Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274290 | XP_003593786.1 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274290 | sp|Q8LFP7|NIP12_ARATH | 71.206 | 257 | 67 | 1 | 24 | 273 | 38 | 294 | 3.87e-131 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0274290 | -0.802702 | 4.948030e-49 | -8.615850e-47 |
| Msa0017510 | Msa0274290 | 0.838318 | 3.087846e-57 | -8.615850e-47 |
| Msa0024210 | Msa0274290 | -0.802654 | 5.062738e-49 | -8.615850e-47 |
| Msa0024680 | Msa0274290 | 0.800882 | 1.170005e-48 | -8.615850e-47 |
| Msa0032840 | Msa0274290 | -0.813876 | 2.050232e-51 | -8.615850e-47 |
| Msa0105420 | Msa0274290 | 0.816614 | 5.050163e-52 | -8.615850e-47 |
| Msa0110970 | Msa0274290 | 0.827990 | 1.152504e-54 | -8.615850e-47 |
| Msa0114540 | Msa0274290 | -0.820827 | 5.583168e-53 | -8.615850e-47 |
| Msa0120010 | Msa0274290 | -0.804995 | 1.652690e-49 | -8.615850e-47 |
| Msa0120020 | Msa0274290 | -0.809169 | 2.161120e-50 | -8.615850e-47 |
| Msa0120330 | Msa0274290 | 0.807525 | 4.844950e-50 | -8.615850e-47 |
| Msa0138820 | Msa0274290 | -0.808351 | 3.231720e-50 | -8.615850e-47 |
| Msa0140780 | Msa0274290 | 0.805839 | 1.099929e-49 | -8.615850e-47 |
| Msa0143080 | Msa0274290 | 0.810825 | 9.506868e-51 | -8.615850e-47 |
| Msa0148100 | Msa0274290 | 0.806117 | 9.612350e-50 | -8.615850e-47 |
| Msa0157290 | Msa0274290 | 0.838951 | 2.118994e-57 | -8.615850e-47 |
| Msa0172350 | Msa0274290 | 0.806080 | 9.783966e-50 | -8.615850e-47 |
| Msa0194280 | Msa0274290 | 0.954400 | 3.219668e-112 | -8.615850e-47 |
| Msa0196130 | Msa0274290 | -0.806876 | 6.647146e-50 | -8.615850e-47 |
| Msa0197230 | Msa0274290 | 0.806645 | 7.437829e-50 | -8.615850e-47 |
| Msa0215320 | Msa0274290 | -0.831640 | 1.488612e-55 | -8.615850e-47 |
| Msa0230550 | Msa0274290 | -0.805495 | 1.298531e-49 | -8.615850e-47 |
| Msa0235980 | Msa0274290 | 0.931556 | 3.173048e-94 | -8.615850e-47 |
| Msa0236980 | Msa0274290 | 0.806578 | 7.686496e-50 | -8.615850e-47 |
| Msa0238890 | Msa0274290 | 0.817447 | 3.282347e-52 | -8.615850e-47 |
| Msa0243100 | Msa0274290 | 0.800117 | 1.675503e-48 | -8.615850e-47 |
| Msa0259560 | Msa0274290 | 0.801300 | 9.610366e-49 | -8.615850e-47 |
| Msa0267760 | Msa0274290 | 0.805126 | 1.551814e-49 | -8.615850e-47 |
| Msa0274290 | Msa0287650 | 0.813489 | 2.494295e-51 | -8.615850e-47 |
| Msa0274290 | Msa0294560 | -0.821819 | 3.297340e-53 | -8.615850e-47 |
| Msa0274290 | Msa0314480 | 0.940094 | 4.192372e-100 | -8.615850e-47 |
| Msa0274290 | Msa0320100 | 0.802795 | 4.734826e-49 | -8.615850e-47 |
| Msa0274290 | Msa0344570 | 0.811681 | 6.198136e-51 | -8.615850e-47 |
| Msa0274290 | Msa0369570 | 0.802906 | 4.492561e-49 | -8.615850e-47 |
| Msa0274290 | Msa0378340 | 0.802672 | 5.020175e-49 | -8.615850e-47 |
| Msa0274290 | Msa0392490 | 0.813382 | 2.632722e-51 | -8.615850e-47 |
| Msa0274290 | Msa0393680 | 0.801021 | 1.095686e-48 | -8.615850e-47 |
| Msa0274290 | Msa0395790 | 0.806903 | 6.560812e-50 | -8.615850e-47 |
| Msa0274290 | Msa0402820 | 0.806198 | 9.243772e-50 | -8.615850e-47 |
| Msa0274290 | Msa0419820 | 0.810820 | 9.529043e-51 | -8.615850e-47 |
| Msa0274290 | Msa0425940 | 0.802338 | 5.882160e-49 | -8.615850e-47 |
| Msa0274290 | Msa0427690 | 0.806250 | 9.009523e-50 | -8.615850e-47 |
| Msa0274290 | Msa0436280 | -0.819220 | 1.302099e-52 | -8.615850e-47 |
| Msa0274290 | Msa0449830 | 0.800151 | 1.648542e-48 | -8.615850e-47 |
| Msa0274290 | Msa0461720 | 0.811253 | 7.679657e-51 | -8.615850e-47 |
| Msa0274290 | Msa0475790 | 0.800835 | 1.196130e-48 | -8.615850e-47 |
| Msa0274290 | Msa0487630 | 0.821713 | 3.488061e-53 | -8.615850e-47 |
| Msa0274290 | Msa0489100 | 0.813029 | 3.147802e-51 | -8.615850e-47 |
| Msa0274290 | Msa0503590 | 0.807492 | 4.921864e-50 | -8.615850e-47 |
| Msa0274290 | Msa0518520 | 0.802961 | 4.374741e-49 | -8.615850e-47 |
| Msa0274290 | Msa0535060 | 0.802841 | 4.631607e-49 | -8.615850e-47 |
| Msa0274290 | Msa0537920 | 0.800421 | 1.452587e-48 | -8.615850e-47 |
| Msa0274290 | Msa0574890 | 0.846509 | 2.077461e-59 | -8.615850e-47 |
| Msa0274290 | Msa0591770 | 0.801569 | 8.462685e-49 | -8.615850e-47 |
| Msa0274290 | Msa0601530 | 0.805581 | 1.245965e-49 | -8.615850e-47 |
| Msa0274290 | Msa0669850 | 0.805182 | 1.510655e-49 | -8.615850e-47 |
| Msa0274290 | Msa0702350 | 0.801061 | 1.075379e-48 | -8.615850e-47 |
| Msa0274290 | Msa0720040 | 0.818122 | 2.311720e-52 | -8.615850e-47 |
| Msa0274290 | Msa0743720 | 0.811169 | 8.009764e-51 | -8.615850e-47 |
| Msa0274290 | Msa0777570 | -0.827469 | 1.538173e-54 | -8.615850e-47 |
| Msa0274290 | Msa0824680 | 0.816433 | 5.543315e-52 | -8.615850e-47 |
| Msa0274290 | Msa0849100 | 0.817906 | 2.585818e-52 | -8.615850e-47 |
| Msa0274290 | Msa0863870 | 0.818705 | 1.705129e-52 | -8.615850e-47 |
| Msa0274290 | Msa0872310 | 0.812331 | 4.473310e-51 | -8.615850e-47 |
| Msa0274290 | Msa0880140 | 0.839320 | 1.699880e-57 | -8.615850e-47 |
| Msa0274290 | Msa0896210 | 0.800299 | 1.537915e-48 | -8.615850e-47 |
| Msa0274290 | Msa0896220 | 0.837252 | 5.799348e-57 | -8.615850e-47 |
| Msa0274290 | Msa0896970 | 0.825453 | 4.648319e-54 | -8.615850e-47 |
| Msa0274290 | Msa0908050 | 0.822143 | 2.773673e-53 | -8.615850e-47 |
| Msa0274290 | Msa0930780 | 0.826173 | 3.137628e-54 | -8.615850e-47 |
| Msa0274290 | Msa0936340 | 0.826811 | 2.210209e-54 | -8.615850e-47 |
