Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1118330 | 0.810637 | 1.044254e-50 | -8.615850e-47 |
| Msa0015390 | Msa1118330 | 0.811178 | 7.973496e-51 | -8.615850e-47 |
| Msa0017510 | Msa1118330 | 0.801300 | 9.610329e-49 | -8.615850e-47 |
| Msa0061340 | Msa1118330 | 0.804847 | 1.774489e-49 | -8.615850e-47 |
| Msa0103170 | Msa1118330 | 0.814574 | 1.437143e-51 | -8.615850e-47 |
| Msa0610880 | Msa1118330 | 0.804680 | 1.922765e-49 | -8.615850e-47 |
| Msa0616160 | Msa1118330 | 0.803589 | 3.243269e-49 | -8.615850e-47 |
| Msa0649110 | Msa1118330 | 0.810605 | 1.060814e-50 | -8.615850e-47 |
| Msa0657580 | Msa1118330 | 0.851570 | 8.144975e-61 | -8.615850e-47 |
| Msa0669320 | Msa1118330 | 0.803364 | 3.610795e-49 | -8.615850e-47 |
| Msa0698540 | Msa1118330 | 0.814356 | 1.605995e-51 | -8.615850e-47 |
| Msa0731940 | Msa1118330 | 0.804955 | 1.684990e-49 | -8.615850e-47 |
| Msa0748970 | Msa1118330 | 0.807162 | 5.782668e-50 | -8.615850e-47 |
| Msa0764570 | Msa1118330 | 0.806492 | 8.013576e-50 | -8.615850e-47 |
| Msa0765910 | Msa1118330 | 0.803912 | 2.779909e-49 | -8.615850e-47 |
| Msa0832340 | Msa1118330 | 0.827266 | 1.720590e-54 | -8.615850e-47 |
| Msa0131770 | Msa1118330 | 0.810781 | 9.717516e-51 | -8.615850e-47 |
| Msa0157290 | Msa1118330 | 0.802510 | 5.421139e-49 | -8.615850e-47 |
| Msa0166560 | Msa1118330 | 0.815350 | 9.668255e-52 | -8.615850e-47 |
| Msa0180500 | Msa1118330 | 0.823500 | 1.339740e-53 | -8.615850e-47 |
| Msa0195980 | Msa1118330 | 0.815802 | 7.669598e-52 | -8.615850e-47 |
| Msa0211150 | Msa1118330 | 0.824278 | 8.803936e-54 | -8.615850e-47 |
| Msa0220740 | Msa1118330 | 0.824453 | 8.006897e-54 | -8.615850e-47 |
| Msa0228070 | Msa1118330 | 0.801417 | 9.094614e-49 | -8.615850e-47 |
| Msa0367870 | Msa1118330 | 0.803073 | 4.148752e-49 | -8.615850e-47 |
| Msa0370110 | Msa1118330 | 0.806615 | 7.547787e-50 | -8.615850e-47 |
| Msa0413410 | Msa1118330 | 0.800011 | 1.760281e-48 | -8.615850e-47 |
| Msa0453350 | Msa1118330 | 0.811323 | 7.416119e-51 | -8.615850e-47 |
| Msa0459260 | Msa1118330 | 0.814891 | 1.222605e-51 | -8.615850e-47 |
| Msa0464680 | Msa1118330 | 0.800568 | 1.355666e-48 | -8.615850e-47 |
| Msa0467060 | Msa1118330 | 0.804581 | 2.016667e-49 | -8.615850e-47 |
| Msa0989620 | Msa1118330 | 0.805521 | 1.282747e-49 | -8.615850e-47 |
| Msa1009070 | Msa1118330 | 0.801513 | 8.690578e-49 | -8.615850e-47 |
| Msa1052830 | Msa1118330 | 0.806887 | 6.612872e-50 | -8.615850e-47 |
| Msa1058710 | Msa1118330 | 0.809033 | 2.311006e-50 | -8.615850e-47 |
| Msa1075540 | Msa1118330 | 0.809782 | 1.596188e-50 | -8.615850e-47 |
| Msa0304510 | Msa1118330 | 0.813940 | 1.984115e-51 | -8.615850e-47 |
| Msa0310750 | Msa1118330 | 0.842144 | 3.093509e-58 | -8.615850e-47 |
| Msa0351110 | Msa1118330 | 0.811950 | 5.416856e-51 | -8.615850e-47 |
| Msa1109680 | Msa1118330 | 0.805400 | 1.359623e-49 | -8.615850e-47 |
| Msa1118330 | Msa1137570 | 0.845762 | 3.317925e-59 | -8.615850e-47 |
| Msa1118330 | Msa1189070 | 0.800544 | 1.371081e-48 | -8.615850e-47 |
| Msa1118330 | Msa1242240 | 0.814529 | 1.470703e-51 | -8.615850e-47 |
| Msa1118330 | Msa1253020 | 0.808317 | 3.286056e-50 | -8.615850e-47 |
| Msa1118330 | Msa1274520 | 0.812763 | 3.599224e-51 | -8.615850e-47 |
| Msa1118330 | Msa1276890 | 0.813661 | 2.286438e-51 | -8.615850e-47 |
| Msa1118330 | Msa1283840 | 0.818115 | 2.319085e-52 | -8.615850e-47 |
| Msa1118330 | Msa1284260 | 0.817179 | 3.770366e-52 | -8.615850e-47 |
| Msa1118330 | Msa1286800 | 0.810991 | 8.752093e-51 | -8.615850e-47 |
| Msa1118330 | Msa1287190 | 0.803770 | 2.974921e-49 | -8.615850e-47 |
| Msa1118330 | Msa1287460 | 0.811378 | 7.215681e-51 | -8.615850e-47 |
| Msa1118330 | Msa1288050 | 0.993878 | 6.800008e-203 | -8.615850e-47 |
| Msa1118330 | Msa1294820 | 0.811521 | 6.714591e-51 | -8.615850e-47 |
| Msa1118330 | Msa1306840 | 0.800872 | 1.175280e-48 | -8.615850e-47 |
| Msa1118330 | Msa1306850 | 0.801026 | 1.093558e-48 | -8.615850e-47 |
| Msa1118330 | Msa1306860 | 0.801242 | 9.875735e-49 | -8.615850e-47 |
| Msa1118330 | Msa1320410 | 0.803442 | 3.478897e-49 | -8.615850e-47 |
| Msa1118330 | Msa1328710 | 0.800203 | 1.609403e-48 | -8.615850e-47 |
| Msa1118330 | Msa1348890 | 0.800819 | 1.205366e-48 | -8.615850e-47 |
| Msa1118330 | Msa1353980 | 0.801301 | 9.602821e-49 | -8.615850e-47 |
| Msa1118330 | Msa1359040 | 0.805373 | 1.377340e-49 | -8.615850e-47 |
| Msa1118330 | Msa1394500 | 0.829266 | 5.667865e-55 | -8.615850e-47 |
| Msa1118330 | Msa1395900 | 0.804917 | 1.716272e-49 | -8.615850e-47 |
| Msa1118330 | Msa1395910 | 0.822119 | 2.808365e-53 | -8.615850e-47 |
| Msa1118330 | Msa1402730 | 0.810364 | 1.195979e-50 | -8.615850e-47 |
| Msa1118330 | Msa1437270 | 0.816531 | 5.270794e-52 | -8.615850e-47 |
| Msa1118330 | Msa1452240 | 0.804936 | 1.700230e-49 | -8.615850e-47 |
| Msa1118330 | Msa1458750 | 0.840429 | 8.742283e-58 | -8.615850e-47 |
| Msa1118330 | Msa1466540 | 0.807621 | 4.621776e-50 | -8.615850e-47 |
| Msa0495330 | Msa1118330 | 0.805372 | 1.378187e-49 | -8.615850e-47 |
| Msa0509900 | Msa1118330 | 0.811234 | 7.751708e-51 | -8.615850e-47 |
| Msa0519000 | Msa1118330 | 0.823782 | 1.150609e-53 | -8.615850e-47 |
