Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009200 | RHN44451.1 | 86.239 | 109 | 15 | 0 | 2 | 110 | 208 | 316 | 9.20e-60 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009200 | A0A396GW60 | 86.239 | 109 | 15 | 0 | 2 | 110 | 208 | 316 | 4.40e-60 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014790 | Msa1009200 | 0.824365 | 8.396864e-54 | -8.615850e-47 |
| Msa0072830 | Msa1009200 | 0.805430 | 1.340125e-49 | -8.615850e-47 |
| Msa0072860 | Msa1009200 | 0.807325 | 5.341833e-50 | -8.615850e-47 |
| Msa0104360 | Msa1009200 | 0.837132 | 6.224700e-57 | -8.615850e-47 |
| Msa0104390 | Msa1009200 | 0.805162 | 1.524783e-49 | -8.615850e-47 |
| Msa0108950 | Msa1009200 | 0.810063 | 1.388537e-50 | -8.615850e-47 |
| Msa0108970 | Msa1009200 | 0.810842 | 9.428695e-51 | -8.615850e-47 |
| Msa0617370 | Msa1009200 | 0.803083 | 4.129186e-49 | -8.615850e-47 |
| Msa0660880 | Msa1009200 | -0.802894 | 4.517626e-49 | -8.615850e-47 |
| Msa0669990 | Msa1009200 | 0.811679 | 6.206687e-51 | -8.615850e-47 |
| Msa0672810 | Msa1009200 | 0.812734 | 3.652927e-51 | -8.615850e-47 |
| Msa0672850 | Msa1009200 | 0.817646 | 2.959480e-52 | -8.615850e-47 |
| Msa0752580 | Msa1009200 | 0.840975 | 6.288821e-58 | -8.615850e-47 |
| Msa0754500 | Msa1009200 | 0.831354 | 1.751092e-55 | -8.615850e-47 |
| Msa0763280 | Msa1009200 | 0.821962 | 3.053765e-53 | -8.615850e-47 |
| Msa0799290 | Msa1009200 | -0.801108 | 1.051708e-48 | -8.615850e-47 |
| Msa0811000 | Msa1009200 | 0.816295 | 5.953139e-52 | -8.615850e-47 |
| Msa0830900 | Msa1009200 | 0.836369 | 9.744730e-57 | -8.615850e-47 |
| Msa0835510 | Msa1009200 | 0.816097 | 6.590985e-52 | -8.615850e-47 |
| Msa0837510 | Msa1009200 | -0.803058 | 4.177858e-49 | -8.615850e-47 |
| Msa0151860 | Msa1009200 | 0.812403 | 4.314091e-51 | -8.615850e-47 |
| Msa0151870 | Msa1009200 | 0.810561 | 1.084293e-50 | -8.615850e-47 |
| Msa0153440 | Msa1009200 | 0.830926 | 2.230488e-55 | -8.615850e-47 |
| Msa0180290 | Msa1009200 | 0.813965 | 1.959966e-51 | -8.615850e-47 |
| Msa0193760 | Msa1009200 | 0.810290 | 1.240396e-50 | -8.615850e-47 |
| Msa0211670 | Msa1009200 | 0.826001 | 3.445826e-54 | -8.615850e-47 |
| Msa0232860 | Msa1009200 | 0.833264 | 5.893893e-56 | -8.615850e-47 |
| Msa0235550 | Msa1009200 | 0.808904 | 2.462887e-50 | -8.615850e-47 |
| Msa0389050 | Msa1009200 | 0.821913 | 3.134965e-53 | -8.615850e-47 |
| Msa0409820 | Msa1009200 | 0.802174 | 6.358091e-49 | -8.615850e-47 |
| Msa0414070 | Msa1009200 | 0.834684 | 2.599779e-56 | -8.615850e-47 |
| Msa0437330 | Msa1009200 | 0.808234 | 3.423591e-50 | -8.615850e-47 |
| Msa0439700 | Msa1009200 | 0.802821 | 4.678025e-49 | -8.615850e-47 |
| Msa0455260 | Msa1009200 | 0.805678 | 1.188469e-49 | -8.615850e-47 |
| Msa1008340 | Msa1009200 | 0.805365 | 1.382703e-49 | -8.615850e-47 |
| Msa1009170 | Msa1009200 | 0.846272 | 2.410526e-59 | -8.615850e-47 |
| Msa1009200 | Msa1009220 | 0.856163 | 3.873588e-62 | -8.615850e-47 |
| Msa1009200 | Msa1026610 | 0.807954 | 3.927563e-50 | -8.615850e-47 |
| Msa1009200 | Msa1048490 | 0.807224 | 5.610364e-50 | -8.615850e-47 |
| Msa1009200 | Msa1049950 | 0.806318 | 8.719338e-50 | -8.615850e-47 |
| Msa1009200 | Msa1050480 | 0.831231 | 1.876674e-55 | -8.615850e-47 |
| Msa1009200 | Msa1050500 | 0.818711 | 1.699463e-52 | -8.615850e-47 |
| Msa1009200 | Msa1073500 | 0.815576 | 8.614644e-52 | -8.615850e-47 |
| Msa1009200 | Msa1081700 | 0.812226 | 4.716838e-51 | -8.615850e-47 |
| Msa1009200 | Msa1098340 | 0.834242 | 3.357065e-56 | -8.615850e-47 |
| Msa1009200 | Msa1098350 | 0.822556 | 2.223819e-53 | -8.615850e-47 |
| Msa1009200 | Msa1126170 | 0.805304 | 1.424035e-49 | -8.615850e-47 |
| Msa1009200 | Msa1130350 | 0.818285 | 2.123002e-52 | -8.615850e-47 |
| Msa1009200 | Msa1130630 | 0.809795 | 1.585849e-50 | -8.615850e-47 |
| Msa1009200 | Msa1135660 | 0.826550 | 2.550374e-54 | -8.615850e-47 |
| Msa1009200 | Msa1138450 | 0.806767 | 7.008773e-50 | -8.615850e-47 |
| Msa1009200 | Msa1138480 | 0.842203 | 2.985335e-58 | -8.615850e-47 |
| Msa1009200 | Msa1138490 | 0.818010 | 2.449654e-52 | -8.615850e-47 |
| Msa1009200 | Msa1139240 | 0.822147 | 2.767327e-53 | -8.615850e-47 |