| Msa0274290 | Msa0979550 | 0.809476 | 1.857232e-50 | -8.615850e-47 |
| Msa0274290 | Msa0996080 | 0.819903 | 9.095097e-53 | -8.615850e-47 |
| Msa0274290 | Msa0996960 | 0.815082 | 1.109239e-51 | -8.615850e-47 |
| Msa0274290 | Msa1007610 | -0.825104 | 5.623338e-54 | -8.615850e-47 |
| Msa0274290 | Msa1008060 | -0.800914 | 1.152531e-48 | -8.615850e-47 |
| Msa0274290 | Msa1014270 | 0.818665 | 1.741037e-52 | -8.615850e-47 |
| Msa0274290 | Msa1026760 | 0.802832 | 4.652670e-49 | -8.615850e-47 |
| Msa0274290 | Msa1037700 | -0.804939 | 1.697733e-49 | -8.615850e-47 |
| Msa0274290 | Msa1040400 | 0.801799 | 7.591831e-49 | -8.615850e-47 |
| Msa0274290 | Msa1044340 | 0.801993 | 6.926590e-49 | -8.615850e-47 |
| Msa0274290 | Msa1054240 | 0.802918 | 4.467019e-49 | -8.615850e-47 |
| Msa0274290 | Msa1055280 | 0.805093 | 1.576821e-49 | -8.615850e-47 |
| Msa0274290 | Msa1075220 | -0.810417 | 1.164932e-50 | -8.615850e-47 |
| Msa0274290 | Msa1123880 | 0.810791 | 9.667822e-51 | -8.615850e-47 |
| Msa0274290 | Msa1125000 | 0.810854 | 9.371843e-51 | -8.615850e-47 |
| Msa0274290 | Msa1127950 | 0.810370 | 1.192096e-50 | -8.615850e-47 |
| Msa0274290 | Msa1130270 | -0.804443 | 2.155151e-49 | -8.615850e-47 |
| Msa0274290 | Msa1154030 | 0.820753 | 5.807713e-53 | -8.615850e-47 |
| Msa0274290 | Msa1162550 | -0.805427 | 1.342225e-49 | -8.615850e-47 |
| Msa0274290 | Msa1169710 | 0.807502 | 4.898315e-50 | -8.615850e-47 |
| Msa0274290 | Msa1179460 | 0.803607 | 3.216509e-49 | -8.615850e-47 |
| Msa0274290 | Msa1211090 | 0.813997 | 1.928168e-51 | -8.615850e-47 |
| Msa0274290 | Msa1218280 | -0.820939 | 5.262359e-53 | -8.615850e-47 |
| Msa0274290 | Msa1222970 | 0.810932 | 9.011641e-51 | -8.615850e-47 |
| Msa0274290 | Msa1228210 | 0.800801 | 1.215617e-48 | -8.615850e-47 |
| Msa0274290 | Msa1237030 | 0.807811 | 4.212278e-50 | -8.615850e-47 |
| Msa0274290 | Msa1264020 | 0.806799 | 6.903558e-50 | -8.615850e-47 |
| Msa0274290 | Msa1267220 | 0.815255 | 1.015405e-51 | -8.615850e-47 |
| Msa0274290 | Msa1269580 | -0.811361 | 7.275251e-51 | -8.615850e-47 |
| Msa0274290 | Msa1277280 | 0.808777 | 2.622007e-50 | -8.615850e-47 |
| Msa0274290 | Msa1303240 | 0.800926 | 1.145883e-48 | -8.615850e-47 |
| Msa0274290 | Msa1303250 | 0.828551 | 8.441443e-55 | -8.615850e-47 |
| Msa0274290 | Msa1318120 | 0.804439 | 2.159094e-49 | -8.615850e-47 |
| Msa0274290 | Msa1320740 | 0.809967 | 1.456056e-50 | -8.615850e-47 |
| Msa0274290 | Msa1322860 | 0.806852 | 6.725513e-50 | -8.615850e-47 |
| Msa0274290 | Msa1327050 | 0.803816 | 2.909827e-49 | -8.615850e-47 |
| Msa0274290 | Msa1351760 | 0.820609 | 6.266114e-53 | -8.615850e-47 |
| Msa0274290 | Msa1362510 | 0.802946 | 4.406037e-49 | -8.615850e-47 |
| Msa0274290 | Msa1367080 | 0.801185 | 1.014540e-48 | -8.615850e-47 |
| Msa0274290 | Msa1374550 | 0.844872 | 5.777626e-59 | -8.615850e-47 |
| Msa0274290 | Msa1382720 | 0.809830 | 1.558413e-50 | -8.615850e-47 |
| Msa0274290 | Msa1385620 | 0.801472 | 8.859954e-49 | -8.615850e-47 |
| Msa0274290 | Msa1390310 | 0.801660 | 8.107029e-49 | -8.615850e-47 |
| Msa0274290 | Msa1411700 | 0.816282 | 5.992779e-52 | -8.615850e-47 |
| Msa0274290 | Msa1429360 | -0.820587 | 6.338949e-53 | -8.615850e-47 |
| Msa0274290 | Msa1461300 | 0.808027 | 3.788961e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274290 | MtrunA17_Chr2g0284581 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 546 |
| Msa0274290 | MtrunA17_Chr2g0284591 | 81.818 | 264 | 48 | 0 | 7 | 270 | 5 | 268 | 1.11e-164 | 457 |
| Msa0274290 | MtrunA17_Chr2g0284601 | 98.182 | 220 | 4 | 0 | 54 | 273 | 6 | 225 | 1.24e-157 | 437 |
| Msa0274290 | MtrunA17_Chr2g0284611 | 78.947 | 266 | 56 | 0 | 1 | 266 | 1 | 266 | 5.41e-156 | 435 |
| Msa0274290 | MtrunA17_Chr8g0379911 | 77.239 | 268 | 61 | 0 | 1 | 268 | 1 | 268 | 2.29e-154 | 431 |
| Msa0274290 | MtrunA17_Chr8g0379901 | 70.849 | 271 | 79 | 0 | 3 | 273 | 4 | 274 | 5.55e-143 | 402 |
| Msa0274290 | MtrunA17_Chr2g0284631 | 69.853 | 272 | 75 | 2 | 1 | 265 | 53 | 324 | 9.95e-141 | 399 |
| Msa0274290 | MtrunA17_Chr4g0044201 | 56.379 | 243 | 91 | 2 | 32 | 272 | 29 | 258 | 3.33e-95 | 280 |
| Msa0274290 | MtrunA17_Chr5g0435051 | 53.138 | 239 | 103 | 3 | 18 | 253 | 22 | 254 | 4.75e-85 | 255 |
| Msa0274290 | MtrunA17_Chr3g0079421 | 53.975 | 239 | 107 | 2 | 18 | 256 | 8 | 243 | 1.61e-84 | 253 |
| Msa0274290 | MtrunA17_Chr4g0001221 | 49.801 | 251 | 117 | 3 | 21 | 265 | 58 | 305 | 2.97e-71 | 221 |
| Msa0274290 | MtrunA17_Chr7g0217331 | 47.534 | 223 | 114 | 2 | 31 | 251 | 28 | 249 | 1.74e-69 | 216 |
| Msa0274290 | MtrunA17_Chr2g0333771 | 51.628 | 215 | 99 | 2 | 36 | 248 | 78 | 289 | 2.97e-68 | 214 |
| Msa0274290 | MtrunA17_Chr5g0426131 | 47.328 | 262 | 115 | 7 | 15 | 260 | 5 | 259 | 7.35e-68 | 211 |
| Msa0274290 | MtrunA17_Chr1g0201331 | 47.200 | 250 | 113 | 4 | 26 | 259 | 54 | 300 | 6.27e-67 | 210 |
| Msa0274290 | MtrunA17_Chr1g0184541 | 39.070 | 215 | 130 | 1 | 38 | 252 | 62 | 275 | 3.75e-47 | 159 |
| Msa0274290 | MtrunA17_Chr4g0001111 | 50.667 | 150 | 69 | 2 | 34 | 181 | 71 | 217 | 8.32e-37 | 130 |
| Msa0274290 | MtrunA17_Chr4g0001161 | 47.518 | 141 | 69 | 2 | 51 | 189 | 1 | 138 | 1.27e-29 | 109 |
| Msa0274290 | MtrunA17_Chr4g0001121 | 50.538 | 93 | 42 | 1 | 177 | 265 | 6 | 98 | 6.86e-26 | 97.8 |
| Msa0274290 | MtrunA17_Chr8g0340161 | 32.367 | 207 | 133 | 3 | 37 | 236 | 18 | 224 | 2.77e-25 | 100 |