| Msa0545700 | Msa1118330 | 0.805388 | 1.367336e-49 | -8.615850e-47 |
| Msa0578860 | Msa1118330 | 0.816670 | 4.905267e-52 | -8.615850e-47 |
| Msa0585230 | Msa1118330 | 0.800893 | 1.163795e-48 | -8.615850e-47 |
| Msa0844490 | Msa1118330 | 0.803519 | 3.353568e-49 | -8.615850e-47 |
| Msa0849030 | Msa1118330 | 0.811051 | 8.493765e-51 | -8.615850e-47 |
| Msa0868700 | Msa1118330 | 0.813410 | 2.596015e-51 | -8.615850e-47 |
| Msa0875290 | Msa1118330 | 0.814344 | 1.616422e-51 | -8.615850e-47 |
| Msa0888130 | Msa1118330 | 0.813319 | 2.718335e-51 | -8.615850e-47 |
| Msa0907950 | Msa1118330 | 0.811447 | 6.968497e-51 | -8.615850e-47 |
| Msa0907960 | Msa1118330 | 0.829349 | 5.411706e-55 | -8.615850e-47 |
| Msa0925290 | Msa1118330 | 0.805205 | 1.493344e-49 | -8.615850e-47 |
| Msa0927380 | Msa1118330 | 0.825587 | 4.322561e-54 | -8.615850e-47 |
| Msa0936300 | Msa1118330 | 0.809823 | 1.563727e-50 | -8.615850e-47 |
| Msa0947660 | Msa1118330 | 0.812348 | 4.435677e-51 | -8.615850e-47 |
| Msa0958540 | Msa1118330 | 0.804276 | 2.335125e-49 | -8.615850e-47 |
| Msa0959360 | Msa1118330 | 0.803635 | 3.172343e-49 | -8.615850e-47 |
| Msa0969520 | Msa1118330 | 0.842932 | 1.911842e-58 | -8.615850e-47 |
| Msa0969810 | Msa1118330 | 0.829109 | 6.187508e-55 | -8.615850e-47 |
| Msa0974070 | Msa1118330 | 0.806770 | 6.999506e-50 | -8.615850e-47 |
| Msa0976670 | Msa1118330 | 0.801082 | 1.064680e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 66 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGGGTTTAGATGATTTC+TGG | 0.138133 | 7_3:-66884155 | Msa1118320:intron |
| ACATGATTCACTGTCTCTTC+TGG | 0.283171 | 7_3:-66885228 | Msa1118320:intron |
| TCGATCAGAAAGTGATGATT+AGG | 0.283964 | 7_3:-66884172 | Msa1118320:intron |
| GAACCGACAGATTCGTTTAC+AGG | 0.305582 | 7_3:-66884124 | Msa1118320:intron |
| ACATGTGTAGCTTGTGTAAT+TGG | 0.307835 | 7_3:-66887555 | Msa1118320:intron |
| ATTGATTGGTTTAGCTGATT+AGG | 0.315318 | 7_3:-66884089 | Msa1118320:intron |
| GCAGAAGTAGCTTGTCTAAC+AGG | 0.316964 | 7_3:-66887591 | Msa1118320:intron |
| GGTGATGAGTTTAGTGAATC+TGG | 0.323611 | 7_3:+66885060 | Msa1118330:CDS |
| AGATGCAGCCTGTTGATTTC+CGG | 0.324976 | 7_3:-66887700 | Msa1118320:intron |
| TGATTTGTTCCTTGAGTCTC+AGG | 0.331319 | 7_3:-66887525 | Msa1118320:intron |
| AGTTAGTGATCTGATGAATT+GGG | 0.332372 | 7_3:-66884006 | Msa1118320:intron |
| CGATCAGAAAGTGATGATTA+GGG | 0.389957 | 7_3:-66884171 | Msa1118320:intron |
| GGAATCAAAACGGGATTGAT+TGG | 0.394305 | 7_3:-66884103 | Msa1118320:intron |
| GAAACAACAACAAACTTTGA+TGG | 0.404015 | 7_3:+66884293 | Msa1118330:CDS |
| GTAGGTTCTGACCTTGGATC+TGG | 0.405987 | 7_3:+66885150 | Msa1118330:CDS |
| AAGTTAGTGATCTGATGAAT+TGG | 0.408556 | 7_3:-66884007 | Msa1118320:intron |
| AGCAGGAACCGGAAATCAAC+AGG | 0.427785 | 7_3:+66887692 | Msa1118330:CDS |
| TCCACTGTTGTTCTTCGCCA+TGG | 0.430001 | 7_3:-66884213 | Msa1118320:intron |
| GTTGATTTCCGGTTCCTGCT+TGG | 0.430504 | 7_3:-66887689 | Msa1118320:intron |
| ATCACTCCTCTTCTTCGCCA+TGG | 0.434755 | 7_3:-66884336 | Msa1118320:intron |
| GGTGATGACTTTAGTGAATC+TGG | 0.436949 | 7_3:+66885102 | Msa1118330:CDS |
| TGTTCTTCGCCATGGAGATT+TGG | 0.442029 | 7_3:-66884205 | Msa1118320:intron |
| GTCACAGGCTACACAACAAA+AGG | 0.455734 | 7_3:+66887725 | Msa1118330:CDS |
| AAGGGTAGTGAGGGTGATGA+GGG | 0.468593 | 7_3:+66885036 | Msa1118330:intron |
| TCGTTTACAGGAATCAAAAC+GGG | 0.473606 | 7_3:-66884112 | Msa1118320:intron |
| TGGATCTGGATCTGAATTTG+AGG | 0.478126 | 7_3:+66885164 | Msa1118330:CDS |
| GCTAGGAGCCAAGCAGGAAC+CGG | 0.479519 | 7_3:+66887681 | Msa1118330:CDS |
| AGTCAAGCTAGGAGCCAAGC+AGG | 0.479632 | 7_3:+66887675 | Msa1118330:CDS |
| GGATTTGCAATGAGTTCCAT+TGG | 0.483374 | 7_3:-66884040 | Msa1118320:intron |
| TTCGTTTACAGGAATCAAAA+CGG | 0.484450 | 7_3:-66884113 | Msa1118320:intron |
| TGCCTCATAGATGCAGTGCT+TGG | 0.496022 | 7_3:-66887645 | Msa1118320:intron |
| CAAGGGTAGTGAGGGTGATG+AGG | 0.505220 | 7_3:+66885035 | Msa1118330:intron |
| AGTGAATCTGGTGATGATGC+TGG | 0.507663 | 7_3:+66885114 | Msa1118330:CDS |
| GTTGATGTAGGTTCTGACCT+TGG | 0.513700 | 7_3:+66885144 | Msa1118330:CDS |
| GCTGCTTCTGTTACACATGT+TGG | 0.518076 | 7_3:+66887621 | Msa1118330:CDS |
| GATTTGGGATTAGACGGAAT+CGG | 0.522299 | 7_3:-66884061 | Msa1118320:intron |
| CAGTGGAAAGGCGAAGAAGA+AGG | 0.522575 | 7_3:+66884229 | Msa1118330:CDS |
| ACAGGCTGCATCTGTGTCAC+AGG | 0.524280 | 7_3:+66887710 | Msa1118330:CDS |
| GGTTATGATGATTATGATGT+AGG | 0.533114 | 7_3:+66885081 | Msa1118330:CDS |
| TAACTTCTCATCTTCTCCAA+TGG | 0.543162 | 7_3:+66884024 | Msa1118330:five_prime_UTR |
| ACAACAAAAGGGTGCCAGAA+GGG | 0.543216 | 7_3:+66887737 | Msa1118330:CDS |
| GACAAGCATTGAACGTGGAA+AGG | 0.548042 | 7_3:+66884259 | Msa1118330:CDS |
| ACGTGGAAAGGCGCAGAAGA+AGG | 0.553010 | 7_3:+66884271 | Msa1118330:CDS |
| GTTAGTGATCTGATGAATTG+GGG | 0.567397 | 7_3:-66884005 | Msa1118320:intron |
| GGTAGTGAGGGTGATGAGGG+TGG | 0.567862 | 7_3:+66885039 | Msa1118330:intron |
| CAACAAAAGGGTGCCAGAAG+GGG | 0.567973 | 7_3:+66887738 | Msa1118330:CDS |
| AAAAGGGTGCCAGAAGGGGA+AGG | 0.572458 | 7_3:+66887742 | Msa1118330:CDS |
| ATGGCGAAGAAGAGGAGTGA+TGG | 0.588911 | 7_3:+66884338 | Msa1118330:CDS |
