2.04e-47 170
Msa0996960 MtrunA17_Chr6g0462551 27.366 486 310 16 12 479 5 465 2.11e-47 171
Msa0996960 MtrunA17_Chr1g0153451 27.329 483 313 11 11 479 6 464 3.02e-47 170
Msa0996960 MtrunA17_Chr5g0448521 27.941 476 296 16 12 466 6 455 3.34e-47 170
Msa0996960 MtrunA17_Chr5g0442581 28.008 482 301 18 10 466 4 464 5.56e-47 171
Msa0996960 MtrunA17_Chr5g0429681 29.607 483 294 19 10 475 43 496 9.16e-47 169
Msa0996960 MtrunA17_Chr7g0275511 28.450 471 298 15 12 466 16 463 1.56e-46 168
Msa0996960 MtrunA17_Chr5g0429711 29.713 488 304 18 1 477 1 460 3.19e-46 167
Msa0996960 MtrunA17_Chr2g0302961 27.637 474 300 14 11 466 5 453 2.12e-45 165
Msa0996960 MtrunA17_Chr6g0462531 28.513 491 302 17 12 481 5 467 3.50e-45 164
Msa0996960 MtrunA17_Chr8g0335161 29.098 488 264 19 10 461 5 446 4.14e-45 164
Msa0996960 MtrunA17_Chr6g0462541 26.915 483 315 14 12 479 5 464 1.08e-44 163
Msa0996960 MtrunA17_Chr6g0459311 27.932 469 292 17 12 463 14 453 1.97e-44 162
Msa0996960 MtrunA17_Chr5g0442521 28.452 478 303 17 10 466 4 463 2.75e-44 162
Msa0996960 MtrunA17_Chr8g0336691 28.041 485 310 14 11 479 13 474 1.21e-43 165
Msa0996960 MtrunA17_Chr8g0336691 28.074 488 306 12 11 479 919 1380 2.46e-38 149
Msa0996960 MtrunA17_Chr8g0336691 25.636 472 310 11 11 479 480 913 1.59e-34 138
Msa0996960 MtrunA17_Chr8g0335141 27.742 465 295 17 12 461 10 448 1.80e-43 159
Msa0996960 MtrunA17_Chr5g0442491 26.069 491 326 14 10 481 4 476 3.27e-43 159
Msa0996960 MtrunA17_Chr8g0336731 30.102 392 242 11 106 482 119 493 3.42e-43 159
Msa0996960 MtrunA17_Chr5g0442541 26.543 486 312 21 10 476 4 463 8.88e-43 157
Msa0996960 MtrunA17_Chr8g0370941 27.856 499 289 19 10 466 7 476 2.17e-42 157
Msa0996960 MtrunA17_Chr6g0454321 26.160 474 310 14 11 464 10 463 4.76e-42 158
Msa0996960 MtrunA17_Chr8g0334861 27.885 416 268 10 82 478 61 463 6.76e-42 155
Msa0996960 MtrunA17_Chr8g0336331 26.434 488 318 13 10 477 9 475 9.22e-42 155
Msa0996960 MtrunA17_Chr8g0336651 27.515 487 312 13 11 479 781 1244 1.41e-41 159
Msa0996960 MtrunA17_Chr8g0336651 26.882 465 304 12 11 463 6 446 2.55e-39 152
Msa0996960 MtrunA17_Chr8g0336651 30.435 276 154 7 209 479 533 775 7.16e-27 115
Msa0996960 MtrunA17_Chr6g0454341 25.696 467 310 11 11 460 10 456 2.70e-41 154
Msa0996960 MtrunA17_Chr6g0462521 27.572 486 303 17 12 483 5 455 1.32e-40 151
Msa0996960 MtrunA17_Chr8g0339461 28.691 359 234 8 115 461 103 451 1.62e-40 151
Msa0996960 MtrunA17_Chr7g0232401 27.949 390 251 10 98 471 85 460 1.63e-40 151
Msa0996960 MtrunA17_Chr7g0232411 27.789 493 311 15 11 485 6 471 2.42e-40 151
Msa0996960 MtrunA17_Chr5g0442561 24.898 490 331 18 10 481 4 474 3.47e-40 150
Msa0996960 MtrunA17_Chr7g0232391 27.347 490 315 16 11 484 6 470 3.47e-40 150
Msa0996960 MtrunA17_Chr8g0339451 28.841 371 239 10 106 461 83 443 6.60e-40 150
Msa0996960 MtrunA17_Chr7g0232331 27.959 490 307 18 9 477 4 468 1.14e-39 149
Msa0996960 MtrunA17_Chr6g0454301 26.380 489 316 14 11 477 263 729 3.13e-39 151
Msa0996960 MtrunA17_Chr6g0454301 28.870 239 148 7 249 477 2 228 8.09e-20 92.8
Msa0996960 MtrunA17_Chr2g0302991 26.556 482 312 15 12 477 6 461 3.65e-39 147
Msa0996960 MtrunA17_Chr5g0418541 47.917 192 85 6 11 199 8 187 5.19e-39 140
Msa0996960 MtrunA17_Chr4g0053501 24.646 495 323 14 1 477 1 463 5.46e-39 148
Msa0996960 MtrunA17_Chr7g0232311 26.824 466 299 15 11 462 6 443 5.62e-39 147
Msa0996960 MtrunA17_Chr6g0454191 27.699 491 310 17 11 477 10 479 7.98e-39 147
Msa0996960 MtrunA17_Chr3g0121991 27.859 481 276 21 21 466 89 533 1.50e-38 147
Msa0996960 MtrunA17_Chr5g0431401 27.027 481 286 18 3 466 4 436 3.12e-38 145
Msa0996960 MtrunA17_Chr6g0464881 26.205 477 290 17 9 466 9 442 4.77e-38 144
Msa0996960 MtrunA17_Chr8g0339631 28.232 379 238 12 106 466 94 456 7.96e-38 144
Msa0996960 MtrunA17_Chr2g0278711 26.575 508 289 19 11 477 11 475 1.20e-37 144
Msa0996960 MtrunA17_Chr8g0373301 27.794 349 229 11 106 444 94 429 1.22e-37 143
Msa0996960 MtrunA17_Chr7g0232341 27.292 480 307 16 9 470 4 459 2.49e-37 142
Msa0996960 MtrunA17_Chr8g0334851 28.358 402 258 11 81 466 70 457 3.55e-37 142
Msa0996960 MtrunA17_Chr6g0454151 29.032 403 244 12 97 477 94 476 1.00e-36 141
Msa0996960 MtrunA17_Chr7g0243681 27.479 484 294 19 11 465 11 466 1.66e-36 140
Msa0996960 MtrunA17_Chr8g0339601 29.503 322 194 9 158 461 4 310 2.29e-36 137
Msa0996960 MtrunA17_Chr8g0377921 26.531 490 286 18 12 468 5 453 2.85e-36 139
Msa0996960 MtrunA17_Chr5g0426431 25.470 479 304 14 9 462 10 460 3.55e-36 139
Msa0996960 MtrunA17_Chr5g0442511 26.025 488 296 19 10 476 48 491 6.39e-36 139
Msa0996960 MtrunA17_Chr3g0078841 24.435 487 328 12 11 477 10 476 1.50e-35 138
Msa0996960 MtrunA17_Chr3g0122001 27.273 484 275 21 21 466 496 940 2.15e-35 140
Msa0996960 MtrunA17_Chr3g0122001 25.678 479 290 20 21 466 16 461 4.00e-33 133
Msa0996960 MtrunA17_Chr4g0044511 28.226 496 273 16 11 466 40 492 2.82e-35 137
Msa0996960 MtrunA17_Chr6g0464921 25.956 497 283 18 1 466 1 443 4.18e-35 136
Msa0996960 MtrunA17_Chr8g0377941 24.490 490 291 16 21 477 17 460 6.90e-35 135
Msa0996960 MtrunA17_Chr3g0092641 24.684 474 314 13 9 462 10 460 9.69e-35 135
Msa0996960 MtrunA17_Chr3g0118671 25.203 492 318 14 11 477 6 472 1.01e-34 135
Msa0996960 MtrunA17_Chr5g0431421 26.132 486 284 19 3 466 4 436 1.74e-34 134
Msa0996960 MtrunA17_Chr3g0118691 25.662 491 317 14 11 477 15 481 2.05e-34 135
Msa0996960 MtrunA17_Chr6g0454291 26.978 493 310 18 11 477 7 475 2.77e-34 134
Msa0996960 MtrunA17_Chr5g0414331 25.866 491 287 17 11 476 13 451 3.19e-34 134
Msa0996960 MtrunA17_Chr7g0243771 27.655 499 275 21 11 465 6 462 3.28e-34 134
Msa0996960 MtrunA17_Chr6g0454201 26.337 505 318 16 1 477 1 479 3.29e-34 134
Msa0996960 MtrunA17_Chr8g0366391 27.238 525 289 20 1 479 1 478 3.43e-34 134
Msa0996960 MtrunA17_Chr3g0098111 26.210 496 323 18 1 479 1 470 4.31e-34 134
Msa0996960 MtrunA17_Chr6g0454181 26.000 500 306 18 11 477 10 478 8.56e-34 133
Msa0996960 MtrunA17_Chr7g0235051 26.994 489 284 20 1 465 1 440 8.72e-34 132
Msa0996960 MtrunA17_Chr3g0112771 27.564 468 285 15 12 466 13 439 8.82e-34 132
Msa0996960 MtrunA17_Chr7g0265041 28.514 498 286 19 9 466 9 476 1.00e-33 133
Msa0996960 MtrunA17_Chr6g0453951 26.403 481 311 16 1 460 47 505 1.09e-33 133
Msa0996960 MtrunA17_Chr3g0118701 25.424 472 307 14 11 461 15 462 2.14e-33 132
Msa0996960 MtrunA17_Chr4g0050341 25.514 486 316 14 6 466 14 478 2.74e-33 132
Msa0996960 MtrunA17_Chr5g0414321 27.236 492 279 18 1 466 1 439 2.74e-33 131
Msa0996960 MtrunA17_Chr6g0454401 24.540 489 328 14 11 477 10 479 4.91e-33 130
Msa0996960 MtrunA17_Chr8g0361371 24.440 491 321 13 12 479 8 471 5.49e-33 130
Msa0996960 MtrunA17_Chr4g0011051 25.152 493 306 17 11 466 9 475 1.15e-32 130
Msa0996960 MtrunA17_Chr4g0014061 26.908 498 294 19 12 476 10 470 2.05e-32 129
Msa0996960 MtrunA17_Chr4g0066151 27.490 502 292 18 12 480 19 481 4.99e-32 128
Msa0996960 MtrunA17_Chr3g0118771 25.410 488 322 14 11 477 21 487 7.39e-32 127
Msa0996960 MtrunA17_Chr5g0431371 25.684 475 290 17 9 466 8 436 9.63e-32 126
Msa0996960 MtrunA17_Chr5g0431361 25.462 487 279 18 9 466 10 441 9.68e-32 127