| Msa1009200 | Msa1151550 | 0.816711 | 4.802380e-52 | -8.615850e-47 |
| Msa1009200 | Msa1182830 | 0.802703 | 4.947476e-49 | -8.615850e-47 |
| Msa1009200 | Msa1191390 | 0.810453 | 1.144263e-50 | -8.615850e-47 |
| Msa1009200 | Msa1199750 | 0.801955 | 7.051453e-49 | -8.615850e-47 |
| Msa1009200 | Msa1204430 | 0.843308 | 1.517398e-58 | -8.615850e-47 |
| Msa1009200 | Msa1237260 | 0.818490 | 1.908122e-52 | -8.615850e-47 |
| Msa1009200 | Msa1246560 | 0.872419 | 3.227692e-67 | -8.615850e-47 |
| Msa1009200 | Msa1258280 | 0.814741 | 1.319972e-51 | -8.615850e-47 |
| Msa1009200 | Msa1279310 | 0.809324 | 2.001739e-50 | -8.615850e-47 |
| Msa1009200 | Msa1279330 | 0.801083 | 1.064146e-48 | -8.615850e-47 |
| Msa1009200 | Msa1279850 | 0.837617 | 4.675786e-57 | -8.615850e-47 |
| Msa1009200 | Msa1279860 | 0.843279 | 1.545398e-58 | -8.615850e-47 |
| Msa1009200 | Msa1279870 | 0.841826 | 3.754627e-58 | -8.615850e-47 |
| Msa1009200 | Msa1285820 | 0.823751 | 1.169887e-53 | -8.615850e-47 |
| Msa1009200 | Msa1285830 | 0.815550 | 8.728672e-52 | -8.615850e-47 |
| Msa1009200 | Msa1287560 | 0.814282 | 1.668134e-51 | -8.615850e-47 |
| Msa1009200 | Msa1296650 | 0.828394 | 9.212995e-55 | -8.615850e-47 |
| Msa1009200 | Msa1317710 | 0.809271 | 2.055147e-50 | -8.615850e-47 |
| Msa1009200 | Msa1328600 | 0.817012 | 4.111059e-52 | -8.615850e-47 |
| Msa1009200 | Msa1365120 | 0.805609 | 1.228772e-49 | -8.615850e-47 |
| Msa1009200 | Msa1427810 | 0.816343 | 5.807347e-52 | -8.615850e-47 |
| Msa1009200 | Msa1441200 | 0.816492 | 5.377129e-52 | -8.615850e-47 |
| Msa1009200 | Msa1459170 | 0.805500 | 1.295380e-49 | -8.615850e-47 |
| Msa1009200 | Msa1460310 | -0.822888 | 1.861689e-53 | -8.615850e-47 |
| Msa0254190 | Msa1009200 | 0.813932 | 1.992304e-51 | -8.615850e-47 |
| Msa0264940 | Msa1009200 | -0.816053 | 6.743325e-52 | -8.615850e-47 |
| Msa0274520 | Msa1009200 | 0.801546 | 8.555092e-49 | -8.615850e-47 |
| Msa0302990 | Msa1009200 | -0.822823 | 1.927116e-53 | -8.615850e-47 |
| Msa0363440 | Msa1009200 | 0.830059 | 3.633423e-55 | -8.615850e-47 |
| Msa0501470 | Msa1009200 | 0.812684 | 3.745220e-51 | -8.615850e-47 |
| Msa0533460 | Msa1009200 | 0.804861 | 1.763051e-49 | -8.615850e-47 |
| Msa0563140 | Msa1009200 | 0.818706 | 1.704181e-52 | -8.615850e-47 |
| Msa0568120 | Msa1009200 | 0.805677 | 1.189377e-49 | -8.615850e-47 |
| Msa0589610 | Msa1009200 | 0.802060 | 6.710851e-49 | -8.615850e-47 |
| Msa0600820 | Msa1009200 | 0.814789 | 1.288390e-51 | -8.615850e-47 |
| Msa0849130 | Msa1009200 | 0.808354 | 3.227288e-50 | -8.615850e-47 |
| Msa0853500 | Msa1009200 | 0.802611 | 5.167043e-49 | -8.615850e-47 |
| Msa0862020 | Msa1009200 | 0.831597 | 1.524991e-55 | -8.615850e-47 |
| Msa0883350 | Msa1009200 | 0.811231 | 7.762730e-51 | -8.615850e-47 |
| Msa0883390 | Msa1009200 | 0.806027 | 1.004023e-49 | -8.615850e-47 |
| Msa0883450 | Msa1009200 | 0.813365 | 2.655573e-51 | -8.615850e-47 |
| Msa0883660 | Msa1009200 | 0.802699 | 4.957269e-49 | -8.615850e-47 |
| Msa0929400 | Msa1009200 | 0.802893 | 4.519907e-49 | -8.615850e-47 |
| Msa0950410 | Msa1009200 | 0.806396 | 8.395281e-50 | -8.615850e-47 |
| Msa0951720 | Msa1009200 | 0.808742 | 2.667132e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009200 | MtrunA17_Chr7g0219581 | 86.239 | 109 | 15 | 0 | 2 | 110 | 208 | 316 | 8.46e-64 | 196 |
| Msa1009200 | MtrunA17_Chr7g0219601 | 87.156 | 109 | 14 | 0 | 2 | 110 | 768 | 876 | 1.18e-59 | 196 |
| Msa1009200 | MtrunA17_Chr7g0219651 | 80.374 | 107 | 18 | 1 | 2 | 108 | 773 | 876 | 1.31e-51 | 174 |
| Msa1009200 | MtrunA17_Chr7g0219651 | 66.055 | 109 | 28 | 1 | 2 | 110 | 1769 | 1868 | 3.84e-41 | 144 |
| Msa1009200 | MtrunA17_Chr4g0025961 | 67.890 | 109 | 35 | 0 | 2 | 110 | 777 | 885 | 6.47e-45 | 154 |
| Msa1009200 | MtrunA17_Chr7g0219571 | 66.055 | 109 | 28 | 1 | 2 | 110 | 784 | 883 | 3.97e-41 | 144 |
| Msa1009200 | MtrunA17_Chr7g0219611 | 58.716 | 109 | 31 | 1 | 2 | 110 | 764 | 858 | 6.90e-35 | 126 |
| Msa1009200 | MtrunA17_Chr7g0219621 | 79.545 | 44 | 9 | 0 | 2 | 45 | 175 | 218 | 1.87e-17 | 74.3 |