| TCACAGGCTACACAACAAAA+GGG | 0.596434 | 7_3:+66887726 | Msa1118330:CDS |
| ATGAAACCATGGCGAAGAAG+AGG | 0.596880 | 7_3:+66884330 | Msa1118330:CDS |
| GACCAAGCACTGCATCTATG+AGG | 0.597893 | 7_3:+66887643 | Msa1118330:CDS |
| ATTCCTGTAAACGAATCTGT+CGG | 0.603666 | 7_3:+66884121 | Msa1118330:five_prime_UTR |
| CACAACAAAAGGGTGCCAGA+AGG | 0.611040 | 7_3:+66887736 | Msa1118330:CDS |
| GGCGAAGAACAACAGTGGAA+AGG | 0.614693 | 7_3:+66884217 | Msa1118330:CDS |
| CGCGCAGGAGAATGAAACCA+TGG | 0.621871 | 7_3:+66884319 | Msa1118330:CDS |
| AAACAAACACCAAATCTCCA+TGG | 0.632313 | 7_3:+66884196 | Msa1118330:exon |
| GGAAACGCGCAGAAATGTCA+AGG | 0.633790 | 7_3:+66884359 | Msa1118330:CDS |
| CAAATTCAGATCCAGATCCA+AGG | 0.634156 | 7_3:-66885161 | Msa1118320:intron |
| GGCAAGCTAAGAGTCAAGCT+AGG | 0.636941 | 7_3:+66887664 | Msa1118330:CDS |
| AAACTTTGATGGAAACGCGC+AGG | 0.637373 | 7_3:+66884304 | Msa1118330:CDS |
| GTGACACATCCTGAGACTCA+AGG | 0.638075 | 7_3:+66887516 | Msa1118330:CDS |
| GCTGGTGAAGAAGTTGATGT+AGG | 0.648199 | 7_3:+66885132 | Msa1118330:CDS |
| AAAGCTCAAAGTGAGACACT+AGG | 0.666743 | 7_3:+66887771 | Msa1118330:CDS |
| TCCATGGCGAAGAACAACAG+TGG | 0.683905 | 7_3:+66884212 | Msa1118330:exon |
| TTAGTGATCTGATGAATTGG+GGG | 0.699405 | 7_3:-66884004 | Msa1118320:intron |
| ACAATGACAAGCATTGAACG+TGG | 0.706633 | 7_3:+66884254 | Msa1118330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAAAAAAAAAAAGT+AGG | + | chr7_3:66884455-66884474 | Msa1118330:intron | 10.0% |
| !! | TTTGATAAAAAAAAAAAGTA+GGG | + | chr7_3:66884456-66884475 | Msa1118330:intron | 10.0% |
| !! | AATAATTAAATAATCAAGTA+TGG | - | chr7_3:66886269-66886288 | Msa1118320:intron | 10.0% |
| !! | ATCTTAACAAAATTCAATAT+AGG | + | chr7_3:66886204-66886223 | Msa1118330:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTCGT+TGG | + | chr7_3:66884478-66884497 | Msa1118330:intron | 20.0% |
| !!! | ATAGTGATTTTGATGAAAAT+TGG | + | chr7_3:66885187-66885206 | Msa1118330:CDS | 20.0% |
| !!! | TAGTGATTTTGATGAAAATT+GGG | + | chr7_3:66885188-66885207 | Msa1118330:CDS | 20.0% |
| !! | GTATTTAAACAAAAATGAGA+AGG | + | chr7_3:66885545-66885564 | Msa1118330:intron | 20.0% |
| !! | TTAATAACTCTCATGTAAAA+TGG | - | chr7_3:66885603-66885622 | Msa1118320:intron | 20.0% |
| !!! | GTTTTAATCAAGAGTAAATT+AGG | + | chr7_3:66885939-66885958 | Msa1118330:intron | 20.0% |
| !! | ACAAAATTCAATATAGGAAA+TGG | + | chr7_3:66886210-66886229 | Msa1118330:intron | 20.0% |
| !!! | TTTTTTATTTCTTAACACCA+GGG | + | chr7_3:66886331-66886350 | Msa1118330:intron | 20.0% |
| !! | TTTATATATCACTTTGTTAC+AGG | + | chr7_3:66887099-66887118 | Msa1118330:intron | 20.0% |
| !!! | GCATTTATAACTGAATTTTA+TGG | + | chr7_3:66887424-66887443 | Msa1118330:intron | 20.0% |
| ! | TATGCTTTACTGTAAAAGTA+TGG | + | chr7_3:66884402-66884421 | Msa1118330:intron | 25.0% |
| !! | TTTTTATTGTTTTCGTTGGT+TGG | + | chr7_3:66884482-66884501 | Msa1118330:intron | 25.0% |
| !!! | GTTCTTTTTTCAATACAACT+AGG | + | chr7_3:66884593-66884612 | Msa1118330:intron | 25.0% |
| ! | ATCTTTATCATATTGACAGA+TGG | - | chr7_3:66884619-66884638 | Msa1118320:intron | 25.0% |
| ! | ATTTCACCATTTAAATATGC+AGG | - | chr7_3:66884682-66884701 | Msa1118320:intron | 25.0% |
| ! | TGAGATTAACACATTAGATT+TGG | + | chr7_3:66884732-66884751 | Msa1118330:intron | 25.0% |
| ! | TCCTATCATTGTTACAAATT+TGG | - | chr7_3:66884758-66884777 | Msa1118320:intron | 25.0% |
| ! | TAAATATGCTGATGTGTATT+TGG | + | chr7_3:66884894-66884913 | Msa1118330:intron | 25.0% |
| !! | GTTTTGTGACATTTATGTAT+AGG | - | chr7_3:66885666-66885685 | Msa1118320:intron | 25.0% |
| ! | ATACATAAATGTCACAAAAC+TGG | + | chr7_3:66885666-66885685 | Msa1118330:intron | 25.0% |
| ! | AAGAATACTGATCAATTTCT+TGG | - | chr7_3:66885724-66885743 | Msa1118320:intron | 25.0% |
| !!! | GTTTTTTATTTCTTAACACC+AGG | + | chr7_3:66886330-66886349 | Msa1118330:intron | 25.0% |
| !! | AGCACTTATATGGAAATTTT+AGG | + | chr7_3:66886410-66886429 | Msa1118330:intron | 25.0% |
| !! | ATTTTATGTTGAGATACGAA+GGG | + | chr7_3:66886743-66886762 | Msa1118330:intron | 25.0% |
| !!! | TCATTTTTTGATGTGTCAAA+TGG | + | chr7_3:66886856-66886875 | Msa1118330:intron | 25.0% |
| ! | TTCATGCAATATGTTGTATT+TGG | + | chr7_3:66886956-66886975 | Msa1118330:intron | 25.0% |
| ! | TATAACCAAACACATTATTC+AGG | - | chr7_3:66887035-66887054 | Msa1118320:intron | 25.0% |
| AGTTAGTGATCTGATGAATT+GGG | - | chr7_3:66884009-66884028 | Msa1118320:intron | 30.0% | |
| AAGTTAGTGATCTGATGAAT+TGG | - | chr7_3:66884010-66884029 | Msa1118320:intron | 30.0% | |
| !! | ATTGATTGGTTTAGCTGATT+AGG | - | chr7_3:66884092-66884111 | Msa1118320:intron | 30.0% |
| TTCGTTTACAGGAATCAAAA+CGG | - | chr7_3:66884116-66884135 | Msa1118320:intron | 30.0% | |
| ATTAGGGTTTAGATGATTTC+TGG | - | chr7_3:66884158-66884177 | Msa1118320:intron | 30.0% | |
| GAAACAACAACAAACTTTGA+TGG | + | chr7_3:66884293-66884312 | Msa1118330:CDS | 30.0% | |
| GCCAAATTTGTAACAATGAT+AGG | + | chr7_3:66884754-66884773 | Msa1118330:intron | 30.0% | |
| ! | ATCCTGAATCAACTAAGTTT+TGG | + | chr7_3:66884779-66884798 | Msa1118330:intron | 30.0% |
| ! | TACCAAAACTTAGTTGATTC+AGG | - | chr7_3:66884784-66884803 | Msa1118320:intron | 30.0% |