| Msa0274290 | MtrunA17_Chr1g0188771 | 31.950 | 241 | 146 | 6 | 24 | 253 | 10 | 243 | 9.18e-25 | 99.8 |
| Msa0274290 | MtrunA17_Chr2g0331261 | 30.645 | 248 | 160 | 6 | 18 | 256 | 3 | 247 | 1.63e-23 | 95.9 |
| Msa0274290 | MtrunA17_Chr6g0478191 | 29.630 | 243 | 155 | 6 | 21 | 253 | 7 | 243 | 1.76e-22 | 93.2 |
| Msa0274290 | MtrunA17_Chr1g0146161 | 32.143 | 224 | 136 | 7 | 19 | 236 | 7 | 220 | 2.13e-22 | 92.8 |
| Msa0274290 | MtrunA17_Chr5g0399341 | 33.478 | 230 | 142 | 7 | 37 | 256 | 18 | 246 | 2.99e-22 | 92.4 |
| Msa0274290 | MtrunA17_Chr1g0146171 | 32.000 | 250 | 150 | 9 | 19 | 258 | 7 | 246 | 1.04e-21 | 91.3 |
| Msa0274290 | MtrunA17_Chr4g0001151 | 42.857 | 133 | 56 | 3 | 51 | 181 | 1 | 115 | 8.05e-20 | 87.4 |
| Msa0274290 | MtrunA17_Chr4g0030861 | 32.159 | 227 | 140 | 7 | 43 | 256 | 26 | 251 | 9.30e-18 | 80.5 |
| Msa0274290 | MtrunA17_Chr7g0264961 | 30.667 | 225 | 146 | 6 | 37 | 252 | 20 | 243 | 1.62e-17 | 79.7 |
| Msa0274290 | MtrunA17_Chr3g0145671 | 28.384 | 229 | 141 | 5 | 38 | 247 | 37 | 261 | 8.91e-17 | 78.2 |
| Msa0274290 | MtrunA17_Chr2g0326621 | 30.899 | 178 | 111 | 3 | 72 | 237 | 84 | 261 | 1.04e-16 | 78.2 |
| Msa0274290 | MtrunA17_Chr5g0436701 | 31.019 | 216 | 127 | 7 | 41 | 237 | 58 | 270 | 2.03e-16 | 77.4 |
| Msa0274290 | MtrunA17_Chr5g0397391 | 30.047 | 213 | 133 | 5 | 41 | 237 | 55 | 267 | 5.87e-16 | 75.9 |
| Msa0274290 | MtrunA17_Chr1g0212671 | 32.227 | 211 | 130 | 5 | 37 | 237 | 20 | 227 | 6.31e-16 | 75.5 |
| Msa0274290 | MtrunA17_Chr8g0386961 | 30.047 | 213 | 133 | 5 | 41 | 237 | 55 | 267 | 6.61e-16 | 75.9 |
| Msa0274290 | MtrunA17_Chr7g0264111 | 29.412 | 221 | 135 | 6 | 38 | 237 | 39 | 259 | 6.87e-16 | 75.9 |
| Msa0274290 | MtrunA17_Chr3g0113211 | 28.638 | 213 | 136 | 5 | 41 | 237 | 58 | 270 | 5.90e-15 | 73.2 |
| Msa0274290 | MtrunA17_Chr4g0006001 | 29.245 | 212 | 135 | 5 | 41 | 237 | 59 | 270 | 9.24e-15 | 72.8 |
| Msa0274290 | MtrunA17_Chr1g0199731 | 28.796 | 191 | 118 | 4 | 72 | 247 | 82 | 269 | 1.27e-14 | 72.4 |
| Msa0274290 | MtrunA17_Chr7g0222791 | 28.740 | 254 | 147 | 9 | 11 | 251 | 4 | 236 | 3.74e-13 | 67.8 |
| Msa0274290 | MtrunA17_Chr4g0020781 | 27.604 | 192 | 129 | 3 | 84 | 273 | 30 | 213 | 1.95e-12 | 65.1 |
| Msa0274290 | MtrunA17_Chr4g0029071 | 29.282 | 181 | 110 | 5 | 72 | 237 | 82 | 259 | 3.28e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274290 | AT4G18910.1 | 71.206 | 257 | 67 | 1 | 24 | 273 | 38 | 294 | 3.94e-132 | 376 |
| Msa0274290 | AT4G19030.1 | 68.898 | 254 | 72 | 1 | 24 | 270 | 41 | 294 | 3.71e-126 | 361 |
| Msa0274290 | AT5G37820.1 | 58.824 | 255 | 102 | 1 | 18 | 269 | 20 | 274 | 2.31e-100 | 295 |
| Msa0274290 | AT5G37820.2 | 58.824 | 255 | 102 | 1 | 18 | 269 | 56 | 310 | 8.27e-100 | 295 |
| Msa0274290 | AT5G37810.1 | 54.380 | 274 | 118 | 3 | 1 | 268 | 1 | 273 | 5.66e-99 | 291 |
| Msa0274290 | AT4G18910.2 | 75.135 | 185 | 39 | 1 | 24 | 201 | 38 | 222 | 2.15e-92 | 272 |
| Msa0274290 | AT2G34390.1 | 52.098 | 286 | 119 | 3 | 1 | 269 | 1 | 285 | 4.50e-91 | 271 |
| Msa0274290 | AT1G31885.1 | 53.441 | 247 | 108 | 1 | 20 | 259 | 25 | 271 | 9.27e-91 | 272 |
| Msa0274290 | AT4G19030.3 | 70.109 | 184 | 48 | 1 | 24 | 200 | 41 | 224 | 5.73e-88 | 261 |
| Msa0274290 | AT2G34390.2 | 55.882 | 238 | 97 | 2 | 39 | 269 | 7 | 243 | 1.01e-86 | 259 |
| Msa0274290 | AT1G31885.2 | 55.300 | 217 | 90 | 1 | 50 | 259 | 1 | 217 | 4.00e-84 | 253 |
| Msa0274290 | AT4G19030.2 | 67.879 | 165 | 46 | 1 | 24 | 181 | 41 | 205 | 7.85e-76 | 230 |
| Msa0274290 | AT2G34390.3 | 54.128 | 218 | 82 | 3 | 1 | 201 | 1 | 217 | 8.78e-69 | 212 |
| Msa0274290 | AT4G10380.1 | 48.163 | 245 | 112 | 4 | 27 | 259 | 63 | 304 | 2.62e-68 | 214 |
| Msa0274290 | AT1G80760.1 | 52.489 | 221 | 100 | 2 | 34 | 252 | 76 | 293 | 3.01e-68 | 214 |
| Msa0274290 | AT2G34390.4 | 52.500 | 200 | 77 | 3 | 1 | 183 | 1 | 199 | 9.87e-60 | 189 |
| Msa0274290 | AT3G06100.1 | 39.908 | 218 | 129 | 2 | 37 | 253 | 45 | 261 | 6.09e-44 | 150 |
| Msa0274290 | AT3G06100.2 | 40.187 | 214 | 126 | 2 | 41 | 253 | 1 | 213 | 1.55e-43 | 148 |
| Msa0274290 | AT1G31885.3 | 56.842 | 95 | 41 | 0 | 20 | 114 | 25 | 119 | 2.80e-31 | 113 |
| Msa0274290 | AT2G29870.1 | 49.573 | 117 | 59 | 0 | 153 | 269 | 20 | 136 | 3.07e-31 | 113 |
| Msa0274290 | AT3G16240.1 | 34.300 | 207 | 129 | 3 | 37 | 236 | 18 | 224 | 9.91e-28 | 107 |
| Msa0274290 | AT5G47450.1 | 34.199 | 231 | 142 | 6 | 37 | 257 | 18 | 248 | 1.58e-26 | 104 |
| Msa0274290 | AT4G17340.1 | 33.043 | 230 | 144 | 6 | 37 | 256 | 18 | 247 | 2.16e-24 | 98.6 |
| Msa0274290 | AT3G06100.3 | 39.007 | 141 | 84 | 2 | 114 | 253 | 41 | 180 | 2.66e-24 | 97.1 |
| Msa0274290 | AT1G17810.1 | 32.794 | 247 | 143 | 7 | 24 | 253 | 13 | 253 | 5.48e-24 | 98.2 |
| Msa0274290 | AT1G73190.1 | 30.556 | 252 | 140 | 7 | 24 | 253 | 13 | 251 | 1.55e-22 | 94.4 |
| Msa0274290 | AT2G25810.1 | 30.837 | 227 | 137 | 7 | 19 | 237 | 7 | 221 | 2.31e-19 | 85.1 |
| Msa0274290 | AT3G26520.1 | 32.381 | 210 | 129 | 5 | 37 | 236 | 21 | 227 | 1.22e-18 | 83.2 |
| Msa0274290 | AT2G36830.1 | 32.018 | 228 | 138 | 7 | 24 | 240 | 10 | 231 | 6.37e-18 | 81.3 |
| Msa0274290 | AT4G35100.1 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 8.99e-18 | 81.3 |
| Msa0274290 | AT4G35100.2 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 8.99e-18 | 81.3 |