Msa0996960 MtrunA17_Chr4g0044521 26.955 486 283 19 12 466 10 454 1.12e-31 127
Msa0996960 MtrunA17_Chr7g0243931 25.403 496 314 16 1 465 7 477 1.14e-31 127
Msa0996960 MtrunA17_Chr7g0217881 26.854 499 285 20 11 477 10 460 1.16e-31 126
Msa0996960 MtrunA17_Chr6g0454351 26.132 486 306 19 11 477 12 463 1.78e-31 126
Msa0996960 MtrunA17_Chr5g0431441 25.413 484 297 19 11 472 18 459 1.79e-31 126
Msa0996960 MtrunA17_Chr4g0066221 27.000 500 289 19 5 466 7 468 1.81e-31 126
Msa0996960 MtrunA17_Chr8g0359821 25.212 472 306 16 11 460 10 456 2.33e-31 126
Msa0996960 MtrunA17_Chr7g0243631 26.733 505 304 19 11 479 13 487 2.53e-31 126
Msa0996960 MtrunA17_Chr3g0118661 26.327 490 309 17 1 466 6 467 3.89e-31 125
Msa0996960 MtrunA17_Chr7g0265101 26.453 499 304 20 4 466 3 474 4.01e-31 125
Msa0996960 MtrunA17_Chr8g0334831 24.528 477 296 16 12 459 7 448 5.35e-31 125
Msa0996960 MtrunA17_Chr6g0464841 25.400 500 301 20 1 478 1 450 5.71e-31 124
Msa0996960 MtrunA17_Chr5g0420801 35.772 246 144 9 223 465 211 445 6.07e-31 124
Msa0996960 MtrunA17_Chr7g0232351 27.654 405 239 14 11 393 6 378 6.61e-31 123
Msa0996960 MtrunA17_Chr7g0243801 27.122 483 298 21 11 465 7 463 7.38e-31 124
Msa0996960 MtrunA17_Chr6g0454141 24.949 489 325 14 11 477 10 478 7.48e-31 124
Msa0996960 MtrunA17_Chr4g0044501 26.369 493 309 16 11 477 10 474 1.08e-30 124
Msa0996960 MtrunA17_Chr1g0207981 23.770 488 322 13 11 477 13 471 1.16e-30 124
Msa0996960 MtrunA17_Chr8g0374941 27.655 499 268 21 15 466 953 1405 1.47e-30 126
Msa0996960 MtrunA17_Chr8g0374941 26.946 501 279 18 15 476 15 467 7.36e-30 124
Msa0996960 MtrunA17_Chr8g0374941 27.311 476 286 19 15 461 480 924 4.71e-25 109
Msa0996960 MtrunA17_Chr6g0464871 25.498 502 298 19 1 478 13 462 2.16e-30 123
Msa0996960 MtrunA17_Chr8g0380531 23.577 492 310 17 11 479 10 458 2.32e-30 123
Msa0996960 MtrunA17_Chr6g0453961 23.647 499 320 16 11 477 19 488 2.32e-30 123
Msa0996960 MtrunA17_Chr5g0423981 24.587 484 298 15 11 477 10 443 2.77e-30 122
Msa0996960 MtrunA17_Chr1g0161351 24.746 493 330 16 4 479 30 498 3.85e-30 122
Msa0996960 MtrunA17_Chr3g0112761 27.093 454 287 15 21 465 18 436 3.86e-30 122
Msa0996960 MtrunA17_Chr4g0053321 25.482 467 292 15 21 466 36 467 4.28e-30 122
Msa0996960 MtrunA17_Chr7g0218791 23.861 461 314 12 11 465 5 434 6.43e-30 121
Msa0996960 MtrunA17_Chr7g0265151 32.222 270 147 10 222 466 213 471 6.83e-30 122
Msa0996960 MtrunA17_Chr6g0454331 24.699 498 317 16 11 477 7 477 6.89e-30 122
Msa0996960 MtrunA17_Chr6g0454261 26.061 495 312 15 11 477 10 478 1.39e-29 121
Msa0996960 MtrunA17_Chr6g0452771 26.585 410 249 15 96 477 93 478 1.73e-29 120
Msa0996960 MtrunA17_Chr1g0179901 25.743 505 309 20 11 477 16 492 1.74e-29 120
Msa0996960 MtrunA17_Chr5g0416821 25.755 497 303 18 12 479 15 474 1.90e-29 120
Msa0996960 MtrunA17_Chr4g0066261 25.100 502 281 18 14 466 14 469 2.71e-29 120
Msa0996960 MtrunA17_Chr6g0463891 24.219 512 327 16 1 479 2 485 3.09e-29 120
Msa0996960 MtrunA17_Chr1g0207831 29.930 284 166 9 209 479 201 464 3.56e-29 119
Msa0996960 MtrunA17_Chr8g0365811 25.352 497 298 16 21 483 505 962 4.22e-29 121
Msa0996960 MtrunA17_Chr8g0365811 24.439 446 285 14 21 442 19 436 4.00e-24 106
Msa0996960 MtrunA17_Chr5g0403641 26.543 486 273 19 11 466 59 490 4.83e-29 120
Msa0996960 MtrunA17_Chr5g0419771 25.299 502 314 18 11 477 36 511 5.39e-29 119
Msa0996960 MtrunA17_Chr5g0401851 27.515 487 291 20 14 466 13 471 5.64e-29 119
Msa0996960 MtrunA17_Chr5g0426401 28.276 290 178 8 185 461 20 292 5.93e-29 116
Msa0996960 MtrunA17_Chr6g0454211 25.714 490 320 17 11 477 297 765 6.35e-29 120
Msa0996960 MtrunA17_Chr6g0454211 27.313 227 114 6 185 402 61 245 3.77e-14 75.1
Msa0996960 MtrunA17_Chr3g0106251 28.070 285 172 8 198 472 26 287 8.04e-29 115
Msa0996960 MtrunA17_Chr5g0401721 24.089 494 300 19 12 477 9 455 8.42e-29 119
Msa0996960 MtrunA17_Chr5g0412111 26.556 482 291 20 11 466 5 449 1.00e-28 118
Msa0996960 MtrunA17_Chr7g0243851 25.306 490 280 19 1 465 1 429 1.19e-28 118
Msa0996960 MtrunA17_Chr7g0265051 25.948 501 304 19 3 466 2 472 1.23e-28 118
Msa0996960 MtrunA17_Chr6g0464861 24.950 505 296 16 1 478 1 449 1.32e-28 117
Msa0996960 MtrunA17_Chr5g0419761 27.607 489 290 21 11 463 9 469 1.38e-28 118
Msa0996960 MtrunA17_Chr5g0412101 26.078 487 289 19 11 466 12 458 1.46e-28 118
Msa0996960 MtrunA17_Chr1g0207861 25.251 499 304 20 10 477 7 467 1.70e-28 117
Msa0996960 MtrunA17_Chr3g0118711 25.105 478 312 15 11 465 13 467 2.04e-28 117
Msa0996960 MtrunA17_Chr3g0106231 27.682 289 172 8 198 472 180 445 2.22e-28 117
Msa0996960 MtrunA17_Chr4g0060511 25.234 535 297 21 1 479 1 488 2.35e-28 117
Msa0996960 MtrunA17_Chr7g0265141 29.841 315 191 9 184 477 179 484 3.78e-28 117
Msa0996960 MtrunA17_Chr8g0339441 25.176 425 237 14 81 481 68 435 5.13e-28 115
Msa0996960 MtrunA17_Chr1g0207951 24.260 507 327 21 1 485 648 1119 5.97e-28 118
Msa0996960 MtrunA17_Chr1g0207951 27.500 280 167 8 218 484 320 576 7.47e-26 111
Msa0996960 MtrunA17_Chr7g0275681 26.600 500 306 20 9 477 10 479 7.65e-28 115
Msa0996960 MtrunA17_Chr7g0243781 32.558 258 153 8 222 466 214 463 7.85e-28 115
Msa0996960 MtrunA17_Chr8g0369341 31.366 322 188 13 165 477 166 463 8.51e-28 115
Msa0996960 MtrunA17_Chr1g0153461 33.333 213 128 4 278 479 4 213 8.92e-28 110
Msa0996960 MtrunA17_Chr6g0454121 25.887 479 295 17 11 460 10 457 1.09e-27 115
Msa0996960 MtrunA17_Chr7g0250001 25.051 491 272 20 11 466 6 435 1.19e-27 115
Msa0996960 MtrunA17_Chr6g0454251 25.558 403 265 14 11 393 7 394 3.79e-27 112
Msa0996960 MtrunA17_Chr6g0454131 28.772 285 177 7 185 460 190 457 4.15e-27 114
Msa0996960 MtrunA17_Chr4g0066131 27.273 484 288 19 12 466 14 462 6.01e-27 113
Msa0996960 MtrunA17_Chr5g0431431 31.004 229 130 7 185 408 116 321 9.51e-27 111
Msa0996960 MtrunA17_Chr4g0032331 24.473 474 298 18 12 472 9 435 1.04e-26 112
Msa0996960 MtrunA17_Chr6g0454361 25.304 494 317 18 11 477 11 479 1.13e-26 112
Msa0996960 MtrunA17_Chr7g0243761 24.883 426 244 11 11 401 11 395 1.90e-26 111
Msa0996960 MtrunA17_Chr4g0066201 25.100 502 293 20 14 479 21 475 2.06e-26 112
Msa0996960 MtrunA17_Chr2g0307961 30.466 279 163 9 214 477 205 467 2.19e-26 111
Msa0996960 MtrunA17_Chr2g0294941 30.142 282 170 11 197 460 89 361 2.69e-26 110
Msa0996960 MtrunA17_Chr5g0410941 27.237 503 307 22 5 479 19 490 3.31e-26 111
Msa0996960 MtrunA17_Chr5g0412131 26.501 483 291 20 11 466 12 457 4.03e-26 110
Msa0996960 MtrunA17_Chr7g0243861 24.950 497 323 16 11 479 14 488 4.41e-26 110
Msa0996960 MtrunA17_Chr2g0294931 26.804 485 298 17 12 466 12 469 4.44e-26 110
Msa0996960 MtrunA17_Chr7g0243951 24.558 509 301 21 1 465 1 470 6.11e-26 110
Msa0996960 MtrunA17_Chr1g0207931 29.091 275 162 10 221 479 241 498 6.72e-26 110
Msa0996960 MtrunA17_Chr4g0066281 25.470 479 292 17 14 466 15 454 7.13e-26 110
Msa0996960 MtrunA17_Chr8g0374931 27.178 482 294 17 14 465 14 468 7.59e-26 110
Msa0996960 MtrunA17_Chr1g0159551 29.412 221 144 6 253 465 230 446 9.96e-26 109
Msa0996960 MtrunA17_Chr6g0454271 28.421 285 177 8 203 477 18 285 1.25e-25 106
Msa0996960 MtrunA17_Chr3g0118721 30.827 266 156 8 224 477 39 288 1.32e-25 106