| ATCAGTACATATCAGCATAA+GGG | - | chr7_3:66884974-66884993 | Msa1118320:intron | 30.0% | |
| GGTTATGATGATTATGATGT+AGG | + | chr7_3:66885081-66885100 | Msa1118330:CDS | 30.0% | |
| !! | ATTTTGATGAAAATTGGGCT+TGG | + | chr7_3:66885193-66885212 | Msa1118330:CDS | 30.0% |
| ! | GGTAAAATAGTTGTTGTTGA+TGG | + | chr7_3:66885258-66885277 | Msa1118330:intron | 30.0% |
| ! | AAAATAGTTGTTGTTGATGG+TGG | + | chr7_3:66885261-66885280 | Msa1118330:intron | 30.0% |
| CAAAGTCTTCAATAGTAGTT+GGG | - | chr7_3:66885329-66885348 | Msa1118320:intron | 30.0% | |
| ACAAAGTCTTCAATAGTAGT+TGG | - | chr7_3:66885330-66885349 | Msa1118320:intron | 30.0% | |
| AAGAATATGGCTTGAAATCT+AGG | + | chr7_3:66885514-66885533 | Msa1118330:intron | 30.0% | |
| TTTGATGCTAAGTAGATATC+AGG | + | chr7_3:66885803-66885822 | Msa1118330:intron | 30.0% | |
| TAGAGCAAAAACAAAAGCTT+TGG | + | chr7_3:66885830-66885849 | Msa1118330:intron | 30.0% | |
| AATCAAGAGTAAATTAGGTG+TGG | + | chr7_3:66885944-66885963 | Msa1118330:intron | 30.0% | |
| ACATACATCCTAGAAAATAC+TGG | - | chr7_3:66885975-66885994 | Msa1118320:intron | 30.0% | |
| TGTTTCTTGAAAGGAAGATA+TGG | + | chr7_3:66886059-66886078 | Msa1118330:intron | 30.0% | |
| GTTTCTTGAAAGGAAGATAT+GGG | + | chr7_3:66886060-66886079 | Msa1118330:intron | 30.0% | |
| TTTCTTGAAAGGAAGATATG+GGG | + | chr7_3:66886061-66886080 | Msa1118330:intron | 30.0% | |
| TCAACAATTGCAAAAGCTAT+GGG | - | chr7_3:66886134-66886153 | Msa1118320:intron | 30.0% | |
| ! | TTATGTGTGAAGCACTTATA+TGG | + | chr7_3:66886400-66886419 | Msa1118330:intron | 30.0% |
| !! | AATTTTAGGAAGAGATTTCC+TGG | + | chr7_3:66886424-66886443 | Msa1118330:intron | 30.0% |
| !! | AAGCATTGAAAGAAGCTTTA+TGG | + | chr7_3:66886449-66886468 | Msa1118330:intron | 30.0% |
| ! | GATTTTATGTTGAGATACGA+AGG | + | chr7_3:66886742-66886761 | Msa1118330:intron | 30.0% |
| ! | TTTTATGTTGAGATACGAAG+GGG | + | chr7_3:66886744-66886763 | Msa1118330:intron | 30.0% |
| TCCTATAATTCAGAAGAGAT+TGG | + | chr7_3:66886774-66886793 | Msa1118330:intron | 30.0% | |
| TCCAATCTCTTCTGAATTAT+AGG | - | chr7_3:66886778-66886797 | Msa1118320:intron | 30.0% | |
| GAGATTGGAGACATTAAAAA+AGG | + | chr7_3:66886789-66886808 | Msa1118330:intron | 30.0% | |
| ACATTAAAAAAGGAAGCTGA+TGG | + | chr7_3:66886799-66886818 | Msa1118330:intron | 30.0% | |
| ATTATGTTGCTCATTGGTAT+AGG | + | chr7_3:66887001-66887020 | Msa1118330:intron | 30.0% | |
| ! | TTGGTTATATTTTGCTCATC+TGG | + | chr7_3:66887046-66887065 | Msa1118330:intron | 30.0% |
| GTCAATTAACATATTGTGTC+TGG | + | chr7_3:66887076-66887095 | Msa1118330:intron | 30.0% | |
| AACATCATATTGCCTAACAA+TGG | + | chr7_3:66887149-66887168 | Msa1118330:intron | 30.0% | |
| !! | CATAATTTTGGTCCATTGTT+AGG | - | chr7_3:66887164-66887183 | Msa1118320:intron | 30.0% |
| CTAACAATGGACCAAAATTA+TGG | + | chr7_3:66887162-66887181 | Msa1118330:intron | 30.0% | |
| ! | TGCAAAAGGTGTAATGAATT+AGG | + | chr7_3:66887320-66887339 | Msa1118330:intron | 30.0% |
| TTAGTGATCTGATGAATTGG+GGG | - | chr7_3:66884007-66884026 | Msa1118320:intron | 35.0% | |
| GTTAGTGATCTGATGAATTG+GGG | - | chr7_3:66884008-66884027 | Msa1118320:intron | 35.0% | |
| TAACTTCTCATCTTCTCCAA+TGG | + | chr7_3:66884024-66884043 | Msa1118330:five_prime_UTR | 35.0% | |
| !!! | GTTTTCGATTTGGGATTAGA+CGG | - | chr7_3:66884070-66884089 | Msa1118320:intron | 35.0% |
| ! | GCTGATTAGGTTTTCGATTT+GGG | - | chr7_3:66884079-66884098 | Msa1118320:intron | 35.0% |
| ! | AGCTGATTAGGTTTTCGATT+TGG | - | chr7_3:66884080-66884099 | Msa1118320:intron | 35.0% |
| TCGTTTACAGGAATCAAAAC+GGG | - | chr7_3:66884115-66884134 | Msa1118320:intron | 35.0% | |
| ATTCCTGTAAACGAATCTGT+CGG | + | chr7_3:66884121-66884140 | Msa1118330:five_prime_UTR | 35.0% | |
| CGATCAGAAAGTGATGATTA+GGG | - | chr7_3:66884174-66884193 | Msa1118320:intron | 35.0% | |
| TCGATCAGAAAGTGATGATT+AGG | - | chr7_3:66884175-66884194 | Msa1118320:intron | 35.0% | |
| AAACAAACACCAAATCTCCA+TGG | + | chr7_3:66884196-66884215 | Msa1118330:exon | 35.0% | |
| AAGATTAGATTCCACCACAA+AGG | + | chr7_3:66884634-66884653 | Msa1118330:intron | 35.0% | |
| CATTTAAATATGCAGGTAGC+GGG | - | chr7_3:66884675-66884694 | Msa1118320:intron | 35.0% | |
| CCATTTAAATATGCAGGTAG+CGG | - | chr7_3:66884676-66884695 | Msa1118320:intron | 35.0% | |
| GGTGAAATATTTGAACCTGA+TGG | + | chr7_3:66884694-66884713 | Msa1118330:intron | 35.0% | |
| TATTTGAACCTGATGGTACT+TGG | + | chr7_3:66884701-66884720 | Msa1118330:intron | 35.0% | |
| ATTTGAACCTGATGGTACTT+GGG | + | chr7_3:66884702-66884721 | Msa1118330:intron | 35.0% | |
| CAGCATATTTAATGCCCTTA+TGG | - | chr7_3:66884885-66884904 | Msa1118320:intron | 35.0% | |
| TCAGTACATATCAGCATAAG+GGG | - | chr7_3:66884973-66884992 | Msa1118320:intron | 35.0% | |
| CATCAGTACATATCAGCATA+AGG | - | chr7_3:66884975-66884994 | Msa1118320:intron | 35.0% | |
| CTTATGCTGATATGTACTGA+TGG | + | chr7_3:66884973-66884992 | Msa1118330:intron | 35.0% | |
| ! | GATATGTACTGATGGTAATG+AGG | + | chr7_3:66884981-66885000 | Msa1118330:intron | 35.0% |
| TGAGGAAAACATTGATACTG+AGG | + | chr7_3:66884999-66885018 | Msa1118330:intron | 35.0% | |
