AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1169710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169710 MtrunA17_Chr7g0262941 97.015 268 8 0 1 268 1 268 0.0 538
Msa1169710 MtrunA17_Chr1g0182541 83.955 268 42 1 1 268 1 267 5.06e-169 470
Msa1169710 MtrunA17_Chr8g0386971 58.140 258 107 1 10 267 5 261 1.50e-103 304
Msa1169710 MtrunA17_Chr1g0202891 58.594 256 105 1 13 268 8 262 2.42e-102 301
Msa1169710 MtrunA17_Chr1g0202931 58.203 256 106 1 13 268 8 262 6.12e-102 300
Msa1169710 MtrunA17_Chr1g0202871 57.812 256 107 1 13 268 8 262 1.65e-101 298
Msa1169710 MtrunA17_Chr1g0202861 57.422 256 108 1 13 268 49 303 1.36e-100 298
Msa1169710 MtrunA17_Chr6g0470501 56.420 257 108 2 15 268 37 292 1.44e-91 274
Msa1169710 MtrunA17_Chr6g0470321 59.336 241 96 2 14 253 17 256 1.89e-91 273
Msa1169710 MtrunA17_Chr8g0388831 48.188 276 130 4 1 268 1 271 1.98e-78 240
Msa1169710 MtrunA17_Chr4g0058731 49.597 248 121 2 1 245 12 258 2.34e-76 236
Msa1169710 MtrunA17_Chr3g0117241 51.948 154 71 1 1 151 1 154 3.70e-46 152
Msa1169710 MtrunA17_Chr2g0317921 33.716 261 126 9 36 263 88 334 1.68e-24 101
Msa1169710 MtrunA17_Chr6g0481311 33.471 242 136 7 33 259 60 291 7.80e-24 99.4
Msa1169710 MtrunA17_Chr3g0117251 46.809 94 49 1 152 245 1 93 9.98e-23 92.0
Msa1169710 MtrunA17_Chr6g0466681 26.829 205 140 3 38 242 70 264 1.57e-17 81.3
Msa1169710 MtrunA17_Chr6g0469251 28.311 219 135 5 42 245 14 225 2.83e-15 74.3
Msa1169710 MtrunA17_Chr1g0202911 46.970 66 35 0 38 103 4 69 1.03e-12 62.8
Msa1169710 MtrunA17_Chr3g0079561 27.551 196 120 5 77 257 5 193 5.53e-12 64.3
Msa1169710 MtrunA17_Chr7g0267881 30.814 172 103 5 37 202 11 172 5.51e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169710 AT2G37540.1 66.292 267 89 1 2 268 1 266 3.92e-133 379
Msa1169710 AT2G37540.2 68.400 250 78 1 2 251 1 249 3.75e-127 362
Msa1169710 AT5G02540.1 67.416 267 86 1 2 268 1 266 6.24e-125 359
Msa1169710 AT4G23430.2 58.846 260 105 2 10 268 5 263 8.22e-108 315
Msa1169710 AT4G11410.1 58.594 256 105 1 13 268 8 262 6.04e-106 310
Msa1169710 AT4G23420.5 58.301 259 106 2 10 267 5 262 6.54e-106 308
Msa1169710 AT4G11410.2 59.055 254 102 2 13 266 8 259 1.20e-105 307
Msa1169710 AT4G23420.1 58.077 260 107 2 10 268 5 263 2.29e-105 309
Msa1169710 AT4G23420.2 58.077 260 107 2 10 268 5 263 2.29e-105 309
Msa1169710 AT4G23430.1 58.462 260 104 3 10 268 5 261 7.44e-105 308
Msa1169710 AT4G23420.3 58.661 254 103 2 15 267 27 279 4.65e-104 306
Msa1169710 AT4G23420.4 60.759 237 92 1 10 246 5 240 3.16e-103 301
Msa1169710 AT4G23430.4 55.385 260 104 3 10 268 5 253 8.29e-98 289
Msa1169710 AT4G23430.3 55.000 260 103 4 10 268 5 251 6.76e-95 282
Msa1169710 AT4G24050.1 52.290 262 121 3 10 268 10 270 9.83e-83 252
Msa1169710 AT4G24050.2 52.107 261 121 3 10 267 10 269 1.03e-82 249
Msa1169710 AT5G50130.9 50.607 247 119 2 1 245 1 246 3.41e-78 238
Msa1169710 AT5G50130.2 50.607 247 119 2 1 245 1 246 1.53e-77 238
Msa1169710 AT5G50130.3 50.403 248 119 3 1 245 1 247 4.44e-77 235
Msa1169710 AT5G50130.4 50.403 248 119 3 1 245 1 247 2.05e-76 235
Msa1169710 AT5G50130.1 50.403 248 119 3 1 245 1 247 5.53e-76 234
Msa1169710 AT1G64590.1 48.413 252 122 4 22 268 22 270 1.81e-64 205
Msa1169710 AT5G50130.6 49.275 207 104 1 39 245 8 213 7.07e-63 199
Msa1169710 AT5G50130.8 49.275 207 104 1 39 245 8 213 2.12e-62 199
Msa1169710 AT5G50130.5 49.038 208 104 2 39 245 8 214 9.43e-62 197
Msa1169710 AT5G50130.7 49.038 208 104 2 39 245 8 214 2.45e-61 196
Msa1169710 AT5G54190.1 32.558 258 129 9 38 263 96 340 7.28e-27 108
Msa1169710 AT4G27440.2 32.143 280 143 9 19 263 69 336 1.21e-24 102
Msa1169710 AT4G27440.1 32.143 280 143 9 19 263 69 336 1.21e-24 102
Msa1169710 AT1G03630.2 34.496 258 127 9 36 263 89 334 1.04e-23 99.4
Msa1169710 AT1G03630.1 34.496 258 127 9 36 263 91 336 1.11e-23 99.4
Msa1169710 AT4G27760.1 33.755 237 141 7 33 261 56 284 1.35e-23 99.0
Msa1169710 AT5G53090.1 34.599 237 138 6 33 259 55 284 4.05e-23 97.4
Msa1169710 AT5G53100.1 37.838 222 121 6 33 245 43 256 7.97e-21 90.9
Msa1169710 AT4G09750.1 27.317 205 139 4 38 242 47 241 1.67e-19 86.7
Msa1169710 AT5G54190.2 31.683 202 108 6 63 241 1 195 2.02e-19 85.9
Msa1169710 AT5G15940.4 27.016 248 153 7 17 245 41 279 6.35e-18 82.4
Msa1169710 AT5G15940.3 27.016 248 153 7 17 245 41 279 9.01e-18 82.4
Msa1169710 AT5G15940.2 27.016 248 153 7 17 245 41 279 9.01e-18 82.4
Msa1169710 AT5G15940.1 27.016 248 153 7 17 245 40 278 9.03e-18 82.4
Msa1169710 AT5G04070.1 27.679 224 138 7 37 244 61 276 5.67e-15 74.3

Find 109 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCCTTTAGCTCCAATT+TGG 0.225108 7_4:+62752902 None:intergenic
TCAAAGTTAGCCCTAAAATT+TGG 0.226733 7_4:+62752153 None:intergenic
TGAGTGATTACATGTTTCTT+TGG 0.256499 7_4:+62743876 None:intergenic
GGTATAAGCGGTAGAATATA+TGG 0.256886 7_4:+62752302 None:intergenic
CAACAAGAGTGTTGGCTCTT+AGG 0.271288 7_4:-62746533 Msa1169710:CDS
TATGCTTGCCCGTTTATTTA+CGG 0.283519 7_4:-62743573 Msa1169710:three_prime_UTR
CTCTTGTGTTATTTGTTGTT+TGG 0.296057 7_4:+62746461 None:intergenic
ATGGCTGGTCCAAGTGGGTT+TGG 0.308042 7_4:-62752097 Msa1169710:CDS
CCAAGCGTGAAAGGTGTAAC+TGG 0.317042 7_4:-62743786 Msa1169710:three_prime_UTR
TAAATGTACATGATCCAAAT+TGG 0.318278 7_4:-62752916 Msa1169710:five_prime_UTR
GCAGGAGGAGCAAGTGGTAT+AGG 0.327892 7_4:-62746564 Msa1169710:intron
AATGAAATTAATTCAATGTA+TGG 0.333059 7_4:-62752948 None:intergenic
ATTGACCACACTTTGCTGTT+TGG 0.337782 7_4:-62743646 Msa1169710:three_prime_UTR
TAACTTTAACCGTAAATAAA+CGG 0.344177 7_4:+62743564 None:intergenic
AACAGTTAGCAAAGAAACTT+TGG 0.348947 7_4:-62743710 Msa1169710:three_prime_UTR
GAGTGATTACATGTTTCTTT+GGG 0.354177 7_4:+62743877 None:intergenic
TGCAAAAGCAACTGGAATAG+AGG 0.360987 7_4:-62745234 Msa1169710:CDS
GGTGTAATATCGTTGATAAC+AGG 0.366707 7_4:-62752121 Msa1169710:CDS
CAGTTACACCTTTCACGCTT+GGG 0.391289 7_4:+62743787 None:intergenic
GAAGATTTGTCAAGAGGAAA+TGG 0.402419 7_4:+62745279 None:intergenic
ATCACAATAACACACGTGTT+TGG 0.410384 7_4:+62743522 None:intergenic
AACTTTAACCGTAAATAAAC+GGG 0.411888 7_4:+62743565 None:intergenic
CCAGTTACACCTTTCACGCT+TGG 0.416331 7_4:+62743786 None:intergenic
CAGGAGGAGCAAGTGGTATA+GGG 0.417261 7_4:-62746563 Msa1169710:CDS
ATGTAATATGTTGGCTAACT+TGG 0.417541 7_4:+62744994 None:intergenic
AATAATAAGTTATGATAAAG+TGG 0.420925 7_4:+62743619 None:intergenic
ATGGGACCAAGTACTTGATT+AGG 0.424377 7_4:+62752321 None:intergenic
TAGATACACTTACTTTAGAA+AGG 0.428762 7_4:-62745180 Msa1169710:CDS
AAACAAACTGCAAAAGCAAC+TGG 0.438605 7_4:-62745242 Msa1169710:CDS
ATGATCCAAATTGGAGCTAA+AGG 0.443648 7_4:-62752907 Msa1169710:five_prime_UTR
AGTACTTGATTAGGTAAGTA+AGG 0.444276 7_4:+62752330 None:intergenic
AGAGGAGTCATTATCACTCC+TGG 0.445561 7_4:+62744710 None:intergenic
TTGAGCTATTGAAGGTTGCC+AGG 0.457761 7_4:+62752874 None:intergenic
TTGGGAGGTTGAGCTATTGA+AGG 0.458051 7_4:+62752866 None:intergenic
ACAGTTAGCAAAGAAACTTT+GGG 0.459816 7_4:-62743709 Msa1169710:three_prime_UTR
TCCCTCCTCTGAGAGTTTGA+AGG 0.466137 7_4:+62745701 None:intergenic
TTCATTTGCATGTAATATGT+TGG 0.469410 7_4:+62744985 None:intergenic
ATCAGCTTCAACTGCAGAGC+AGG 0.470999 7_4:-62752074 Msa1169710:CDS
TACTTACCTAATCAAGTACT+TGG 0.472720 7_4:-62752327 Msa1169710:five_prime_UTR
CAATTTGCAACAAACCATCT+TGG 0.474711 7_4:-62745669 Msa1169710:intron
GTTAAAGTTATTGTTCTATG+AGG 0.474931 7_4:-62743551 Msa1169710:three_prime_UTR
AGATACACTTACTTTAGAAA+GGG 0.482958 7_4:-62745179 Msa1169710:CDS
TGTAACTGGGAAGTACTTTG+TGG 0.484126 7_4:-62743772 Msa1169710:three_prime_UTR
AGAATAGGATAGATTTGAGG+TGG 0.489965 7_4:+62752268 None:intergenic
TAGAGAATAGGATAGATTTG+AGG 0.493411 7_4:+62752265 None:intergenic
TATTCTAGCAAGAAGGCCTA+TGG 0.494558 7_4:-62745022 Msa1169710:CDS
