AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031860 MtrunA17_Chr7g0253541 86.452 465 31 3 1 433 1 465 0.0 774
Msa1031860 MtrunA17_Chr7g0253531 41.807 476 220 14 4 433 2 466 2.42e-116 348
Msa1031860 MtrunA17_Chr7g0253501 41.300 477 221 14 4 433 2 466 6.60e-110 332
Msa1031860 MtrunA17_Chr4g0072041 35.792 461 243 15 4 425 14 460 1.26e-76 246
Msa1031860 MtrunA17_Chr3g0087401 34.979 466 243 16 4 425 2 451 8.90e-73 235
Msa1031860 MtrunA17_Chr4g0054081 35.099 453 246 15 10 425 15 456 1.17e-69 227
Msa1031860 MtrunA17_Chr4g0001861 32.438 447 258 15 4 423 3 432 8.01e-68 222
Msa1031860 MtrunA17_Chr2g0334001 31.544 447 261 14 4 423 3 431 3.31e-67 220
Msa1031860 MtrunA17_Chr8g0371821 32.662 447 253 16 4 423 3 428 2.03e-66 218
Msa1031860 MtrunA17_Chr7g0253521 62.838 148 25 1 316 433 7 154 6.42e-58 187
Msa1031860 MtrunA17_Chr8g0386141 30.923 401 238 14 2 381 5 387 2.00e-46 166
Msa1031860 MtrunA17_Chr3g0132001 31.392 395 223 17 12 381 22 393 3.49e-46 165
Msa1031860 MtrunA17_Chr2g0311401 30.794 315 176 11 136 423 2 301 1.28e-42 152
Msa1031860 MtrunA17_Chr7g0224391 30.749 387 229 15 11 376 23 391 1.65e-41 152
Msa1031860 MtrunA17_Chr4g0004701 34.818 247 122 6 212 425 2 242 9.04e-38 137
Msa1031860 MtrunA17_Chr7g0252731 28.993 407 240 17 2 389 15 391 2.75e-37 140
Msa1031860 MtrunA17_Chr1g0165671 27.563 439 269 19 12 423 35 451 7.02e-36 137
Msa1031860 MtrunA17_Chr1g0165661 28.900 391 231 19 11 375 16 385 3.70e-35 135
Msa1031860 MtrunA17_Chr4g0004691 38.542 192 109 3 1 190 1 185 5.16e-35 128
Msa1031860 MtrunA17_Chr1g0165711 28.046 435 249 20 12 433 17 400 1.13e-33 130
Msa1031860 MtrunA17_Chr1g0165681 27.720 386 242 14 12 376 17 386 1.98e-33 130
Msa1031860 MtrunA17_Chr7g0273731 26.327 452 272 19 11 428 100 524 2.63e-29 120
Msa1031860 MtrunA17_Chr5g0433641 25.522 431 268 19 11 409 17 426 9.42e-29 117
Msa1031860 MtrunA17_Chr2g0306321 26.824 466 287 20 2 429 16 465 3.95e-28 115
Msa1031860 MtrunA17_Chr7g0273721 25.806 434 264 20 11 409 18 428 1.92e-27 114
Msa1031860 MtrunA17_Chr3g0134071 31.023 303 170 13 44 327 54 336 1.15e-26 112
Msa1031860 MtrunA17_Chr3g0113181 27.928 444 231 20 12 393 20 436 1.70e-26 111
Msa1031860 MtrunA17_Chr1g0199561 24.757 412 251 10 2 376 1 390 1.86e-26 110
Msa1031860 MtrunA17_Chr8g0376911 25.858 437 255 16 2 402 1 404 2.07e-26 110
Msa1031860 MtrunA17_Chr1g0191081 24.297 391 263 12 5 375 17 394 2.86e-26 110
Msa1031860 MtrunA17_Chr5g0442691 26.810 373 201 15 54 376 84 434 3.67e-26 110
Msa1031860 MtrunA17_Chr6g0470591 29.697 330 196 13 3 312 8 321 5.58e-26 109
Msa1031860 MtrunA17_Chr3g0097841 31.418 261 134 11 209 433 2 253 5.73e-26 105
Msa1031860 MtrunA17_Chr5g0442701 27.078 373 200 15 54 376 61 411 1.80e-25 108
Msa1031860 MtrunA17_Chr3g0123061 24.781 456 269 20 2 429 3 412 3.76e-25 106