| Msa0274290 | AT5G60660.1 | 28.270 | 237 | 143 | 6 | 35 | 247 | 36 | 269 | 1.41e-17 | 80.9 |
| Msa0274290 | AT2G16850.1 | 28.017 | 232 | 138 | 6 | 38 | 247 | 36 | 260 | 2.53e-16 | 77.4 |
| Msa0274290 | AT2G39010.1 | 31.217 | 189 | 116 | 5 | 72 | 247 | 81 | 268 | 5.37e-16 | 76.6 |
| Msa0274290 | AT4G01470.1 | 30.288 | 208 | 138 | 3 | 37 | 237 | 20 | 227 | 6.21e-16 | 75.9 |
| Msa0274290 | AT3G53420.1 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 9.30e-16 | 75.9 |
| Msa0274290 | AT3G53420.2 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 9.30e-16 | 75.9 |
| Msa0274290 | AT3G54820.1 | 26.923 | 234 | 144 | 5 | 38 | 247 | 38 | 268 | 6.88e-15 | 73.6 |
| Msa0274290 | AT1G01620.2 | 31.492 | 181 | 106 | 4 | 72 | 237 | 17 | 194 | 7.07e-15 | 72.0 |
| Msa0274290 | AT1G01620.1 | 31.492 | 181 | 106 | 4 | 72 | 237 | 89 | 266 | 1.24e-14 | 72.8 |
| Msa0274290 | AT2G37170.1 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 2.14e-14 | 72.0 |
| Msa0274290 | AT3G61430.2 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 2.45e-14 | 72.0 |
| Msa0274290 | AT3G61430.1 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 2.45e-14 | 72.0 |
| Msa0274290 | AT4G00430.1 | 31.492 | 181 | 106 | 4 | 72 | 237 | 90 | 267 | 3.25e-14 | 71.6 |
| Msa0274290 | AT2G37170.2 | 28.272 | 191 | 119 | 4 | 72 | 247 | 123 | 310 | 3.69e-14 | 71.6 |
| Msa0274290 | AT2G37180.1 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 3.99e-14 | 71.2 |
| Msa0274290 | AT2G45960.1 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 6.55e-14 | 70.5 |
| Msa0274290 | AT4G23400.1 | 30.939 | 181 | 107 | 4 | 72 | 237 | 90 | 267 | 1.12e-13 | 70.1 |
| Msa0274290 | AT3G47440.1 | 29.167 | 216 | 143 | 5 | 37 | 244 | 22 | 235 | 2.18e-13 | 68.6 |
| Msa0274290 | AT2G45960.3 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.13e-13 | 67.8 |
| Msa0274290 | AT2G45960.2 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.76e-13 | 67.4 |
Find 94 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCTGTTGGTCACATTTC+TGG | 0.071303 | 2_3:-6118848 | Msa0274290:CDS |
| TATCTTATGTTCGTCATTTC+TGG | 0.082482 | 2_3:-6118013 | Msa0274290:CDS |
| GAGAGACCTGCCCCAATTTA+TGG | 0.173339 | 2_3:+6119567 | None:intergenic |
| AAGAGTGCCTCTTTCCTTAA+AGG | 0.183929 | 2_3:-6116926 | Msa0274290:CDS |
| TCCTGGGATTTCAATTGTTT+GGG | 0.185357 | 2_3:-6118894 | Msa0274290:CDS |
| TTCGCATATGGAAAATAAAT+TGG | 0.195186 | 2_3:+6119668 | None:intergenic |
| TTCATTGATGCTCCAGTAAT+TGG | 0.244218 | 2_3:+6117097 | None:intergenic |
| TGCATGACTCATCACACTTT+TGG | 0.246215 | 2_3:+6119395 | None:intergenic |
| ATCCTGGGATTTCAATTGTT+TGG | 0.255375 | 2_3:-6118895 | Msa0274290:CDS |
| CTTATTCTTTGTCGGTGATA+TGG | 0.259310 | 2_3:-6119479 | Msa0274290:exon |
| GGGTCTCACTGTTATGGTTT+TGG | 0.266153 | 2_3:-6118873 | Msa0274290:CDS |
| TGCATCCACCAAAAGGTTTC+CGG | 0.271933 | 2_3:-6118792 | Msa0274290:CDS |
| TTCCTTAAAGGAGTAGAAAA+TGG | 0.281136 | 2_3:-6116914 | Msa0274290:CDS |
| ACGTACTTCTTGATATTTGC+AGG | 0.286199 | 2_3:-6118965 | Msa0274290:CDS |
| TTTGTTAACAGGCCAATTAC+TGG | 0.289918 | 2_3:-6117109 | Msa0274290:intron |
| CTGCTTAACCGGAAACCTTT+TGG | 0.301395 | 2_3:+6118784 | None:intergenic |
| TGTTTGGGGTCTCACTGTTA+TGG | 0.308145 | 2_3:-6118879 | Msa0274290:CDS |
| TATATAATATCTCAAGTTCT+TGG | 0.312865 | 2_3:-6118157 | Msa0274290:CDS |
| CATATCACCGACAAAGAATA+AGG | 0.326631 | 2_3:+6119480 | None:intergenic |
| CTTCTAAATGTTATGTTTGC+CGG | 0.328211 | 2_3:-6117480 | Msa0274290:CDS |
| TAGAGGAATATGGATATATT+TGG | 0.328926 | 2_3:-6117032 | Msa0274290:CDS |
| GCAGGTCCTAAGCTCCTTGC+AGG | 0.331255 | 2_3:+6117073 | None:intergenic |
| AGAGACCTGCCCCAATTTAT+GGG | 0.358856 | 2_3:+6119568 | None:intergenic |
| GCATCATCCTTATTCTTTGT+CGG | 0.365447 | 2_3:-6119487 | Msa0274290:five_prime_UTR |
| TATCTCTAGTTAATTTAGAT+TGG | 0.367884 | 2_3:-6116786 | Msa0274290:three_prime_UTR |
| ACTCGGATCACCTGCTTAAC+CGG | 0.396444 | 2_3:+6118773 | None:intergenic |
| TCCTGCTGGTTCTGATCTCC+AGG | 0.406259 | 2_3:-6118065 | Msa0274290:CDS |
| TTCTGATCTCCAGGCATTTG+TGG | 0.415818 | 2_3:-6118056 | Msa0274290:CDS |
| ATAAAGAGTATAGAGGAATA+TGG | 0.423309 | 2_3:-6117042 | Msa0274290:CDS |
| ATGTAATTTACTTTATGTTA+CGG | 0.424850 | 2_3:-6116701 | Msa0274290:three_prime_UTR |
| TTCTACTCCTTTAAGGAAAG+AGG | 0.436744 | 2_3:+6116919 | None:intergenic |
| ATGAACCCTGCAAGGAGCTT+AGG | 0.445185 | 2_3:-6117079 | Msa0274290:CDS |
| AGTAGATCCAACTGCAAGTC+CGG | 0.451623 | 2_3:+6117506 | None:intergenic |
| ACACTTAGGCTTATATTCAA+TGG | 0.454254 | 2_3:-6118115 | Msa0274290:CDS |
| GACAAAGTGGTAACACATCC+TGG | 0.456746 | 2_3:-6118911 | Msa0274290:CDS |
| CAAAAGGTTTCCGGTTAAGC+AGG | 0.462415 | 2_3:-6118783 | Msa0274290:intron |
| TAAGTGAGTTAGATTTATCA+AGG | 0.466276 | 2_3:-6116885 | Msa0274290:exon |
| CTCTTACTAATTTCACGCAC+TGG | 0.467398 | 2_3:+6116944 | None:intergenic |
| TTACATTCAAAACCATTTCG+TGG | 0.488661 | 2_3:+6119431 | None:intergenic |
| GCAAAAGAGGCACATAGTCT+TGG | 0.488743 | 2_3:+6119371 | None:intergenic |
| AGTCTTATAAAGAGGAAGGA+TGG | 0.488962 | 2_3:+6119599 | None:intergenic |
| ACAACTCTTGGTGCCATAGC+TGG | 0.490463 | 2_3:-6117004 | Msa0274290:CDS |
| AAGCAATGGAAACCACGAAA+TGG | 0.491267 | 2_3:-6119443 | Msa0274290:CDS |
| TTGGTGCCATAGCTGGTACA+TGG | 0.491349 | 2_3:-6116997 | Msa0274290:CDS |
| ATACACACCTTCTGCAAAAG+AGG | 0.497346 | 2_3:+6119358 | None:intergenic |