| Msa1009200 | MtrunA17_Chr7g0219671 | 42.593 | 108 | 52 | 2 | 2 | 99 | 782 | 889 | 2.19e-15 | 70.5 |
| Msa1009200 | MtrunA17_Chr7g0219781 | 44.037 | 109 | 49 | 3 | 2 | 99 | 785 | 892 | 1.08e-14 | 68.6 |
| Msa1009200 | MtrunA17_Chr7g0219721 | 39.815 | 108 | 54 | 3 | 2 | 99 | 782 | 888 | 1.16e-13 | 65.5 |
| Msa1009200 | MtrunA17_Chr7g0219691 | 38.889 | 108 | 55 | 3 | 2 | 99 | 782 | 888 | 1.32e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGATGGCATGCATAAA+AGG | 0.276580 | 7_1:+10174330 | Msa1009200:CDS |
| TTGTGCTCTCCTTAAAAGTA+TGG | 0.295090 | 7_1:-10174410 | None:intergenic |
| CCCTCAATGAGTCAGGTGGC+TGG | 0.404091 | 7_1:+10174243 | Msa1009200:CDS |
| CTCAATGAGTCAGGTGGCTG+GGG | 0.408599 | 7_1:+10174245 | Msa1009200:CDS |
| CCTCAATGAGTCAGGTGGCT+GGG | 0.414908 | 7_1:+10174244 | Msa1009200:CDS |
| TTAAGTTGTTTGCATGATGA+TGG | 0.446819 | 7_1:+10174210 | Msa1009200:CDS |
| TCGCAATCTATGAGTGATGA+AGG | 0.495095 | 7_1:+10174363 | Msa1009200:CDS |
| TCAACGACCCTCAATGAGTC+AGG | 0.502229 | 7_1:+10174236 | Msa1009200:CDS |
| CCAGCCACCTGACTCATTGA+GGG | 0.509203 | 7_1:-10174243 | None:intergenic |
| CCCAGCCACCTGACTCATTG+AGG | 0.509509 | 7_1:-10174244 | None:intergenic |
| AAAGTTTGCGTTGCAGTTGG+TGG | 0.516032 | 7_1:+10174272 | Msa1009200:CDS |
| TTTAAAGTTTGCGTTGCAGT+TGG | 0.529912 | 7_1:+10174269 | Msa1009200:CDS |
| TGTGCTCTCCTTAAAAGTAT+GGG | 0.561145 | 7_1:-10174409 | None:intergenic |
| TCATAGATTGCGAGAACCGT+AGG | 0.562982 | 7_1:-10174353 | None:intergenic |
| TCAATGAGTCAGGTGGCTGG+GGG | 0.573752 | 7_1:+10174246 | Msa1009200:CDS |
| CGCAATCTATGAGTGATGAA+GGG | 0.599094 | 7_1:+10174364 | Msa1009200:CDS |
| TGGCATGCATAAAAGGCCTA+CGG | 0.633322 | 7_1:+10174337 | Msa1009200:CDS |
| GGTGAGTGAGGAAGATAGCG+AGG | 0.639408 | 7_1:+10174293 | Msa1009200:CDS |
| GTTGCAGTTGGTGGTGAGTG+AGG | 0.645427 | 7_1:+10174281 | Msa1009200:CDS |
| TCTATGAGTGATGAAGGGAG+TGG | 0.678075 | 7_1:+10174369 | Msa1009200:CDS |
| ACGACCCTCAATGAGTCAGG+TGG | 0.687561 | 7_1:+10174239 | Msa1009200:CDS |
| AGGAGAGCACAATCTCAGCG+AGG | 0.764471 | 7_1:+10174421 | Msa1009200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGCAAATATATATTATT+GGG | - | chr7_1:10171599-10171618 | None:intergenic | 10.0% |
| !! | TATAAGCAAATATATATTAT+TGG | - | chr7_1:10171600-10171619 | None:intergenic | 10.0% |
| !!! | ATTTTATTATAGATATTGAG+AGG | - | chr7_1:10171789-10171808 | None:intergenic | 15.0% |
| !!! | GATTTTTATAAATGATATCA+TGG | + | chr7_1:10172946-10172965 | Msa1009200:intron | 15.0% |
| !!! | AAACTTTCTATCATTTTAAT+AGG | - | chr7_1:10173343-10173362 | None:intergenic | 15.0% |
| !! | AAAATTATATTTCCTTCGTA+TGG | + | chr7_1:10171627-10171646 | Msa1009200:intron | 20.0% |
| !!! | TGTGTAAATTGTTTTGTTTA+TGG | - | chr7_1:10171928-10171947 | None:intergenic | 20.0% |
| !!! | CCTTATTATGCTTTTATTAA+CGG | + | chr7_1:10172452-10172471 | Msa1009200:intron | 20.0% |
| !!! | CTTATTATGCTTTTATTAAC+GGG | + | chr7_1:10172453-10172472 | Msa1009200:intron | 20.0% |
| !!! | TGATTCTTCTTTTACTTATA+TGG | + | chr7_1:10172862-10172881 | Msa1009200:intron | 20.0% |
| !!! | TTTTGAGATGATAGTATATT+GGG | - | chr7_1:10173202-10173221 | None:intergenic | 20.0% |
| !!! | TTTTTGAGATGATAGTATAT+TGG | - | chr7_1:10173203-10173222 | None:intergenic | 20.0% |
| !! | TTAAAATGATAGAAAGTTTG+TGG | + | chr7_1:10173344-10173363 | Msa1009200:intron | 20.0% |
| !! | ATTTTATGCAATGAACCTAA+AGG | + | chr7_1:10171561-10171580 | Msa1009200:intron | 25.0% |
| !! | TTTTATGCAATGAACCTAAA+GGG | + | chr7_1:10171562-10171581 | Msa1009200:intron | 25.0% |
| ! | ATAAATTGAAAACCATACGA+AGG | - | chr7_1:10171642-10171661 | None:intergenic | 25.0% |
| ! | TATAAAACATTACTTGAGAC+TGG | - | chr7_1:10171750-10171769 | None:intergenic | 25.0% |
| ! | TATTATAGATATTGAGAGGT+AGG | - | chr7_1:10171785-10171804 | None:intergenic | 25.0% |
| ! | TAGCTAAATTGTAATCTAGA+GGG | - | chr7_1:10171986-10172005 | None:intergenic | 25.0% |
| ! | ATAGCTAAATTGTAATCTAG+AGG | - | chr7_1:10171987-10172006 | None:intergenic | 25.0% |
| ! | TACAATTTAGCTATCAATTG+CGG | + | chr7_1:10171993-10172012 | Msa1009200:intron | 25.0% |
| !!! | CAAAGTTTTGATAAGAAGTT+GGG | - | chr7_1:10172250-10172269 | None:intergenic | 25.0% |