Msa1031860 MtrunA17_Chr5g0442721 25.389 386 219 14 42 376 46 413 1.28e-24 105
Msa1031860 MtrunA17_Chr2g0278481 23.454 469 282 16 1 428 14 446 1.29e-24 105
Msa1031860 MtrunA17_Chr4g0027071 26.253 419 248 17 2 381 10 406 1.60e-24 105
Msa1031860 MtrunA17_Chr3g0113821 26.829 328 224 8 3 322 4 323 2.66e-24 104
Msa1031860 MtrunA17_Chr3g0134041 27.937 383 202 18 62 400 69 421 3.06e-24 104
Msa1031860 MtrunA17_Chr7g0219331 25.708 459 283 14 9 425 109 551 5.34e-24 104
Msa1031860 MtrunA17_Chr3g0106721 28.440 327 203 11 2 312 8 319 5.36e-24 103
Msa1031860 MtrunA17_Chr8g0359251 27.861 402 216 17 59 418 63 432 9.24e-24 102
Msa1031860 MtrunA17_Chr7g0273781 24.731 465 283 23 1 428 40 474 1.15e-23 103
Msa1031860 MtrunA17_Chr7g0235531 24.641 418 263 15 1 384 1 400 1.46e-23 102
Msa1031860 MtrunA17_Chr7g0273761 23.937 447 286 20 11 426 389 812 2.35e-23 103
Msa1031860 MtrunA17_Chr3g0141851 26.744 430 252 16 12 407 20 420 2.64e-23 101
Msa1031860 MtrunA17_Chr5g0438701 22.851 442 295 13 2 421 1 418 3.39e-23 101
Msa1031860 MtrunA17_Chr4g0053111 26.432 454 257 20 9 417 16 437 3.61e-23 101
Msa1031860 MtrunA17_Chr3g0106691 29.630 324 202 13 2 313 54 363 3.78e-23 101
Msa1031860 MtrunA17_Chr6g0467861 25.446 448 252 18 2 389 45 470 3.98e-23 101
Msa1031860 MtrunA17_Chr7g0219291 24.160 476 293 18 3 425 355 815 5.00e-23 102
Msa1031860 MtrunA17_Chr2g0302471 35.256 156 91 2 1 156 1 146 1.33e-22 93.6
Msa1031860 MtrunA17_Chr8g0354371 26.942 412 229 17 47 417 50 430 1.44e-22 99.4
Msa1031860 MtrunA17_Chr7g0219241 24.691 486 283 20 3 425 8 473 2.22e-22 99.4
Msa1031860 MtrunA17_Chr2g0283361 28.148 405 243 17 57 432 56 441 9.96e-22 97.1
Msa1031860 MtrunA17_Chr3g0134091 27.525 396 222 19 62 418 71 440 1.32e-21 96.7
Msa1031860 MtrunA17_Chr7g0273791 23.937 447 289 19 11 428 17 441 1.69e-21 96.7
Msa1031860 MtrunA17_Chr3g0106661 28.228 333 200 13 2 313 8 322 1.91e-21 96.3
Msa1031860 MtrunA17_Chr5g0408911 26.131 398 238 17 54 418 69 443 6.90e-21 94.7
Msa1031860 MtrunA17_Chr3g0134061 27.622 286 164 13 59 320 68 334 7.65e-21 94.7
Msa1031860 MtrunA17_Chr3g0134121 26.531 392 219 19 59 409 69 432 8.40e-21 94.7
Msa1031860 MtrunA17_Chr7g0219181 24.684 474 301 18 3 425 7 475 1.41e-20 94.0
Msa1031860 MtrunA17_Chr8g0361781 23.333 450 270 17 11 418 10 426 2.59e-20 92.8
Msa1031860 MtrunA17_Chr8g0361771 24.879 414 241 16 4 376 1 385 2.74e-20 92.8
Msa1031860 MtrunA17_Chr8g0376901 24.053 449 267 18 2 411 1 414 3.57e-20 92.4
Msa1031860 MtrunA17_Chr7g0219301 26.160 474 277 16 1 421 1 454 5.77e-20 92.8
Msa1031860 MtrunA17_Chr6g0455361 25.485 412 238 19 62 428 73 460 1.20e-19 90.9
Msa1031860 MtrunA17_Chr3g0134111 28.881 277 160 13 62 320 68 325 3.34e-19 89.7
Msa1031860 MtrunA17_Chr4g0053081 25.126 398 237 18 57 417 62 435 3.81e-19 89.4