| GAGGAAAACATTGATACTGA+GGG | + | chr7_3:66885000-66885019 | Msa1118330:intron | 35.0% | |
| ! | GAAGACTTTGTTGATGAAGA+TGG | + | chr7_3:66885339-66885358 | Msa1118330:intron | 35.0% |
| CATCAGGAAGTTTGAACTTT+GGG | - | chr7_3:66885425-66885444 | Msa1118320:intron | 35.0% | |
| AGAACTGCTGTGAAAGAATA+TGG | + | chr7_3:66885501-66885520 | Msa1118330:intron | 35.0% | |
| TACTCACAAGACTTACTTTC+AGG | + | chr7_3:66885626-66885645 | Msa1118330:intron | 35.0% | |
| AATTTCTTGGCTATGAGAGT+AGG | - | chr7_3:66885711-66885730 | Msa1118320:intron | 35.0% | |
| ! | AAAGCTTTAATGCGCATAGT+AGG | - | chr7_3:66885756-66885775 | Msa1118320:intron | 35.0% |
| TACAAACAGAGTGCAAAACT+AGG | + | chr7_3:66885775-66885794 | Msa1118330:intron | 35.0% | |
| !! | AAAAGCTTTGGAGATGATTG+AGG | + | chr7_3:66885842-66885861 | Msa1118330:intron | 35.0% |
| !! | AAAGCTTTGGAGATGATTGA+GGG | + | chr7_3:66885843-66885862 | Msa1118330:intron | 35.0% |
| GAGTTGTTAAGAAGTAATCC+AGG | + | chr7_3:66885909-66885928 | Msa1118330:intron | 35.0% | |
| TTGATTAAAACTGTGCTTCC+TGG | - | chr7_3:66885930-66885949 | Msa1118320:intron | 35.0% | |
| AAGAGTAAATTAGGTGTGGA+TGG | + | chr7_3:66885948-66885967 | Msa1118330:intron | 35.0% | |
| AGAGTAAATTAGGTGTGGAT+GGG | + | chr7_3:66885949-66885968 | Msa1118330:intron | 35.0% | |
| !! | CTTGATGGTTGTTTCTTGAA+AGG | + | chr7_3:66886050-66886069 | Msa1118330:intron | 35.0% |
| TTCTTGAAAGGAAGATATGG+GGG | + | chr7_3:66886062-66886081 | Msa1118330:intron | 35.0% | |
| GGTCAATTATTAACTGCTGT+GGG | + | chr7_3:66886083-66886102 | Msa1118330:intron | 35.0% | |
| CTCAACAATTGCAAAAGCTA+TGG | - | chr7_3:66886135-66886154 | Msa1118320:intron | 35.0% | |
| ! | CATAGCTTTTGCAATTGTTG+AGG | + | chr7_3:66886133-66886152 | Msa1118330:intron | 35.0% |
| AATTGTTGAGGCTGAAACAA+AGG | + | chr7_3:66886145-66886164 | Msa1118330:intron | 35.0% | |
| ATGGTTTACTAACCTTCTTC+TGG | + | chr7_3:66886178-66886197 | Msa1118330:intron | 35.0% | |
| ATTCATATCTGACCAACAGA+AGG | + | chr7_3:66886235-66886254 | Msa1118330:intron | 35.0% | |
| ! | ATGGATTAAGTACCTTCTGT+TGG | - | chr7_3:66886250-66886269 | Msa1118320:intron | 35.0% |
| ! | TTAAAGTATCAACTAGTCCC+TGG | - | chr7_3:66886351-66886370 | Msa1118320:intron | 35.0% |
| !! | GGGACTAGTTGATACTTTAA+AGG | + | chr7_3:66886351-66886370 | Msa1118330:intron | 35.0% |
| TCCATTGCCTTATCAAATTC+AGG | - | chr7_3:66886499-66886518 | Msa1118320:intron | 35.0% | |
| AAGTATGAAGAGGATCAATG+AGG | + | chr7_3:66886519-66886538 | Msa1118330:intron | 35.0% | |
| ACCAATTATCTCAATCGTTG+AGG | + | chr7_3:66886678-66886697 | Msa1118330:intron | 35.0% | |
| CCAATTATCTCAATCGTTGA+GGG | + | chr7_3:66886679-66886698 | Msa1118330:intron | 35.0% | |
| CAATTATCTCAATCGTTGAG+GGG | + | chr7_3:66886680-66886699 | Msa1118330:intron | 35.0% | |
| TAAAAAAGGAAGCTGATGGT+TGG | + | chr7_3:66886803-66886822 | Msa1118330:intron | 35.0% | |
| TTCATATCTCCTGACCAATT+AGG | - | chr7_3:66886832-66886851 | Msa1118320:intron | 35.0% | |
| !! | AAATGGTGTTGATCAGTATG+TGG | + | chr7_3:66886873-66886892 | Msa1118330:intron | 35.0% |
| AAAAGACTTGTGCATGTAGA+AGG | + | chr7_3:66886908-66886927 | Msa1118330:intron | 35.0% | |
| CAACATATTGCATGAACACA+TGG | - | chr7_3:66886952-66886971 | Msa1118320:intron | 35.0% | |
| !! | ATTTTGCTCATCTGGTGTTA+AGG | + | chr7_3:66887054-66887073 | Msa1118330:intron | 35.0% |
| ! | TCAACAGTTGGCCATAATTT+TGG | - | chr7_3:66887176-66887195 | Msa1118320:intron | 35.0% |
| CTCATCATTTGTCTTTCTTC+TGG | - | chr7_3:66887255-66887274 | Msa1118320:intron | 35.0% | |
| TGCAGAGAGAAAAATACCAA+AGG | + | chr7_3:66887376-66887395 | Msa1118330:intron | 35.0% | |
| GCAGAGAGAAAAATACCAAA+GGG | + | chr7_3:66887377-66887396 | Msa1118330:intron | 35.0% | |
| ! | ACATGTGTAGCTTGTGTAAT+TGG | - | chr7_3:66887558-66887577 | Msa1118320:intron | 35.0% |
| GGATTTGCAATGAGTTCCAT+TGG | - | chr7_3:66884043-66884062 | Msa1118320:intron | 40.0% | |
| ! | GATTTGGGATTAGACGGAAT+CGG | - | chr7_3:66884064-66884083 | Msa1118320:intron | 40.0% |
| GGAATCAAAACGGGATTGAT+TGG | - | chr7_3:66884106-66884125 | Msa1118320:intron | 40.0% | |
| !! | ACAATGACAAGCATTGAACG+TGG | + | chr7_3:66884254-66884273 | Msa1118330:CDS | 40.0% |
| ! | GCAGAAATGTCAAGGTTTTG+AGG | + | chr7_3:66884367-66884386 | Msa1118330:CDS | 40.0% |
| CCGCTACCTGCATATTTAAA+TGG | + | chr7_3:66884673-66884692 | Msa1118330:intron | 40.0% | |
| !! | AAGTTTTGGTATGTACTCCC+AGG | + | chr7_3:66884793-66884812 | Msa1118330:intron | 40.0% |
| AAGATGTCCATGAGTTTGTG+AGG | + | chr7_3:66884857-66884876 | Msa1118330:intron | 40.0% | |
| AGATGTCCATGAGTTTGTGA+GGG | + | chr7_3:66884858-66884877 | Msa1118330:intron | 40.0% | |
| GGTGTCTCATTTCTAATGGT+GGG | - | chr7_3:66884946-66884965 | Msa1118320:intron | 40.0% | |
| AGGTGTCTCATTTCTAATGG+TGG | - | chr7_3:66884947-66884966 | Msa1118320:intron | 40.0% | |
| ACCATTAGAAATGAGACACC+TGG | + | chr7_3:66884946-66884965 | Msa1118330:intron | 40.0% | |
| ACCAGGTGTCTCATTTCTAA+TGG | - | chr7_3:66884950-66884969 | Msa1118320:intron | 40.0% | |
| TGAGGGTGATGAGATAAACA+AGG | + | chr7_3:66885017-66885036 | Msa1118330:intron | 40.0% | |
| GAGGGTGATGAGATAAACAA+GGG | + | chr7_3:66885018-66885037 | Msa1118330:intron | 40.0% | |