| !!! | TCAAAGTTTTGATAAGAAGT+TGG | - | chr7_1:10172251-10172270 | None:intergenic | 25.0% |
| !! | GATATGTTTAACTTCTCATT+TGG | - | chr7_1:10172401-10172420 | None:intergenic | 25.0% |
| !!! | ATAAGGATTTGATTGGTTTA+TGG | - | chr7_1:10172438-10172457 | None:intergenic | 25.0% |
| ! | AAGCATAATAAGGATTTGAT+TGG | - | chr7_1:10172445-10172464 | None:intergenic | 25.0% |
| !! | CCGTTAATAAAAGCATAATA+AGG | - | chr7_1:10172455-10172474 | None:intergenic | 25.0% |
| ! | TTTGTGTAATAGAGAAAAGA+AGG | - | chr7_1:10172497-10172516 | None:intergenic | 25.0% |
| !! | CTTCTTTTACTTATATGGTA+AGG | + | chr7_1:10172867-10172886 | Msa1009200:intron | 25.0% |
| !!! | TAAGGATTATGTTGTTTCTA+TGG | + | chr7_1:10173024-10173043 | Msa1009200:intron | 25.0% |
| !!! | GAATAATAGTTCTAGTTAGA+AGG | + | chr7_1:10173299-10173318 | Msa1009200:intron | 25.0% |
| !! | TTTGGAATATTATTGCAAGT+TGG | + | chr7_1:10174185-10174204 | Msa1009200:intron | 25.0% |
| !! | AAAAGATGTTCTTTTGTACT+TGG | - | chr7_1:10174447-10174466 | None:intergenic | 25.0% |
| AAAACATTGTGTTCTCTGAT+TGG | + | chr7_1:10171517-10171536 | Msa1009200:intron | 30.0% | |
| CAATTAGGATCACATAATTG+TGG | - | chr7_1:10171689-10171708 | None:intergenic | 30.0% | |
| AATGGTCAAATGATTTCCTT+GGG | - | chr7_1:10171715-10171734 | None:intergenic | 30.0% | |
| AAATGGTCAAATGATTTCCT+TGG | - | chr7_1:10171716-10171735 | None:intergenic | 30.0% | |
| ! | AGTTGTTGTTGTTGAGATTT+GGG | - | chr7_1:10171838-10171857 | None:intergenic | 30.0% |
| ! | AAGTTGTTGTTGTTGAGATT+TGG | - | chr7_1:10171839-10171858 | None:intergenic | 30.0% |
| !!! | TAGGTGATGTTTTAAGAGAT+GGG | - | chr7_1:10172112-10172131 | None:intergenic | 30.0% |
| TGGAATTTGGGTATTTGAAA+GGG | - | chr7_1:10172138-10172157 | None:intergenic | 30.0% | |
| ATGGAATTTGGGTATTTGAA+AGG | - | chr7_1:10172139-10172158 | None:intergenic | 30.0% | |
| AAGAAGTTGGGTAAAAATGA+AGG | - | chr7_1:10172238-10172257 | None:intergenic | 30.0% | |
| TTTGACAGAGAAAATTGCAT+TGG | - | chr7_1:10172279-10172298 | None:intergenic | 30.0% | |
| !! | TGAAGATTTTAAGAAGGGTA+AGG | - | chr7_1:10172313-10172332 | None:intergenic | 30.0% |
| !! | AGGGTTGAAGATTTTAAGAA+GGG | - | chr7_1:10172318-10172337 | None:intergenic | 30.0% |
| !! | AAGGGTTGAAGATTTTAAGA+AGG | - | chr7_1:10172319-10172338 | None:intergenic | 30.0% |
| ! | GTTTAACTTCTCATTTGGTT+TGG | - | chr7_1:10172396-10172415 | None:intergenic | 30.0% |
| !! | TTTGATTGGTTTATGGTGTT+AGG | - | chr7_1:10172431-10172450 | None:intergenic | 30.0% |
| ! | AATCATAATTTGTGTCACTG+AGG | - | chr7_1:10172520-10172539 | None:intergenic | 30.0% |
| ! | AAGCTTTGTCATTAAGAACT+TGG | - | chr7_1:10172574-10172593 | None:intergenic | 30.0% |
| !! | TAATGACAAAGCTTTAGAGA+CGG | + | chr7_1:10172580-10172599 | Msa1009200:intron | 30.0% |
| TATTCTTTCTCCAAGTAAAG+AGG | - | chr7_1:10172686-10172705 | None:intergenic | 30.0% | |
| TAAACACTTGATACACTAAG+TGG | - | chr7_1:10172710-10172729 | None:intergenic | 30.0% | |
| CTTAGTGTATCAAGTGTTTA+TGG | + | chr7_1:10172710-10172729 | Msa1009200:intron | 30.0% | |
| TACTTAACTGCAAGAAGTTA+TGG | + | chr7_1:10172794-10172813 | Msa1009200:intron | 30.0% | |
| GATCAGCTTATCAACATTAT+AGG | + | chr7_1:10172908-10172927 | Msa1009200:intron | 30.0% | |
| AATATGCTGATGTGATTACA+TGG | + | chr7_1:10172975-10172994 | Msa1009200:intron | 30.0% | |
| ATATGCTGATGTGATTACAT+GGG | + | chr7_1:10172976-10172995 | Msa1009200:intron | 30.0% | |
| ACAACATAATCCTTATGAAC+AGG | - | chr7_1:10173019-10173038 | None:intergenic | 30.0% | |
| !! | GATTATGTTGTTTCTATGGA+GGG | + | chr7_1:10173028-10173047 | Msa1009200:intron | 30.0% |
| CATCGTGATGTTATTCTTAA+TGG | + | chr7_1:10173124-10173143 | Msa1009200:intron | 30.0% | |
| GATAAATATAACAATCTCGC+TGG | + | chr7_1:10173169-10173188 | Msa1009200:intron | 30.0% | |
| TTGTGGAAAACAAAGAAAGA+AGG | + | chr7_1:10173361-10173380 | Msa1009200:intron | 30.0% | |
| TTTCTCATCCAACAATATGT+TGG | - | chr7_1:10173842-10173861 | None:intergenic | 30.0% | |
| ACATATTGTTGGATGAGAAA+TGG | + | chr7_1:10173842-10173861 | Msa1009200:intron | 30.0% | |
| ATAGCTAAGGTTTCTGATTT+CGG | + | chr7_1:10173865-10173884 | Msa1009200:intron | 30.0% | |