| TTCTAAATGTTATGTTTGCC+GGG | 0.499731 | 2_3:-6117479 | Msa0274290:intron |
| TATTTGGTATCAACAACTCT+TGG | 0.500417 | 2_3:-6117016 | Msa0274290:CDS |
| TGCAGGGTGTGCTGCTGTTG+TGG | 0.511373 | 2_3:-6118948 | Msa0274290:CDS |
| TACTCTTTATGAACAATAGC+AGG | 0.512534 | 2_3:+6117055 | None:intergenic |
| TTGCTCATGCATCCACCAAA+AGG | 0.514247 | 2_3:-6118799 | Msa0274290:CDS |
| TATAAAGAGGAAGGATGGGA+TGG | 0.516676 | 2_3:+6119604 | None:intergenic |
| CCTGGGATTTCAATTGTTTG+GGG | 0.520676 | 2_3:-6118893 | Msa0274290:CDS |
| TGAATTCAACCACAAATGCC+TGG | 0.521494 | 2_3:+6118047 | None:intergenic |
| GTCTTATAAAGAGGAAGGAT+GGG | 0.525684 | 2_3:+6119600 | None:intergenic |
| GAGTGCCCATAAATTGGGGC+AGG | 0.526299 | 2_3:-6119573 | Msa0274290:five_prime_UTR |
| TTACCACTTTGTCATTGTCA+AGG | 0.527510 | 2_3:+6118921 | None:intergenic |
| GGAGATTACCGCTCTATTGT+CGG | 0.528942 | 2_3:+6117982 | None:intergenic |
| GTAGTTGGTAGCAGAGGTTG+TGG | 0.535028 | 2_3:-6118990 | Msa0274290:intron |
| CACTCAAAAGTCTTATAAAG+AGG | 0.535047 | 2_3:+6119591 | None:intergenic |
| TGGTGCCATAGCTGGTACAT+GGG | 0.538881 | 2_3:-6116996 | Msa0274290:CDS |
| TCGCAGATTGGTGAGTTGGC+CGG | 0.540241 | 2_3:-6117525 | Msa0274290:intron |
| ATAAAGAGGAAGGATGGGAT+GGG | 0.542417 | 2_3:+6119605 | None:intergenic |
| CAAAAGTCTTATAAAGAGGA+AGG | 0.550367 | 2_3:+6119595 | None:intergenic |
| CCCCAAACAATTGAAATCCC+AGG | 0.550515 | 2_3:+6118893 | None:intergenic |
| TATGTTCGTCATTTCTGGAG+TGG | 0.553193 | 2_3:-6118008 | Msa0274290:CDS |
| GCATGAGCAATGGTGACAGC+AGG | 0.555499 | 2_3:+6118812 | None:intergenic |
| TAGTTGGTAGCAGAGGTTGT+GGG | 0.558311 | 2_3:-6118989 | Msa0274290:CDS |
| AATATCGCAGATTGGTGAGT+TGG | 0.558536 | 2_3:-6117529 | Msa0274290:intron |
| GCACTGGCTTGTTTGTGTAC+CGG | 0.558893 | 2_3:+6116960 | None:intergenic |
| TAGGCTTATATTCAATGGCA+AGG | 0.559061 | 2_3:-6118110 | Msa0274290:CDS |
| ATATACATAACTAGAGGAAA+CGG | 0.565529 | 2_3:-6116749 | Msa0274290:three_prime_UTR |
| CATGGGCATATACTTTCATC+CGG | 0.565944 | 2_3:-6116979 | Msa0274290:CDS |
| CTTGGATCAACTCTTGCAAG+TGG | 0.567738 | 2_3:-6118139 | Msa0274290:CDS |
| CTTAAAGGAGTAGAAAATGG+TGG | 0.573302 | 2_3:-6116911 | Msa0274290:CDS |
| CGTACTTCTTGATATTTGCA+GGG | 0.575700 | 2_3:-6118964 | Msa0274290:CDS |
| GCCTGGAGATCAGAACCAGC+AGG | 0.579301 | 2_3:+6118064 | None:intergenic |
| ATATGCCCATGTACCAGCTA+TGG | 0.580208 | 2_3:+6116991 | None:intergenic |
| ACTTGAGATATTATATAAGC+CGG | 0.584944 | 2_3:+6118163 | None:intergenic |
| ATTGTTCATAAAGAGTATAG+AGG | 0.595518 | 2_3:-6117049 | Msa0274290:CDS |
| GAGTTGGCCGGACTTGCAGT+TGG | 0.596194 | 2_3:-6117513 | Msa0274290:CDS |
| GCTGATCATTCATCAAGCAA+TGG | 0.606516 | 2_3:-6119457 | Msa0274290:CDS |
| ACAAAGTGGTAACACATCCT+GGG | 0.613941 | 2_3:-6118910 | Msa0274290:CDS |
| GAGCATCAATGAACCCTGCA+AGG | 0.617643 | 2_3:-6117087 | Msa0274290:CDS |
| CAGGTCCTAAGCTCCTTGCA+GGG | 0.629880 | 2_3:+6117074 | None:intergenic |
| GTAACATAAAGTAAATTACA+TGG | 0.638499 | 2_3:+6116703 | None:intergenic |
| CTCTTGCAAGTGGAACACTT+AGG | 0.640873 | 2_3:-6118129 | Msa0274290:CDS |
| TATGTAATATACATAACTAG+AGG | 0.643201 | 2_3:-6116755 | Msa0274290:three_prime_UTR |
| TTGAATGTAGTTGGTAGCAG+AGG | 0.649135 | 2_3:-6118996 | Msa0274290:intron |
| AGTTGGTAGCAGAGGTTGTG+GGG | 0.653045 | 2_3:-6118988 | Msa0274290:CDS |
| TTTGGTGGATGCATGAGCAA+TGG | 0.663155 | 2_3:+6118802 | None:intergenic |
| GATTACCGCTCTATTGTCGG+TGG | 0.674328 | 2_3:+6117985 | None:intergenic |
| GATTTATCAAGGATTGCACG+AGG | 0.684895 | 2_3:-6116874 | Msa0274290:three_prime_UTR |
| GAACCTTGACAATGACAAAG+TGG | 0.704582 | 2_3:-6118924 | Msa0274290:CDS |
| AGTGGCCACCGACAATAGAG+CGG | 0.719424 | 2_3:-6117990 | Msa0274290:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAGTATATGAAAT+TGG | + | chr2_3:6117154-6117173 | None:intergenic | 10.0% |
| !!! | TTATTCAATAATTTTTTAGA+TGG | - | chr2_3:6117731-6117750 | Msa0274290:intron | 10.0% |
| !!! | AACAAATTTTTTATTTTCAA+CGG | + | chr2_3:6118411-6118430 | None:intergenic | 10.0% |
| !!! | TTTATTTTTCTTTTGAAAAT+TGG | - | chr2_3:6118654-6118673 | Msa0274290:intron | 10.0% |
| !!! | TTATTTTTCTTTTGAAAATT+GGG | - | chr2_3:6118655-6118674 | Msa0274290:intron | 10.0% |
| !! | ATATTGACAAAAAAAATAAA+AGG | + | chr2_3:6118761-6118780 | None:intergenic | 10.0% |
| !!! | GAATTTAATCTCTAAAATAT+CGG | - | chr2_3:6117021-6117040 | Msa0274290:CDS | 15.0% |
| !!! | ATCTTTGTTATTAAAGTATT+AGG | + | chr2_3:6117123-6117142 | None:intergenic | 15.0% |
| !! | TAAAGAGTAAAATACTTTAA+AGG | - | chr2_3:6117207-6117226 | Msa0274290:intron | 15.0% |
| !!! | TACTTTAAAGGTTAAATTAA+CGG | - | chr2_3:6117219-6117238 | Msa0274290:intron | 15.0% |
| !! | GAGTATTTGTTTATATATAA+GGG | + | chr2_3:6118353-6118372 | None:intergenic | 15.0% |
| !!! | AGAGTATTTGTTTATATATA+AGG | + | chr2_3:6118354-6118373 | None:intergenic | 15.0% |
| !! | ATGTAATTTACTTTATGTTA+CGG | - | chr2_3:6119604-6119623 | Msa0274290:five_prime_UTR | 15.0% |
| !!! | TTGAAAATAATTTTCGCATA+TGG | + | chr2_3:6116652-6116671 | None:intergenic | 20.0% |
| !!! | CTGATATGTGATTTTAAATA+TGG | - | chr2_3:6117248-6117267 | Msa0274290:intron | 20.0% |
| !!! | GAATATAGTTTTAAAGAACT+CGG | + | chr2_3:6117552-6117571 | None:intergenic | 20.0% |
| !! | AATGTATCTGATTCAAAATT+TGG | - | chr2_3:6117615-6117634 | Msa0274290:intron | 20.0% |