Msa0996960 MtrunA17_Chr4g0044481 32.932 249 140 7 185 420 170 404 1.51e-25 108
Msa0996960 MtrunA17_Chr5g0393591 23.256 430 256 13 5 413 11 387 1.60e-25 108
Msa0996960 MtrunA17_Chr6g0463861 24.096 498 299 17 5 466 7 461 2.19e-25 108
Msa0996960 MtrunA17_Chr5g0416741 24.096 498 321 16 12 479 14 484 3.66e-25 108
Msa0996960 MtrunA17_Chr6g0454221 31.905 210 124 5 278 482 39 234 4.57e-25 105
Msa0996960 MtrunA17_Chr7g0218311 29.221 308 190 10 190 479 187 484 5.42e-25 107
Msa0996960 MtrunA17_Chr2g0294921 25.933 509 298 15 12 479 161 631 1.16e-24 107
Msa0996960 MtrunA17_Chr8g0350881 27.383 493 277 20 15 466 16 468 1.17e-24 106
Msa0996960 MtrunA17_Chr7g0218821 22.629 464 311 14 9 459 3 431 1.56e-24 105
Msa0996960 MtrunA17_Chr1g0173121 29.412 221 143 6 253 465 234 449 1.91e-24 105
Msa0996960 MtrunA17_Chr5g0432731 27.063 303 170 12 185 466 12 284 1.97e-24 103
Msa0996960 MtrunA17_Chr1g0207971 26.619 278 163 10 218 479 202 454 2.71e-24 105
Msa0996960 MtrunA17_Chr7g0218811 22.222 459 304 15 9 457 13 428 2.89e-24 105
Msa0996960 MtrunA17_Chr8g0374901 26.294 483 293 17 15 466 16 466 3.01e-24 105
Msa0996960 MtrunA17_Chr5g0442501 26.019 319 213 11 10 324 4 303 3.55e-24 102
Msa0996960 MtrunA17_Chr8g0382021 29.464 224 142 7 253 465 257 475 5.08e-24 104
Msa0996960 MtrunA17_Chr7g0249981 23.409 440 276 14 21 444 35 429 6.04e-24 104
Msa0996960 MtrunA17_Chr7g0243811 36.813 182 107 5 220 401 187 360 6.12e-24 103
Msa0996960 MtrunA17_Chr4g0066171 24.145 497 303 19 14 479 24 477 6.53e-24 104
Msa0996960 MtrunA17_Chr2g0329111 30.435 253 155 8 223 464 217 459 1.05e-23 103
Msa0996960 MtrunA17_Chr7g0241781 25.325 462 278 17 5 456 3 407 1.06e-23 103
Msa0996960 MtrunA17_Chr3g0079711 31.343 201 103 4 304 481 3 191 2.43e-23 97.4
Msa0996960 MtrunA17_Chr8g0367221 24.786 468 310 15 3 456 1280 1719 2.51e-23 104
Msa0996960 MtrunA17_Chr8g0367221 34.028 144 92 1 271 414 262 402 2.53e-22 101
Msa0996960 MtrunA17_Chr8g0367221 34.969 163 101 3 252 414 1032 1189 1.82e-20 95.5
Msa0996960 MtrunA17_Chr7g0241801 25.054 463 278 15 5 456 3 407 3.49e-23 101
Msa0996960 MtrunA17_Chr6g0463851 25.202 496 289 20 14 466 14 470 3.57e-23 102
Msa0996960 MtrunA17_Chr7g0243871 29.455 275 166 10 220 479 212 473 4.29e-23 102
Msa0996960 MtrunA17_Chr7g0249931 25.208 480 300 18 11 470 40 480 5.63e-23 101
Msa0996960 MtrunA17_Chr8g0355221 25.051 495 317 18 14 479 18 487 6.35e-23 101
Msa0996960 MtrunA17_Chr5g0409591 31.111 180 102 2 251 408 236 415 6.46e-23 101
Msa0996960 MtrunA17_Chr8g0361411 30.566 265 160 7 223 477 202 452 7.38e-23 101
Msa0996960 MtrunA17_Chr7g0265111 27.236 492 295 20 11 466 39 503 9.05e-23 101
Msa0996960 MtrunA17_Chr1g0165701 26.305 498 304 20 14 479 18 484 2.39e-22 99.8
Msa0996960 MtrunA17_Chr5g0428081 26.775 493 308 17 14 479 14 480 2.74e-22 99.8
Msa0996960 MtrunA17_Chr6g0454171 28.155 309 171 11 188 477 32 308 7.03e-22 96.3
Msa0996960 MtrunA17_Chr4g0072761 26.923 312 193 10 162 466 157 440 9.23e-22 97.8
Msa0996960 MtrunA17_Chr8g0374971 26.151 478 304 18 14 466 15 468 1.01e-21 97.8
Msa0996960 MtrunA17_Chr5g0440421 24.845 483 307 18 11 464 10 465 3.85e-21 96.3
Msa0996960 MtrunA17_Chr7g0243711 33.005 203 114 6 278 465 108 303 5.61e-21 94.0
Msa0996960 MtrunA17_Chr8g0355011 24.157 356 208 11 114 460 38 340 1.05e-20 93.6
Msa0996960 MtrunA17_Chr7g0243611 32.500 200 113 7 205 395 64 250 1.16e-20 92.4
Msa0996960 MtrunA17_Chr3g0118751 22.951 488 305 14 11 477 6 443 2.26e-20 93.6
Msa0996960 MtrunA17_Chr7g0249961 29.756 205 119 6 250 444 33 222 7.88e-20 89.4
Msa0996960 MtrunA17_Chr7g0243911 31.481 216 126 8 277 484 21 222 1.05e-19 87.8
Msa0996960 MtrunA17_Chr4g0072771 27.178 287 179 9 185 466 192 453 1.71e-19 90.9
Msa0996960 MtrunA17_Chr7g0218841 20.915 459 324 11 11 466 6 428 1.33e-18 88.2
Msa0996960 MtrunA17_Chr7g0218831 21.757 478 296 17 11 466 6 427 1.00e-17 85.5
Msa0996960 MtrunA17_Chr6g0454371 29.775 178 110 5 303 477 4 169 1.48e-17 80.5
Msa0996960 MtrunA17_Chr4g0029131 22.927 410 267 10 11 408 12 384 2.89e-17 84.7
Msa0996960 MtrunA17_Chr3g0079721 29.612 206 128 9 100 297 91 287 5.25e-17 81.3
Msa0996960 MtrunA17_Chr8g0336261 33.103 145 81 4 303 445 4 134 5.34e-17 77.8
Msa0996960 MtrunA17_Chr7g0231631 29.455 275 161 10 219 479 5 260 6.89e-16 77.8
Msa0996960 MtrunA17_Chr1g0196851 30.573 157 102 2 252 408 275 424 2.08e-15 78.6
Msa0996960 MtrunA17_Chr8g0357361 30.846 201 120 6 218 410 58 247 3.96e-15 75.5
Msa0996960 MtrunA17_Chr8g0334841 34.043 141 85 3 185 324 1 134 5.40e-15 72.8
Msa0996960 MtrunA17_Chr6g0449991 26.346 353 217 12 11 354 6 324 5.87e-15 75.9
Msa0996960 MtrunA17_Chr5g0448551 23.198 444 285 17 12 439 8 411 9.13e-15 76.3
Msa0996960 MtrunA17_Chr4g0066141 35.762 151 84 6 329 466 189 339 1.53e-14 75.1
Msa0996960 MtrunA17_Chr2g0278721 22.699 489 294 20 11 462 517 958 2.15e-14 76.3
Msa0996960 MtrunA17_Chr2g0278721 24.235 425 265 16 11 415 15 402 5.59e-14 74.7
Msa0996960 MtrunA17_Chr8g0336251 23.975 488 297 20 11 469 7 449 2.76e-14 75.1
Msa0996960 MtrunA17_Chr2g0278741 23.059 425 270 14 11 415 97 484 2.96e-14 75.1
Msa0996960 MtrunA17_Chr4g0040711 23.478 460 305 15 11 447 8 443 3.57e-14 74.7
Msa0996960 MtrunA17_Chr8g0336321 23.975 488 297 20 11 469 7 449 4.08e-14 74.3
Msa0996960 MtrunA17_Chr4g0069611 28.351 194 126 5 224 415 215 397 4.56e-14 74.3
Msa0996960 MtrunA17_Chr4g0029151 31.496 127 86 1 275 401 260 385 1.11e-13 73.2
Msa0996960 MtrunA17_Chr2g0319801 24.330 485 276 18 5 459 2 425 1.38e-13 72.8
Msa0996960 MtrunA17_Chr6g0466831 22.892 415 278 12 11 415 18 400 1.58e-13 72.8
Msa0996960 MtrunA17_Chr8g0337381 34.884 129 79 3 353 479 1 126 1.59e-13 67.8
Msa0996960 MtrunA17_Chr2g0319731 24.689 482 286 18 1 459 15 442 2.05e-13 72.4
Msa0996960 MtrunA17_Chr1g0207881 34.646 127 78 3 357 479 260 385 2.62e-12 68.6
Msa0996960 MtrunA17_Chr6g0466841 22.410 415 280 12 11 415 18 400 4.89e-12 67.8
Msa0996960 MtrunA17_Chr3g0092031 27.941 136 91 2 280 415 6 134 1.20e-11 63.9
Msa0996960 MtrunA17_Chr6g0464091 22.897 428 281 14 5 415 12 407 1.74e-11 66.2
Msa0996960 MtrunA17_Chr2g0319751 26.667 195 133 2 251 445 713 897 3.08e-11 65.9
Msa0996960 MtrunA17_Chr6g0453981 27.059 170 103 4 185 338 61 225 7.48e-11 62.4
Msa0996960 MtrunA17_Chr2g0319791 25.641 195 135 2 251 445 236 420 8.40e-11 63.9
Msa0996960 MtrunA17_Chr5g0427571 24.057 212 141 6 251 450 68 271 9.68e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996960 AT3G21790.1 26.369 493 326 15 11 481 4 481 2.22e-47 171
Msa0996960 AT3G16520.3 28.763 372 255 7 107 478 98 459 1.86e-46 168
Msa0996960 AT4G01070.1 28.051 467 297 15 11 463 8 449 2.85e-46 168
Msa0996960 AT1G07250.1 27.101 476 322 13 14 477 9 471 2.17e-45 165
Msa0996960 AT2G29740.1 28.827 392 252 12 98 476 95 472 2.86e-45 165
Msa0996960 AT1G01420.2 27.273 473 312 10 1 463 1 451 3.71e-45 165
Msa0996960 AT1G01390.1 28.261 414 263 10 1 403 1 391 5.29e-45 164
Msa0996960 AT1G01420.1 27.430 463 304 10 11 463 8 448 5.61e-45 164
Msa0996960 AT1G01390.2 28.261 414 263 10 1 403 18 408 8.97e-45 164
Msa0996960 AT3G21780.1 28.678 401 256 14 100 481 82 471 1.14e-44 163