Msa1031860 MtrunA17_Chr3g0095731 24.595 370 201 15 59 375 65 409 5.36e-19 89.0
Msa1031860 MtrunA17_Chr3g0095721 24.863 366 202 15 59 375 72 413 6.03e-19 89.0
Msa1031860 MtrunA17_Chr3g0125001 31.154 260 156 13 62 313 58 302 7.26e-19 88.2
Msa1031860 MtrunA17_Chr8g0374641 25.693 397 220 15 59 409 59 426 7.43e-19 88.6
Msa1031860 MtrunA17_Chr3g0106761 26.990 289 174 10 54 325 9 277 7.76e-19 88.2
Msa1031860 MtrunA17_Chr7g0219121 24.397 373 217 13 59 376 67 429 7.77e-19 88.6
Msa1031860 MtrunA17_Chr7g0219881 24.145 468 291 23 3 421 4 456 1.69e-18 87.4
Msa1031860 MtrunA17_Chr3g0106711 31.658 199 124 7 2 191 8 203 3.50e-18 83.6
Msa1031860 MtrunA17_Chr3g0106741 28.114 281 166 10 48 312 33 293 3.99e-18 86.3
Msa1031860 MtrunA17_Chr6g0455341 25.110 454 274 20 21 428 30 463 4.17e-18 86.3
Msa1031860 MtrunA17_Chr3g0087901 26.812 414 252 17 6 376 11 416 9.58e-18 85.1
Msa1031860 MtrunA17_Chr7g0270771 31.122 196 121 7 11 202 12 197 1.05e-17 82.8
Msa1031860 MtrunA17_Chr3g0134101 27.397 438 232 20 19 409 35 433 1.27e-17 84.7
Msa1031860 MtrunA17_Chr4g0010311 25.564 399 220 19 40 385 32 406 1.60e-17 84.3
Msa1031860 MtrunA17_Chr4g0010381 25.310 403 229 16 59 417 55 429 2.11e-17 84.0
Msa1031860 MtrunA17_Chr5g0438681 23.362 458 292 15 2 433 1 425 2.24e-17 84.0
Msa1031860 MtrunA17_Chr1g0163441 24.541 436 278 16 9 418 14 424 4.39e-17 83.2
Msa1031860 MtrunA17_Chr7g0224131 26.462 359 193 17 62 376 58 389 5.32e-17 82.8
Msa1031860 MtrunA17_Chr2g0323511 24.167 480 295 16 7 430 21 487 7.25e-16 79.7
Msa1031860 MtrunA17_Chr4g0010121 23.913 414 238 17 59 427 99 480 1.78e-15 78.2
Msa1031860 MtrunA17_Chr4g0010331 25.628 398 223 18 62 417 58 424 1.96e-15 77.8
Msa1031860 MtrunA17_Chr3g0132831 23.516 438 287 15 5 418 12 425 1.98e-15 78.2
Msa1031860 MtrunA17_Chr3g0087221 27.599 279 170 12 59 318 55 320 2.45e-15 77.8
Msa1031860 MtrunA17_Chr2g0311411 31.469 143 95 3 4 146 3 142 3.38e-15 72.8
Msa1031860 MtrunA17_Chr4g0010351 29.924 264 160 13 62 312 58 309 3.84e-15 76.6
Msa1031860 MtrunA17_Chr4g0053061 24.615 390 238 15 59 409 87 459 4.34e-15 77.0
Msa1031860 MtrunA17_Chr6g0454761 21.495 428 281 13 39 426 531 943 4.68e-15 77.8
Msa1031860 MtrunA17_Chr6g0454761 21.888 466 303 16 4 426 8 455 3.69e-14 74.7
Msa1031860 MtrunA17_Chr4g0010361 24.865 370 201 15 62 382 58 399 5.59e-14 73.6
Msa1031860 MtrunA17_Chr6g0471971 27.313 227 138 9 155 375 1 206 3.21e-13 68.9
Msa1031860 MtrunA17_Chr2g0298091 25.475 263 168 7 24 279 34 275 5.47e-13 70.5
Msa1031860 MtrunA17_Chr7g0219211 26.389 216 125 7 3 194 8 213 1.70e-12 68.2
Msa1031860 MtrunA17_Chr6g0471371 33.582 134 82 3 11 140 16 146 7.99e-12 63.5
Msa1031860 MtrunA17_Chr2g0323471 24.022 358 224 13 58 376 81 429 1.71e-11 65.9
Msa1031860 MtrunA17_Chr3g0083761 24.582 419 255 19 6 376 8 413 3.81e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031860 AT2G19070.1 35.217 460 254 12 1 425 1 451 1.77e-87 274