| TGAGATAAACAAGGGTAGTG+AGG | + | chr7_3:66885026-66885045 | Msa1118330:intron | 40.0% | |
| GAGATAAACAAGGGTAGTGA+GGG | + | chr7_3:66885027-66885046 | Msa1118330:intron | 40.0% | |
| GGTGATGAGTTTAGTGAATC+TGG | + | chr7_3:66885060-66885079 | Msa1118330:CDS | 40.0% | |
| GGTGATGACTTTAGTGAATC+TGG | + | chr7_3:66885102-66885121 | Msa1118330:CDS | 40.0% | |
| CAAATTCAGATCCAGATCCA+AGG | - | chr7_3:66885164-66885183 | Msa1118320:intron | 40.0% | |
| TGGATCTGGATCTGAATTTG+AGG | + | chr7_3:66885164-66885183 | Msa1118330:CDS | 40.0% | |
| ACATGATTCACTGTCTCTTC+TGG | - | chr7_3:66885231-66885250 | Msa1118320:intron | 40.0% | |
| AGAGACAGTGAATCATGTCA+AGG | + | chr7_3:66885233-66885252 | Msa1118330:intron | 40.0% | |
| ACAGTGAATCATGTCAAGGA+GGG | + | chr7_3:66885237-66885256 | Msa1118330:intron | 40.0% | |
| !! | TGTTGATGGTGGATCTATAG+AGG | + | chr7_3:66885272-66885291 | Msa1118330:intron | 40.0% |
| !! | ATGGTGGATCTATAGAGGAT+GGG | + | chr7_3:66885277-66885296 | Msa1118330:intron | 40.0% |
| CCATCTTCACTTACTTCATC+TGG | - | chr7_3:66885387-66885406 | Msa1118320:intron | 40.0% | |
| CCAGATGAAGTAAGTGAAGA+TGG | + | chr7_3:66885384-66885403 | Msa1118330:intron | 40.0% | |
| CCATCAGGAAGTTTGAACTT+TGG | - | chr7_3:66885426-66885445 | Msa1118320:intron | 40.0% | |
| CCAAAGTTCAAACTTCCTGA+TGG | + | chr7_3:66885423-66885442 | Msa1118330:intron | 40.0% | |
| TGACCTAACTGAAAAGTCAC+AGG | - | chr7_3:66885456-66885475 | Msa1118320:intron | 40.0% | |
| TCACAAGACTTACTTTCAGG+TGG | + | chr7_3:66885629-66885648 | Msa1118330:intron | 40.0% | |
| AAACAGAGTGCAAAACTAGG+TGG | + | chr7_3:66885778-66885797 | Msa1118330:intron | 40.0% | |
| AACAGAGTGCAAAACTAGGT+GGG | + | chr7_3:66885779-66885798 | Msa1118330:intron | 40.0% | |
| GCATCTAAGAAGTTATGCAG+AGG | + | chr7_3:66885887-66885906 | Msa1118330:intron | 40.0% | |
| !! | AGACCTTTGATTGGTCTTGA+TGG | + | chr7_3:66886035-66886054 | Msa1118330:intron | 40.0% |
| CAACCATCAAGACCAATCAA+AGG | - | chr7_3:66886041-66886060 | Msa1118320:intron | 40.0% | |
| GGGTCAATTATTAACTGCTG+TGG | + | chr7_3:66886082-66886101 | Msa1118330:intron | 40.0% | |
| TTAACTGCTGTGGGTAAAGA+TGG | + | chr7_3:66886092-66886111 | Msa1118330:intron | 40.0% | |
| AAACAAAGGACTCATGGTCA+TGG | + | chr7_3:66886159-66886178 | Msa1118330:intron | 40.0% | |
| GTTTACTAACCTTCTTCTGG+AGG | + | chr7_3:66886181-66886200 | Msa1118330:intron | 40.0% | |
| TGTTAAGATCCTCCAGAAGA+AGG | - | chr7_3:66886193-66886212 | Msa1118320:intron | 40.0% | |
| TTGATGCAAATGTTGAGCAC+AGG | + | chr7_3:66886377-66886396 | Msa1118330:intron | 40.0% | |
| CACAGTGCCTGAATTTGATA+AGG | + | chr7_3:66886489-66886508 | Msa1118330:intron | 40.0% | |
| GCCTGAATTTGATAAGGCAA+TGG | + | chr7_3:66886495-66886514 | Msa1118330:intron | 40.0% | |
| ! | AGGCAATGGAAAGTATGAAG+AGG | + | chr7_3:66886509-66886528 | Msa1118330:intron | 40.0% |
| ! | TCATACTCAGTGTGATTTGC+AGG | + | chr7_3:66886603-66886622 | Msa1118330:intron | 40.0% |
| GCAGGTAAATAACATGTGTG+AGG | + | chr7_3:66886621-66886640 | Msa1118330:intron | 40.0% | |
| ! | CATGTGTGAGGCTTTTAACA+TGG | + | chr7_3:66886633-66886652 | Msa1118330:intron | 40.0% |
| CCCTCAACGATTGAGATAAT+TGG | - | chr7_3:66886682-66886701 | Msa1118320:intron | 40.0% | |
| TCAGTATGTGGTCAACTTGA+TGG | + | chr7_3:66886885-66886904 | Msa1118330:intron | 40.0% | |
| GTTCAATGAAAAAGCTCCTG+AGG | + | chr7_3:66886978-66886997 | Msa1118330:intron | 40.0% | |
| CAATGAGCAACATAATCCTC+AGG | - | chr7_3:66886997-66887016 | Msa1118320:intron | 40.0% | |
| CTGAGGATTATGTTGCTCAT+TGG | + | chr7_3:66886995-66887014 | Msa1118330:intron | 40.0% | |
| GTGCACCTGAATAATGTGTT+TGG | + | chr7_3:66887027-66887046 | Msa1118330:intron | 40.0% | |
| ATGGGTAATGCATCAACAGT+TGG | - | chr7_3:66887188-66887207 | Msa1118320:intron | 40.0% | |
| CTAACATATGGAGGCTGAAT+GGG | - | chr7_3:66887206-66887225 | Msa1118320:intron | 40.0% | |
| TTCAACCTTCTGCAGTTTGT+AGG | - | chr7_3:66887278-66887297 | Msa1118320:intron | 40.0% | |
| AAACTGCAGAAGGTTGAAGA+AGG | + | chr7_3:66887280-66887299 | Msa1118330:intron | 40.0% | |
| AGAAGGTTGAAGAAGGTAGA+TGG | + | chr7_3:66887287-66887306 | Msa1118330:intron | 40.0% | |
| ATGGAACTGTCAGATGCAAA+AGG | + | chr7_3:66887306-66887325 | Msa1118330:intron | 40.0% | |
| GAGAGAAAAATACCAAAGGG+TGG | + | chr7_3:66887380-66887399 | Msa1118330:intron | 40.0% | |
| AATACCAAAGGGTGGAAACA+AGG | + | chr7_3:66887388-66887407 | Msa1118330:intron | 40.0% | |
| !! | TGATTTGTTCCTTGAGTCTC+AGG | - | chr7_3:66887528-66887547 | Msa1118320:intron | 40.0% |
| TCACAGGCTACACAACAAAA+GGG | + | chr7_3:66887726-66887745 | Msa1118330:CDS | 40.0% | |
| AAAGCTCAAAGTGAGACACT+AGG | + | chr7_3:66887771-66887790 | Msa1118330:CDS | 40.0% | |
| GAACCGACAGATTCGTTTAC+AGG | - | chr7_3:66884127-66884146 | Msa1118320:intron | 45.0% | |
| TGTTCTTCGCCATGGAGATT+TGG | - | chr7_3:66884208-66884227 | Msa1118320:intron | 45.0% | |
| !! | GACAAGCATTGAACGTGGAA+AGG | + | chr7_3:66884259-66884278 | Msa1118330:CDS | 45.0% |
| AAACTTTGATGGAAACGCGC+AGG | + | chr7_3:66884304-66884323 | Msa1118330:CDS | 45.0% | |
| ATGAAACCATGGCGAAGAAG+AGG | + | chr7_3:66884330-66884349 | Msa1118330:CDS | 45.0% | |
| AGGTGAATGTTCCTTTGTGG+TGG | - | chr7_3:66884648-66884667 | Msa1118320:intron | 45.0% | |