| !! | AAGAAAATATGATTGCTTTA+AGG | + | chr2_3:6117818-6117837 | None:intergenic | 20.0% |
| !! | CCATATTATGAATTCAAAAA+CGG | + | chr2_3:6117985-6118004 | None:intergenic | 20.0% |
| !! | TTTGGATAATATGCAAAAAA+TGG | + | chr2_3:6118050-6118069 | None:intergenic | 20.0% |
| !! | GTACAATTAAGTATACTATT+TGG | + | chr2_3:6118068-6118087 | None:intergenic | 20.0% |
| !! | TATATAATATCTCAAGTTCT+TGG | - | chr2_3:6118148-6118167 | Msa0274290:CDS | 20.0% |
| !! | ATAAACAAATACTCTTGTAT+TGG | - | chr2_3:6118359-6118378 | Msa0274290:intron | 20.0% |
| !! | ACATGTTAATGAATATAATG+TGG | - | chr2_3:6118625-6118644 | Msa0274290:intron | 20.0% |
| !! | TATCTCTAGTTAATTTAGAT+TGG | - | chr2_3:6119519-6119538 | Msa0274290:five_prime_UTR | 20.0% |
| !! | TATGTAATATACATAACTAG+AGG | - | chr2_3:6119550-6119569 | Msa0274290:five_prime_UTR | 20.0% |
| !! | GTAACATAAAGTAAATTACA+TGG | + | chr2_3:6119605-6119624 | None:intergenic | 20.0% |
| ! | TTCGCATATGGAAAATAAAT+TGG | + | chr2_3:6116640-6116659 | None:intergenic | 25.0% |
| !!! | GAAATGGTTTTGAATGTAAA+TGG | - | chr2_3:6116878-6116897 | Msa0274290:three_prime_UTR | 25.0% |
| !! | GAATCAGTGTTGAAATAAAA+TGG | - | chr2_3:6117270-6117289 | Msa0274290:intron | 25.0% |
| ! | TGTATTATGTTGAATGTAGT+TGG | - | chr2_3:6117300-6117319 | Msa0274290:intron | 25.0% |
| !!! | CAATAATTTTTTAGATGGTG+TGG | - | chr2_3:6117736-6117755 | Msa0274290:intron | 25.0% |
| ! | AAATGACATAATATAGAGCA+TGG | + | chr2_3:6117945-6117964 | None:intergenic | 25.0% |
| !!! | CCGTTTTTGAATTCATAATA+TGG | - | chr2_3:6117982-6118001 | Msa0274290:intron | 25.0% |
| ! | GCAAAAAATGGAAAAAGTTT+AGG | + | chr2_3:6118038-6118057 | None:intergenic | 25.0% |
| ! | ACTTGAGATATTATATAAGC+CGG | + | chr2_3:6118145-6118164 | None:intergenic | 25.0% |
| ! | TTGTTTATATATAAGGGCAA+AGG | + | chr2_3:6118347-6118366 | None:intergenic | 25.0% |
| !! | TTCATTAACATGTGTTTCTA+AGG | + | chr2_3:6118618-6118637 | None:intergenic | 25.0% |
| !! | TTGAGGTTTGATTTATAGTT+AGG | + | chr2_3:6118858-6118877 | None:intergenic | 25.0% |
| !!! | TTCTCAATATGTTTAGTTTG+AGG | + | chr2_3:6118875-6118894 | None:intergenic | 25.0% |
| ! | TCTAACATTTACTCTCTTAT+TGG | + | chr2_3:6119023-6119042 | None:intergenic | 25.0% |
| ! | TAATCTTATTGAAGAACTCT+CGG | + | chr2_3:6119108-6119127 | None:intergenic | 25.0% |
| !! | AATCCTATATGTTTGTTAAC+AGG | - | chr2_3:6119185-6119204 | Msa0274290:intron | 25.0% |
| !! | ATTGTTCATAAAGAGTATAG+AGG | - | chr2_3:6119256-6119275 | Msa0274290:intron | 25.0% |
| !! | ATAAAGAGTATAGAGGAATA+TGG | - | chr2_3:6119263-6119282 | Msa0274290:intron | 25.0% |
| ! | TAGAGGAATATGGATATATT+TGG | - | chr2_3:6119273-6119292 | Msa0274290:intron | 25.0% |
| ! | TAAGTGAGTTAGATTTATCA+AGG | - | chr2_3:6119420-6119439 | Msa0274290:CDS | 25.0% |
| ! | ATATACATAACTAGAGGAAA+CGG | - | chr2_3:6119556-6119575 | Msa0274290:five_prime_UTR | 25.0% |
| !!! | TCGATTTTTTCATCGAATTA+TGG | - | chr2_3:6119644-6119663 | Msa0274290:five_prime_UTR | 25.0% |
| !!! | CGATTTTTTCATCGAATTAT+GGG | - | chr2_3:6119645-6119664 | Msa0274290:five_prime_UTR | 25.0% |
| ! | CAAAAGTCTTATAAAGAGGA+AGG | + | chr2_3:6116713-6116732 | None:intergenic | 30.0% |
| ! | CACTCAAAAGTCTTATAAAG+AGG | + | chr2_3:6116717-6116736 | None:intergenic | 30.0% |
| TTACATTCAAAACCATTTCG+TGG | + | chr2_3:6116877-6116896 | None:intergenic | 30.0% | |
| CAAAAAAGTTCTATGTAGAG+TGG | + | chr2_3:6116981-6117000 | None:intergenic | 30.0% | |
| AATCCATATGCTTCAAAGTT+GGG | + | chr2_3:6117665-6117684 | None:intergenic | 30.0% | |
| TAATCCATATGCTTCAAAGT+TGG | + | chr2_3:6117666-6117685 | None:intergenic | 30.0% | |
| AAAACGGTTGCATACATATA+CGG | + | chr2_3:6117969-6117988 | None:intergenic | 30.0% | |
| GGAAGAGAAATTTCAATTGA+AGG | + | chr2_3:6118017-6118036 | None:intergenic | 30.0% | |
| TCTTCAATCTATAATCTTGC+AGG | - | chr2_3:6118117-6118136 | Msa0274290:CDS | 30.0% | |
| ACACTTAGGCTTATATTCAA+TGG | - | chr2_3:6118190-6118209 | Msa0274290:intron | 30.0% | |
| TATCTTATGTTCGTCATTTC+TGG | - | chr2_3:6118292-6118311 | Msa0274290:intron | 30.0% | |
| AATTGCAAATATGTCACAAG+TGG | - | chr2_3:6118500-6118519 | Msa0274290:intron | 30.0% | |
| ! | ACAATAGTGTTGAAGATTGA+TGG | + | chr2_3:6118556-6118575 | None:intergenic | 30.0% |
| ! | TTTTTGTCAATATCGCAGAT+TGG | - | chr2_3:6118768-6118787 | Msa0274290:intron | 30.0% |
| CTTCTAAATGTTATGTTTGC+CGG | - | chr2_3:6118825-6118844 | Msa0274290:CDS | 30.0% | |
| TTCTAAATGTTATGTTTGCC+GGG | - | chr2_3:6118826-6118845 | Msa0274290:CDS | 30.0% | |
| TTTATAGTTAGGTTCATACC+CGG | + | chr2_3:6118847-6118866 | None:intergenic | 30.0% | |
| TAACAATCACTCTCTTATTG+AGG | - | chr2_3:6118928-6118947 | Msa0274290:CDS | 30.0% | |
| AACAATCACTCTCTTATTGA+GGG | - | chr2_3:6118929-6118948 | Msa0274290:CDS | 30.0% | |
| TTATTGGATCAAACTCACAT+GGG | + | chr2_3:6119007-6119026 | None:intergenic | 30.0% | |
| TAAGAGAGTAAATGTTAGAG+AGG | - | chr2_3:6119024-6119043 | Msa0274290:intron | 30.0% | |
| TAGAGAGGACATTAGAAAAA+AGG | - | chr2_3:6119039-6119058 | Msa0274290:intron | 30.0% | |
| CATTCCTCAAATATAGTTAG+TGG | - | chr2_3:6119071-6119090 | Msa0274290:intron | 30.0% | |
| TACTCTTTATGAACAATAGC+AGG | + | chr2_3:6119253-6119272 | None:intergenic | 30.0% | |
| TATTTGGTATCAACAACTCT+TGG | - | chr2_3:6119289-6119308 | Msa0274290:intron | 30.0% | |
| TTCCTTAAAGGAGTAGAAAA+TGG | - | chr2_3:6119391-6119410 | Msa0274290:CDS | 30.0% | |