TATCAGTTATTCTAGCAAGA+AGG 0.496219 7_4:-62745029 Msa1169710:intron
TGCAAAATGTCACATTTGAT+AGG 0.496228 7_4:-62743908 Msa1169710:three_prime_UTR
ATGAAATTAATTCAATGTAT+GGG 0.508597 7_4:-62752947 None:intergenic
GTTAGCCCTAAAATTTGGTA+TGG 0.508963 7_4:+62752158 None:intergenic
TGAAGTTGTCGACGAATGAT+CGG 0.510701 7_4:+62746382 None:intergenic
CAAGAAGAAGATTTGTCAAG+AGG 0.511567 7_4:+62745273 None:intergenic
CCCTCCTCTGAGAGTTTGAA+GGG 0.512532 7_4:+62745702 None:intergenic
AGGAGCAAGTGGTATAGGGT+TGG 0.516651 7_4:-62746559 Msa1169710:CDS
GCAAAAGCAACTGGAATAGA+GGG 0.523925 7_4:-62745233 Msa1169710:CDS
CACTCCTGGGTGGACAGAGT+TGG 0.526311 7_4:+62744724 None:intergenic
GGGCTAACTTTGAACAATGG+TGG 0.535424 7_4:-62752143 Msa1169710:exon
TGAACTCTCTCATCGCCTGC+AGG 0.536243 7_4:-62744966 Msa1169710:intron
GCACTCCACCCAAGCGTGAA+AGG 0.536508 7_4:-62743795 Msa1169710:three_prime_UTR
GGCTAACTTTGAACAATGGT+GGG 0.538220 7_4:-62752142 Msa1169710:exon
GAATAGGATAGATTTGAGGT+GGG 0.540640 7_4:+62752269 None:intergenic
TCGTTGATAACAGGGATGGC+TGG 0.541160 7_4:-62752112 Msa1169710:CDS
GGCTAACTTGGACTGTCCAT+AGG 0.541676 7_4:+62745006 None:intergenic
TAAATGAGACATTACCAAGA+TGG 0.541735 7_4:+62745655 None:intergenic
GTATAAGCGGTAGAATATAT+GGG 0.544678 7_4:+62752303 None:intergenic
AATATTGGCAGAAACAATGC+TGG 0.547510 7_4:-62745738 Msa1169710:intron
AACCTTACCGCAATCATCAC+AGG 0.550938 7_4:-62752028 Msa1169710:intron
AATAGGATAGATTTGAGGTG+GGG 0.552412 7_4:+62752270 None:intergenic
CCCCTTCAAACTCTCAGAGG+AGG 0.559987 7_4:-62745703 Msa1169710:CDS
ACATAAATGTAACTTGATTG+AGG 0.563188 7_4:+62752362 None:intergenic
GATACACTTACTTTAGAAAG+GGG 0.566050 7_4:-62745178 Msa1169710:CDS
TTACACCTTTCACGCTTGGG+TGG 0.571341 7_4:+62743790 None:intergenic
GAAGCTGATCCAAACCCACT+TGG 0.575613 7_4:+62752088 None:intergenic
ATAGGATAGATTTGAGGTGG+GGG 0.576660 7_4:+62752271 None:intergenic
AAGAGTGTTGGCTCTTAGGA+AGG 0.576770 7_4:-62746529 Msa1169710:CDS
CCCTTCAAACTCTCAGAGGA+GGG 0.579093 7_4:-62745702 Msa1169710:CDS
TTAGGGCTAACTTTGAACAA+TGG 0.581097 7_4:-62752146 Msa1169710:exon
ATTAATGCAGGAGGAGCAAG+TGG 0.593577 7_4:-62746570 Msa1169710:intron
CAAGCGTGAAAGGTGTAACT+GGG 0.593950 7_4:-62743785 Msa1169710:three_prime_UTR
GAGGAGTCATTATCACTCCT+GGG 0.595234 7_4:+62744711 None:intergenic
GTGTAATATCGTTGATAACA+GGG 0.598198 7_4:-62752120 Msa1169710:CDS
AGAGAACAAATGTGCACGAG+TGG 0.599828 7_4:-62746442 Msa1169710:CDS
TTCTTGCAGCAATGATAACA+TGG 0.603077 7_4:+62746505 None:intergenic
ACTGCAGAGCAGGTTACTGA+AGG 0.606028 7_4:-62752064 Msa1169710:CDS
CATATGGAAGAACGTTCCAC+AGG 0.606700 7_4:-62743971 Msa1169710:CDS
CACATTTGTCAACAGGAAGA+GGG 0.607675 7_4:-62744761 Msa1169710:intron
GTTGGAGACAACAAGAGTGT+TGG 0.608274 7_4:-62746541 Msa1169710:CDS
ACAAACATTAAGATGTTGAG+AGG 0.608894 7_4:+62746345 None:intergenic
GGACAGACTTTGTTGAGCAT+AGG 0.619279 7_4:+62746403 None:intergenic
ACAGGGATGGCTGGTCCAAG+TGG 0.620606 7_4:-62752103 Msa1169710:CDS
TAAGAAGAATATCTCATGAG+AGG 0.620624 7_4:+62744692 None:intergenic
TAAGATAGATAAAATGCCTG+TGG 0.625830 7_4:+62743955 None:intergenic
CTGCCCCTTCAAACTCTCAG+AGG 0.632914 7_4:-62745706 Msa1169710:CDS
GAGTGCAACATAACATGTCG+TGG 0.635678 7_4:+62743812 None:intergenic
AATATCGTTGATAACAGGGA+TGG 0.646000 7_4:-62752116 Msa1169710:CDS
GTGAACCAAACAGCAAAGTG+TGG 0.649072 7_4:+62743641 None:intergenic
GCTAAAGGAAATTTACAACC+TGG 0.654879 7_4:-62752892 Msa1169710:five_prime_UTR
TGTCACAACTCAGAGAGGAA+AGG 0.658190 7_4:-62752184 Msa1169710:five_prime_UTR
ACACGTGTGTTATTGTGATG+TGG 0.658361 7_4:-62743518 Msa1169710:three_prime_UTR
CCTCCTCTGAGAGTTTGAAG+GGG 0.662584 7_4:+62745703 None:intergenic
AAGAAACATTGAATCTGCAG+AGG 0.666255 7_4:-62746487 Msa1169710:CDS
AACACTACCTGTGATGATTG+CGG 0.666284 7_4:+62752021 None:intergenic
TACCTGTGATGATTGCGGTA+AGG 0.667381 7_4:+62752026 None:intergenic
GGGGCGTAGGAAGGTATAAG+CGG 0.676860 7_4:+62752290 None:intergenic
ACAGCCAACTCTGTCCACCC+AGG 0.685876 7_4:-62744728 Msa1169710:CDS
ATGTGTGTCACAACTCAGAG+AGG 0.687171 7_4:-62752189 Msa1169710:five_prime_UTR
AAGCAACTGGAATAGAGGGG+AGG 0.690942 7_4:-62745229 Msa1169710:CDS
CAAAAGCAACTGGAATAGAG+GGG 0.709374 7_4:-62745232 Msa1169710:CDS
GAGTCATTATCACTCCTGGG+TGG 0.734865 7_4:+62744714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATAATTATTTAAAA+AGG - chr7_4:62749065-62749084 Msa1169710:intron 0.0%
!! AAAAAATCGTAAAAAAAATT+CGG + chr7_4:62745403-62745422 None:intergenic 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG + chr7_4:62745427-62745446 None:intergenic 10.0%
!! TTAAAAGTCAAAAAAAAATT+CGG + chr7_4:62745464-62745483 None:intergenic 10.0%
!!! TTTTTAGATACATTTAATTA+AGG + chr7_4:62745753-62745772 None:intergenic 10.0%
!! TATAAAATGAAAAAAAATCA+TGG + chr7_4:62746102-62746121 None:intergenic 10.0%
!!! AAACAAAATATTCAATTTTA+TGG + chr7_4:62746709-62746728 None:intergenic 10.0%
!! ATATATATATATATATGAGT+CGG + chr7_4:62747187-62747206 None:intergenic 10.0%
!! GATAAAAAATTATTACAAAA+TGG - chr7_4:62748830-62748849 Msa1169710:intron 10.0%
!!! CTTTAAAAATATAAAATAAG+TGG + chr7_4:62748953-62748972 None:intergenic 10.0%
!! TATATAATTATTTAAAAAGG+CGG - chr7_4:62749068-62749087 Msa1169710:intron 10.0%
!!! ATAAATTTATGGTTTTTTTT+TGG + chr7_4:62750159-62750178 None:intergenic 10.0%
!! ATCTTAGATATATAAATTTA+TGG + chr7_4:62750170-62750189 None:intergenic 10.0%
!!! TTTTGTTAAAAAATGTTTTA+TGG - chr7_4:62750782-62750801 Msa1169710:intron 10.0%
!!! AAATTGTTAGTAATTAATTT+TGG - chr7_4:62751531-62751550 Msa1169710:intron 10.0%
!!! AATTGTTAGTAATTAATTTT+GGG - chr7_4:62751532-62751551 Msa1169710:intron 10.0%
!! ATAAATAAACATAAGTTATA+TGG - chr7_4:62752130-62752149 Msa1169710:CDS 10.0%
!!! ATTTTTTTAAAAGAGAAAAT+TGG - chr7_4:62752168-62752187 Msa1169710:five_prime_UTR 10.0%
!!! ACTCATATATTTTTTTTTTT+GGG - chr7_4:62752541-62752560 Msa1169710:intron 10.0%
!! TTTATAGTTGTATTCTTAAA+AGG - chr7_4:62743899-62743918 Msa1169710:three_prime_UTR 15.0%
!!! ATATCTATAGTAAGTTTTTT+TGG - chr7_4:62744501-62744520 Msa1169710:intron 15.0%
!!! AAACTGATTTTTTTTTTGAA+GGG + chr7_4:62745376-62745395 None:intergenic 15.0%
!!! AAAACTGATTTTTTTTTTGA+AGG + chr7_4:62745377-62745396 None:intergenic 15.0%
!! AAAAATCGTAAAAAAAATTC+GGG + chr7_4:62745402-62745421 None:intergenic 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG + chr7_4:62745426-62745445 None:intergenic 15.0%
!!! GAATTTTTTTTTTCTTTTGA+AGG - chr7_4:62745530-62745549 Msa1169710:intron 15.0%
!! AATTAAATGTATCTAAAAAG+TGG - chr7_4:62745754-62745773 Msa1169710:intron 15.0%
!!! TATCTATATATTTTTTTGAG+AGG - chr7_4:62745977-62745996 Msa1169710:intron 15.0%
!! ATATATATATATATAGAGTC+AGG - chr7_4:62746412-62746431 Msa1169710:CDS 15.0%
!!! AATATTCAATTTTATGGTTT+TGG + chr7_4:62746703-62746722 None:intergenic 15.0%
!! AAAAAAAAAAAAACTGAAAG+TGG - chr7_4:62746940-62746959 Msa1169710:intron 15.0%
!! AAAAAAAAAAAACTGAAAGT+GGG - chr7_4:62746941-62746960 Msa1169710:intron 15.0%
!! TATATATATATATATGAGTC+GGG + chr7_4:62747186-62747205 None:intergenic 15.0%
!! AAATGAAAAATAAAGTTACA+TGG - chr7_4:62747449-62747468 Msa1169710:intron 15.0%
!!! TTAAAGGTTTTAAATTATGT+TGG - chr7_4:62748187-62748206 Msa1169710:intron 15.0%
!! AAAGAAAAAAAAATTAATGC+AGG - chr7_4:62749817-62749836 Msa1169710:intron 15.0%
!! AAACCATAAATTTATATATC+TGG - chr7_4:62750130-62750149 Msa1169710:intron 15.0%
!!! TTTTTTGTTTTTATAGTGTT+CGG + chr7_4:62750357-62750376 None:intergenic 15.0%
!! ATTTATTCTGATAAATTTCT+AGG - chr7_4:62750395-62750414 Msa1169710:intron 15.0%
!! TTTATGAATAAATCAATAAC+CGG + chr7_4:62750522-62750541 None:intergenic 15.0%
!!! CTTAATATATTTCAATGTTT+TGG - chr7_4:62750599-62750618 Msa1169710:intron 15.0%
!! ACTTATGCTATAATAATATA+AGG + chr7_4:62751482-62751501 None:intergenic 15.0%