Msa0996960 AT3G16520.2 29.213 356 242 7 107 462 98 443 2.77e-44 162
Msa0996960 AT3G16520.1 29.213 356 242 7 107 462 98 443 2.89e-44 162
Msa0996960 AT1G07260.1 27.869 488 310 16 10 477 5 470 3.16e-44 162
Msa0996960 AT3G21760.1 26.069 491 332 14 11 481 4 483 2.00e-43 160
Msa0996960 AT2G29710.1 26.471 476 324 14 10 477 4 461 2.75e-43 159
Msa0996960 AT3G21800.1 26.033 484 325 14 12 477 6 474 9.38e-43 158
Msa0996960 AT1G78270.1 28.008 482 294 14 2 460 7 458 4.69e-42 156
Msa0996960 AT4G15280.1 24.896 482 334 14 11 477 4 472 3.74e-41 154
Msa0996960 AT4G15280.2 24.896 482 334 14 11 477 36 504 6.51e-41 154
Msa0996960 AT2G29730.1 26.360 478 314 18 14 477 8 461 6.91e-41 153
Msa0996960 AT3G21750.1 24.948 485 325 15 11 477 4 467 3.85e-40 151
Msa0996960 AT2G30140.2 28.392 479 281 20 11 473 13 445 1.20e-37 144
Msa0996960 AT2G36970.1 24.851 503 322 17 11 485 10 484 2.29e-37 143
Msa0996960 AT2G30140.1 28.033 478 285 18 11 473 13 446 3.11e-37 142
Msa0996960 AT2G18570.1 26.261 476 305 16 11 466 5 454 1.07e-36 141
Msa0996960 AT3G50740.1 25.684 475 315 16 11 467 7 461 1.51e-36 141
Msa0996960 AT4G15260.1 26.503 366 232 11 133 477 4 353 4.52e-36 137
Msa0996960 AT1G07240.1 26.349 482 316 17 9 469 3 466 4.53e-36 139
Msa0996960 AT1G22400.1 24.082 490 323 16 11 473 13 480 7.09e-36 139
Msa0996960 AT4G36770.1 27.553 421 251 14 11 408 4 393 1.01e-35 138
Msa0996960 AT2G31750.1 25.880 483 283 17 21 478 18 450 2.37e-35 137
Msa0996960 AT3G21560.1 24.850 499 318 15 4 477 5 471 5.70e-35 137
Msa0996960 AT2G31750.2 25.880 483 283 17 21 478 18 450 6.00e-35 137
Msa0996960 AT2G31790.1 27.273 495 285 16 10 478 7 452 1.13e-34 135
Msa0996960 AT1G22380.1 25.562 489 316 16 11 473 13 479 1.36e-34 135
Msa0996960 AT1G22360.1 23.941 472 316 14 11 461 10 459 1.57e-34 135
Msa0996960 AT2G36750.1 26.572 493 294 18 11 466 10 471 4.14e-34 134
Msa0996960 AT4G15480.1 26.559 497 297 18 11 477 19 477 8.44e-34 133
Msa0996960 AT2G29750.1 27.461 386 251 14 98 475 106 470 2.99e-33 132
Msa0996960 AT1G05680.1 25.826 484 284 17 10 466 5 440 3.50e-33 131
Msa0996960 AT5G26310.1 24.580 476 308 15 11 465 7 452 6.16e-33 131
Msa0996960 AT5G66690.1 24.684 474 310 16 11 465 7 452 1.87e-32 129
Msa0996960 AT1G22340.1 25.523 478 302 14 11 461 13 463 2.21e-32 129
Msa0996960 AT2G36780.1 27.033 492 294 20 11 466 14 476 2.24e-32 129
Msa0996960 AT5G03490.1 29.352 494 275 24 11 479 19 463 8.45e-32 127
Msa0996960 AT4G14090.1 24.286 490 300 16 11 477 13 454 1.14e-31 127
Msa0996960 AT3G53160.1 25.290 518 318 23 4 482 3 490 2.49e-31 126
Msa0996960 AT1G51210.1 28.446 457 269 16 11 453 20 432 4.40e-31 125
Msa0996960 AT4G34131.1 29.051 506 301 17 3 478 2 479 7.93e-31 125
Msa0996960 AT2G30150.2 26.176 489 293 18 9 477 11 451 8.66e-31 124
Msa0996960 AT1G22360.2 23.415 410 280 11 11 402 10 403 9.53e-31 124
Msa0996960 AT5G59580.1 27.885 416 261 14 11 419 9 392 1.32e-30 124
Msa0996960 AT1G05560.1 24.096 498 295 16 11 477 5 450 1.40e-30 124
Msa0996960 AT5G59590.1 27.021 470 289 18 10 466 9 437 1.68e-30 123
Msa0996960 AT2G18560.1 27.066 351 224 12 133 466 29 364 2.02e-30 122
Msa0996960 AT1G05560.2 24.297 498 294 17 11 477 55 500 3.15e-30 124
Msa0996960 AT2G36770.1 25.205 488 308 18 11 466 14 476 3.49e-30 123
Msa0996960 AT2G23250.1 26.981 467 269 15 21 466 8 423 4.24e-30 122
Msa0996960 AT4G34138.1 25.755 497 309 15 11 477 11 477 4.64e-30 122
Msa0996960 AT1G05675.1 24.689 482 292 16 10 466 5 440 5.06e-30 122
Msa0996960 AT2G36800.1 24.644 491 308 15 11 466 12 475 5.47e-30 122
Msa0996960 AT1G73880.1 29.817 493 271 23 4 466 7 454 6.41e-30 122
Msa0996960 AT2G30150.1 25.880 483 290 18 15 477 1 435 3.76e-29 119
Msa0996960 AT5G14860.1 26.059 472 301 16 11 460 8 453 6.75e-29 119
Msa0996960 AT2G15480.1 26.721 494 311 18 11 477 10 479 6.88e-29 119
Msa0996960 AT2G23260.1 30.159 315 183 10 169 466 147 441 9.69e-29 118
Msa0996960 AT2G36760.1 25.052 483 315 18 11 466 14 476 2.23e-28 118
Msa0996960 AT2G16890.2 24.411 467 320 11 11 466 9 453 9.89e-28 116
Msa0996960 AT2G15480.2 25.992 504 312 18 11 477 10 489 1.11e-27 116
Msa0996960 AT4G15550.1 25.945 397 248 14 102 477 101 472 1.17e-27 115
Msa0996960 AT2G36790.1 25.697 502 302 18 4 466 6 475 1.43e-27 115
Msa0996960 AT2G28080.1 26.302 384 252 15 93 466 96 458 4.33e-27 114
Msa0996960 AT1G22370.2 23.457 405 281 10 11 402 13 401 4.86e-27 114
Msa0996960 AT2G43840.1 24.838 463 259 19 57 473 22 441 1.07e-26 112
Msa0996960 AT2G15490.3 26.789 489 317 16 11 477 7 476 1.42e-26 112
Msa0996960 AT2G43820.1 25.783 415 234 16 84 471 72 439 1.68e-26 112
Msa0996960 AT2G15490.1 26.978 493 314 17 11 477 7 479 3.37e-26 111
Msa0996960 AT2G43840.2 24.838 463 259 19 57 473 22 441 3.66e-26 111
Msa0996960 AT4G15490.1 24.017 483 328 16 10 477 7 465 7.00e-26 110
Msa0996960 AT3G46680.1 30.249 281 167 10 191 466 181 437 2.41e-25 108
Msa0996960 AT5G12890.1 28.669 293 186 10 184 464 184 465 2.69e-25 108
Msa0996960 AT5G05860.1 25.435 460 306 11 11 466 9 435 6.78e-25 107
Msa0996960 AT1G05530.1 25.673 483 287 19 11 466 5 442 9.57e-25 107
Msa0996960 AT5G38010.1 23.567 471 306 14 11 466 10 441 1.16e-24 106
Msa0996960 AT5G05880.1 25.902 471 292 18 11 466 8 436 1.89e-24 106
Msa0996960 AT1G24100.1 23.878 490 307 17 10 476 10 456 2.88e-24 105
Msa0996960 AT3G11340.1 24.625 467 278 15 21 466 19 432 2.99e-24 105
Msa0996960 AT4G01070.2 28.349 321 200 11 11 324 8 305 4.32e-24 103
Msa0996960 AT1G10400.1 30.147 272 146 10 209 464 204 447 5.90e-24 104
Msa0996960 AT3G46690.1 26.202 416 265 13 11 419 9 389 1.15e-23 103
Msa0996960 AT2G16890.3 23.788 433 299 10 11 434 9 419 1.48e-23 103
Msa0996960 AT3G46660.1 24.684 474 307 16 5 466 8 443 1.75e-23 103
Msa0996960 AT3G46700.1 24.249 466 301 16 11 466 9 432 1.75e-23 103
Msa0996960 AT4G15500.1 22.930 471 323 14 11 468 9 452 2.95e-23 102
Msa0996960 AT3G53150.1 25.577 520 287 25 11 477 22 494 3.50e-23 102
Msa0996960 AT3G55700.1 30.068 296 177 12 192 475 170 447 5.07e-23 102
Msa0996960 AT3G46670.1 29.615 260 162 9 211 466 194 436 6.26e-23 101
Msa0996960 AT2G26480.1 27.941 272 156 9 210 466 187 433 7.18e-23 101
Msa0996960 AT3G46650.1 23.126 467 306 14 11 473 10 427 9.42e-23 100
Msa0996960 AT5G49690.1 25.696 467 287 15 9 456 8 433 1.94e-22 100
Msa0996960 AT4G34135.1 32.530 249 137 10 209 442 210 442 5.83e-22 99.0
Msa0996960 AT5G05900.1 30.962 239 133 8 224 452 212 428 6.19e-22 98.6
Msa0996960 AT5G05870.1 25.852 352 206 12 137 466 124 442 3.71e-21 96.3
Msa0996960 AT5G05890.1 28.629 248 157 8 223 466 209 440 1.23e-20 94.7
Msa0996960 AT5G37950.1 25.581 344 228 11 58 393 20 343 1.31e-20 93.6
Msa0996960 AT5G37950.2 25.364 343 224 11 58 393 20 337 2.56e-20 92.4
Msa0996960 AT3G55710.1 25.275 455 278 15 9 443 6 418 3.49e-20 93.6
Msa0996960 AT1G22370.1 27.074 229 145 6 185 402 14 231 3.52e-20 91.7
Msa0996960 AT5G38040.1 24.197 467 290 18 21 474 20 435 1.46e-19 91.7
Msa0996960 AT5G65550.1 29.167 192 123 3 224 415 220 398 2.60e-19 90.9
Msa0996960 AT3G46720.1 24.731 465 296 16 11 466 9 428 1.73e-18 88.2
Msa0996960 AT5G17030.1 27.407 270 165 9 204 466 198 443 2.15e-18 88.2
Msa0996960 AT5G17040.1 27.444 266 170 7 204 466 182 427 3.67e-18 87.0