| GTCTTATAAAGAGGAAGGAT+GGG | + | chr2_3:6116708-6116727 | None:intergenic | 35.0% | |
| ! | AGTCTTATAAAGAGGAAGGA+TGG | + | chr2_3:6116709-6116728 | None:intergenic | 35.0% |
| !! | ACTTTTGAGTGCCCATAAAT+TGG | - | chr2_3:6116726-6116745 | Msa0274290:three_prime_UTR | 35.0% |
| !! | CTTTTGAGTGCCCATAAATT+GGG | - | chr2_3:6116727-6116746 | Msa0274290:three_prime_UTR | 35.0% |
| !! | TTTTGAGTGCCCATAAATTG+GGG | - | chr2_3:6116728-6116747 | Msa0274290:three_prime_UTR | 35.0% |
| GCATCATCCTTATTCTTTGT+CGG | - | chr2_3:6116818-6116837 | Msa0274290:three_prime_UTR | 35.0% | |
| CATATCACCGACAAAGAATA+AGG | + | chr2_3:6116828-6116847 | None:intergenic | 35.0% | |
| CTTATTCTTTGTCGGTGATA+TGG | - | chr2_3:6116826-6116845 | Msa0274290:three_prime_UTR | 35.0% | |
| AGTTCTATGTAGAGTGGTTT+AGG | + | chr2_3:6116975-6116994 | None:intergenic | 35.0% | |
| ACGTACTTCTTGATATTTGC+AGG | - | chr2_3:6117340-6117359 | Msa0274290:intron | 35.0% | |
| CGTACTTCTTGATATTTGCA+GGG | - | chr2_3:6117341-6117360 | Msa0274290:intron | 35.0% | |
| TTACCACTTTGTCATTGTCA+AGG | + | chr2_3:6117387-6117406 | None:intergenic | 35.0% | |
| ATCCTGGGATTTCAATTGTT+TGG | - | chr2_3:6117410-6117429 | Msa0274290:intron | 35.0% | |
| TCCTGGGATTTCAATTGTTT+GGG | - | chr2_3:6117411-6117430 | Msa0274290:intron | 35.0% | |
| !!! | ATGGTTTTGGTTTACTCTGT+TGG | - | chr2_3:6117445-6117464 | Msa0274290:intron | 35.0% |
| ATCTATAATCTTGCAGGTAC+CGG | - | chr2_3:6118123-6118142 | Msa0274290:CDS | 35.0% | |
| TAGGCTTATATTCAATGGCA+AGG | - | chr2_3:6118195-6118214 | Msa0274290:intron | 35.0% | |
| AAATATGTCACAAGTGGACA+TGG | - | chr2_3:6118506-6118525 | Msa0274290:intron | 35.0% | |
| AATATGTCACAAGTGGACAT+GGG | - | chr2_3:6118507-6118526 | Msa0274290:intron | 35.0% | |
| ! | CATATTAACACGTGTCGTTA+AGG | + | chr2_3:6118737-6118756 | None:intergenic | 35.0% |
| CTTATTGGATCAAACTCACA+TGG | + | chr2_3:6119008-6119027 | None:intergenic | 35.0% | |
| GTGTCCACTAACTATATTTG+AGG | + | chr2_3:6119078-6119097 | None:intergenic | 35.0% | |
| TGGCCTGTTAACAAACATAT+AGG | + | chr2_3:6119191-6119210 | None:intergenic | 35.0% | |
| TTTGTTAACAGGCCAATTAC+TGG | - | chr2_3:6119196-6119215 | Msa0274290:intron | 35.0% | |
| TTCATTGATGCTCCAGTAAT+TGG | + | chr2_3:6119211-6119230 | None:intergenic | 35.0% | |
| ! | TTCTACTCCTTTAAGGAAAG+AGG | + | chr2_3:6119389-6119408 | None:intergenic | 35.0% |
| ! | CACCATTTTCTACTCCTTTA+AGG | + | chr2_3:6119396-6119415 | None:intergenic | 35.0% |
| CTTAAAGGAGTAGAAAATGG+TGG | - | chr2_3:6119394-6119413 | Msa0274290:CDS | 35.0% | |
| ATAAAGAGGAAGGATGGGAT+GGG | + | chr2_3:6116703-6116722 | None:intergenic | 40.0% | |
| TATAAAGAGGAAGGATGGGA+TGG | + | chr2_3:6116704-6116723 | None:intergenic | 40.0% | |
| GCTGATCATTCATCAAGCAA+TGG | - | chr2_3:6116848-6116867 | Msa0274290:three_prime_UTR | 40.0% | |
| AAGCAATGGAAACCACGAAA+TGG | - | chr2_3:6116862-6116881 | Msa0274290:three_prime_UTR | 40.0% | |
| ! | GCATGACTCATCACACTTTT+GGG | + | chr2_3:6116912-6116931 | None:intergenic | 40.0% |
| ! | TGCATGACTCATCACACTTT+TGG | + | chr2_3:6116913-6116932 | None:intergenic | 40.0% |
| ATACACACCTTCTGCAAAAG+AGG | + | chr2_3:6116950-6116969 | None:intergenic | 40.0% | |
| !! | TTGAATGTAGTTGGTAGCAG+AGG | - | chr2_3:6117309-6117328 | Msa0274290:intron | 40.0% |
| GAACCTTGACAATGACAAAG+TGG | - | chr2_3:6117381-6117400 | Msa0274290:intron | 40.0% | |
| ACAAAGTGGTAACACATCCT+GGG | - | chr2_3:6117395-6117414 | Msa0274290:intron | 40.0% | |
| CCTGGGATTTCAATTGTTTG+GGG | - | chr2_3:6117412-6117431 | Msa0274290:intron | 40.0% | |
| TACTCTGTTGGTCACATTTC+TGG | - | chr2_3:6117457-6117476 | Msa0274290:intron | 40.0% | |
| TTCGCATATAAAGCACACGA+CGG | + | chr2_3:6117574-6117593 | None:intergenic | 40.0% | |
| !! | AGACCCAACTTTGAAGCATA+TGG | - | chr2_3:6117659-6117678 | Msa0274290:intron | 40.0% |
| GATGTTATGCGTGACTATGA+TGG | - | chr2_3:6117701-6117720 | Msa0274290:intron | 40.0% | |
| !! | GGCAAGGAAAACCATTTTTC+AGG | - | chr2_3:6118211-6118230 | Msa0274290:intron | 40.0% |
| !! | CAGGAAGTGTTCCTGAAAAA+TGG | + | chr2_3:6118225-6118244 | None:intergenic | 40.0% |
| TGAATTCAACCACAAATGCC+TGG | + | chr2_3:6118261-6118280 | None:intergenic | 40.0% | |
| ! | TATGTTCGTCATTTCTGGAG+TGG | - | chr2_3:6118297-6118316 | Msa0274290:intron | 40.0% |
| AATATCGCAGATTGGTGAGT+TGG | - | chr2_3:6118776-6118795 | Msa0274290:intron | 40.0% | |
| TCTTATTGAGGGAACTCATG+TGG | - | chr2_3:6118940-6118959 | Msa0274290:CDS | 40.0% | |
| GAATTGGGTATCACCTAAAG+TGG | + | chr2_3:6118972-6118991 | None:intergenic | 40.0% | |
| CATGTCGTCACAATTCAGTT+TGG | - | chr2_3:6119132-6119151 | Msa0274290:intron | 40.0% | |
| CATGGGCATATACTTTCATC+CGG | - | chr2_3:6119326-6119345 | Msa0274290:intron | 40.0% | |
| CTCTTACTAATTTCACGCAC+TGG | + | chr2_3:6119364-6119383 | None:intergenic | 40.0% | |
| !! | AAGAGTGCCTCTTTCCTTAA+AGG | - | chr2_3:6119379-6119398 | Msa0274290:CDS | 40.0% |
| GATTTATCAAGGATTGCACG+AGG | - | chr2_3:6119431-6119450 | Msa0274290:CDS | 40.0% | |
| AGAGACCTGCCCCAATTTAT+GGG | + | chr2_3:6116740-6116759 | None:intergenic | 45.0% | |
| ! | GCAAAAGAGGCACATAGTCT+TGG | + | chr2_3:6116937-6116956 | None:intergenic | 45.0% |
| ! | CTATGTGCCTCTTTTGCAGA+AGG | - | chr2_3:6116940-6116959 | Msa0274290:CDS | 45.0% |
| !! | TAGTTGGTAGCAGAGGTTGT+GGG | - | chr2_3:6117316-6117335 | Msa0274290:intron | 45.0% |