!!! GTTTGATTTGTTTATAAAAT+TGG - chr7_4:62752275-62752294 Msa1169710:five_prime_UTR 15.0%
!! ATCTACATTTGAATTTATAT+TGG - chr7_4:62752345-62752364 Msa1169710:five_prime_UTR 15.0%
!!! TTATCTATCTTAATTCTTTT+AGG - chr7_4:62752455-62752474 Msa1169710:intron 15.0%
!!! CACTCATATATTTTTTTTTT+TGG - chr7_4:62752540-62752559 Msa1169710:intron 15.0%
!! AATAATAAGTTATGATAAAG+TGG + chr7_4:62752783-62752802 None:intergenic 15.0%
!!! ACATAAATTTTAGCAGTTTT+GGG + chr7_4:62743554-62743573 None:intergenic 20.0%
!!! AACATAAATTTTAGCAGTTT+TGG + chr7_4:62743555-62743574 None:intergenic 20.0%
!! TTTATTTGATCAAAAATCAC+AGG - chr7_4:62743650-62743669 Msa1169710:three_prime_UTR 20.0%
!! TCAATGGAATAAAGATTAAA+GGG + chr7_4:62743779-62743798 None:intergenic 20.0%
!! TTCAATGGAATAAAGATTAA+AGG + chr7_4:62743780-62743799 None:intergenic 20.0%
!! AAAACAAAAAGTTAGAGAAT+AGG + chr7_4:62744149-62744168 None:intergenic 20.0%
!! TTGTTCATAATACGTTAATA+TGG + chr7_4:62744599-62744618 None:intergenic 20.0%
!!! TTCTTTCTTTTCAAAGTTAT+TGG - chr7_4:62744662-62744681 Msa1169710:intron 20.0%
!! AACCAAATTAAAATGATTTG+TGG + chr7_4:62744755-62744774 None:intergenic 20.0%
!! TAGATTTGAATAATGTGTAA+TGG - chr7_4:62744811-62744830 Msa1169710:intron 20.0%
!!! CTTGTTGTATATTTTTAAGA+AGG - chr7_4:62744879-62744898 Msa1169710:intron 20.0%
!! AATTGAATGTATCTAAAAAG+TGG + chr7_4:62745108-62745127 None:intergenic 20.0%
!! TCAAGTACATCATTAATTAA+AGG - chr7_4:62745155-62745174 Msa1169710:CDS 20.0%
!!! ATACTAAATTTTTCTTGTTG+CGG + chr7_4:62745912-62745931 None:intergenic 20.0%
!! TAAATGAAACATTCATCTAT+TGG + chr7_4:62746270-62746289 None:intergenic 20.0%
!! AAAGATTCAGTTTAATTCAA+AGG - chr7_4:62746672-62746691 Msa1169710:intron 20.0%
!! AAGATTCAGTTTAATTCAAA+GGG - chr7_4:62746673-62746692 Msa1169710:intron 20.0%
!! TTTATGATTGATGAGATTTA+AGG + chr7_4:62746771-62746790 None:intergenic 20.0%
!! ATAAAAGATCTACAGAATTA+GGG - chr7_4:62746989-62747008 Msa1169710:intron 20.0%
!! ATTTGAATATTATAAGACGT+AGG - chr7_4:62747095-62747114 Msa1169710:intron 20.0%
!! CTACTTTGATTATCATAAAA+AGG - chr7_4:62747366-62747385 Msa1169710:intron 20.0%
!!! GACTATTGATTATCATAAAA+AGG - chr7_4:62747396-62747415 Msa1169710:intron 20.0%
!! AAAAAAATCAGATTTGACAA+AGG - chr7_4:62747863-62747882 Msa1169710:intron 20.0%
!! TGAACCAAAATAATAAAAAG+AGG - chr7_4:62748464-62748483 Msa1169710:intron 20.0%
!!! TACTTTTCCTTTGTAAATTA+TGG + chr7_4:62748533-62748552 None:intergenic 20.0%
!! AGATATAAAAAAATAGACGT+TGG - chr7_4:62749608-62749627 Msa1169710:intron 20.0%
!! TGACCAGATATATAAATTTA+TGG + chr7_4:62750136-62750155 None:intergenic 20.0%
!! CAATGCATAATATATATACA+AGG - chr7_4:62750316-62750335 Msa1169710:intron 20.0%
!!! TTTTTGTTTTTATAGTGTTC+GGG + chr7_4:62750356-62750375 None:intergenic 20.0%
!!! TGAATTTGACAATTAAGTTT+TGG - chr7_4:62750633-62750652 Msa1169710:intron 20.0%
!!! TAAGTTTTGGATTGAAATAT+TGG - chr7_4:62750646-62750665 Msa1169710:intron 20.0%
!! GTTAATCACATTTAAAAATG+TGG + chr7_4:62750961-62750980 None:intergenic 20.0%
!! AGAAGATCAATGATAAAAAA+GGG - chr7_4:62751254-62751273 Msa1169710:intron 20.0%
!! AAGTATATAAATGAGAGATA+TGG - chr7_4:62751498-62751517 Msa1169710:intron 20.0%
!!! TAATTAATTTTGGGAAAAGA+AGG - chr7_4:62751541-62751560 Msa1169710:intron 20.0%
!!! ATATTTGTCTTTTGTGTTTA+AGG + chr7_4:62751754-62751773 None:intergenic 20.0%
!! ATACTTTGTGTTAAGTAATA+TGG - chr7_4:62751844-62751863 Msa1169710:intron 20.0%
!!! ATTAAATTAGATTTTGTGTG+TGG - chr7_4:62751904-62751923 Msa1169710:intron 20.0%
!! TATAAATCAAGGAAAATTTG+TGG - chr7_4:62751928-62751947 Msa1169710:intron 20.0%
!!! ATAAATATTTTAGTGAGCAT+TGG + chr7_4:62752086-62752105 None:intergenic 20.0%
!! TTATAAGCTAAAAACATTGA+GGG + chr7_4:62752326-62752345 None:intergenic 20.0%
!! ATTATAAGCTAAAAACATTG+AGG + chr7_4:62752327-62752346 None:intergenic 20.0%
!! TAACTTTAACCGTAAATAAA+CGG + chr7_4:62752838-62752857 None:intergenic 20.0%
! TAAATGTACATGATCCAAAT+TGG - chr7_4:62743483-62743502 Msa1169710:three_prime_UTR 25.0%
!! TTATGTTTTACCTTTCCTTA+TGG - chr7_4:62743568-62743587 Msa1169710:three_prime_UTR 25.0%
!!! TATGATTGATTTGTAGCAAT+GGG + chr7_4:62743717-62743736 None:intergenic 25.0%
!!! ATATGATTGATTTGTAGCAA+TGG + chr7_4:62743718-62743737 None:intergenic 25.0%
!!! CAAATCAGTGTTTTTTTCAA+TGG + chr7_4:62743795-62743814 None:intergenic 25.0%
!! CATTGAAAAAAACACTGATT+TGG - chr7_4:62743793-62743812 Msa1169710:three_prime_UTR 25.0%
!!! CTATGCTTACTTTTTTGTTT+TGG - chr7_4:62743869-62743888 Msa1169710:three_prime_UTR 25.0%
! ACATAAATGTAACTTGATTG+AGG + chr7_4:62744040-62744059 None:intergenic 25.0%
! TACATGCTATCAATTAAATC+TGG - chr7_4:62744454-62744473 Msa1169710:intron 25.0%
!!! GTCCACAAATCATTTTAATT+TGG - chr7_4:62744750-62744769 Msa1169710:intron 25.0%
!!! GAATTTAATAGGCACTTTTT+AGG + chr7_4:62744910-62744929 None:intergenic 25.0%
!!! AAAAGTGCCTATTAAATTCA+AGG - chr7_4:62744911-62744930 Msa1169710:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr7_4:62745084-62745103 None:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG - chr7_4:62745119-62745138 Msa1169710:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG + chr7_4:62745649-62745668 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG + chr7_4:62745648-62745667 None:intergenic 25.0%
!!! ATTTTGTTAATTTGATGACG+TGG + chr7_4:62745312-62745331 None:intergenic 25.0%
! ACGTCATCAAATTAACAAAA+TGG - chr7_4:62745311-62745330 Msa1169710:intron 25.0%
! ATCAAATTAACAAAATGGCA+TGG - chr7_4:62745316-62745335 Msa1169710:intron 25.0%
! TCAAATTAACAAAATGGCAT+GGG - chr7_4:62745317-62745336 Msa1169710:intron 25.0%
! AAGGGAAAAAAAATAAACCA+GGG + chr7_4:62745358-62745377 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG - chr7_4:62745648-62745667 Msa1169710:intron 25.0%
! TTAACTGATTAAACTTTGCA+GGG - chr7_4:62745649-62745668 Msa1169710:intron 25.0%
!! ATTTTGCTTATATTAGTGAC+CGG - chr7_4:62745778-62745797 Msa1169710:intron 25.0%
! ATATTTGAAGATTAGTAGAC+CGG - chr7_4:62745808-62745827 Msa1169710:intron 25.0%
!! AAATTTTATCAATTCCGATC+CGG + chr7_4:62745834-62745853 None:intergenic 25.0%
! ACTAACCTTTATTACTTGTT+TGG - chr7_4:62745871-62745890 Msa1169710:intron 25.0%
! GCAACAAGAAAAATTTAGTA+TGG - chr7_4:62745911-62745930 Msa1169710:intron 25.0%
!! CAATGAACTTTTACTTAATG+AGG + chr7_4:62746186-62746205 None:intergenic 25.0%
! ATTCATCTATTGGAAGTAAT+TGG + chr7_4:62746260-62746279 None:intergenic 25.0%
! TAGGATTAACTAAGTTTGAA+CGG + chr7_4:62746486-62746505 None:intergenic 25.0%
! TTCAAACTTAGTTAATCCTA+CGG - chr7_4:62746486-62746505 Msa1169710:CDS 25.0%
! TTTAGTAAATTCTCTTTGCT+GGG + chr7_4:62746655-62746674 None:intergenic 25.0%
! GATAAAAGATCTACAGAATT+AGG - chr7_4:62746988-62747007 Msa1169710:intron 25.0%
! TAAAAGATCTACAGAATTAG+GGG - chr7_4:62746990-62747009 Msa1169710:intron 25.0%
! ACTTTGATTATCATATTGTG+AGG - chr7_4:62747264-62747283 Msa1169710:intron 25.0%
! GAGCAGAAAAATACAAAATT+TGG - chr7_4:62747475-62747494 Msa1169710:intron 25.0%
!! GTAAGTATTGTACATCATAA+AGG + chr7_4:62747528-62747547 None:intergenic 25.0%
!! TGAAAACGTTTGAAATGATT+TGG - chr7_4:62748162-62748181 Msa1169710:intron 25.0%
!! GAAAACGTTTGAAATGATTT+GGG - chr7_4:62748163-62748182 Msa1169710:intron 25.0%
!! TTGAAATGATTTGGGTTTAA+AGG - chr7_4:62748171-62748190 Msa1169710:intron 25.0%
! TCCAATAGTATGTGTATAAT+GGG - chr7_4:62748210-62748229 Msa1169710:intron 25.0%
!! CACTCCTCTTTTTATTATTT+TGG + chr7_4:62748471-62748490 None:intergenic 25.0%
! ATAGTACTGTACTAAGAATT+TGG - chr7_4:62748675-62748694 Msa1169710:intron 25.0%
! TTGACAATCGAAATATACAA+AGG - chr7_4:62748741-62748760 Msa1169710:intron 25.0%
!!! TGTTGACTTTAAGTATGAAT+AGG + chr7_4:62749311-62749330 None:intergenic 25.0%