Msa0996960 AT2G22590.1 23.866 419 276 15 11 414 15 405 5.40e-18 87.0
Msa0996960 AT5G17040.2 27.178 287 184 8 185 466 59 325 1.59e-17 84.3
Msa0996960 AT5G17050.1 25.843 267 169 8 204 465 201 443 1.78e-17 85.1
Msa0996960 AT1G06000.1 27.799 259 160 9 222 466 176 421 2.13e-17 84.7
Msa0996960 AT3G02100.1 21.702 470 316 14 11 462 13 448 3.01e-15 78.2
Msa0996960 AT5G54010.1 29.143 175 110 4 275 445 245 409 3.51e-13 72.0
Msa0996960 AT1G30530.1 24.913 289 186 9 185 466 174 438 1.56e-12 69.7
Msa0996960 AT5G53990.1 31.183 186 109 6 280 456 244 419 5.66e-12 68.2
Msa0996960 AT3G22250.1 23.739 476 287 20 12 454 9 441 5.78e-12 68.2
Msa0996960 AT1G64910.1 26.168 214 134 7 252 456 221 419 8.66e-12 67.4
Msa0996960 AT2G22930.1 22.107 484 312 14 11 478 6 440 2.20e-11 66.2
Msa0996960 AT5G54060.1 26.415 159 108 3 251 408 243 393 4.87e-11 65.1
Msa0996960 AT4G27570.1 29.714 175 109 5 252 422 227 391 7.11e-11 64.7

Find 139 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAGTTAGAGAATGTATT+AGG 0.151164 6_4:+75883136 Msa0996960:CDS
TACAGAATCCGTGCAATTAT+TGG 0.191231 6_4:-75882945 None:intergenic
TTAACACCGTTGATCCATTT+TGG 0.214755 6_4:+75881303 Msa0996960:CDS
TTGCCTCCTGTTTATGCTAT+TGG 0.223283 6_4:+75881794 Msa0996960:CDS
AAAGGAGGTAATGAAGATTT+TGG 0.243217 6_4:-75881623 None:intergenic
TTGTTAGAATTGAAGGTAAA+AGG 0.247315 6_4:-75881361 None:intergenic
GTAGCTTTCCTTCCAAGTTC+TGG 0.265637 6_4:+75881083 Msa0996960:CDS
TCTCTTTGAAAAGATACTTA+TGG 0.292904 6_4:+75881664 Msa0996960:CDS
CATAAACCACTGACCCTTTA+GGG 0.302975 6_4:-75882988 None:intergenic
GCTGAATTATTTCTTCGTTA+TGG 0.307162 6_4:+75881137 Msa0996960:CDS
TGTTAGTTTGATTTCACCTT+TGG 0.311642 6_4:+75881433 Msa0996960:CDS
ACATAAACCACTGACCCTTT+AGG 0.314999 6_4:-75882989 None:intergenic
CCATGAAGCTTTCTAAGTTT+AGG 0.318503 6_4:-75881695 None:intergenic
TGTTTATGCTATTGGTCCTT+TGG 0.332059 6_4:+75881802 Msa0996960:CDS
GTTTCGAACTGAAGCCAAAA+TGG 0.334545 6_4:-75881317 None:intergenic
CAAATAAAAGATATGGCTAA+TGG 0.334800 6_4:+75883046 Msa0996960:CDS
GGGTTTGGCCAGAGGGGTGG+GGG 0.340197 6_4:+75883377 Msa0996960:CDS
TTAACTTGTGTCCTAAGGTT+TGG 0.344016 6_4:-75880946 None:intergenic
GGGGTTTGGCCAGAGGGGTG+GGG 0.344058 6_4:+75883376 Msa0996960:CDS
GCTAAAGAGACTGTTGGTTT+TGG 0.354828 6_4:-75881182 None:intergenic
AAGAGTTAGAGAATGTATTA+GGG 0.357828 6_4:+75883137 Msa0996960:CDS
AGGGTATGATTATAAACAAA+TGG 0.366656 6_4:+75883188 Msa0996960:CDS
TATGAACTCGTTTGAAGAAC+TGG 0.375617 6_4:+75881724 Msa0996960:CDS
TTCACCTTTGGTTTCCATCA+TGG 0.381575 6_4:+75881445 Msa0996960:CDS
CCTAAACTTAGAAAGCTTCA+TGG 0.389128 6_4:+75881695 Msa0996960:CDS
TTTGGTATTGGTGCAATTCC+AGG 0.398487 6_4:-75881605 None:intergenic
AATGATGGGAAAGTTGTTCC+TGG 0.408245 6_4:+75881770 Msa0996960:CDS
TTCCTTCCAAGTTCTGGTCT+AGG 0.410322 6_4:+75881089 Msa0996960:CDS
ATTCAATAGTAGAAGCTGTT+TGG 0.412964 6_4:+75883275 Msa0996960:CDS
GCGGGATCAAATAAAAGATA+TGG 0.413504 6_4:+75883039 Msa0996960:CDS
GTCAGTGGTTTATGTTTGCT+TGG 0.415089 6_4:+75882997 Msa0996960:CDS
AAACAAATGGGTAAATCAAA+TGG 0.416881 6_4:+75883201 Msa0996960:CDS
GATGAAGAAAGTGAATGAAA+AGG 0.423156 6_4:+75883168 Msa0996960:CDS
AAATAAAAGATATGGCTAAT+GGG 0.426060 6_4:+75883047 Msa0996960:CDS
ATGAAGAAAGTGAATGAAAA+GGG 0.437429 6_4:+75883169 Msa0996960:CDS
CTTGGTCACCCTGCAGTTGG+AGG 0.438371 6_4:+75883229 Msa0996960:CDS
GGGTATGATTATAAACAAAT+GGG 0.446782 6_4:+75883189 Msa0996960:CDS
TTCTATCATGGGCTCATGAT+GGG 0.449514 6_4:+75883311 Msa0996960:CDS
AGAAGCCTAGCTAGTGTAGA+TGG 0.449912 6_4:-75880996 None:intergenic
ATGGGAAGCCTATTCTATCA+TGG 0.449967 6_4:+75883299 Msa0996960:CDS
AGTGCAAATGAGTGGGGTGG+GGG 0.450758 6_4:+75883357 Msa0996960:CDS
GGCTTGATGAACACCCTAAA+GGG 0.455917 6_4:+75882975 Msa0996960:CDS
GTAAGCAAAATGTGGTGAAA+GGG 0.456990 6_4:+75883404 Msa0996960:CDS
TCAGTGGTTTATGTTTGCTT+GGG 0.464880 6_4:+75882998 Msa0996960:CDS
GCACTAGCTGCACTTAATGA+TGG 0.474158 6_4:+75881755 Msa0996960:CDS
AAAGGACCAATAGCATAAAC+AGG 0.476618 6_4:-75881800 None:intergenic
TCATGAGCCCATGATAGAAT+AGG 0.480353 6_4:-75883307 None:intergenic
GGGGTGGGGTAAGCAAAATG+TGG 0.480620 6_4:+75883396 Msa0996960:CDS
CGTTAATCGATGGATCTAAA+GGG 0.481591 6_4:-75881280 None:intergenic
TGATGAGTAATGAGTCTTTG+AGG 0.482439 6_4:+75883455 Msa0996960:CDS
ATCCTTGGTCACCCTGCAGT+TGG 0.484950 6_4:+75883226 Msa0996960:CDS
GTAGTGCAAATGAGTGGGGT+GGG 0.490371 6_4:+75883355 Msa0996960:CDS
ACGTTAATCGATGGATCTAA+AGG 0.492826 6_4:-75881281 None:intergenic
CTAAACTTAGAAAGCTTCAT+GGG 0.495099 6_4:+75881696 Msa0996960:CDS
ATTTGAGTGAGTTGAGATGA+AGG 0.495756 6_4:-75881242 None:intergenic
AATTCAGCTGTTCTTAGACA+TGG 0.502424 6_4:-75881122 None:intergenic
ATTCTATCATGGGCTCATGA+TGG 0.502557 6_4:+75883310 Msa0996960:CDS
AGAAAGGCTGCTAGTGTTGG+TGG 0.503115 6_4:+75883508 Msa0996960:CDS
TAGTGTTGGTGGGAGTATTG+AGG 0.509195 6_4:+75883519 Msa0996960:CDS
TGTGATTAAGAAACAAATTG+AGG 0.509528 6_4:+75883543 Msa0996960:CDS
TTGGTCACCCTGCAGTTGGA+GGG 0.511717 6_4:+75883230 Msa0996960:CDS
TTTACAAACCCTCCAACTGC+AGG 0.521239 6_4:-75883238 None:intergenic
AATGATGGAGGTAGCTAGAA+AGG 0.523676 6_4:+75883492 Msa0996960:CDS
TGGCTTGATGAACACCCTAA+AGG 0.526834 6_4:+75882974 Msa0996960:CDS
TAGTGCAAATGAGTGGGGTG+GGG 0.528842 6_4:+75883356 Msa0996960:CDS
GAGGGTTTGTAAATCATGGT+GGG 0.531433 6_4:+75883248 Msa0996960:CDS
CCGGAGGAGATCCAAACCTT+AGG 0.534117 6_4:+75880935 Msa0996960:five_prime_UTR
GAGTCTTTGAGGATCAAAGC+TGG 0.534951 6_4:+75883466 Msa0996960:CDS
AAGAAAGAAAACATTCTAGC+TGG 0.535713 6_4:-75881506 None:intergenic
CAGAAGTAGTGCAAATGAGT+GGG 0.536166 6_4:+75883350 Msa0996960:CDS
CCTAAGGTTTGGATCTCCTC+CGG 0.536711 6_4:-75880935 None:intergenic
AGATGACCTAGACCAGAACT+TGG 0.537951 6_4:-75881095 None:intergenic
GAAAGGGGAGGAGGTTTCAA+AGG 0.538092 6_4:+75883420 Msa0996960:CDS
GTAAATCAAATGGAGATCCT+TGG 0.538549 6_4:+75883211 Msa0996960:CDS
AAATGTGGTGAAAGGGGAGG+AGG 0.540045 6_4:+75883411 Msa0996960:CDS
GAAAGCTACATGAGCAACAA+AGG 0.542529 6_4:-75881069 None:intergenic
CAACTGCGTGGTGCAATCAC+CGG 0.542765 6_4:+75880916 Msa0996960:five_prime_UTR
GGTAAGCAAAATGTGGTGAA+AGG 0.544218 6_4:+75883403 Msa0996960:CDS
GCTATGAAATATATGTAGCT+AGG 0.544900 6_4:-75881482 None:intergenic
GTTGGAGGGTTTGTAAATCA+TGG 0.547417 6_4:+75883244 Msa0996960:CDS
CACTAGCTGCACTTAATGAT+GGG 0.550552 6_4:+75881756 Msa0996960:CDS
TAGTAGAAGCTGTTTGGCAT+GGG 0.551912 6_4:+75883281 Msa0996960:CDS
TAAGCAAAATGTGGTGAAAG+GGG 0.552227 6_4:+75883405 Msa0996960:CDS
TTGGTATTGGTGCAATTCCA+GGG 0.556801 6_4:-75881604 None:intergenic
GCGATGAAGCGATTGGCGAA+TGG 0.557845 6_4:-75881339 None:intergenic
GATTCAGCTAAAGAGACTGT+TGG 0.560544 6_4:-75881188 None:intergenic
TCAAATTCACATGGCACCAA+AGG 0.561584 6_4:-75881818 None:intergenic
TGGGAAGCCTATTCTATCAT+GGG 0.562073 6_4:+75883300 Msa0996960:CDS
ATAGTAGAAGCTGTTTGGCA+TGG 0.562550 6_4:+75883280 Msa0996960:CDS
ATGTGGTTACAAATTCTTGT+GGG 0.562579 6_4:+75883078 Msa0996960:CDS
ATTCACCATCTACACTAGCT+AGG 0.565504 6_4:+75880991 Msa0996960:five_prime_UTR
GCACGGATTCTGTATTGAAG+TGG 0.565894 6_4:+75882954 Msa0996960:CDS
GGTGATGCTGTTGAAATCCC+TGG 0.566508 6_4:+75881587 Msa0996960:CDS