| CAGATTTAAGAGTAAGTCTT+TGG | - | chr7_1:10173987-10174006 | None:intergenic | 30.0% | |
| ATTCCTAAGAGATTCTATCA+CGG | + | chr7_1:10174155-10174174 | Msa1009200:intron | 30.0% | |
| ! | TTAAGTTGTTTGCATGATGA+TGG | + | chr7_1:10174210-10174229 | Msa1009200:CDS | 30.0% |
| !!! | AACATCTTTTCTCTGAGATT+TGG | + | chr7_1:10174457-10174476 | Msa1009200:CDS | 30.0% |
| TGTGGAGAACGTTAAACTTA+TGG | + | chr7_1:10171474-10171493 | Msa1009200:intron | 35.0% | |
| GTGGAGAACGTTAAACTTAT+GGG | + | chr7_1:10171475-10171494 | Msa1009200:intron | 35.0% | |
| GTTAAACTTATGGGAGAGAA+GGG | + | chr7_1:10171484-10171503 | Msa1009200:intron | 35.0% | |
| TTAAACTTATGGGAGAGAAG+GGG | + | chr7_1:10171485-10171504 | Msa1009200:intron | 35.0% | |
| AGGATCACATAATTGTGGAT+AGG | - | chr7_1:10171684-10171703 | None:intergenic | 35.0% | |
| ATGGTCAAATGATTTCCTTG+GGG | - | chr7_1:10171714-10171733 | None:intergenic | 35.0% | |
| ! | GACTGGTCATTACATTGAAA+TGG | - | chr7_1:10171733-10171752 | None:intergenic | 35.0% |
| TAGATATTGAGAGGTAGGAA+GGG | - | chr7_1:10171780-10171799 | None:intergenic | 35.0% | |
| ATAGATATTGAGAGGTAGGA+AGG | - | chr7_1:10171781-10171800 | None:intergenic | 35.0% | |
| !!! | TGTTTTAAGAGATGGGTTTG+TGG | - | chr7_1:10172105-10172124 | None:intergenic | 35.0% |
| !!! | GTAGGTGATGTTTTAAGAGA+TGG | - | chr7_1:10172113-10172132 | None:intergenic | 35.0% |
| TGCAGTTGTGAATGGAATTT+GGG | - | chr7_1:10172150-10172169 | None:intergenic | 35.0% | |
| GTATGTGAAATTTGACAGAG+AGG | - | chr7_1:10172177-10172196 | None:intergenic | 35.0% | |
| AATGAAGGCGAAGAAAAACA+GGG | - | chr7_1:10172223-10172242 | None:intergenic | 35.0% | |
| AAATGAAGGCGAAGAAAAAC+AGG | - | chr7_1:10172224-10172243 | None:intergenic | 35.0% | |
| ACAGAGAAAATTGCATTGGA+AGG | - | chr7_1:10172275-10172294 | None:intergenic | 35.0% | |
| AAATCTTCAACCCTTCACTT+TGG | + | chr7_1:10172324-10172343 | Msa1009200:intron | 35.0% | |
| CAAAATAGAGCCAAAGTGAA+GGG | - | chr7_1:10172337-10172356 | None:intergenic | 35.0% | |
| TCAAAATAGAGCCAAAGTGA+AGG | - | chr7_1:10172338-10172357 | None:intergenic | 35.0% | |
| GGTTTGGATGCAATATTCTT+TGG | - | chr7_1:10172375-10172394 | None:intergenic | 35.0% | |
| !! | ACTTCTCATTTGGTTTGGTT+TGG | - | chr7_1:10172391-10172410 | None:intergenic | 35.0% |
| ATACAGGCATGTTTCGAAAT+TGG | + | chr7_1:10172648-10172667 | Msa1009200:intron | 35.0% | |
| TACAGGCATGTTTCGAAATT+GGG | + | chr7_1:10172649-10172668 | Msa1009200:intron | 35.0% | |
| TAACTGCAAGAAGTTATGGA+AGG | + | chr7_1:10172798-10172817 | Msa1009200:intron | 35.0% | |
| AACTGCAAGAAGTTATGGAA+GGG | + | chr7_1:10172799-10172818 | Msa1009200:intron | 35.0% | |
| CAGAGGATTACAATGTAACT+TGG | + | chr7_1:10172828-10172847 | Msa1009200:intron | 35.0% | |
| !! | GGATTATGTTGTTTCTATGG+AGG | + | chr7_1:10173027-10173046 | Msa1009200:intron | 35.0% |
| ATAACATCACGATGTACTGT+AGG | - | chr7_1:10173118-10173137 | None:intergenic | 35.0% | |
| ! | TATGACTACGATTGACTTCT+TGG | - | chr7_1:10173239-10173258 | None:intergenic | 35.0% |
| AAGTCAATCGTAGTCATAGT+TGG | + | chr7_1:10173241-10173260 | Msa1009200:intron | 35.0% | |
| !!! | TTCATCGTCGAAGTTTTTTG+TGG | - | chr7_1:10173446-10173465 | None:intergenic | 35.0% |
| TTCGACGATGAAAACATCAT+CGG | + | chr7_1:10173454-10173473 | Msa1009200:intron | 35.0% | |
| ! | CAGAGGCTTGAAATTCTTTT+GGG | + | chr7_1:10173745-10173764 | Msa1009200:intron | 35.0% |
| !! | AAAGAGCACCAACATATTGT+TGG | + | chr7_1:10173831-10173850 | Msa1009200:intron | 35.0% |
| TAGCTAAGGTTTCTGATTTC+GGG | + | chr7_1:10173866-10173885 | Msa1009200:intron | 35.0% | |
| !! | CTTTGGAACATATAGTACTC+AGG | - | chr7_1:10173970-10173989 | None:intergenic | 35.0% |
| AAATCTGATGTGTACTCCTT+CGG | + | chr7_1:10174000-10174019 | Msa1009200:intron | 35.0% | |
| TTATCCAAATCACGAACCAA+AGG | - | chr7_1:10174060-10174079 | None:intergenic | 35.0% | |
| !! | ATACAGCTAGTCTTGTTTGT+TGG | + | chr7_1:10174082-10174101 | Msa1009200:intron | 35.0% |
| TTCAAAAGATGCTACGAAGA+AGG | + | chr7_1:10174105-10174124 | Msa1009200:intron | 35.0% | |
| GTGATAGAATCTCTTAGGAA+TGG | - | chr7_1:10174156-10174175 | None:intergenic | 35.0% | |