!!! CAACAAATTTTCAGTTTTGT+TGG - chr7_4:62749326-62749345 Msa1169710:intron 25.0%
! AACTCACTAATAAACACAAA+AGG + chr7_4:62749556-62749575 None:intergenic 25.0%
!!! CTATTTTTTTATATCTGAGG+TGG + chr7_4:62749604-62749623 None:intergenic 25.0%
!!! CGTCTATTTTTTTATATCTG+AGG + chr7_4:62749607-62749626 None:intergenic 25.0%
! AATTTATGTTACCAAGTGTT+GGG + chr7_4:62749773-62749792 None:intergenic 25.0%
! TAATTTATGTTACCAAGTGT+TGG + chr7_4:62749774-62749793 None:intergenic 25.0%
! GAAAAAAAAATTAATGCAGG+AGG - chr7_4:62749820-62749839 Msa1169710:intron 25.0%
!!! TTTTGTTTTTATAGTGTTCG+GGG + chr7_4:62750355-62750374 None:intergenic 25.0%
! CACAATACACTAATGATTAA+TGG + chr7_4:62751015-62751034 None:intergenic 25.0%
! GAGGTAACAATTAAGTAATA+GGG + chr7_4:62751073-62751092 None:intergenic 25.0%
! AGAGGTAACAATTAAGTAAT+AGG + chr7_4:62751074-62751093 None:intergenic 25.0%
!!! TAATCCCTTTTTAACTTCTT+AGG - chr7_4:62751097-62751116 Msa1169710:intron 25.0%
!! TAGATACACTTACTTTAGAA+AGG - chr7_4:62751219-62751238 Msa1169710:intron 25.0%
!! AGATACACTTACTTTAGAAA+GGG - chr7_4:62751220-62751239 Msa1169710:intron 25.0%
! GAGAAGATCAATGATAAAAA+AGG - chr7_4:62751253-62751272 Msa1169710:intron 25.0%
! AGTTAATTTCTTGCTTCATA+TGG - chr7_4:62751310-62751329 Msa1169710:intron 25.0%
! TTCATTTGCATGTAATATGT+TGG + chr7_4:62751417-62751436 None:intergenic 25.0%
!!! GATTAGATTTAACTTGCATT+TGG + chr7_4:62751872-62751891 None:intergenic 25.0%
! TAAATCTAATCCAATTGCAT+TGG - chr7_4:62751881-62751900 Msa1169710:intron 25.0%
! CTAATTTAATCCAATGCAAT+TGG + chr7_4:62751894-62751913 None:intergenic 25.0%
!!! TTATTTTTTGCATATGCACT+TGG + chr7_4:62752670-62752689 None:intergenic 25.0%
! AACTTTAACCGTAAATAAAC+GGG + chr7_4:62752837-62752856 None:intergenic 25.0%
! GTTAAAGTTATTGTTCTATG+AGG - chr7_4:62752848-62752867 Msa1169710:five_prime_UTR 25.0%
! AATTTCCTTTAGCTCCAATT+TGG + chr7_4:62743500-62743519 None:intergenic 30.0%
!!! TAAATTTTAGCAGTTTTGGG+AGG + chr7_4:62743551-62743570 None:intergenic 30.0%
! GTATCATTTTCCATAAGGAA+AGG + chr7_4:62743581-62743600 None:intergenic 30.0%
! GCTTTGTATCATTTTCCATA+AGG + chr7_4:62743586-62743605 None:intergenic 30.0%
! TACACACAATTTGCTCTATT+AGG + chr7_4:62743943-62743962 None:intergenic 30.0%
ACTTGATTGAGGTAAGTATA+AGG + chr7_4:62744029-62744048 None:intergenic 30.0%
AGTACTTGATTAGGTAAGTA+AGG + chr7_4:62744072-62744091 None:intergenic 30.0%
TACTTACCTAATCAAGTACT+TGG - chr7_4:62744072-62744091 Msa1169710:intron 30.0%
GTATAAGCGGTAGAATATAT+GGG + chr7_4:62744099-62744118 None:intergenic 30.0%
TAGAGAATAGGATAGATTTG+AGG + chr7_4:62744137-62744156 None:intergenic 30.0%
TCAAAGTTAGCCCTAAAATT+TGG + chr7_4:62744249-62744268 None:intergenic 30.0%
!! GTGTAATATCGTTGATAACA+GGG - chr7_4:62744279-62744298 Msa1169710:intron 30.0%
ATGAAAGTGATCGATCTATA+GGG + chr7_4:62744418-62744437 None:intergenic 30.0%
GCATAAACTTACGATAGATA+TGG + chr7_4:62744552-62744571 None:intergenic 30.0%
ACTCTCTCAAGACATTTATA+GGG - chr7_4:62744718-62744737 Msa1169710:CDS 30.0%
TCTTTCATGAAGTAGTACAA+AGG - chr7_4:62744779-62744798 Msa1169710:intron 30.0%
TAATGATGTTATCCTTGAGT+CGG + chr7_4:62744937-62744956 None:intergenic 30.0%
ATCATTAAAACCCTCACTTT+AGG - chr7_4:62744950-62744969 Msa1169710:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG + chr7_4:62745650-62745669 None:intergenic 30.0%
AGGGAAAAAAAATAAACCAG+GGG + chr7_4:62745357-62745376 None:intergenic 30.0%
GAAGGGAAAAAAAATAAACC+AGG + chr7_4:62745359-62745378 None:intergenic 30.0%
AAGGAAAAAAAATTAGCCCA+GGG - chr7_4:62745549-62745568 Msa1169710:intron 30.0%
TAACTGATTAAACTTTGCAG+GGG - chr7_4:62745650-62745669 Msa1169710:intron 30.0%
!! TGTTCAACCATATTTTTGTC+CGG + chr7_4:62746218-62746237 None:intergenic 30.0%
AACTAATTTACTCTGTTGTG+AGG - chr7_4:62746315-62746334 Msa1169710:intron 30.0%
TTTATTGGATAGAAGAGGAA+AGG + chr7_4:62746571-62746590 None:intergenic 30.0%
! TCTCTTTTATTGGATAGAAG+AGG + chr7_4:62746576-62746595 None:intergenic 30.0%
! GAAGATGTGTTCTCTTTTAT+TGG + chr7_4:62746586-62746605 None:intergenic 30.0%
CTTTAGTAAATTCTCTTTGC+TGG + chr7_4:62746656-62746675 None:intergenic 30.0%
! GATTGATGAGATTTAAGGTT+TGG + chr7_4:62746766-62746785 None:intergenic 30.0%
TTCGTATGAGGAATTAACAA+AGG - chr7_4:62746816-62746835 Msa1169710:intron 30.0%
TCGTATGAGGAATTAACAAA+GGG - chr7_4:62746817-62746836 Msa1169710:intron 30.0%
ATTAACAAAGGGGAATAAGA+TGG - chr7_4:62746828-62746847 Msa1169710:intron 30.0%
! GTAGGATTAACTAGTTTGAA+CGG - chr7_4:62747113-62747132 Msa1169710:intron 30.0%
! ATTAACTAGTTTGAACGGTT+AGG - chr7_4:62747118-62747137 Msa1169710:intron 30.0%
! CTTTTAAATCCGAAACAAAC+CGG + chr7_4:62747837-62747856 None:intergenic 30.0%
ACAAAGGAGAAGAAATAAAC+TGG - chr7_4:62747879-62747898 Msa1169710:intron 30.0%
CACAAAAGAAGAAGATGAAT+AGG - chr7_4:62747945-62747964 Msa1169710:intron 30.0%
TGAACTATCTATGTTGAAGA+AGG - chr7_4:62748041-62748060 Msa1169710:intron 30.0%
! TAGGGTTTGAGTGAAAATTT+TGG - chr7_4:62748125-62748144 Msa1169710:intron 30.0%
! AGGGTTTGAGTGAAAATTTT+GGG - chr7_4:62748126-62748145 Msa1169710:intron 30.0%
GTCCAATAGTATGTGTATAA+TGG - chr7_4:62748209-62748228 Msa1169710:intron 30.0%
GTGTGTAAAGTATGGATATA+CGG - chr7_4:62748238-62748257 Msa1169710:intron 30.0%
TGTGTAAAGTATGGATATAC+GGG - chr7_4:62748239-62748258 Msa1169710:intron 30.0%
TGTGAACATATGTTTCCTTA+GGG + chr7_4:62748437-62748456 None:intergenic 30.0%
ATGTGAACATATGTTTCCTT+AGG + chr7_4:62748438-62748457 None:intergenic 30.0%
!! GTGTTATTTGAACAACCATT+TGG - chr7_4:62748488-62748507 Msa1169710:intron 30.0%
GAGACAACCATAATTTACAA+AGG - chr7_4:62748523-62748542 Msa1169710:intron 30.0%
GTCACAAAAGTTGTCAAAAA+TGG - chr7_4:62748623-62748642 Msa1169710:intron 30.0%
CGAAATATACAAAGGAAAGT+AGG - chr7_4:62748749-62748768 Msa1169710:intron 30.0%
GACTTTAAGTATGAATAGGA+GGG + chr7_4:62749307-62749326 None:intergenic 30.0%
TGACTTTAAGTATGAATAGG+AGG + chr7_4:62749308-62749327 None:intergenic 30.0%
AAGTAGCTAAGTACAAACAT+GGG + chr7_4:62749505-62749524 None:intergenic 30.0%
GTGAGTTATCGTATTAAACT+AGG + chr7_4:62749722-62749741 None:intergenic 30.0%
!! CTCTTGTGTTATTTGTTGTT+TGG + chr7_4:62749941-62749960 None:intergenic 30.0%
ACAAACATTAAGATGTTGAG+AGG + chr7_4:62750057-62750076 None:intergenic 30.0%
TTACATGCACACAAGTTTAA+TGG + chr7_4:62750486-62750505 None:intergenic 30.0%
ATGTAAATGTCATATCGTAC+CGG - chr7_4:62750500-62750519 Msa1169710:intron 30.0%
TAAATGAGACATTACCAAGA+TGG + chr7_4:62750747-62750766 None:intergenic 30.0%
CTGCAAATGTAAGAAAAAGT+GGG + chr7_4:62750811-62750830 None:intergenic 30.0%
GATTAATTCAGTTGAGTAGA+TGG - chr7_4:62750858-62750877 Msa1169710:intron 30.0%
GGTTAATTCAGTTGAATATG+TGG + chr7_4:62750940-62750959 None:intergenic 30.0%
TAATCATTAGTGTATTGTGC+TGG - chr7_4:62751016-62751035 Msa1169710:intron 30.0%
CTAAAACTTACTATACAGCA+AGG + chr7_4:62751043-62751062 None:intergenic 30.0%
GTTAAAAAGGGATTAGATAG+AGG + chr7_4:62751092-62751111 None:intergenic 30.0%
ATGGCCTAAGAAGTTAAAAA+GGG + chr7_4:62751104-62751123 None:intergenic 30.0%
AATGGCCTAAGAAGTTAAAA+AGG + chr7_4:62751105-62751124 None:intergenic 30.0%
! GATACACTTACTTTAGAAAG+GGG - chr7_4:62751221-62751240 Msa1169710:intron 30.0%
TATCAGTTATTCTAGCAAGA+AGG - chr7_4:62751370-62751389 Msa1169710:intron 30.0%
! ATGTAATATGTTGGCTAACT+TGG + chr7_4:62751408-62751427 None:intergenic 30.0%
! TGATTGTTATTATCGCTAGA+GGG + chr7_4:62751568-62751587 None:intergenic 30.0%
! ATGATTGTTATTATCGCTAG+AGG + chr7_4:62751569-62751588 None:intergenic 30.0%
AACAATCATATCCTAACTAG+TGG - chr7_4:62751580-62751599 Msa1169710:intron 30.0%
ATGGAGCATGCATATTAATT+TGG - chr7_4:62751610-62751629 Msa1169710:intron 30.0%
TAAGAAGAATATCTCATGAG+AGG + chr7_4:62751710-62751729 None:intergenic 30.0%