GATCAAAGCTGGGAAAATGA+TGG 0.566938 6_4:+75883477 Msa0996960:CDS
TTAAGAAACAAATTGAGGAA+TGG 0.574166 6_4:+75883548 Msa0996960:CDS
ATGATGGGAAAGTTGTTCCT+GGG 0.576685 6_4:+75881771 Msa0996960:CDS
AAAGCTACATGAGCAACAAA+GGG 0.577163 6_4:-75881068 None:intergenic
TTTGAGTGAGTTGAGATGAA+GGG 0.579431 6_4:-75881241 None:intergenic
CTCCAACTGCAGGGTGACCA+AGG 0.583617 6_4:-75883228 None:intergenic
CTATTAGGTTGAAGAATCAA+AGG 0.583967 6_4:-75881641 None:intergenic
GCTAGAAAGGCTGCTAGTGT+TGG 0.590299 6_4:+75883505 Msa0996960:CDS
GTAAAAGGCGATGAAGCGAT+TGG 0.591194 6_4:-75881346 None:intergenic
TCAGAAGTAGTGCAAATGAG+TGG 0.592538 6_4:+75883349 Msa0996960:CDS
GAAAGGCTGCTAGTGTTGGT+GGG 0.593358 6_4:+75883509 Msa0996960:CDS
AGTAGTGCAAATGAGTGGGG+TGG 0.593716 6_4:+75883354 Msa0996960:CDS
AAACAAGACATGTACAAGGC+GGG 0.596907 6_4:+75883021 Msa0996960:CDS
ATGCTCAACCAATAATTGCA+CGG 0.600071 6_4:+75882937 Msa0996960:CDS
TCTATCATGGGCTCATGATG+GGG 0.601560 6_4:+75883312 Msa0996960:CDS
GGAGGGTTTGTAAATCATGG+TGG 0.601899 6_4:+75883247 Msa0996960:CDS
AGTCTTTGAGGATCAAAGCT+GGG 0.603386 6_4:+75883467 Msa0996960:CDS
CTGAAGCCAAAATGGATCAA+CGG 0.603763 6_4:-75881309 None:intergenic
GACCTAGACCAGAACTTGGA+AGG 0.607696 6_4:-75881091 None:intergenic
CTTGTGGGTGGTGAAATTGA+AGG 0.607810 6_4:+75883093 Msa0996960:CDS
GCATAAACAGGAGGCAACCC+AGG 0.607847 6_4:-75881788 None:intergenic
GGTAGTTGACAAGGACGAGG+AGG 0.621579 6_4:+75883114 Msa0996960:CDS
GGTGCCATGTGAATTTGAGA+AGG 0.621742 6_4:+75881823 Msa0996960:CDS
CTTTGAAAAGATACTTATGG+AGG 0.628694 6_4:+75881667 Msa0996960:CDS
ACGGTGTTAACGTTAATCGA+TGG 0.632038 6_4:-75881290 None:intergenic
GCTAATGGGTTAATATCATG+TGG 0.633115 6_4:+75883061 Msa0996960:CDS
TTACAAACCCTCCAACTGCA+GGG 0.639629 6_4:-75883237 None:intergenic
TGAACACCCTAAAGGGTCAG+TGG 0.641180 6_4:+75882982 Msa0996960:CDS
AAGAACAAAACTGAGTGATG+AGG 0.642879 6_4:-75881214 None:intergenic
GCAAAATGTGGTGAAAGGGG+AGG 0.643704 6_4:+75883408 Msa0996960:CDS
ATTGTCAAAATTCAACTGCG+TGG 0.644640 6_4:+75880904 Msa0996960:five_prime_UTR
TGGTTACAAATTCTTGTGGG+TGG 0.648709 6_4:+75883081 Msa0996960:CDS
CATGTGGTTACAAATTCTTG+TGG 0.650147 6_4:+75883077 Msa0996960:CDS
GGTTTGTAAATCATGGTGGG+TGG 0.661430 6_4:+75883251 Msa0996960:CDS
TCATAGATGAAAGCTGAGAG+AGG 0.663499 6_4:-75881410 None:intergenic
GAAGGTAGTTGACAAGGACG+AGG 0.668182 6_4:+75883111 Msa0996960:CDS
TGGGAAACAAGACATGTACA+AGG 0.670845 6_4:+75883017 Msa0996960:CDS
GGACCAATAGCATAAACAGG+AGG 0.676553 6_4:-75881797 None:intergenic
CTGCGTGGTGCAATCACCGG+AGG 0.682236 6_4:+75880919 Msa0996960:five_prime_UTR
GAAATTGAAGGTAGTTGACA+AGG 0.683560 6_4:+75883105 Msa0996960:CDS
CAAAGCTGGGAAAATGATGG+AGG 0.685629 6_4:+75883480 Msa0996960:CDS
TTAGGTTGAAGAATCAAAGG+AGG 0.687566 6_4:-75881638 None:intergenic
AGAAGTAGTGCAAATGAGTG+GGG 0.689093 6_4:+75883351 Msa0996960:CDS
TGAACCTTCTCAAATTCACA+TGG 0.696635 6_4:-75881827 None:intergenic
TAGATGAAAGCTGAGAGAGG+TGG 0.697333 6_4:-75881407 None:intergenic
GAAACAAGACATGTACAAGG+CGG 0.744799 6_4:+75883020 Msa0996960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAATAAATACTTATA+GGG - chr6_4:75882275-75882294 None:intergenic 10.0%
!! AAAAATATTTCATCAAATAA+TGG - chr6_4:75882498-75882517 None:intergenic 10.0%
!!! TTTGATGAAATATTTTTAAA+AGG + chr6_4:75882501-75882520 Msa0996960:intron 10.0%
!!! AAGATAAAACTTGAAAATTT+TGG + chr6_4:75882000-75882019 Msa0996960:intron 15.0%
!!! AATTTAAGATGATTTATGTT+TGG - chr6_4:75882061-75882080 None:intergenic 15.0%
!! GAGGAATTAAATATAAAAAT+TGG - chr6_4:75882228-75882247 None:intergenic 15.0%
!! CTCAAAAAATAAATACTTAT+AGG - chr6_4:75882276-75882295 None:intergenic 15.0%
!!! ATAAAAGTTGATATATTTAG+AGG + chr6_4:75882531-75882550 Msa0996960:intron 15.0%
!!! TAAAAGTTGATATATTTAGA+GGG + chr6_4:75882532-75882551 Msa0996960:intron 15.0%
!!! ATCATGTAAGTCATTTTTAA+AGG + chr6_4:75882171-75882190 Msa0996960:intron 20.0%
!!! TCATGTAAGTCATTTTTAAA+GGG + chr6_4:75882172-75882191 Msa0996960:intron 20.0%
!! TGAAGACAATAATACTTATA+GGG - chr6_4:75882303-75882322 None:intergenic 20.0%
!! TTGAAGACAATAATACTTAT+AGG - chr6_4:75882304-75882323 None:intergenic 20.0%
!! AGTATTATTGTCTTCAAAAT+TGG + chr6_4:75882307-75882326 Msa0996960:intron 20.0%
!!! ATTTTTGTCTTCATAAACTA+TGG - chr6_4:75882599-75882618 None:intergenic 20.0%
!! AAAGACAATGAAAATTTAGA+AGG + chr6_4:75882666-75882685 Msa0996960:intron 20.0%
!! AAATAAAAGATATGGCTAAT+GGG + chr6_4:75883047-75883066 Msa0996960:CDS 20.0%
!!! AAATTTTAACTTGTGTCCTA+AGG - chr6_4:75880954-75880973 None:intergenic 25.0%
! TTGTTAGAATTGAAGGTAAA+AGG - chr6_4:75881364-75881383 None:intergenic 25.0%
!!! GAAAGTTTTGTTAGAATTGA+AGG - chr6_4:75881371-75881390 None:intergenic 25.0%
!! AAAAGAGAAATTTTCCATGA+TGG - chr6_4:75881462-75881481 None:intergenic 25.0%
!! ATCTTTTCAAAGAGACTATT+AGG - chr6_4:75881659-75881678 None:intergenic 25.0%
!! TCTCTTTGAAAAGATACTTA+TGG + chr6_4:75881664-75881683 Msa0996960:CDS 25.0%
! TTTACTCTATTTCACTTATG+TGG + chr6_4:75881882-75881901 Msa0996960:intron 25.0%
! TAAGATGATTTATGTTTGGT+AGG - chr6_4:75882057-75882076 None:intergenic 25.0%
!! GCTTTTATTAATGGAGTTAT+CGG - chr6_4:75882339-75882358 None:intergenic 25.0%
! CAATTAAATTAGCAACATGT+AGG + chr6_4:75882402-75882421 Msa0996960:intron 25.0%
!!! AACTTTACCATCTTTAAAGT+TGG - chr6_4:75882468-75882487 None:intergenic 25.0%
!! TTAAAGATGGTAAAGTTTTG+AGG + chr6_4:75882471-75882490 Msa0996960:intron 25.0%
! TTTCTGTCTTTATAAACCAA+TGG - chr6_4:75882647-75882666 None:intergenic 25.0%
! TGCTTATATATTATTCCGAA+AGG - chr6_4:75882770-75882789 None:intergenic 25.0%
!! CTTTTGCTTATATTTCATTC+AGG + chr6_4:75882853-75882872 Msa0996960:intron 25.0%
! TTTGTCTTTGTCTAATATGT+AGG + chr6_4:75882910-75882929 Msa0996960:intron 25.0%
! CAAATAAAAGATATGGCTAA+TGG + chr6_4:75883046-75883065 Msa0996960:CDS 25.0%
! AAGAGTTAGAGAATGTATTA+GGG + chr6_4:75883137-75883156 Msa0996960:CDS 25.0%
! ATGAAGAAAGTGAATGAAAA+GGG + chr6_4:75883169-75883188 Msa0996960:CDS 25.0%
! AGGGTATGATTATAAACAAA+TGG + chr6_4:75883188-75883207 Msa0996960:CDS 25.0%
! GGGTATGATTATAAACAAAT+GGG + chr6_4:75883189-75883208 Msa0996960:CDS 25.0%
! AAACAAATGGGTAAATCAAA+TGG + chr6_4:75883201-75883220 Msa0996960:CDS 25.0%
! TGTGATTAAGAAACAAATTG+AGG + chr6_4:75883543-75883562 Msa0996960:CDS 25.0%
! TTAAGAAACAAATTGAGGAA+TGG + chr6_4:75883548-75883567 Msa0996960:CDS 25.0%
!! GAATGGAAAATGAATTTTCA+AGG + chr6_4:75883565-75883584 Msa0996960:CDS 25.0%
!!! ACATTGTTAGTTTTGCTATG+TGG - chr6_4:75881034-75881053 None:intergenic 30.0%
! GCTGAATTATTTCTTCGTTA+TGG + chr6_4:75881137-75881156 Msa0996960:CDS 30.0%
! TGTTAGTTTGATTTCACCTT+TGG + chr6_4:75881433-75881452 Msa0996960:CDS 30.0%
GCTATGAAATATATGTAGCT+AGG - chr6_4:75881485-75881504 None:intergenic 30.0%
AAGAAAGAAAACATTCTAGC+TGG - chr6_4:75881509-75881528 None:intergenic 30.0%
! GCTAAACATTTTTCATGCAT+TGG + chr6_4:75881566-75881585 Msa0996960:CDS 30.0%
!! GGTAATGAAGATTTTGGTAT+TGG - chr6_4:75881620-75881639 None:intergenic 30.0%
! AAAGGAGGTAATGAAGATTT+TGG - chr6_4:75881626-75881645 None:intergenic 30.0%
!! CTATTAGGTTGAAGAATCAA+AGG - chr6_4:75881644-75881663 None:intergenic 30.0%
! CTTTGAAAAGATACTTATGG+AGG + chr6_4:75881667-75881686 Msa0996960:CDS 30.0%