| GACAAAGTGGTAACACATCC+TGG | - | chr2_3:6117394-6117413 | Msa0274290:intron | 45.0% | |
| CCCCAAACAATTGAAATCCC+AGG | + | chr2_3:6117415-6117434 | None:intergenic | 45.0% | |
| ! | TGTTTGGGGTCTCACTGTTA+TGG | - | chr2_3:6117426-6117445 | Msa0274290:intron | 45.0% |
| ! | GGGTCTCACTGTTATGGTTT+TGG | - | chr2_3:6117432-6117451 | Msa0274290:intron | 45.0% |
| ! | TTTGGTGGATGCATGAGCAA+TGG | + | chr2_3:6117506-6117525 | None:intergenic | 45.0% |
| TTGCTCATGCATCCACCAAA+AGG | - | chr2_3:6117506-6117525 | Msa0274290:CDS | 45.0% | |
| TGCATCCACCAAAAGGTTTC+CGG | - | chr2_3:6117513-6117532 | Msa0274290:CDS | 45.0% | |
| ! | CTTAACCGGAAACCTTTTGG+TGG | + | chr2_3:6117521-6117540 | None:intergenic | 45.0% |
| ! | CTGCTTAACCGGAAACCTTT+TGG | + | chr2_3:6117524-6117543 | None:intergenic | 45.0% |
| CAAAAGGTTTCCGGTTAAGC+AGG | - | chr2_3:6117522-6117541 | Msa0274290:CDS | 45.0% | |
| CTTGGATCAACTCTTGCAAG+TGG | - | chr2_3:6118166-6118185 | Msa0274290:CDS | 45.0% | |
| CTCTTGCAAGTGGAACACTT+AGG | - | chr2_3:6118176-6118195 | Msa0274290:intron | 45.0% | |
| !! | TTTTCAGGAACACTTCCTGC+TGG | - | chr2_3:6118226-6118245 | Msa0274290:intron | 45.0% |
| TTCTGATCTCCAGGCATTTG+TGG | - | chr2_3:6118249-6118268 | Msa0274290:intron | 45.0% | |
| GGAGATTACCGCTCTATTGT+CGG | + | chr2_3:6118326-6118345 | None:intergenic | 45.0% | |
| AGTAGATCCAACTGCAAGTC+CGG | + | chr2_3:6118802-6118821 | None:intergenic | 45.0% | |
| CATGTGGATCACACCACTTT+AGG | - | chr2_3:6118956-6118975 | Msa0274290:CDS | 45.0% | |
| !! | GGGTCTCACACTTTGGAATT+GGG | + | chr2_3:6118987-6119006 | None:intergenic | 45.0% |
| !! | TGGGTCTCACACTTTGGAAT+TGG | + | chr2_3:6118988-6119007 | None:intergenic | 45.0% |
| ATATGCCCATGTACCAGCTA+TGG | + | chr2_3:6119317-6119336 | None:intergenic | 45.0% | |
| GAGAGACCTGCCCCAATTTA+TGG | + | chr2_3:6116741-6116760 | None:intergenic | 50.0% | |
| !! | GTAGTTGGTAGCAGAGGTTG+TGG | - | chr2_3:6117315-6117334 | Msa0274290:intron | 50.0% |
| !! | AGTTGGTAGCAGAGGTTGTG+GGG | - | chr2_3:6117317-6117336 | Msa0274290:intron | 50.0% |
| ACTCGGATCACCTGCTTAAC+CGG | + | chr2_3:6117535-6117554 | None:intergenic | 50.0% | |
| GATTACCGCTCTATTGTCGG+TGG | + | chr2_3:6118323-6118342 | None:intergenic | 50.0% | |
| CTCACATGGGTCTCACACTT+TGG | + | chr2_3:6118994-6119013 | None:intergenic | 50.0% | |
| GAGCATCAATGAACCCTGCA+AGG | - | chr2_3:6119218-6119237 | Msa0274290:intron | 50.0% | |
| ATGAACCCTGCAAGGAGCTT+AGG | - | chr2_3:6119226-6119245 | Msa0274290:intron | 50.0% | |
| !! | ACAACTCTTGGTGCCATAGC+TGG | - | chr2_3:6119301-6119320 | Msa0274290:intron | 50.0% |
| !! | TTGGTGCCATAGCTGGTACA+TGG | - | chr2_3:6119308-6119327 | Msa0274290:intron | 50.0% |
| !! | TGGTGCCATAGCTGGTACAT+GGG | - | chr2_3:6119309-6119328 | Msa0274290:intron | 50.0% |
| !! | GCACTGGCTTGTTTGTGTAC+CGG | + | chr2_3:6119348-6119367 | None:intergenic | 50.0% |
| GAGTGCCCATAAATTGGGGC+AGG | - | chr2_3:6116732-6116751 | Msa0274290:three_prime_UTR | 55.0% | |
| GCATGAGCAATGGTGACAGC+AGG | + | chr2_3:6117496-6117515 | None:intergenic | 55.0% | |
| !! | TCCTGCTGGTTCTGATCTCC+AGG | - | chr2_3:6118240-6118259 | Msa0274290:intron | 55.0% |
| AGTGGCCACCGACAATAGAG+CGG | - | chr2_3:6118315-6118334 | Msa0274290:intron | 55.0% | |
| ! | TCGCAGATTGGTGAGTTGGC+CGG | - | chr2_3:6118780-6118799 | Msa0274290:intron | 55.0% |
| CAGGTCCTAAGCTCCTTGCA+GGG | + | chr2_3:6119234-6119253 | None:intergenic | 55.0% | |
| ! | TGCAGGGTGTGCTGCTGTTG+TGG | - | chr2_3:6117357-6117376 | Msa0274290:intron | 60.0% |
| GCCTGGAGATCAGAACCAGC+AGG | + | chr2_3:6118244-6118263 | None:intergenic | 60.0% | |
| GAGTTGGCCGGACTTGCAGT+TGG | - | chr2_3:6118792-6118811 | Msa0274290:CDS | 60.0% | |
| GCAGGTCCTAAGCTCCTTGC+AGG | + | chr2_3:6119235-6119254 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6116628 | 6119699 | 6116628 | ID=Msa0274290;Name=Msa0274290 |
| chr2_3 | mRNA | 6116628 | 6119699 | 6116628 | ID=Msa0274290-mRNA-1;Parent=Msa0274290;Name=Msa0274290-mRNA-1;_AED=0.12;_eAED=0.12;_QI=217|1|1|1|1|1|5|273|273 |
| chr2_3 | exon | 6116628 | 6117120 | 6116628 | ID=Msa0274290-mRNA-1:exon:2876;Parent=Msa0274290-mRNA-1 |
| chr2_3 | exon | 6117480 | 6117541 | 6117480 | ID=Msa0274290-mRNA-1:exon:2875;Parent=Msa0274290-mRNA-1 |
| chr2_3 | exon | 6117991 | 6118188 | 6117991 | ID=Msa0274290-mRNA-1:exon:2874;Parent=Msa0274290-mRNA-1 |
| chr2_3 | exon | 6118784 | 6119008 | 6118784 | ID=Msa0274290-mRNA-1:exon:2873;Parent=Msa0274290-mRNA-1 |
| chr2_3 | exon | 6119366 | 6119699 | 6119366 | ID=Msa0274290-mRNA-1:exon:2872;Parent=Msa0274290-mRNA-1 |
| chr2_3 | five_prime_UTR | 6119483 | 6119699 | 6119483 | ID=Msa0274290-mRNA-1:five_prime_utr;Parent=Msa0274290-mRNA-1 |
| chr2_3 | CDS | 6119366 | 6119482 | 6119366 | ID=Msa0274290-mRNA-1:cds;Parent=Msa0274290-mRNA-1 |
| chr2_3 | CDS | 6118784 | 6119008 | 6118784 | ID=Msa0274290-mRNA-1:cds;Parent=Msa0274290-mRNA-1 |
| chr2_3 | CDS | 6117991 | 6118188 | 6117991 | ID=Msa0274290-mRNA-1:cds;Parent=Msa0274290-mRNA-1 |
| chr2_3 | CDS | 6117480 | 6117541 | 6117480 | ID=Msa0274290-mRNA-1:cds;Parent=Msa0274290-mRNA-1 |
| chr2_3 | CDS | 6116901 | 6117120 | 6116901 | ID=Msa0274290-mRNA-1:cds;Parent=Msa0274290-mRNA-1 |
| chr2_3 | three_prime_UTR | 6116628 | 6116900 | 6116628 | ID=Msa0274290-mRNA-1:three_prime_utr;Parent=Msa0274290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