ATAGAGTAGCATTAGACAAA+AGG + chr7_4:62751804-62751823 None:intergenic 30.0%
TTGTGTGTGGTTATAAATCA+AGG - chr7_4:62751917-62751936 Msa1169710:intron 30.0%
TATGAGATAGAAGGTTAAGT+TGG + chr7_4:62752036-62752055 None:intergenic 30.0%
GTGAACATTTATGAGATAGA+AGG + chr7_4:62752045-62752064 None:intergenic 30.0%
CTAAAAACATTGAGGGTTAA+TGG + chr7_4:62752319-62752338 None:intergenic 30.0%
! AGATCTTCAGCTTTTACATA+TGG - chr7_4:62752412-62752431 Msa1169710:intron 30.0%
TAAGATAGATAAAATGCCTG+TGG + chr7_4:62752447-62752466 None:intergenic 30.0%
TGCAAAATGTCACATTTGAT+AGG - chr7_4:62752491-62752510 Msa1169710:intron 30.0%
!! TACATGTTTCTTTGGGTTTT+TGG + chr7_4:62752518-62752537 None:intergenic 30.0%
GAGTGATTACATGTTTCTTT+GGG + chr7_4:62752525-62752544 None:intergenic 30.0%
TGAGTGATTACATGTTTCTT+TGG + chr7_4:62752526-62752545 None:intergenic 30.0%
AACAGTTAGCAAAGAAACTT+TGG - chr7_4:62752689-62752708 Msa1169710:intron 30.0%
ACAGTTAGCAAAGAAACTTT+GGG - chr7_4:62752690-62752709 Msa1169710:intron 30.0%
ATGATCCAAATTGGAGCTAA+AGG - chr7_4:62743492-62743511 Msa1169710:three_prime_UTR 35.0%
GCTAAAGGAAATTTACAACC+TGG - chr7_4:62743507-62743526 Msa1169710:three_prime_UTR 35.0%
TAGTGTAGTGATACCAAATG+TGG - chr7_4:62743820-62743839 Msa1169710:three_prime_UTR 35.0%
AGGTAAGTATAAGGAAAGAG+CGG + chr7_4:62744020-62744039 None:intergenic 35.0%
GGTATAAGCGGTAGAATATA+TGG + chr7_4:62744100-62744119 None:intergenic 35.0%
! AATAGGATAGATTTGAGGTG+GGG + chr7_4:62744132-62744151 None:intergenic 35.0%
! GAATAGGATAGATTTGAGGT+GGG + chr7_4:62744133-62744152 None:intergenic 35.0%
AGAATAGGATAGATTTGAGG+TGG + chr7_4:62744134-62744153 None:intergenic 35.0%
! AGGCTACCATACCAAATTTT+AGG - chr7_4:62744235-62744254 Msa1169710:intron 35.0%
! GGCTACCATACCAAATTTTA+GGG - chr7_4:62744236-62744255 Msa1169710:intron 35.0%
GTTAGCCCTAAAATTTGGTA+TGG + chr7_4:62744244-62744263 None:intergenic 35.0%
TTAGGGCTAACTTTGAACAA+TGG - chr7_4:62744253-62744272 Msa1169710:intron 35.0%
!! GGTGTAATATCGTTGATAAC+AGG - chr7_4:62744278-62744297 Msa1169710:intron 35.0%
!! AATATCGTTGATAACAGGGA+TGG - chr7_4:62744283-62744302 Msa1169710:intron 35.0%
GATGAAAGTGATCGATCTAT+AGG + chr7_4:62744419-62744438 None:intergenic 35.0%
! GGTCAACCACATAATCTTTT+TGG - chr7_4:62744522-62744541 Msa1169710:intron 35.0%
GGTTGACCAAAAAGATTATG+TGG + chr7_4:62744531-62744550 None:intergenic 35.0%
CACTCTCTCAAGACATTTAT+AGG - chr7_4:62744717-62744736 Msa1169710:CDS 35.0%
! CAAGACATTTATAGGGTGTT+TGG - chr7_4:62744725-62744744 Msa1169710:CDS 35.0%
TGCTAATAGACCTAAAGTGA+GGG + chr7_4:62744963-62744982 None:intergenic 35.0%
TTGCTAATAGACCTAAAGTG+AGG + chr7_4:62744964-62744983 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + chr7_4:62745678-62745697 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + chr7_4:62745677-62745696 None:intergenic 35.0%
GAAGGAAAAAAAATTAGCCC+AGG - chr7_4:62745548-62745567 Msa1169710:intron 35.0%
AGGAAAAAAAATTAGCCCAG+GGG - chr7_4:62745550-62745569 Msa1169710:intron 35.0%
GCAAATTACCATAATGGCAT+GGG + chr7_4:62745590-62745609 None:intergenic 35.0%
AGCAAATTACCATAATGGCA+TGG + chr7_4:62745591-62745610 None:intergenic 35.0%
ACGTCAGCAAATTACCATAA+TGG + chr7_4:62745596-62745615 None:intergenic 35.0%
!! ATTATGGTAATTTGCTGACG+TGG - chr7_4:62745595-62745614 Msa1169710:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - chr7_4:62745677-62745696 Msa1169710:CDS 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - chr7_4:62745678-62745697 Msa1169710:CDS 35.0%
ATCTTCAAATATACACCCTC+CGG + chr7_4:62745800-62745819 None:intergenic 35.0%
CTCGACCAAACAAGTAATAA+AGG + chr7_4:62745879-62745898 None:intergenic 35.0%
!!! TGGCAAGACACTTTTTTCAA+AGG - chr7_4:62745931-62745950 Msa1169710:intron 35.0%
TACACTTCTGACATTGTAGT+TGG - chr7_4:62746120-62746139 Msa1169710:intron 35.0%
GAAATTCATGGGAAACACTT+GGG + chr7_4:62746155-62746174 None:intergenic 35.0%
AGGTGATATGCGAAATTCAT+GGG + chr7_4:62746166-62746185 None:intergenic 35.0%
! AAGTTCATTGACTAAGCTAC+CGG - chr7_4:62746196-62746215 Msa1169710:intron 35.0%
TAAGCTACCGGACAAAAATA+TGG - chr7_4:62746208-62746227 Msa1169710:intron 35.0%
TTAACTAAGTTTGAACGGCT+AGG + chr7_4:62746481-62746500 None:intergenic 35.0%
!! GTAATGAGATTTTAGTCCGT+AGG + chr7_4:62746505-62746524 None:intergenic 35.0%
! GAGATTTAAGGTTTGGTAAC+TGG + chr7_4:62746759-62746778 None:intergenic 35.0%
AATTCCTCATACGAATCACA+GGG + chr7_4:62746811-62746830 None:intergenic 35.0%
TAATTCCTCATACGAATCAC+AGG + chr7_4:62746812-62746831 None:intergenic 35.0%
CGTATGAGGAATTAACAAAG+GGG - chr7_4:62746818-62746837 Msa1169710:intron 35.0%
!! TTGAGTGTGTCGATTATGTT+GGG + chr7_4:62746882-62746901 None:intergenic 35.0%
!! TTTGAGTGTGTCGATTATGT+TGG + chr7_4:62746883-62746902 None:intergenic 35.0%
TGAAAGTGGGTAACATGAAA+GGG - chr7_4:62746954-62746973 Msa1169710:intron 35.0%
TAAGTCTAAAGACTTACACC+TGG - chr7_4:62747149-62747168 Msa1169710:intron 35.0%
GATGTACAATACTTACGCTT+TGG - chr7_4:62747532-62747551 Msa1169710:intron 35.0%
! TGCATTTGGGACTATAAAGT+GGG + chr7_4:62747576-62747595 None:intergenic 35.0%
! TTGCATTTGGGACTATAAAG+TGG + chr7_4:62747577-62747596 None:intergenic 35.0%
! TGCATTTGGGACTATAAAGT+GGG + chr7_4:62747576-62747595 None:intergenic 35.0%
! TTGCATTTGGGACTATAAAG+TGG + chr7_4:62747577-62747596 None:intergenic 35.0%
TGTTGTCTTGTCTTGCATTT+GGG + chr7_4:62747623-62747642 None:intergenic 35.0%
ATCAGATCTGTCATATTCCT+TGG + chr7_4:62747971-62747990 None:intergenic 35.0%
AAGGAATATGACAGATCTGA+TGG - chr7_4:62747970-62747989 Msa1169710:intron 35.0%
TATGACAGATCTGATGGTTA+CGG - chr7_4:62747976-62747995 Msa1169710:intron 35.0%
TGAGATGAAAAAGTCTGCAA+CGG - chr7_4:62748080-62748099 Msa1169710:intron 35.0%
! TTTGAGTGAAAATTTTGGGC+TGG - chr7_4:62748130-62748149 Msa1169710:intron 35.0%
!! AAAATTTTGGGCTGGATTGT+GGG - chr7_4:62748138-62748157 Msa1169710:intron 35.0%
GCCCATTATACACATACTAT+TGG + chr7_4:62748214-62748233 None:intergenic 35.0%
GTGTAAAGTATGGATATACG+GGG - chr7_4:62748240-62748259 Msa1169710:intron 35.0%
CTCATAAGTTGTCAACCAAA+TGG + chr7_4:62748506-62748525 None:intergenic 35.0%
AATGCATACATGTCCTATTC+AGG - chr7_4:62749108-62749127 Msa1169710:intron 35.0%
TTTGTACACTTGTGACATTG+TGG - chr7_4:62749232-62749251 Msa1169710:intron 35.0%
ATAATACTTGGGTGACATTG+TGG + chr7_4:62749284-62749303 None:intergenic 35.0%
GAATAGGAGGGATAATACTT+GGG + chr7_4:62749295-62749314 None:intergenic 35.0%
TGAATAGGAGGGATAATACT+TGG + chr7_4:62749296-62749315 None:intergenic 35.0%
TTGGAGAGAATACAATCGAA+TGG - chr7_4:62749345-62749364 Msa1169710:intron 35.0%
ATACAATCGAATGGAGAAAG+TGG - chr7_4:62749354-62749373 Msa1169710:intron 35.0%
!! ATGGAGAAAGTGGTCATTTT+AGG - chr7_4:62749364-62749383 Msa1169710:intron 35.0%
GAAGTAGCTAAGTACAAACA+TGG + chr7_4:62749506-62749525 None:intergenic 35.0%
GCTACTTCAATCTATGTCAT+CGG - chr7_4:62749518-62749537 Msa1169710:intron 35.0%
TTCTTGCAGCAATGATAACA+TGG + chr7_4:62749897-62749916 None:intergenic 35.0%
AAGAAACATTGAATCTGCAG+AGG - chr7_4:62749912-62749931 Msa1169710:intron 35.0%
TCATGTGAGCTTAAATCAGT+TGG - chr7_4:62750287-62750306 Msa1169710:intron 35.0%
AATATTGGCAGAAACAATGC+TGG - chr7_4:62750661-62750680 Msa1169710:intron 35.0%
CAATTTGCAACAAACCATCT+TGG - chr7_4:62750730-62750749 Msa1169710:intron 35.0%
GCTGCAAATGTAAGAAAAAG+TGG + chr7_4:62750812-62750831 None:intergenic 35.0%
! ATGTGATTAACCAAGTGTTG+TGG - chr7_4:62750970-62750989 Msa1169710:intron 35.0%
GAAGATTTGTCAAGAGGAAA+TGG + chr7_4:62751123-62751142 None:intergenic 35.0%
CAAGAAGAAGATTTGTCAAG+AGG + chr7_4:62751129-62751148 None:intergenic 35.0%
AAACAAACTGCAAAAGCAAC+TGG - chr7_4:62751157-62751176 Msa1169710:intron 35.0%
! GTGACATTTTGCATCAGTAT+AGG + chr7_4:62752484-62752503 None:intergenic 35.0%
!!! TTTGGGTGCTTTTAATTTGC+AGG - chr7_4:62752558-62752577 Msa1169710:intron 35.0%