| CAGAGGTGAATGTTCCTTTG+TGG | - | chr7_3:66884651-66884670 | Msa1118320:intron | 45.0% | |
| TGGTATGTACTCCCAGGAAA+AGG | + | chr7_3:66884799-66884818 | Msa1118330:intron | 45.0% | |
| TATGGACCCTCACAAACTCA+TGG | - | chr7_3:66884867-66884886 | Msa1118320:intron | 45.0% | |
| TGAGTTTGTGAGGGTCCATA+AGG | + | chr7_3:66884867-66884886 | Msa1118330:intron | 45.0% | |
| GAGTTTGTGAGGGTCCATAA+GGG | + | chr7_3:66884868-66884887 | Msa1118330:intron | 45.0% | |
| !! | GGTGTGGATTGGTTATGATC+AGG | - | chr7_3:66884925-66884944 | Msa1118320:intron | 45.0% |
| !! | TTCTAATGGTGGGTGTGGAT+TGG | - | chr7_3:66884936-66884955 | Msa1118320:intron | 45.0% |
| !! | CTCATTTCTAATGGTGGGTG+TGG | - | chr7_3:66884941-66884960 | Msa1118320:intron | 45.0% |
| ! | AGTGAATCTGGTGATGATGC+TGG | + | chr7_3:66885114-66885133 | Msa1118330:CDS | 45.0% |
| !! | GCTGGTGAAGAAGTTGATGT+AGG | + | chr7_3:66885132-66885151 | Msa1118330:CDS | 45.0% |
| ! | GTTGATGTAGGTTCTGACCT+TGG | + | chr7_3:66885144-66885163 | Msa1118330:CDS | 45.0% |
| GACAGTGAATCATGTCAAGG+AGG | + | chr7_3:66885236-66885255 | Msa1118330:intron | 45.0% | |
| !! | GATGGTGGATCTATAGAGGA+TGG | + | chr7_3:66885276-66885295 | Msa1118330:intron | 45.0% |
| ! | TGGTGGATCTATAGAGGATG+GGG | + | chr7_3:66885278-66885297 | Msa1118330:intron | 45.0% |
| ! | GAGCCTGTGACTTTTCAGTT+AGG | + | chr7_3:66885450-66885469 | Msa1118330:intron | 45.0% |
| ACAGAGTGCAAAACTAGGTG+GGG | + | chr7_3:66885780-66885799 | Msa1118330:intron | 45.0% | |
| GGAGATGATTGAGGGAAGTA+TGG | + | chr7_3:66885851-66885870 | Msa1118330:intron | 45.0% | |
| ! | GATGATTGAGGGAAGTATGG+TGG | + | chr7_3:66885854-66885873 | Msa1118330:intron | 45.0% |
| ! | TGGATGGGCCAGTATTTTCT+AGG | + | chr7_3:66885964-66885983 | Msa1118330:intron | 45.0% |
| CATGTAAGATAGCCTTTGCG+AGG | + | chr7_3:66886006-66886025 | Msa1118330:intron | 45.0% | |
| AGGCTGAAACAAAGGACTCA+TGG | + | chr7_3:66886153-66886172 | Msa1118330:intron | 45.0% | |
| GCTTCTTTCAATGCTTCACC+AGG | - | chr7_3:66886445-66886464 | Msa1118320:intron | 45.0% | |
| AGAGGATCAATGAGGAAGCA+TGG | + | chr7_3:66886527-66886546 | Msa1118330:intron | 45.0% | |
| ! | GAGGATCAATGAGGAAGCAT+GGG | + | chr7_3:66886528-66886547 | Msa1118330:intron | 45.0% |
| CTGATGGTTGGACTCCTAAT+TGG | + | chr7_3:66886815-66886834 | Msa1118330:intron | 45.0% | |
| AGACTTGTGCATGTAGAAGG+TGG | + | chr7_3:66886911-66886930 | Msa1118330:intron | 45.0% | |
| TGTAGAAGGTGGCAGTTAAC+TGG | + | chr7_3:66886922-66886941 | Msa1118330:intron | 45.0% | |
| CCTAACATATGGAGGCTGAA+TGG | - | chr7_3:66887207-66887226 | Msa1118320:intron | 45.0% | |
| CCATTCAGCCTCCATATGTT+AGG | + | chr7_3:66887204-66887223 | Msa1118330:intron | 45.0% | |
| TTCAGCCTCCATATGTTAGG+AGG | + | chr7_3:66887207-66887226 | Msa1118330:intron | 45.0% | |
| CATATGTTAGGAGGACACCA+GGG | + | chr7_3:66887216-66887235 | Msa1118330:intron | 45.0% | |
| ! | GTCTTTCTTCTGGCCTTCTT+GGG | - | chr7_3:66887245-66887264 | Msa1118320:intron | 45.0% |
| ! | TGTCTTTCTTCTGGCCTTCT+TGG | - | chr7_3:66887246-66887265 | Msa1118320:intron | 45.0% |
| ATGAGCCTACAAACTGCAGA+AGG | + | chr7_3:66887270-66887289 | Msa1118330:intron | 45.0% | |
| ACACAACAGAAGAACCTGCA+AGG | + | chr7_3:66887343-66887362 | Msa1118330:intron | 45.0% | |
| CACAACAGAAGAACCTGCAA+GGG | + | chr7_3:66887344-66887363 | Msa1118330:intron | 45.0% | |
| ACAACAGAAGAACCTGCAAG+GGG | + | chr7_3:66887345-66887364 | Msa1118330:intron | 45.0% | |
| ! | TTCACCTTGTTTCCACCCTT+TGG | - | chr7_3:66887395-66887414 | Msa1118320:intron | 45.0% |
| ! | GCAGAAGTAGCTTGTCTAAC+AGG | - | chr7_3:66887594-66887613 | Msa1118320:intron | 45.0% |
| GCTGCTTCTGTTACACATGT+TGG | + | chr7_3:66887621-66887640 | Msa1118330:CDS | 45.0% | |
| !! | AGATGCAGCCTGTTGATTTC+CGG | - | chr7_3:66887703-66887722 | Msa1118320:intron | 45.0% |
| GTCACAGGCTACACAACAAA+AGG | + | chr7_3:66887725-66887744 | Msa1118330:CDS | 45.0% | |
| !! | ACAACAAAAGGGTGCCAGAA+GGG | + | chr7_3:66887737-66887756 | Msa1118330:CDS | 45.0% |
| ! | TTTTCTCTTCCTTCCCCTTC+TGG | - | chr7_3:66887754-66887773 | Msa1118320:intron | 45.0% |
| TCCATGGCGAAGAACAACAG+TGG | + | chr7_3:66884212-66884231 | Msa1118330:exon | 50.0% | |
| TCCACTGTTGTTCTTCGCCA+TGG | - | chr7_3:66884216-66884235 | Msa1118320:intron | 50.0% | |
| GGCGAAGAACAACAGTGGAA+AGG | + | chr7_3:66884217-66884236 | Msa1118330:CDS | 50.0% | |
| CAGTGGAAAGGCGAAGAAGA+AGG | + | chr7_3:66884229-66884248 | Msa1118330:CDS | 50.0% | |
| ATCACTCCTCTTCTTCGCCA+TGG | - | chr7_3:66884339-66884358 | Msa1118320:intron | 50.0% | |
| ATGGCGAAGAAGAGGAGTGA+TGG | + | chr7_3:66884338-66884357 | Msa1118330:CDS | 50.0% | |
| GGAAACGCGCAGAAATGTCA+AGG | + | chr7_3:66884359-66884378 | Msa1118330:CDS | 50.0% | |
| ACCTGATGGTACTTGGGACA+TGG | + | chr7_3:66884708-66884727 | Msa1118330:intron | 50.0% | |
| TCCATGTCCCAAGTACCATC+AGG | - | chr7_3:66884712-66884731 | Msa1118320:intron | 50.0% | |
| CATATCAGCATAAGGGGACC+AGG | - | chr7_3:66884967-66884986 | Msa1118320:intron | 50.0% | |
| AAGGGTAGTGAGGGTGATGA+GGG | + | chr7_3:66885036-66885055 | Msa1118330:intron | 50.0% | |
| ! | GTAGGTTCTGACCTTGGATC+TGG | + | chr7_3:66885150-66885169 | Msa1118330:CDS | 50.0% |