| TTCCTAAGAGATTCTATCAC+GGG | + | chr7_1:10174156-10174175 | Msa1009200:intron | 35.0% | |
| ! | TTTAAAGTTTGCGTTGCAGT+TGG | + | chr7_1:10174269-10174288 | Msa1009200:CDS | 35.0% |
| ! | TATGCATGCCATCTCTTTTT+GGG | - | chr7_1:10174328-10174347 | None:intergenic | 35.0% |
| ! | TTATGCATGCCATCTCTTTT+TGG | - | chr7_1:10174329-10174348 | None:intergenic | 35.0% |
| AAAGAGATGGCATGCATAAA+AGG | + | chr7_1:10174330-10174349 | Msa1009200:CDS | 35.0% | |
| ! | TGTGCTCTCCTTAAAAGTAT+GGG | - | chr7_1:10174412-10174431 | None:intergenic | 35.0% |
| TTGTGCTCTCCTTAAAAGTA+TGG | - | chr7_1:10174413-10174432 | None:intergenic | 35.0% | |
| CGTTAAACTTATGGGAGAGA+AGG | + | chr7_1:10171483-10171502 | Msa1009200:intron | 40.0% | |
| GGTGCTAATGCTTAATCACT+TGG | + | chr7_1:10171538-10171557 | Msa1009200:intron | 40.0% | |
| ATGCAATGAACCTAAAGGGT+TGG | + | chr7_1:10171566-10171585 | Msa1009200:intron | 40.0% | |
| ! | GTTGTTGTTGAGATTTGGGA+TGG | - | chr7_1:10171834-10171853 | None:intergenic | 40.0% |
| ACTCTCTTCTCACACAACTA+TGG | + | chr7_1:10171896-10171915 | Msa1009200:intron | 40.0% | |
| ! | ATCTAAGGCAGTGTTTGATG+AGG | - | chr7_1:10172021-10172040 | None:intergenic | 40.0% |
| CATCAAACACTGCCTTAGAT+AGG | + | chr7_1:10172021-10172040 | Msa1009200:intron | 40.0% | |
| AAACACTGCCTTAGATAGGT+GGG | + | chr7_1:10172025-10172044 | Msa1009200:intron | 40.0% | |
| !! | AGAGATGGGTTTGTGGTTTT+TGG | - | chr7_1:10172098-10172117 | None:intergenic | 40.0% |
| TGGGTATTTGAAAGGGAAGT+AGG | - | chr7_1:10172131-10172150 | None:intergenic | 40.0% | |
| GTGCAGTTGTGAATGGAATT+TGG | - | chr7_1:10172151-10172170 | None:intergenic | 40.0% | |
| ATGAAGGCGAAGAAAAACAG+GGG | - | chr7_1:10172222-10172241 | None:intergenic | 40.0% | |
| ATCACTTGACTTCGACAACA+CGG | + | chr7_1:10172544-10172563 | Msa1009200:intron | 40.0% | |
| ACGGTTTATAGAGTCAACGT+TGG | + | chr7_1:10172599-10172618 | Msa1009200:intron | 40.0% | |
| GTTTATAGAGTCAACGTTGG+TGG | + | chr7_1:10172602-10172621 | Msa1009200:intron | 40.0% | |
| TTCGAAACATGCCTGTATCT+TGG | - | chr7_1:10172646-10172665 | None:intergenic | 40.0% | |
| CAACGATTCTCCTCTTTACT+TGG | + | chr7_1:10172673-10172692 | Msa1009200:intron | 40.0% | |
| GCAGTTAAGTATACAGCTTC+TGG | - | chr7_1:10172785-10172804 | None:intergenic | 40.0% | |
| ! | TTGCTCACATTTCTTGCTGT+GGG | + | chr7_1:10173277-10173296 | Msa1009200:intron | 40.0% |
| TGTAAAGTAGCGGCACAAAT+AGG | - | chr7_1:10173404-10173423 | None:intergenic | 40.0% | |
| GATGAAAACATCATCGGTGT+TGG | + | chr7_1:10173460-10173479 | Msa1009200:intron | 40.0% | |
| !! | AAAACATCATCGGTGTTGGA+GGG | + | chr7_1:10173464-10173483 | Msa1009200:intron | 40.0% |
| GTGTACAAAGGTTTCATCGA+TGG | + | chr7_1:10173496-10173515 | Msa1009200:intron | 40.0% | |
| GATCTCGTTCATGAACTCAT+TGG | - | chr7_1:10173572-10173591 | None:intergenic | 40.0% | |
| ATTCACTTGGTATCCCTTGT+GGG | + | chr7_1:10173616-10173635 | Msa1009200:intron | 40.0% | |
| GTCATTGCAATATCCCACAA+GGG | - | chr7_1:10173632-10173651 | None:intergenic | 40.0% | |
| TGTCATTGCAATATCCCACA+AGG | - | chr7_1:10173633-10173652 | None:intergenic | 40.0% | |
| TGACAAGACAGAGATGATTC+TGG | + | chr7_1:10173648-10173667 | Msa1009200:intron | 40.0% | |
| ACTCTCTGCGAGTATCTTTA+TGG | + | chr7_1:10173694-10173713 | Msa1009200:intron | 40.0% | |
| ! | GCAGAGGCTTGAAATTCTTT+TGG | + | chr7_1:10173744-10173763 | Msa1009200:intron | 40.0% |
| GCTGAACTATCTTCATACTG+AGG | + | chr7_1:10173780-10173799 | Msa1009200:intron | 40.0% | |
| GGATGAGAAATGGATAGCTA+AGG | + | chr7_1:10173852-10173871 | Msa1009200:intron | 40.0% | |
| !! | TTCTGATTTCGGGTTATCCA+AGG | + | chr7_1:10173876-10173895 | Msa1009200:intron | 40.0% |
| ACTCAGGATCTAAATACCCA+AGG | - | chr7_1:10173954-10173973 | None:intergenic | 40.0% | |
| TGTGGCGATTGAACAAATAG+TGG | + | chr7_1:10174128-10174147 | Msa1009200:intron | 40.0% | |
| TGATACGACCCAAAAAGAGA+TGG | + | chr7_1:10174317-10174336 | Msa1009200:CDS | 40.0% | |
| TCGCAATCTATGAGTGATGA+AGG | + | chr7_1:10174363-10174382 | Msa1009200:CDS | 40.0% | |
| CGCAATCTATGAGTGATGAA+GGG | + | chr7_1:10174364-10174383 | Msa1009200:CDS | 40.0% | |