!!! TTGGGTGCTTTTAATTTGCA+GGG - chr7_4:62752559-62752578 Msa1169710:intron 35.0%
TATGCTTGCCCGTTTATTTA+CGG - chr7_4:62752826-62752845 Msa1169710:intron 35.0%
ATCACAATAACACACGTGTT+TGG + chr7_4:62752880-62752899 None:intergenic 35.0%
CCTATAATCACTGCCACATT+TGG + chr7_4:62743836-62743855 None:intergenic 40.0%
CCAAATGTGGCAGTGATTAT+AGG - chr7_4:62743833-62743852 Msa1169710:three_prime_UTR 40.0%
ATGGGACCAAGTACTTGATT+AGG + chr7_4:62744081-62744100 None:intergenic 40.0%
! ATAGGATAGATTTGAGGTGG+GGG + chr7_4:62744131-62744150 None:intergenic 40.0%
GGCTAACTTTGAACAATGGT+GGG - chr7_4:62744257-62744276 Msa1169710:intron 40.0%
AACACTACCTGTGATGATTG+CGG + chr7_4:62744381-62744400 None:intergenic 40.0%
GAGTCGGCCTTGAATTTAAT+AGG + chr7_4:62744921-62744940 None:intergenic 40.0%
! TTAAATTCAAGGCCGACTCA+AGG - chr7_4:62744922-62744941 Msa1169710:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + chr7_4:62745782-62745801 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr7_4:62745781-62745800 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG - chr7_4:62745186-62745205 Msa1169710:CDS 40.0%
GTTATTCGTCCCTGCAAATA+GGG - chr7_4:62745187-62745206 Msa1169710:CDS 40.0%
TTATTCGTCCCTGCAAATAG+GGG - chr7_4:62745188-62745207 Msa1169710:CDS 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + chr7_4:62745662-62745681 None:intergenic 40.0%
! GCAGTCATTAACTTGGTCAA+GGG + chr7_4:62745290-62745309 None:intergenic 40.0%
!!! AAATTAGCCCAGGGGTATTT+TGG - chr7_4:62745558-62745577 Msa1169710:intron 40.0%
GAATTGACCAAAATACCCCT+GGG + chr7_4:62745568-62745587 None:intergenic 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - chr7_4:62745662-62745681 Msa1169710:intron 40.0%
TTATTCGTCCCTGCAAATAG+GGG + chr7_4:62745188-62745207 None:intergenic 40.0%
GTTATTCGTCCCTGCAAATA+GGG + chr7_4:62745187-62745206 None:intergenic 40.0%
TGTTATTCGTCCCTGCAAAT+AGG + chr7_4:62745186-62745205 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr7_4:62745781-62745800 Msa1169710:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr7_4:62745782-62745801 Msa1169710:intron 40.0%
TACTTGTTTGGTCGAGACTT+TGG - chr7_4:62745883-62745902 Msa1169710:intron 40.0%
CGAAATTCATGGGAAACACT+TGG + chr7_4:62746156-62746175 None:intergenic 40.0%
GAGGTGATATGCGAAATTCA+TGG + chr7_4:62746167-62746186 None:intergenic 40.0%
AAGTGGAAAAGACTTACACC+TGG + chr7_4:62746449-62746468 None:intergenic 40.0%
AAGTTTGAACGGCTAGGATT+TGG + chr7_4:62746475-62746494 None:intergenic 40.0%
ATCACAGGGTTGTATTGGAT+GGG + chr7_4:62746797-62746816 None:intergenic 40.0%
AATCACAGGGTTGTATTGGA+TGG + chr7_4:62746798-62746817 None:intergenic 40.0%
TACGAATCACAGGGTTGTAT+TGG + chr7_4:62746802-62746821 None:intergenic 40.0%
!! AGGGGAATAAGATGGATTGT+TGG - chr7_4:62746836-62746855 Msa1169710:intron 40.0%
!! TGAGTGTGTCGATTATGTTG+GGG + chr7_4:62746881-62746900 None:intergenic 40.0%
CTGAAAGTGGGTAACATGAA+AGG - chr7_4:62746953-62746972 Msa1169710:intron 40.0%
GGGTAACATGAAAGGGATAT+CGG - chr7_4:62746961-62746980 Msa1169710:intron 40.0%
! CAGAATTAGGGGTGTGAATT+TGG - chr7_4:62747001-62747020 Msa1169710:intron 40.0%
TAGTTTGAACGGTTAGGATC+TGG - chr7_4:62747124-62747143 Msa1169710:intron 40.0%
! GCATTTGGGACTATAAAGTG+GGG + chr7_4:62747575-62747594 None:intergenic 40.0%
ATAGTCCCAAATGCAAGACA+AGG - chr7_4:62747581-62747600 Msa1169710:intron 40.0%
! GCATTTGGGACTATAAAGTG+GGG + chr7_4:62747575-62747594 None:intergenic 40.0%
GTGTTGTCTTGTCTTGCATT+TGG + chr7_4:62747624-62747643 None:intergenic 40.0%
TGAGTTTGAGCATGTCGTAT+AGG - chr7_4:62747663-62747682 Msa1169710:intron 40.0%
TTTGAGCATGTCGTATAGGA+AGG - chr7_4:62747667-62747686 Msa1169710:intron 40.0%
GATGTTAAAGACGACAGATC+TGG - chr7_4:62747914-62747933 Msa1169710:intron 40.0%
AGAAGAAGATGAATAGGCCA+AGG - chr7_4:62747951-62747970 Msa1169710:intron 40.0%
TGGCACACATGAATGAACTA+GGG - chr7_4:62748107-62748126 Msa1169710:intron 40.0%
!! GAAAATTTTGGGCTGGATTG+TGG - chr7_4:62748137-62748156 Msa1169710:intron 40.0%
GGGCTTAAGTGTGTAAAGTA+TGG - chr7_4:62748230-62748249 Msa1169710:intron 40.0%
TAAAGTATGGATATACGGGG+CGG - chr7_4:62748243-62748262 Msa1169710:intron 40.0%
AACATATGTTTCCTTAGGGC+TGG + chr7_4:62748433-62748452 None:intergenic 40.0%
TGAAGTTGTCGACGAATGAT+CGG + chr7_4:62750020-62750039 None:intergenic 40.0%
! TGATTAACCAAGTGTTGTGG+TGG - chr7_4:62750973-62750992 Msa1169710:intron 40.0%
TTATACACCACCACAACACT+TGG + chr7_4:62750983-62751002 None:intergenic 40.0%
TGCAAAAGCAACTGGAATAG+AGG - chr7_4:62751165-62751184 Msa1169710:intron 40.0%
GCAAAAGCAACTGGAATAGA+GGG - chr7_4:62751166-62751185 Msa1169710:intron 40.0%
CAAAAGCAACTGGAATAGAG+GGG - chr7_4:62751167-62751186 Msa1169710:intron 40.0%
TATTCTAGCAAGAAGGCCTA+TGG - chr7_4:62751377-62751396 Msa1169710:intron 40.0%
!! AGGTCAAAGAAGCACTAGTT+GGG + chr7_4:62751462-62751481 None:intergenic 40.0%
!! AAGGTCAAAGAAGCACTAGT+TGG + chr7_4:62751463-62751482 None:intergenic 40.0%
CCATAACTAGTCCACTAGTT+AGG + chr7_4:62751594-62751613 None:intergenic 40.0%
!! CCTAACTAGTGGACTAGTTA+TGG - chr7_4:62751591-62751610 Msa1169710:intron 40.0%
TCACATTTGTCAACAGGAAG+AGG - chr7_4:62751637-62751656 Msa1169710:intron 40.0%
CACATTTGTCAACAGGAAGA+GGG - chr7_4:62751638-62751657 Msa1169710:intron 40.0%
! TCACTGTCTAAAATGCTCAC+CGG - chr7_4:62751977-62751996 Msa1169710:intron 40.0%
TTCCATCCACAACAAGATAC+CGG + chr7_4:62751999-62752018 None:intergenic 40.0%
!! GAGATAGAAGGTTAAGTTGG+TGG + chr7_4:62752033-62752052 None:intergenic 40.0%
!! TGTAACTGGGAAGTACTTTG+TGG - chr7_4:62752627-62752646 Msa1169710:intron 40.0%
!! ATTGACCACACTTTGCTGTT+TGG - chr7_4:62752753-62752772 Msa1169710:intron 40.0%
! ACACGTGTGTTATTGTGATG+TGG - chr7_4:62752881-62752900 Msa1169710:five_prime_UTR 40.0%
TTGAGCTATTGAAGGTTGCC+AGG + chr7_4:62743528-62743547 None:intergenic 45.0%
TTGGGAGGTTGAGCTATTGA+AGG + chr7_4:62743536-62743555 None:intergenic 45.0%
CACAGGCATATATCTTCCAG+TGG - chr7_4:62743667-62743686 Msa1169710:three_prime_UTR 45.0%
GTTGTAGCACAAAACACCAC+TGG + chr7_4:62743686-62743705 None:intergenic 45.0%
ATGTGTGTCACAACTCAGAG+AGG - chr7_4:62744210-62744229 Msa1169710:intron 45.0%
TGTCACAACTCAGAGAGGAA+AGG - chr7_4:62744215-62744234 Msa1169710:intron 45.0%
GGGCTAACTTTGAACAATGG+TGG - chr7_4:62744256-62744275 Msa1169710:intron 45.0%
AACCTTACCGCAATCATCAC+AGG - chr7_4:62744371-62744390 Msa1169710:intron 45.0%
TACCTGTGATGATTGCGGTA+AGG + chr7_4:62744376-62744395 None:intergenic 45.0%
TAGATCTCACTTACACCCTC+CGG - chr7_4:62745062-62745081 Msa1169710:intron 45.0%
TTTAGCGACCCCTATTTGCA+GGG + chr7_4:62745199-62745218 None:intergenic 45.0%
! TTTTAGCGACCCCTATTTGC+AGG + chr7_4:62745200-62745219 None:intergenic 45.0%
! GGCAGTCATTAACTTGGTCA+AGG + chr7_4:62745291-62745310 None:intergenic 45.0%
TGACGTGGCAGTCATTAACT+TGG + chr7_4:62745297-62745316 None:intergenic 45.0%
GGAATTGACGAAAATACCCC+TGG - chr7_4:62745338-62745357 Msa1169710:intron 45.0%
GGAATTGACCAAAATACCCC+TGG + chr7_4:62745569-62745588 None:intergenic 45.0%
GGTCAATTCCCATGCCATTA+TGG - chr7_4:62745579-62745598 Msa1169710:intron 45.0%
CAGTGATTAACTGCGGTCAA+GGG - chr7_4:62745618-62745637 Msa1169710:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG - chr7_4:62745708-62745727 Msa1169710:CDS 45.0%
TTAAGCGACCCCTATTTGCA+GGG - chr7_4:62745709-62745728 Msa1169710:CDS 45.0%
TTGAAGATTAGTAGACCGGC+CGG - chr7_4:62745812-62745831 Msa1169710:intron 45.0%
TTTATCAATTCCGATCCGGC+CGG + chr7_4:62745830-62745849 None:intergenic 45.0%
! AGACTTACACCTGGTGTCAA+CGG + chr7_4:62747158-62747177 None:intergenic 45.0%
ACAACCCTGTGATTCGTATG+AGG - chr7_4:62746804-62746823 Msa1169710:intron 45.0%
!! GAGTGTGTCGATTATGTTGG+GGG + chr7_4:62746880-62746899 None:intergenic 45.0%