CTAAACTTAGAAAGCTTCAT+GGG + chr6_4:75881696-75881715 Msa0996960:CDS 30.0%
TTCATGTCTCACTAAAACTT+TGG + chr6_4:75881846-75881865 Msa0996960:intron 30.0%
! TACTTGATGGAAAGTTTTTG+AGG - chr6_4:75882247-75882266 None:intergenic 30.0%
! TTATAGGGATTGTTACTTGA+TGG - chr6_4:75882260-75882279 None:intergenic 30.0%
TTATTAATGGAGTTATCGGT+GGG - chr6_4:75882335-75882354 None:intergenic 30.0%
TTTATTAATGGAGTTATCGG+TGG - chr6_4:75882336-75882355 None:intergenic 30.0%
TTTATAAACCAATGGCAAGT+TGG - chr6_4:75882639-75882658 None:intergenic 30.0%
ATGCATACACTTTATGATGT+TGG - chr6_4:75882738-75882757 None:intergenic 30.0%
ATGCATACATATACTCCTTT+CGG + chr6_4:75882752-75882771 Msa0996960:intron 30.0%
TTAGACAAAGACAAAAGCTT+AGG - chr6_4:75882905-75882924 None:intergenic 30.0%
ATGTGGTTACAAATTCTTGT+GGG + chr6_4:75883078-75883097 Msa0996960:CDS 30.0%
GAAGAGTTAGAGAATGTATT+AGG + chr6_4:75883136-75883155 Msa0996960:CDS 30.0%
GATGAAGAAAGTGAATGAAA+AGG + chr6_4:75883168-75883187 Msa0996960:CDS 30.0%
ATTCAATAGTAGAAGCTGTT+TGG + chr6_4:75883275-75883294 Msa0996960:CDS 30.0%
ATTGTCAAAATTCAACTGCG+TGG + chr6_4:75880904-75880923 Msa0996960:five_prime_UTR 35.0%
!! TTAACTTGTGTCCTAAGGTT+TGG - chr6_4:75880949-75880968 None:intergenic 35.0%
AAAGCTACATGAGCAACAAA+GGG - chr6_4:75881071-75881090 None:intergenic 35.0%
AATTCAGCTGTTCTTAGACA+TGG - chr6_4:75881125-75881144 None:intergenic 35.0%
AAGAACAAAACTGAGTGATG+AGG - chr6_4:75881217-75881236 None:intergenic 35.0%
! TTTGAGTGAGTTGAGATGAA+GGG - chr6_4:75881244-75881263 None:intergenic 35.0%
! ATTTGAGTGAGTTGAGATGA+AGG - chr6_4:75881245-75881264 None:intergenic 35.0%
CGTTAATCGATGGATCTAAA+GGG - chr6_4:75881283-75881302 None:intergenic 35.0%
ACGTTAATCGATGGATCTAA+AGG - chr6_4:75881284-75881303 None:intergenic 35.0%
! TTAACACCGTTGATCCATTT+TGG + chr6_4:75881303-75881322 Msa0996960:CDS 35.0%
!! TTTTCCATGATGGAAACCAA+AGG - chr6_4:75881452-75881471 None:intergenic 35.0%
!! TTAGGTTGAAGAATCAAAGG+AGG - chr6_4:75881641-75881660 None:intergenic 35.0%
CCATGAAGCTTTCTAAGTTT+AGG - chr6_4:75881698-75881717 None:intergenic 35.0%
CCTAAACTTAGAAAGCTTCA+TGG + chr6_4:75881695-75881714 Msa0996960:CDS 35.0%
TATGAACTCGTTTGAAGAAC+TGG + chr6_4:75881724-75881743 Msa0996960:CDS 35.0%
AAAGGACCAATAGCATAAAC+AGG - chr6_4:75881803-75881822 None:intergenic 35.0%
TGTTTATGCTATTGGTCCTT+TGG + chr6_4:75881802-75881821 Msa0996960:CDS 35.0%
TGAACCTTCTCAAATTCACA+TGG - chr6_4:75881830-75881849 None:intergenic 35.0%
TATTAATGGAGTTATCGGTG+GGG - chr6_4:75882334-75882353 None:intergenic 35.0%
! GTCACGTCAGCTTTTATTAA+TGG - chr6_4:75882348-75882367 None:intergenic 35.0%
! TCAGAGTCCAACTTTAAAGA+TGG + chr6_4:75882458-75882477 Msa0996960:intron 35.0%
! ATGATGTTGGTCATGTGTTT+TGG - chr6_4:75882725-75882744 None:intergenic 35.0%
! TTTCATTCAGGAGAGAGTAT+TGG + chr6_4:75882865-75882884 Msa0996960:intron 35.0%
ATGCTCAACCAATAATTGCA+CGG + chr6_4:75882937-75882956 Msa0996960:CDS 35.0%
TACAGAATCCGTGCAATTAT+TGG - chr6_4:75882948-75882967 None:intergenic 35.0%
TCAGTGGTTTATGTTTGCTT+GGG + chr6_4:75882998-75883017 Msa0996960:CDS 35.0%
GCGGGATCAAATAAAAGATA+TGG + chr6_4:75883039-75883058 Msa0996960:CDS 35.0%
!! GCTAATGGGTTAATATCATG+TGG + chr6_4:75883061-75883080 Msa0996960:CDS 35.0%
CATGTGGTTACAAATTCTTG+TGG + chr6_4:75883077-75883096 Msa0996960:CDS 35.0%
GAAATTGAAGGTAGTTGACA+AGG + chr6_4:75883105-75883124 Msa0996960:CDS 35.0%
GTAAATCAAATGGAGATCCT+TGG + chr6_4:75883211-75883230 Msa0996960:CDS 35.0%
GTAAGCAAAATGTGGTGAAA+GGG + chr6_4:75883404-75883423 Msa0996960:CDS 35.0%
TAAGCAAAATGTGGTGAAAG+GGG + chr6_4:75883405-75883424 Msa0996960:CDS 35.0%
TGATGAGTAATGAGTCTTTG+AGG + chr6_4:75883455-75883474 Msa0996960:CDS 35.0%
ATTCACCATCTACACTAGCT+AGG + chr6_4:75880991-75881010 Msa0996960:five_prime_UTR 40.0%
GAAAGCTACATGAGCAACAA+AGG - chr6_4:75881072-75881091 None:intergenic 40.0%
!!! GCTAAAGAGACTGTTGGTTT+TGG - chr6_4:75881185-75881204 None:intergenic 40.0%
GATTCAGCTAAAGAGACTGT+TGG - chr6_4:75881191-75881210 None:intergenic 40.0%
! ACGGTGTTAACGTTAATCGA+TGG - chr6_4:75881293-75881312 None:intergenic 40.0%
CTGAAGCCAAAATGGATCAA+CGG - chr6_4:75881312-75881331 None:intergenic 40.0%
GTTTCGAACTGAAGCCAAAA+TGG - chr6_4:75881320-75881339 None:intergenic 40.0%
TCATAGATGAAAGCTGAGAG+AGG - chr6_4:75881413-75881432 None:intergenic 40.0%
! TTCACCTTTGGTTTCCATCA+TGG + chr6_4:75881445-75881464 Msa0996960:CDS 40.0%
!! TTGGTATTGGTGCAATTCCA+GGG - chr6_4:75881607-75881626 None:intergenic 40.0%
!! TTTGGTATTGGTGCAATTCC+AGG - chr6_4:75881608-75881627 None:intergenic 40.0%
CACTAGCTGCACTTAATGAT+GGG + chr6_4:75881756-75881775 Msa0996960:CDS 40.0%
! AATGATGGGAAAGTTGTTCC+TGG + chr6_4:75881770-75881789 Msa0996960:CDS 40.0%
! ATGATGGGAAAGTTGTTCCT+GGG + chr6_4:75881771-75881790 Msa0996960:CDS 40.0%
TTGCCTCCTGTTTATGCTAT+TGG + chr6_4:75881794-75881813 Msa0996960:CDS 40.0%
TCAAATTCACATGGCACCAA+AGG - chr6_4:75881821-75881840 None:intergenic 40.0%
CTCATTAACAGAAGCTGACA+TGG - chr6_4:75882430-75882449 None:intergenic 40.0%
AGACATAACCAACTTGCCAT+TGG + chr6_4:75882628-75882647 Msa0996960:intron 40.0%
!!! TGTTTTGGTGCTCAACACAT+TGG - chr6_4:75882710-75882729 None:intergenic 40.0%
CATAAACCACTGACCCTTTA+GGG - chr6_4:75882991-75883010 None:intergenic 40.0%
ACATAAACCACTGACCCTTT+AGG - chr6_4:75882992-75883011 None:intergenic 40.0%
GTCAGTGGTTTATGTTTGCT+TGG + chr6_4:75882997-75883016 Msa0996960:CDS 40.0%
TGGGAAACAAGACATGTACA+AGG + chr6_4:75883017-75883036 Msa0996960:CDS 40.0%
GAAACAAGACATGTACAAGG+CGG + chr6_4:75883020-75883039 Msa0996960:CDS 40.0%
AAACAAGACATGTACAAGGC+GGG + chr6_4:75883021-75883040 Msa0996960:CDS 40.0%
TGGTTACAAATTCTTGTGGG+TGG + chr6_4:75883081-75883100 Msa0996960:CDS 40.0%
GTTGGAGGGTTTGTAAATCA+TGG + chr6_4:75883244-75883263 Msa0996960:CDS 40.0%
GAGGGTTTGTAAATCATGGT+GGG + chr6_4:75883248-75883267 Msa0996960:CDS 40.0%
ATAGTAGAAGCTGTTTGGCA+TGG + chr6_4:75883280-75883299 Msa0996960:CDS 40.0%
TAGTAGAAGCTGTTTGGCAT+GGG + chr6_4:75883281-75883300 Msa0996960:CDS 40.0%
ATGGGAAGCCTATTCTATCA+TGG + chr6_4:75883299-75883318 Msa0996960:CDS 40.0%
TGGGAAGCCTATTCTATCAT+GGG + chr6_4:75883300-75883319 Msa0996960:CDS 40.0%
TCATGAGCCCATGATAGAAT+AGG - chr6_4:75883310-75883329 None:intergenic 40.0%
ATTCTATCATGGGCTCATGA+TGG + chr6_4:75883310-75883329 Msa0996960:CDS 40.0%
TTCTATCATGGGCTCATGAT+GGG + chr6_4:75883311-75883330 Msa0996960:CDS 40.0%
TCAGAAGTAGTGCAAATGAG+TGG + chr6_4:75883349-75883368 Msa0996960:CDS 40.0%
CAGAAGTAGTGCAAATGAGT+GGG + chr6_4:75883350-75883369 Msa0996960:CDS 40.0%
AGAAGTAGTGCAAATGAGTG+GGG + chr6_4:75883351-75883370 Msa0996960:CDS 40.0%
GGTAAGCAAAATGTGGTGAA+AGG + chr6_4:75883403-75883422 Msa0996960:CDS 40.0%
! AGTCTTTGAGGATCAAAGCT+GGG + chr6_4:75883467-75883486 Msa0996960:CDS 40.0%
GATCAAAGCTGGGAAAATGA+TGG + chr6_4:75883477-75883496 Msa0996960:CDS 40.0%
! AATGATGGAGGTAGCTAGAA+AGG + chr6_4:75883492-75883511 Msa0996960:CDS 40.0%
AGAAGCCTAGCTAGTGTAGA+TGG - chr6_4:75880999-75881018 None:intergenic 45.0%
GTAGCTTTCCTTCCAAGTTC+TGG + chr6_4:75881083-75881102 Msa0996960:CDS 45.0%
! TTCCTTCCAAGTTCTGGTCT+AGG + chr6_4:75881089-75881108 Msa0996960:CDS 45.0%