| ! | CGCAAGATCCCATACTTTTA+AGG | + | chr7_1:10174401-10174420 | Msa1009200:CDS | 40.0% |
| GGGAATACTTCCAACCCTTT+AGG | - | chr7_1:10171579-10171598 | None:intergenic | 45.0% | |
| GATTTCCTTGGGGAGCAATT+AGG | - | chr7_1:10171704-10171723 | None:intergenic | 45.0% | |
| CAAACACTGCCTTAGATAGG+TGG | + | chr7_1:10172024-10172043 | Msa1009200:intron | 45.0% | |
| ATCACCAACCCACCTATCTA+AGG | - | chr7_1:10172036-10172055 | None:intergenic | 45.0% | |
| GTTCCAGCAAACCAAGATAC+AGG | + | chr7_1:10172632-10172651 | Msa1009200:intron | 45.0% | |
| !! | ATGCCTGTATCTTGGTTTGC+TGG | - | chr7_1:10172638-10172657 | None:intergenic | 45.0% |
| GCTTCTGGTGCAGTGTAATT+TGG | - | chr7_1:10172770-10172789 | None:intergenic | 45.0% | |
| TTATGGAAGGGATGTGACAG+AGG | + | chr7_1:10172811-10172830 | Msa1009200:intron | 45.0% | |
| ! | GCGTTTGGTTCCTGTTCATA+AGG | + | chr7_1:10173006-10173025 | Msa1009200:intron | 45.0% |
| TCACGATGTACTGTAGGCAT+GGG | - | chr7_1:10173112-10173131 | None:intergenic | 45.0% | |
| ATCACGATGTACTGTAGGCA+TGG | - | chr7_1:10173113-10173132 | None:intergenic | 45.0% | |
| CTTGCTCACATTTCTTGCTG+TGG | + | chr7_1:10173276-10173295 | Msa1009200:intron | 45.0% | |
| AAGTAGCGGCACAAATAGGA+TGG | - | chr7_1:10173400-10173419 | None:intergenic | 45.0% | |
| TCTCCGCGATTGTAAAGTAG+CGG | - | chr7_1:10173414-10173433 | None:intergenic | 45.0% | |
| !! | GAAAACATCATCGGTGTTGG+AGG | + | chr7_1:10173463-10173482 | Msa1009200:intron | 45.0% |
| GGGTTTGGCAATGTGTACAA+AGG | + | chr7_1:10173484-10173503 | Msa1009200:intron | 45.0% | |
| CAAGTGAATGTGGCGAAGTT+GGG | - | chr7_1:10173605-10173624 | None:intergenic | 45.0% | |
| CAAGGGATACCAAGTGAATG+TGG | - | chr7_1:10173615-10173634 | None:intergenic | 45.0% | |
| CATTCACTTGGTATCCCTTG+TGG | + | chr7_1:10173615-10173634 | Msa1009200:intron | 45.0% | |
| ATTTCAAGCCTCTGCTTCCA+TGG | - | chr7_1:10173739-10173758 | None:intergenic | 45.0% | |
| !! | TGATTTCGGGTTATCCAAGG+TGG | + | chr7_1:10173879-10173898 | Msa1009200:intron | 45.0% |
| !! | GATTTCGGGTTATCCAAGGT+GGG | + | chr7_1:10173880-10173899 | Msa1009200:intron | 45.0% |
| TGAGTAGTCGATATCCCTGA+CGG | - | chr7_1:10173907-10173926 | None:intergenic | 45.0% | |
| !! | TTCTTGAGGTGTTGTGTGCT+AGG | + | chr7_1:10174031-10174050 | Msa1009200:intron | 45.0% |
| TCCAAATCACGAACCAAAGG+TGG | - | chr7_1:10174057-10174076 | None:intergenic | 45.0% | |
| AAGATGCTACGAAGAAGGTG+TGG | + | chr7_1:10174110-10174129 | Msa1009200:intron | 45.0% | |
| CACCCGTGATAGAATCTCTT+AGG | - | chr7_1:10174161-10174180 | None:intergenic | 45.0% | |
| TTCTATCACGGGTGTGTGTT+TGG | + | chr7_1:10174167-10174186 | Msa1009200:intron | 45.0% | |
| AAAGTTTGCGTTGCAGTTGG+TGG | + | chr7_1:10174272-10174291 | Msa1009200:CDS | 45.0% | |
| TGGCATGCATAAAAGGCCTA+CGG | + | chr7_1:10174337-10174356 | Msa1009200:CDS | 45.0% | |
| TCATAGATTGCGAGAACCGT+AGG | - | chr7_1:10174356-10174375 | None:intergenic | 45.0% | |
| TCTATGAGTGATGAAGGGAG+TGG | + | chr7_1:10174369-10174388 | Msa1009200:CDS | 45.0% | |
| GTGATCCTAATTGCTCCCCA+AGG | + | chr7_1:10171696-10171715 | Msa1009200:intron | 50.0% | |
| ACTGCCTTAGATAGGTGGGT+TGG | + | chr7_1:10172029-10172048 | Msa1009200:intron | 50.0% | |
| GCTGATGTGATTACATGGGC+TGG | + | chr7_1:10172980-10172999 | Msa1009200:intron | 50.0% | |
| ! | TGTACTGTAGGCATGGGTTG+TGG | - | chr7_1:10173106-10173125 | None:intergenic | 50.0% |
| ! | GTGCCGCTACTTTACAATCG+CGG | + | chr7_1:10173408-10173427 | Msa1009200:intron | 50.0% |
| !! | ATCATCGGTGTTGGAGGGTT+TGG | + | chr7_1:10173469-10173488 | Msa1009200:intron | 50.0% |
| !! | CTGAGGCGTTTTATCGCAAC+GGG | - | chr7_1:10173529-10173548 | None:intergenic | 50.0% |
| !! | CCTGAGGCGTTTTATCGCAA+CGG | - | chr7_1:10173530-10173549 | None:intergenic | 50.0% |
| CCAAGTGAATGTGGCGAAGT+TGG | - | chr7_1:10173606-10173625 | None:intergenic | 50.0% | |
| CCAACTTCGCCACATTCACT+TGG | + | chr7_1:10173603-10173622 | Msa1009200:intron | 50.0% | |
| GTCTACGAGTTCATGCAGCA+CGG | + | chr7_1:10173670-10173689 | Msa1009200:intron | 50.0% | |
| CTAATAACCAGCCCCTACCA+TGG | + | chr7_1:10173719-10173738 | Msa1009200:intron | 50.0% | |
| AAGCCTCTGCTTCCATGGTA+GGG | - | chr7_1:10173734-10173753 | None:intergenic | 50.0% | |