! AGACTTACACCTGGTGTCAA+CGG - chr7_4:62747158-62747177 Msa1169710:intron 45.0%
GCTCGTTATTCTCAAACCGT+CGG + chr7_4:62747748-62747767 None:intergenic 45.0%
AACCGTAGCCCTTAAATGGA+CGG + chr7_4:62747776-62747795 None:intergenic 45.0%
CCATTTAAGGGCTACGGTTA+CGG - chr7_4:62747777-62747796 Msa1169710:intron 45.0%
! AGCAACCGATTCATCTTCCT+TGG + chr7_4:62748005-62748024 None:intergenic 45.0%
GATGAAAAAGTCTGCAACGG+CGG - chr7_4:62748083-62748102 Msa1169710:intron 45.0%
ATGAAAAAGTCTGCAACGGC+GGG - chr7_4:62748084-62748103 Msa1169710:intron 45.0%
GTGGCACACATGAATGAACT+AGG - chr7_4:62748106-62748125 Msa1169710:intron 45.0%
!! TTGATGGTTCGGTTAAGGAC+GGG + chr7_4:62748319-62748338 None:intergenic 45.0%
!! GTTGATGGTTCGGTTAAGGA+CGG + chr7_4:62748320-62748339 None:intergenic 45.0%
GCAAGCATACAAAGGGTAAC+GGG + chr7_4:62748374-62748393 None:intergenic 45.0%
CGCAAGCATACAAAGGGTAA+CGG + chr7_4:62748375-62748394 None:intergenic 45.0%
CGTTACCCTTTGTATGCTTG+CGG - chr7_4:62748373-62748392 Msa1169710:intron 45.0%
GTTACCCTTTGTATGCTTGC+GGG - chr7_4:62748374-62748393 Msa1169710:intron 45.0%
CATGTATGCATTCTCCGCTT+CGG + chr7_4:62749100-62749119 None:intergenic 45.0%
TGTCCTATTCAGGTAGCACT+TGG - chr7_4:62749118-62749137 Msa1169710:intron 45.0%
GTCCTATTCAGGTAGCACTT+GGG - chr7_4:62749119-62749138 Msa1169710:intron 45.0%
!! GACATTGTGGTTGGTGACAT+TGG + chr7_4:62749271-62749290 None:intergenic 45.0%
TACTTGGGTGACATTGTGGT+TGG + chr7_4:62749280-62749299 None:intergenic 45.0%
!! TACCAAGTGTTGGGACTCAT+GGG + chr7_4:62749764-62749783 None:intergenic 45.0%
!! TTACCAAGTGTTGGGACTCA+TGG + chr7_4:62749765-62749784 None:intergenic 45.0%
ATTAATGCAGGAGGAGCAAG+TGG - chr7_4:62749829-62749848 Msa1169710:intron 45.0%
! GTTGGAGACAACAAGAGTGT+TGG - chr7_4:62749858-62749877 Msa1169710:intron 45.0%
!! CAACAAGAGTGTTGGCTCTT+AGG - chr7_4:62749866-62749885 Msa1169710:intron 45.0%
!! AAGAGTGTTGGCTCTTAGGA+AGG - chr7_4:62749870-62749889 Msa1169710:intron 45.0%
AGAGAACAAATGTGCACGAG+TGG - chr7_4:62749957-62749976 Msa1169710:intron 45.0%
GGACAGACTTTGTTGAGCAT+AGG + chr7_4:62749999-62750018 None:intergenic 45.0%
GGTGTGTCACATTTGTCAAC+AGG - chr7_4:62751631-62751650 Msa1169710:intron 45.0%
GAGGAGTCATTATCACTCCT+GGG + chr7_4:62751691-62751710 None:intergenic 45.0%
AGAGGAGTCATTATCACTCC+TGG + chr7_4:62751692-62751711 None:intergenic 45.0%
CATATGGAAGAACGTTCCAC+AGG - chr7_4:62752428-62752447 Msa1169710:intron 45.0%
GAGTGCAACATAACATGTCG+TGG + chr7_4:62752590-62752609 None:intergenic 45.0%
CAGTTACACCTTTCACGCTT+GGG + chr7_4:62752615-62752634 None:intergenic 45.0%
! CAAGCGTGAAAGGTGTAACT+GGG - chr7_4:62752614-62752633 Msa1169710:intron 45.0%
GTGAACCAAACAGCAAAGTG+TGG + chr7_4:62752761-62752780 None:intergenic 45.0%
ATGCCAGTCGTGCAAATTCG+TGG - chr7_4:62743969-62743988 Msa1169710:CDS 50.0%
TGCCAGTCGTGCAAATTCGT+GGG - chr7_4:62743970-62743989 Msa1169710:CDS 50.0%
!! TCGTTGATAACAGGGATGGC+TGG - chr7_4:62744287-62744306 Msa1169710:intron 50.0%
GAAGCTGATCCAAACCCACT+TGG + chr7_4:62744314-62744333 None:intergenic 50.0%
ATCAGCTTCAACTGCAGAGC+AGG - chr7_4:62744325-62744344 Msa1169710:intron 50.0%
ACTGCAGAGCAGGTTACTGA+AGG - chr7_4:62744335-62744354 Msa1169710:intron 50.0%
GACGTGGCAGTGATTAACTG+CGG - chr7_4:62745611-62745630 Msa1169710:intron 50.0%
GCAGTGATTAACTGCGGTCA+AGG - chr7_4:62745617-62745636 Msa1169710:intron 50.0%
GGGAAACACTTGGGTGACAT+TGG + chr7_4:62746146-62746165 None:intergenic 50.0%
!! CGGCTAGGATTTGGTGTAAG+TGG + chr7_4:62746466-62746485 None:intergenic 50.0%
GAGCATGTCGTATAGGAAGG+TGG - chr7_4:62747670-62747689 Msa1169710:intron 50.0%
TCGTATAGGAAGGTGGACAG+CGG - chr7_4:62747677-62747696 Msa1169710:intron 50.0%
TATTCTCAAACCGTCGGTCC+CGG + chr7_4:62747742-62747761 None:intergenic 50.0%
TGCCGTCCATTTAAGGGCTA+CGG - chr7_4:62747771-62747790 Msa1169710:intron 50.0%
CCGTAACCGTAGCCCTTAAA+TGG + chr7_4:62747780-62747799 None:intergenic 50.0%
TTTAAGGGCTACGGTTACGG+CGG - chr7_4:62747780-62747799 Msa1169710:intron 50.0%
! TTACGGGTTGTCGGTGGTTA+CGG - chr7_4:62747803-62747822 Msa1169710:intron 50.0%
GACAGATCTGATGGTTACGG+TGG - chr7_4:62747979-62747998 Msa1169710:intron 50.0%
GGTGGCCAAGGAAGATGAAT+CGG - chr7_4:62747997-62748016 Msa1169710:intron 50.0%
ATGGATATACGGGGCGGTTA+CGG - chr7_4:62748249-62748268 Msa1169710:intron 50.0%
!! AGCATACAAAGGGTAACGGG+CGG + chr7_4:62748371-62748390 None:intergenic 50.0%
TCCTTAGGGCTGGACAGATT+GGG + chr7_4:62748423-62748442 None:intergenic 50.0%
TTCCTTAGGGCTGGACAGAT+TGG + chr7_4:62748424-62748443 None:intergenic 50.0%
ATGCATTCTCCGCTTCGGTT+TGG + chr7_4:62749095-62749114 None:intergenic 50.0%
CACCCAAGTGCTACCTGAAT+AGG + chr7_4:62749124-62749143 None:intergenic 50.0%
GTAGCACTTGGGTGACATTG+TGG - chr7_4:62749130-62749149 Msa1169710:intron 50.0%
CACTTGGGTGACATTGTGGT+TGG - chr7_4:62749134-62749153 Msa1169710:intron 50.0%
CAGGAGGAGCAAGTGGTATA+GGG - chr7_4:62749836-62749855 Msa1169710:intron 50.0%
AGGAGCAAGTGGTATAGGGT+TGG - chr7_4:62749840-62749859 Msa1169710:intron 50.0%
! CCTCCTCTGAGAGTTTGAAG+GGG + chr7_4:62750699-62750718 None:intergenic 50.0%
! CCCTCCTCTGAGAGTTTGAA+GGG + chr7_4:62750700-62750719 None:intergenic 50.0%
CCCTTCAAACTCTCAGAGGA+GGG - chr7_4:62750697-62750716 Msa1169710:intron 50.0%
! TCCCTCCTCTGAGAGTTTGA+AGG + chr7_4:62750701-62750720 None:intergenic 50.0%
AAGCAACTGGAATAGAGGGG+AGG - chr7_4:62751170-62751189 Msa1169710:intron 50.0%
GGCTAACTTGGACTGTCCAT+AGG + chr7_4:62751396-62751415 None:intergenic 50.0%
GAGTCATTATCACTCCTGGG+TGG + chr7_4:62751688-62751707 None:intergenic 50.0%
TGCTCACCGGTATCTTGTTG+TGG - chr7_4:62751990-62752009 Msa1169710:intron 50.0%
! CACCGGTATCTTGTTGTGGA+TGG - chr7_4:62751994-62752013 Msa1169710:intron 50.0%
TTACACCTTTCACGCTTGGG+TGG + chr7_4:62752612-62752631 None:intergenic 50.0%
CCAGTTACACCTTTCACGCT+TGG + chr7_4:62752616-62752635 None:intergenic 50.0%
! CCAAGCGTGAAAGGTGTAAC+TGG - chr7_4:62752613-62752632 Msa1169710:intron 50.0%
CACCCACGAATTTGCACGAC+TGG + chr7_4:62743975-62743994 None:intergenic 55.0%
! GGGGCGTAGGAAGGTATAAG+CGG + chr7_4:62744112-62744131 None:intergenic 55.0%
! TAGATTTGAGGTGGGGGCGT+AGG + chr7_4:62744125-62744144 None:intergenic 55.0%
! ATGGCTGGTCCAAGTGGGTT+TGG - chr7_4:62744302-62744321 Msa1169710:intron 55.0%
GATTAGTAGACCGGCCGGAT+CGG - chr7_4:62745817-62745836 Msa1169710:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG - chr7_4:62746428-62746447 Msa1169710:CDS 55.0%
GGGCGCCTTGTCTTGCATTT+GGG + chr7_4:62747589-62747608 None:intergenic 55.0%
ATAGGAAGGTGGACAGCGGT+CGG - chr7_4:62747681-62747700 Msa1169710:intron 55.0%
AGCCGCTGCCGTCCATTTAA+GGG - chr7_4:62747765-62747784 Msa1169710:intron 55.0%
AGCCCTTAAATGGACGGCAG+CGG + chr7_4:62747770-62747789 None:intergenic 55.0%
! TTACGGCGGTTACGGGTTGT+CGG - chr7_4:62747794-62747813 Msa1169710:intron 55.0%
TCTGATGGTTACGGTGGCCA+AGG - chr7_4:62747985-62748004 Msa1169710:intron 55.0%
AAAAAGTCTGCAACGGCGGG+TGG - chr7_4:62748087-62748106 Msa1169710:intron 55.0%
GGGGCGGTTACGGTTATTCA+CGG - chr7_4:62748259-62748278 Msa1169710:intron 55.0%
GCGGTTACGGTTATTCACGG+TGG - chr7_4:62748262-62748281 Msa1169710:intron 55.0%
! TAAGGACGGGTTCGAACGGT+CGG + chr7_4:62748306-62748325 None:intergenic 55.0%
! CGGTTAAGGACGGGTTCGAA+CGG + chr7_4:62748310-62748329 None:intergenic 55.0%
!! GCGGGTTGATGGTTCGGTTA+AGG + chr7_4:62748324-62748343 None:intergenic 55.0%
!! GTTCGTGCGGGTTGATGGTT+CGG + chr7_4:62748330-62748349 None:intergenic 55.0%
!! CATACAAAGGGTAACGGGCG+GGG + chr7_4:62748369-62748388 None:intergenic 55.0%
!! GCATACAAAGGGTAACGGGC+GGG + chr7_4:62748370-62748389 None:intergenic 55.0%
AAAGGCGGACCAAACCGAAG+CGG - chr7_4:62749083-62749102 Msa1169710:intron 55.0%
CTCCCATGAGTCCCAACACT+TGG - chr7_4:62749759-62749778 Msa1169710:intron 55.0%