AGATGACCTAGACCAGAACT+TGG - chr6_4:75881098-75881117 None:intergenic 45.0%
GTAAAAGGCGATGAAGCGAT+TGG - chr6_4:75881349-75881368 None:intergenic 45.0%
TAGATGAAAGCTGAGAGAGG+TGG - chr6_4:75881410-75881429 None:intergenic 45.0%
GCACTAGCTGCACTTAATGA+TGG + chr6_4:75881755-75881774 Msa0996960:CDS 45.0%
GGACCAATAGCATAAACAGG+AGG - chr6_4:75881800-75881819 None:intergenic 45.0%
! GGTGCCATGTGAATTTGAGA+AGG + chr6_4:75881823-75881842 Msa0996960:CDS 45.0%
GCACGGATTCTGTATTGAAG+TGG + chr6_4:75882954-75882973 Msa0996960:CDS 45.0%
TGGCTTGATGAACACCCTAA+AGG + chr6_4:75882974-75882993 Msa0996960:CDS 45.0%
GGCTTGATGAACACCCTAAA+GGG + chr6_4:75882975-75882994 Msa0996960:CDS 45.0%
CTTGTGGGTGGTGAAATTGA+AGG + chr6_4:75883093-75883112 Msa0996960:CDS 45.0%
TTACAAACCCTCCAACTGCA+GGG - chr6_4:75883240-75883259 None:intergenic 45.0%
TTTACAAACCCTCCAACTGC+AGG - chr6_4:75883241-75883260 None:intergenic 45.0%
GGAGGGTTTGTAAATCATGG+TGG + chr6_4:75883247-75883266 Msa0996960:CDS 45.0%
! GGTTTGTAAATCATGGTGGG+TGG + chr6_4:75883251-75883270 Msa0996960:CDS 45.0%
TCTATCATGGGCTCATGATG+GGG + chr6_4:75883312-75883331 Msa0996960:CDS 45.0%
! GAGTCTTTGAGGATCAAAGC+TGG + chr6_4:75883466-75883485 Msa0996960:CDS 45.0%
CAAAGCTGGGAAAATGATGG+AGG + chr6_4:75883480-75883499 Msa0996960:CDS 45.0%
!! TAGTGTTGGTGGGAGTATTG+AGG + chr6_4:75883519-75883538 Msa0996960:CDS 45.0%
CCTAAGGTTTGGATCTCCTC+CGG - chr6_4:75880938-75880957 None:intergenic 50.0%
GACCTAGACCAGAACTTGGA+AGG - chr6_4:75881094-75881113 None:intergenic 50.0%
GGTGATGCTGTTGAAATCCC+TGG + chr6_4:75881587-75881606 Msa0996960:CDS 50.0%
TGAACACCCTAAAGGGTCAG+TGG + chr6_4:75882982-75883001 Msa0996960:CDS 50.0%
GAAGGTAGTTGACAAGGACG+AGG + chr6_4:75883111-75883130 Msa0996960:CDS 50.0%
AGTAGTGCAAATGAGTGGGG+TGG + chr6_4:75883354-75883373 Msa0996960:CDS 50.0%
GTAGTGCAAATGAGTGGGGT+GGG + chr6_4:75883355-75883374 Msa0996960:CDS 50.0%
TAGTGCAAATGAGTGGGGTG+GGG + chr6_4:75883356-75883375 Msa0996960:CDS 50.0%
GCAAAATGTGGTGAAAGGGG+AGG + chr6_4:75883408-75883427 Msa0996960:CDS 50.0%
AAATGTGGTGAAAGGGGAGG+AGG + chr6_4:75883411-75883430 Msa0996960:CDS 50.0%
GAAAGGGGAGGAGGTTTCAA+AGG + chr6_4:75883420-75883439 Msa0996960:CDS 50.0%
GCTAGAAAGGCTGCTAGTGT+TGG + chr6_4:75883505-75883524 Msa0996960:CDS 50.0%
! AGAAAGGCTGCTAGTGTTGG+TGG + chr6_4:75883508-75883527 Msa0996960:CDS 50.0%
!! GAAAGGCTGCTAGTGTTGGT+GGG + chr6_4:75883509-75883528 Msa0996960:CDS 50.0%
CAACTGCGTGGTGCAATCAC+CGG + chr6_4:75880916-75880935 Msa0996960:five_prime_UTR 55.0%
CCGGAGGAGATCCAAACCTT+AGG + chr6_4:75880935-75880954 Msa0996960:five_prime_UTR 55.0%
GCGATGAAGCGATTGGCGAA+TGG - chr6_4:75881342-75881361 None:intergenic 55.0%
GCATAAACAGGAGGCAACCC+AGG - chr6_4:75881791-75881810 None:intergenic 55.0%
GGTAGTTGACAAGGACGAGG+AGG + chr6_4:75883114-75883133 Msa0996960:CDS 55.0%
ATCCTTGGTCACCCTGCAGT+TGG + chr6_4:75883226-75883245 Msa0996960:CDS 55.0%
TTGGTCACCCTGCAGTTGGA+GGG + chr6_4:75883230-75883249 Msa0996960:CDS 55.0%
AGTGCAAATGAGTGGGGTGG+GGG + chr6_4:75883357-75883376 Msa0996960:CDS 55.0%
AAATGAGTGGGGTGGGGGTT+TGG + chr6_4:75883362-75883381 Msa0996960:CDS 55.0%
GGGGTGGGGTAAGCAAAATG+TGG + chr6_4:75883396-75883415 Msa0996960:CDS 55.0%
CTCCAACTGCAGGGTGACCA+AGG - chr6_4:75883231-75883250 None:intergenic 60.0%
CTTGGTCACCCTGCAGTTGG+AGG + chr6_4:75883229-75883248 Msa0996960:CDS 60.0%
CTGCGTGGTGCAATCACCGG+AGG + chr6_4:75880919-75880938 Msa0996960:five_prime_UTR 65.0%
TGGGGTGGGGGTTTGGCCAG+AGG + chr6_4:75883369-75883388 Msa0996960:CDS 70.0%
GGGGTGGGGGTTTGGCCAGA+GGG + chr6_4:75883370-75883389 Msa0996960:CDS 70.0%
GGGTGGGGGTTTGGCCAGAG+GGG + chr6_4:75883371-75883390 Msa0996960:CDS 70.0%
TGGGGGTTTGGCCAGAGGGG+TGG + chr6_4:75883374-75883393 Msa0996960:CDS 70.0%
GGGGGTTTGGCCAGAGGGGT+GGG + chr6_4:75883375-75883394 Msa0996960:CDS 70.0%
GGGGTTTGGCCAGAGGGGTG+GGG + chr6_4:75883376-75883395 Msa0996960:CDS 70.0%
GGGTTTGGCCAGAGGGGTGG+GGG + chr6_4:75883377-75883396 Msa0996960:CDS 70.0%
TTTGGCCAGAGGGGTGGGGG+TGG + chr6_4:75883380-75883399 Msa0996960:CDS 70.0%
TTGGCCAGAGGGGTGGGGGT+GGG + chr6_4:75883381-75883400 Msa0996960:CDS 70.0%
TTACCCCACCCCCACCCCTC+TGG - chr6_4:75883388-75883407 None:intergenic 70.0%
TGGCCAGAGGGGTGGGGGTG+GGG + chr6_4:75883382-75883401 Msa0996960:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 75880843 75883594 75880843 ID=Msa0996960;Name=Msa0996960
chr6_4 mRNA 75880843 75883594 75880843 ID=Msa0996960-mRNA-1;Parent=Msa0996960;Name=Msa0996960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=207|1|0.5|1|1|1|2|0|485
chr6_4 exon 75880843 75881844 75880843 ID=Msa0996960-mRNA-1:exon:14207;Parent=Msa0996960-mRNA-1
chr6_4 exon 75882932 75883594 75882932 ID=Msa0996960-mRNA-1:exon:14208;Parent=Msa0996960-mRNA-1
chr6_4 five_prime_UTR 75880843 75881049 75880843 ID=Msa0996960-mRNA-1:five_prime_utr;Parent=Msa0996960-mRNA-1
chr6_4 CDS 75881050 75881844 75881050 ID=Msa0996960-mRNA-1:cds;Parent=Msa0996960-mRNA-1
chr6_4 CDS 75882932 75883594 75882932 ID=Msa0996960-mRNA-1:cds;Parent=Msa0996960-mRNA-1
Gene Sequence

>Msa0996960

ATGTCTTCTTCAGATGATCCCTTTGTTGCTCATGTAGCTTTCCTTCCAAGTTCTGGTCTAGGTCATCTCAATCCATGTCTAAGAACAGCTGAATTATTTCTTCGTTATGGCTGCAAAATCACTCTCATCACACCAAAACCAACAGTCTCTTTAGCTGAATCAGACCTCATCACTCAGTTTTGTTCTTCTTTCCCTTCATCTCAACTCACTCAAATAGACTTAAATCTCATCCCTTTAGATCCATCGATTAACGTTAACACCGTTGATCCATTTTGGCTTCAGTTCGAAACCATTCGCCAATCGCTTCATCGCCTTTTACCTTCAATTCTAACAAAACTTTCATCTTCATCATCATCACCACCTCTCTCAGCTTTCATCTATGATGTTAGTTTGATTTCACCTTTGGTTTCCATCATGGAAAATTTCTCTTTTCCTAGCTACATATATTTCATAGCACCAGCTAGAATGTTTTCTTTCTTTGCATATCTATCTGTTCTTTCTGAGAAAAGCAATGATGCTAAACATTTTTCATGCATTGGTGATGCTGTTGAAATCCCTGGAATTGCACCAATACCAAAATCTTCATTACCTCCTTTGATTCTTCAACCTAATAGTCTCTTTGAAAAGATACTTATGGAGGATAGTCCTAAACTTAGAAAGCTTCATGGGATTTTTATGAACTCGTTTGAAGAACTGGAAGCTGAAGCACTAGCTGCACTTAATGATGGGAAAGTTGTTCCTGGGTTGCCTCCTGTTTATGCTATTGGTCCTTTGGTGCCATGTGAATTTGAGAAGGTACGATGCTCAACCAATAATTGCACGGATTCTGTATTGAAGTGGCTTGATGAACACCCTAAAGGGTCAGTGGTTTATGTTTGCTTGGGAAACAAGACATGTACAAGGCGGGATCAAATAAAAGATATGGCTAATGGGTTAATATCATGTGGTTACAAATTCTTGTGGGTGGTGAAATTGAAGGTAGTTGACAAGGACGAGGAGGAAGAGTTAGAGAATGTATTAGGGAATGAGATGATGAAGAAAGTGAATGAAAAGGGTATGATTATAAACAAATGGGTAAATCAAATGGAGATCCTTGGTCACCCTGCAGTTGGAGGGTTTGTAAATCATGGTGGGTGGAATTCAATAGTAGAAGCTGTTTGGCATGGGAAGCCTATTCTATCATGGGCTCATGATGGGGATCAAAAGATAGCTTCAGAAGTAGTGCAAATGAGTGGGGTGGGGGTTTGGCCAGAGGGGTGGGGGTGGGGTAAGCAAAATGTGGTGAAAGGGGAGGAGGTTTCAAAGGTAATTAAAGAGATGATGAGTAATGAGTCTTTGAGGATCAAAGCTGGGAAAATGATGGAGGTAGCTAGAAAGGCTGCTAGTGTTGGTGGGAGTATTGAGGTTGTGATTAAGAAACAAATTGAGGAATGGAAAATGAATTTTCAAGGCATATAA

Protein sequence

>Msa0996960

MSSSDDPFVAHVAFLPSSGLGHLNPCLRTAELFLRYGCKITLITPKPTVSLAESDLITQFCSSFPSSQLTQIDLNLIPLDPSINVNTVDPFWLQFETIRQSLHRLLPSILTKLSSSSSSPPLSAFIYDVSLISPLVSIMENFSFPSYIYFIAPARMFSFFAYLSVLSEKSNDAKHFSCIGDAVEIPGIAPIPKSSLPPLILQPNSLFEKILMEDSPKLRKLHGIFMNSFEELEAEALAALNDGKVVPGLPPVYAIGPLVPCEFEKVRCSTNNCTDSVLKWLDEHPKGSVVYVCLGNKTCTRRDQIKDMANGLISCGYKFLWVVKLKVVDKDEEEELENVLGNEMMKKVNEKGMIINKWVNQMEILGHPAVGGFVNHGGWNSIVEAVWHGKPILSWAHDGDQKIASEVVQMSGVGVWPEGWGWGKQNVVKGEEVSKVIKEMMSNESLRIKAGKMMEVARKAASVGGSIEVVIKKQIEEWKMNFQGI*