| !! | ATTCTTTTGGGTGCAGCGAG+AGG | + | chr7_1:10173757-10173776 | Msa1009200:intron | 50.0% |
| !! | TTCTTTTGGGTGCAGCGAGA+GGG | + | chr7_1:10173758-10173777 | Msa1009200:intron | 50.0% |
| ! | CTCAAGAAGCACAACACCGA+AGG | - | chr7_1:10174019-10174038 | None:intergenic | 50.0% |
| !! | CTTCGGTGTTGTGCTTCTTG+AGG | + | chr7_1:10174017-10174036 | Msa1009200:intron | 50.0% |
| ! | GCCACCTTTGGTTCGTGATT+TGG | + | chr7_1:10174053-10174072 | Msa1009200:intron | 50.0% |
| TCAACGACCCTCAATGAGTC+AGG | + | chr7_1:10174236-10174255 | Msa1009200:CDS | 50.0% | |
| GAGGCACGTGCAGTTGTGAA+TGG | - | chr7_1:10172158-10172177 | None:intergenic | 55.0% | |
| ! | GCGTTTTATCGCAACGGGTG+TGG | - | chr7_1:10173524-10173543 | None:intergenic | 55.0% |
| CCGTTGCGATAAAACGCCTC+AGG | + | chr7_1:10173527-10173546 | Msa1009200:intron | 55.0% | |
| GCGATAAAACGCCTCAGGTC+AGG | + | chr7_1:10173532-10173551 | Msa1009200:intron | 55.0% | |
| CTTGTTGAGAGCCTGACCTG+AGG | - | chr7_1:10173546-10173565 | None:intergenic | 55.0% | |
| CTCAGGTCAGGCTCTCAACA+AGG | + | chr7_1:10173544-10173563 | Msa1009200:intron | 55.0% | |
| AGCCTCTGCTTCCATGGTAG+GGG | - | chr7_1:10173733-10173752 | None:intergenic | 55.0% | |
| CAAGCCTCTGCTTCCATGGT+AGG | - | chr7_1:10173735-10173754 | None:intergenic | 55.0% | |
| TTATCCAAGGTGGGACCGTC+AGG | + | chr7_1:10173889-10173908 | Msa1009200:intron | 55.0% | |
| TATCCAAGGTGGGACCGTCA+GGG | + | chr7_1:10173890-10173909 | Msa1009200:intron | 55.0% | |
| GACTACTCACGTCAGCACGA+TGG | + | chr7_1:10173918-10173937 | Msa1009200:intron | 55.0% | |
| TCACGTCAGCACGATGGTGA+AGG | + | chr7_1:10173924-10173943 | Msa1009200:intron | 55.0% | |
| CACGTCAGCACGATGGTGAA+GGG | + | chr7_1:10173925-10173944 | Msa1009200:intron | 55.0% | |
| ACGTCAGCACGATGGTGAAG+GGG | + | chr7_1:10173926-10173945 | Msa1009200:intron | 55.0% | |
| GTTGTGTGCTAGGCCACCTT+TGG | + | chr7_1:10174041-10174060 | Msa1009200:intron | 55.0% | |
| ACGACCCTCAATGAGTCAGG+TGG | + | chr7_1:10174239-10174258 | Msa1009200:CDS | 55.0% | |
| CCAGCCACCTGACTCATTGA+GGG | - | chr7_1:10174246-10174265 | None:intergenic | 55.0% | |
| CCTCAATGAGTCAGGTGGCT+GGG | + | chr7_1:10174244-10174263 | Msa1009200:CDS | 55.0% | |
| CTCAATGAGTCAGGTGGCTG+GGG | + | chr7_1:10174245-10174264 | Msa1009200:CDS | 55.0% | |
| TCAATGAGTCAGGTGGCTGG+GGG | + | chr7_1:10174246-10174265 | Msa1009200:CDS | 55.0% | |
| !! | GTTGCAGTTGGTGGTGAGTG+AGG | + | chr7_1:10174281-10174300 | Msa1009200:CDS | 55.0% |
| GGTGAGTGAGGAAGATAGCG+AGG | + | chr7_1:10174293-10174312 | Msa1009200:CDS | 55.0% | |
| ! | AGGAGAGCACAATCTCAGCG+AGG | + | chr7_1:10174421-10174440 | Msa1009200:CDS | 55.0% |
| !! | TACATGGGCTGGTGCGCGTT+TGG | + | chr7_1:10172991-10173010 | Msa1009200:intron | 60.0% |
| TCTGCTTCCATGGTAGGGGC+TGG | - | chr7_1:10173729-10173748 | None:intergenic | 60.0% | |
| AGCCCCTACCATGGAAGCAG+AGG | + | chr7_1:10173728-10173747 | Msa1009200:intron | 60.0% | |
| TATCCCTGACGGTCCCACCT+TGG | - | chr7_1:10173896-10173915 | None:intergenic | 60.0% | |
| ACGATGGTGAAGGGGAGCCT+TGG | + | chr7_1:10173934-10173953 | Msa1009200:intron | 60.0% | |
| CGATGGTGAAGGGGAGCCTT+GGG | + | chr7_1:10173935-10173954 | Msa1009200:intron | 60.0% | |
| CCCTCAATGAGTCAGGTGGC+TGG | + | chr7_1:10174243-10174262 | Msa1009200:CDS | 60.0% | |
| CCCAGCCACCTGACTCATTG+AGG | - | chr7_1:10174247-10174266 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 10171462 | 10174530 | 10171462 | ID=Msa1009200;Name=Msa1009200 |
| chr7_1 | mRNA | 10171462 | 10174530 | 10171462 | ID=Msa1009200-mRNA-1;Parent=Msa1009200;Name=Msa1009200-mRNA-1;_AED=0.73;_eAED=0.73;_QI=0|0|0|0.5|0|0|2|0|110 |
| chr7_1 | exon | 10171462 | 10171467 | 10171462 | ID=Msa1009200-mRNA-1:exon:2845;Parent=Msa1009200-mRNA-1 |
| chr7_1 | exon | 10174204 | 10174530 | 10174204 | ID=Msa1009200-mRNA-1:exon:2846;Parent=Msa1009200-mRNA-1 |
| chr7_1 | CDS | 10171462 | 10171467 | 10171462 | ID=Msa1009200-mRNA-1:cds;Parent=Msa1009200-mRNA-1 |
| chr7_1 | CDS | 10174204 | 10174530 | 10174204 | ID=Msa1009200-mRNA-1:cds;Parent=Msa1009200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