GCAGGAGGAGCAAGTGGTAT+AGG - chr7_4:62749835-62749854 Msa1169710:intron 55.0%
CTGCCCCTTCAAACTCTCAG+AGG - chr7_4:62750693-62750712 Msa1169710:intron 55.0%
CCCCTTCAAACTCTCAGAGG+AGG - chr7_4:62750696-62750715 Msa1169710:intron 55.0%
TGAACTCTCTCATCGCCTGC+AGG - chr7_4:62751433-62751452 Msa1169710:intron 55.0%
GCACTAGTTGGGTTACCTGC+AGG + chr7_4:62751451-62751470 None:intergenic 55.0%
! TTTGAGGTGGGGGCGTAGGA+AGG + chr7_4:62744121-62744140 None:intergenic 60.0%
! ACAGGGATGGCTGGTCCAAG+TGG - chr7_4:62744296-62744315 Msa1169710:intron 60.0%
! CAGGGATGGCTGGTCCAAGT+GGG - chr7_4:62744297-62744316 Msa1169710:intron 60.0%
AGTCGGGATCCGTTGACACC+AGG + chr7_4:62747170-62747189 None:intergenic 60.0%
! GGGGCGCCTTGTCTTGCATT+TGG + chr7_4:62747590-62747609 None:intergenic 60.0%
! CGGAATTTGGGACCGAACCC+CGG + chr7_4:62747713-62747732 None:intergenic 60.0%
! CGGGGTTCGGTCCCAAATTC+CGG - chr7_4:62747711-62747730 Msa1169710:intron 60.0%
GTCCCAAATTCCGGAACCGC+CGG - chr7_4:62747720-62747739 Msa1169710:intron 60.0%
TCCCAAATTCCGGAACCGCC+GGG - chr7_4:62747721-62747740 Msa1169710:intron 60.0%
TCCCGGCGGTTCCGGAATTT+GGG + chr7_4:62747725-62747744 None:intergenic 60.0%
GAGCCGCTGCCGTCCATTTA+AGG - chr7_4:62747764-62747783 Msa1169710:intron 60.0%
GGCTACGGTTACGGCGGTTA+CGG - chr7_4:62747786-62747805 Msa1169710:intron 60.0%
GCTACGGTTACGGCGGTTAC+GGG - chr7_4:62747787-62747806 Msa1169710:intron 60.0%
TGTCGGTGGTTACGGTCGAG+CGG - chr7_4:62747811-62747830 Msa1169710:intron 60.0%
!! GTCGAGCGGCCGGTTTGTTT+CGG - chr7_4:62747825-62747844 Msa1169710:intron 60.0%
CCGGCCCGCAAGCATACAAA+GGG + chr7_4:62748381-62748400 None:intergenic 60.0%
CCCTTTGTATGCTTGCGGGC+CGG - chr7_4:62748378-62748397 Msa1169710:intron 60.0%
GCCCAATCTGTCCAGCCCTA+AGG - chr7_4:62748419-62748438 Msa1169710:intron 60.0%
ACAGCCAACTCTGTCCACCC+AGG - chr7_4:62751671-62751690 Msa1169710:intron 60.0%
CACTCCTGGGTGGACAGAGT+TGG + chr7_4:62751678-62751697 None:intergenic 60.0%
GCACTCCACCCAAGCGTGAA+AGG - chr7_4:62752604-62752623 Msa1169710:intron 60.0%
! AGGTGGACAGCGGTCGGTTC+CGG - chr7_4:62747687-62747706 Msa1169710:intron 65.0%
! ATTTGGGACCGAACCCCGGC+CGG + chr7_4:62747709-62747728 None:intergenic 65.0%
GTCCCGGCGGTTCCGGAATT+TGG + chr7_4:62747726-62747745 None:intergenic 65.0%
TCTCAAACCGTCGGTCCCGG+CGG + chr7_4:62747739-62747758 None:intergenic 65.0%
CGAACGGTCGGTCACGGGTT+TGG + chr7_4:62748294-62748313 None:intergenic 65.0%
GGGTTCGAACGGTCGGTCAC+GGG + chr7_4:62748299-62748318 None:intergenic 65.0%
CGGGTTCGAACGGTCGGTCA+CGG + chr7_4:62748300-62748319 None:intergenic 65.0%
GCCGGCCCGCAAGCATACAA+AGG + chr7_4:62748382-62748401 None:intergenic 65.0%
TTGTATGCTTGCGGGCCGGC+CGG - chr7_4:62748382-62748401 Msa1169710:intron 65.0%
TGGGCCGACCCGTCCAAAAC+CGG + chr7_4:62748404-62748423 None:intergenic 65.0%
! CGGCGGTTACGGGTTGTCGG+TGG - chr7_4:62747797-62747816 Msa1169710:intron 70.0%
GGTGGTTACGGTCGAGCGGC+CGG - chr7_4:62747815-62747834 Msa1169710:intron 70.0%
! GGCGGGTTCGTGCGGGTTGA+TGG + chr7_4:62748335-62748354 None:intergenic 70.0%
!! ACCGGTTCGGCGGGTTCGTG+CGG + chr7_4:62748343-62748362 None:intergenic 70.0%
CCGACCCGTCCAAAACCGGC+CGG + chr7_4:62748400-62748419 None:intergenic 70.0%
!!! CCGGCCGGTTTTGGACGGGT+CGG - chr7_4:62748397-62748416 Msa1169710:intron 70.0%
! GGACAGCGGTCGGTTCCGGC+CGG - chr7_4:62747691-62747710 Msa1169710:intron 75.0%
! GACAGCGGTCGGTTCCGGCC+GGG - chr7_4:62747692-62747711 Msa1169710:intron 75.0%
! ACAGCGGTCGGTTCCGGCCG+GGG - chr7_4:62747693-62747712 Msa1169710:intron 75.0%
! GGTCGGTTCCGGCCGGGGTT+CGG - chr7_4:62747698-62747717 Msa1169710:intron 75.0%
TCCGGAACCGCCGGGACCGA+CGG - chr7_4:62747729-62747748 Msa1169710:intron 75.0%
ACCGTCGGTCCCGGCGGTTC+CGG + chr7_4:62747733-62747752 None:intergenic 75.0%
!! CCGGTTCGGCGGGTTCGTGC+GGG + chr7_4:62748342-62748361 None:intergenic 75.0%
CCCGCACGAACCCGCCGAAC+CGG - chr7_4:62748339-62748358 Msa1169710:intron 75.0%
ACGGGCGGGGCGAACCGGTT+CGG + chr7_4:62748356-62748375 None:intergenic 75.0%
!! GGGTAACGGGCGGGGCGAAC+CGG + chr7_4:62748361-62748380 None:intergenic 75.0%
!! GCTTGCGGGCCGGCCGGTTT+TGG - chr7_4:62748388-62748407 Msa1169710:intron 75.0%
!!! GCGGGCCGGCCGGTTTTGGA+CGG - chr7_4:62748392-62748411 Msa1169710:intron 75.0%
!!! CGGGCCGGCCGGTTTTGGAC+GGG - chr7_4:62748393-62748412 Msa1169710:intron 75.0%
!!! GCGGGGCGAACCGGTTCGGC+GGG + chr7_4:62748352-62748371 None:intergenic 80.0%
!!! GGCGGGGCGAACCGGTTCGG+CGG + chr7_4:62748353-62748372 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 62743466 62752955 62743466 ID=Msa1169710;Name=Msa1169710
chr7_4 mRNA 62743466 62752955 62743466 ID=Msa1169710-mRNA-1;Parent=Msa1169710;Name=Msa1169710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=363|1|1|1|0.85|0.75|8|488|272
chr7_4 exon 62743466 62744018 62743466 ID=Msa1169710-mRNA-1:exon:19989;Parent=Msa1169710-mRNA-1
chr7_4 exon 62744684 62744768 62744684 ID=Msa1169710-mRNA-1:exon:19988;Parent=Msa1169710-mRNA-1
chr7_4 exon 62744967 62745045 62744967 ID=Msa1169710-mRNA-1:exon:19987;Parent=Msa1169710-mRNA-1
chr7_4 exon 62745146 62745302 62745146 ID=Msa1169710-mRNA-1:exon:19986;Parent=Msa1169710-mRNA-1
chr7_4 exon 62745670 62745749 62745670 ID=Msa1169710-mRNA-1:exon:19985;Parent=Msa1169710-mRNA-1
chr7_4 exon 62746351 62746582 62746351 ID=Msa1169710-mRNA-1:exon:19984;Parent=Msa1169710-mRNA-1
chr7_4 exon 62752029 62752389 62752029 ID=Msa1169710-mRNA-1:exon:19983;Parent=Msa1169710-mRNA-1
chr7_4 exon 62752833 62752955 62752833 ID=Msa1169710-mRNA-1:exon:19982;Parent=Msa1169710-mRNA-1
chr7_4 five_prime_UTR 62752833 62752955 62752833 ID=Msa1169710-mRNA-1:five_prime_utr;Parent=Msa1169710-mRNA-1
chr7_4 five_prime_UTR 62752150 62752389 62752150 ID=Msa1169710-mRNA-1:five_prime_utr;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62752029 62752149 62752029 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62746351 62746582 62746351 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62745670 62745749 62745670 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62745146 62745302 62745146 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62744967 62745045 62744967 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62744684 62744768 62744684 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 CDS 62743954 62744018 62743954 ID=Msa1169710-mRNA-1:cds;Parent=Msa1169710-mRNA-1
chr7_4 three_prime_UTR 62743466 62743953 62743466 ID=Msa1169710-mRNA-1:three_prime_utr;Parent=Msa1169710-mRNA-1
Gene Sequence

>Msa1169710

ATGGTGGGTGTAATATCGTTGATAACAGGGATGGCTGGTCCAAGTGGGTTTGGATCAGCTTCAACTGCAGAGCAGGTTACTGAAGGAATTGATGCTAGCAACCTTACCGCAATCATCACAGGAGGAGCAAGTGGTATAGGGTTGGAGACAACAAGAGTGTTGGCTCTTAGGAAGGTCCATGTTATCATTGCTGCAAGAAACATTGAATCTGCAGAGGAAGCCAAACAACAAATAACACAAGAGAACAAATGTGCACGAGTGGACATAATGAAACTTGACCTATGCTCAACAAAGTCTGTCCGATCATTCGTCGACAACTTCATTGCTCTTGATCTTCCTCTCAACATCTTAATAAACAATGCTGGAATAATGTTCTGCCCCTTCAAACTCTCAGAGGAGGGAATTGAGATGCAATTTGCAACAAACCATCTTGGCCATTTCCTCTTGACAAATCTTCTTCTTGACAAAATGAAACAAACTGCAAAAGCAACTGGAATAGAGGGGAGGATTATAAATCTATCATCAATTGCTCATAGATACACTTACTTTAGAAAGGGGATTAGATTTGAGAAGATCAATGATAAAAAAGGTTATTCTAGCAAGAAGGCCTATGGACAGTCCAAGTTAGCCAACATATTACATGCAAATGAACTCTCTCATCGCCTGCAGGAAGAGGGAGTGAATATCACAGCCAACTCTGTCCACCCAGGAGTGATAATGACTCCTCTCATGAGATATTCTTCTTACACAATGCACTTGTTAAAGATCTTCAGCTTTTACATATGGAAGAACGTTCCACAGGCATTTTATCTATCTTAA

Protein sequence

>Msa1169710

MVGVISLITGMAGPSGFGSASTAEQVTEGIDASNLTAIITGGASGIGLETTRVLALRKVHVIIAARNIESAEEAKQQITQENKCARVDIMKLDLCSTKSVRSFVDNFIALDLPLNILINNAGIMFCPFKLSEEGIEMQFATNHLGHFLLTNLLLDKMKQTAKATGIEGRIINLSSIAHRYTYFRKGIRFEKINDKKGYSSKKAYGQSKLANILHANELSHRLQEEGVNITANSVHPGVIMTPLMRYSSYTMHLLKIFSFYIWKNVPQAFYLS*