| ! | AGGCACTGCAGACCTTTGAT+TGG | + | chr7_3:66886026-66886045 | Msa1118330:intron | 50.0% |
| ! | GATCAATGAGGAAGCATGGG+AGG | + | chr7_3:66886531-66886550 | Msa1118330:intron | 50.0% |
| GAAATGTCCAAACACCCACC+TGG | + | chr7_3:66886553-66886572 | Msa1118330:intron | 50.0% | |
| GGTTGGACTCCTAATTGGTC+AGG | + | chr7_3:66886820-66886839 | Msa1118330:intron | 50.0% | |
| GGTGTCCTCCTAACATATGG+AGG | - | chr7_3:66887215-66887234 | Msa1118320:intron | 50.0% | |
| CCTGGTGTCCTCCTAACATA+TGG | - | chr7_3:66887218-66887237 | Msa1118320:intron | 50.0% | |
| CCATATGTTAGGAGGACACC+AGG | + | chr7_3:66887215-66887234 | Msa1118330:intron | 50.0% | |
| GTGACACATCCTGAGACTCA+AGG | + | chr7_3:66887516-66887535 | Msa1118330:CDS | 50.0% | |
| ! | GACCAAGCACTGCATCTATG+AGG | + | chr7_3:66887643-66887662 | Msa1118330:CDS | 50.0% |
| TGCCTCATAGATGCAGTGCT+TGG | - | chr7_3:66887648-66887667 | Msa1118320:intron | 50.0% | |
| GGCAAGCTAAGAGTCAAGCT+AGG | + | chr7_3:66887664-66887683 | Msa1118330:CDS | 50.0% | |
| ! | GTTGATTTCCGGTTCCTGCT+TGG | - | chr7_3:66887692-66887711 | Msa1118320:intron | 50.0% |
| AGCAGGAACCGGAAATCAAC+AGG | + | chr7_3:66887692-66887711 | Msa1118330:CDS | 50.0% | |
| !! | CACAACAAAAGGGTGCCAGA+AGG | + | chr7_3:66887736-66887755 | Msa1118330:CDS | 50.0% |
| !! | CAACAAAAGGGTGCCAGAAG+GGG | + | chr7_3:66887738-66887757 | Msa1118330:CDS | 50.0% |
| ! | ACGTGGAAAGGCGCAGAAGA+AGG | + | chr7_3:66884271-66884290 | Msa1118330:CDS | 55.0% |
| CGCGCAGGAGAATGAAACCA+TGG | + | chr7_3:66884319-66884338 | Msa1118330:CDS | 55.0% | |
| !! | ATATGCAGGTAGCGGGTCAG+AGG | - | chr7_3:66884668-66884687 | Msa1118320:intron | 55.0% |
| ! | CACCAGCTAGGCCTTTTCCT+GGG | - | chr7_3:66884813-66884832 | Msa1118320:intron | 55.0% |
| CAGGAAAAGGCCTAGCTGGT+GGG | + | chr7_3:66884812-66884831 | Msa1118330:intron | 55.0% | |
| ACTGTCTAAGCCCACCAGCT+AGG | - | chr7_3:66884825-66884844 | Msa1118320:intron | 55.0% | |
| !! | AGCTGGTGGGCTTAGACAGT+TGG | + | chr7_3:66884825-66884844 | Msa1118330:intron | 55.0% |
| !! | GCTGGTGGGCTTAGACAGTT+GGG | + | chr7_3:66884826-66884845 | Msa1118330:intron | 55.0% |
| CAAGGGTAGTGAGGGTGATG+AGG | + | chr7_3:66885035-66885054 | Msa1118330:intron | 55.0% | |
| GTCACAGGCTCATCACCATC+AGG | - | chr7_3:66885441-66885460 | Msa1118320:intron | 55.0% | |
| CCACATACCAGGTGGGTGTT+TGG | - | chr7_3:66886563-66886582 | Msa1118320:intron | 55.0% | |
| CCAAACACCCACCTGGTATG+TGG | + | chr7_3:66886560-66886579 | Msa1118330:intron | 55.0% | |
| TGCATCTGCTTTCCCCTTGC+AGG | - | chr7_3:66887360-66887379 | Msa1118320:intron | 55.0% | |
| AGTCAAGCTAGGAGCCAAGC+AGG | + | chr7_3:66887675-66887694 | Msa1118330:CDS | 55.0% | |
| ACAGGCTGCATCTGTGTCAC+AGG | + | chr7_3:66887710-66887729 | Msa1118330:CDS | 55.0% | |
| !! | AAAAGGGTGCCAGAAGGGGA+AGG | + | chr7_3:66887742-66887761 | Msa1118330:CDS | 55.0% |
| CTCCCAGGAAAAGGCCTAGC+TGG | + | chr7_3:66884808-66884827 | Msa1118330:intron | 60.0% | |
| ! | CCACCAGCTAGGCCTTTTCC+TGG | - | chr7_3:66884814-66884833 | Msa1118320:intron | 60.0% |
| CCAGGAAAAGGCCTAGCTGG+TGG | + | chr7_3:66884811-66884830 | Msa1118330:intron | 60.0% | |
| GGTAGTGAGGGTGATGAGGG+TGG | + | chr7_3:66885039-66885058 | Msa1118330:intron | 60.0% | |
| AGGTCTGCAGTGCCTCGCAA+AGG | - | chr7_3:66886021-66886040 | Msa1118320:intron | 60.0% | |
| ACCCACCTGGTATGTGGAGC+AGG | + | chr7_3:66886566-66886585 | Msa1118330:intron | 60.0% | |
| CCCTGCTCCACATACCAGGT+GGG | - | chr7_3:66886570-66886589 | Msa1118320:intron | 60.0% | |
| CCCACCTGGTATGTGGAGCA+GGG | + | chr7_3:66886567-66886586 | Msa1118330:intron | 60.0% | |
| TGTGCCCTGCTCCACATACC+AGG | - | chr7_3:66886574-66886593 | Msa1118320:intron | 60.0% | |
| GACACCAGGGAGACCCAAGA+AGG | + | chr7_3:66887229-66887248 | Msa1118330:intron | 60.0% | |
| GCTAGGAGCCAAGCAGGAAC+CGG | + | chr7_3:66887681-66887700 | Msa1118330:CDS | 60.0% | |
| GCCCTGCTCCACATACCAGG+TGG | - | chr7_3:66886571-66886590 | Msa1118320:intron | 65.0% | |
| ! | CTGGCCTTCTTGGGTCTCCC+TGG | - | chr7_3:66887236-66887255 | Msa1118320:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 66883997 | 66887818 | 66883997 | ID=Msa1118330;Name=Msa1118330 |
| chr7_3 | mRNA | 66883997 | 66887818 | 66883997 | ID=Msa1118330-mRNA-1;Parent=Msa1118330;Name=Msa1118330-mRNA-1;_AED=0.34;_eAED=0.34;_QI=218|0|0.33|0.33|1|1|3|0|228 |
| chr7_3 | exon | 66883997 | 66884390 | 66883997 | ID=Msa1118330-mRNA-1:exon:16284;Parent=Msa1118330-mRNA-1 |
| chr7_3 | exon | 66885044 | 66885239 | 66885044 | ID=Msa1118330-mRNA-1:exon:16285;Parent=Msa1118330-mRNA-1 |
| chr7_3 | exon | 66887504 | 66887818 | 66887504 | ID=Msa1118330-mRNA-1:exon:16286;Parent=Msa1118330-mRNA-1 |
| chr7_3 | five_prime_UTR | 66883997 | 66884214 | 66883997 | ID=Msa1118330-mRNA-1:five_prime_utr;Parent=Msa1118330-mRNA-1 |
| chr7_3 | CDS | 66884215 | 66884390 | 66884215 | ID=Msa1118330-mRNA-1:cds;Parent=Msa1118330-mRNA-1 |
| chr7_3 | CDS | 66885044 | 66885239 | 66885044 | ID=Msa1118330-mRNA-1:cds;Parent=Msa1118330-mRNA-1 |
| chr7_3 | CDS | 66887504 | 66887818 | 66887504 | ID=Msa1118330-mRNA-1:cds;Parent=Msa1118330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