Msa1031860 AT5G48930.1 30.958 449 266 14 2 423 1 432 1.41e-61 206
Msa1031860 AT5G57840.1 30.088 452 270 14 2 423 1 436 1.81e-52 182
Msa1031860 AT5G41040.2 28.822 399 243 15 2 376 13 394 3.81e-45 162
Msa1031860 AT5G41040.1 28.822 399 243 15 2 376 29 410 7.86e-45 162
Msa1031860 AT3G48720.1 30.848 389 226 17 11 376 16 384 8.91e-41 150
Msa1031860 AT5G63560.1 30.513 390 222 16 11 376 16 380 3.35e-39 146
Msa1031860 AT1G65450.1 26.562 448 291 16 2 425 16 449 5.36e-34 132
Msa1031860 AT3G26040.1 27.974 454 263 17 11 433 10 430 5.39e-34 132
Msa1031860 AT3G29635.1 26.856 458 258 18 22 428 26 457 9.41e-33 129
Msa1031860 AT3G03480.1 25.431 464 288 19 2 432 15 453 2.42e-30 122
Msa1031860 AT3G30280.1 28.125 448 250 17 11 419 13 427 4.97e-30 121
Msa1031860 AT1G24430.1 28.505 428 248 15 2 402 3 399 5.53e-30 121
Msa1031860 AT5G17540.1 25.109 458 285 24 3 428 8 439 2.75e-29 119
Msa1031860 AT3G62160.1 26.355 406 224 19 11 381 12 377 4.38e-29 118
Msa1031860 AT2G25150.1 27.143 420 262 15 11 401 20 424 1.93e-27 114
Msa1031860 AT1G78990.1 27.606 355 194 15 59 376 67 395 3.67e-27 113
Msa1031860 AT5G07080.1 30.225 311 195 11 11 312 21 318 6.05e-27 112
Msa1031860 AT3G29670.1 25.908 413 251 17 44 421 53 445 1.22e-26 111
Msa1031860 AT2G40230.1 27.569 399 246 14 4 376 5 386 2.10e-26 110
Msa1031860 AT1G32910.1 27.019 359 210 14 52 376 58 398 3.00e-26 110
Msa1031860 AT1G03390.1 25.764 458 285 18 2 421 15 455 9.10e-26 109
Msa1031860 AT4G15390.1 25.664 452 257 16 11 419 15 430 4.40e-25 107
Msa1031860 AT4G15390.2 25.664 452 257 16 11 419 15 430 4.40e-25 107
Msa1031860 AT1G28680.1 25.783 415 250 17 1 381 1 391 8.87e-25 106
Msa1031860 AT3G47170.1 29.664 327 191 13 11 312 19 331 9.53e-25 106
Msa1031860 AT1G27620.1 26.559 433 272 17 11 422 16 423 3.62e-24 104
Msa1031860 AT3G29590.1 26.601 406 229 16 66 426 68 449 4.03e-24 104
Msa1031860 AT5G47950.1 26.230 427 248 16 11 409 13 400 7.30e-24 103
Msa1031860 AT5G23940.1 26.804 388 248 15 59 419 65 443 1.00e-23 103
Msa1031860 AT5G23970.1 25.571 438 260 18 2 409 1 402 1.24e-23 102
Msa1031860 AT2G23510.1 25.854 410 238 15 11 381 20 402 8.79e-23 100
Msa1031860 AT3G29680.1 25.000 456 298 16 4 427 6 449 4.58e-22 98.6
Msa1031860 AT1G28680.2 27.219 338 203 14 1 319 1 314 7.03e-22 97.4
Msa1031860 AT1G24420.2 24.183 459 288 15 3 433 4 430 2.39e-21 96.3
Msa1031860 AT1G24420.1 24.183 459 288 15 3 433 4 430 2.39e-21 96.3
Msa1031860 AT5G39080.1 25.625 480 277 23 4 427 8 463 4.18e-21 95.9
Msa1031860 AT3G50280.1 27.807 374 194 20 59 386 59 402 2.75e-20 93.2
Msa1031860 AT5G16410.1 24.234 359 204 14 57 376 89 418 7.17e-20 92.0
Msa1031860 AT4G31910.1 25.762 361 222 14 59 381 64 416 7.56e-20 92.0
Msa1031860 AT5G39090.1 25.949 474 265 21 6 426 8 448 1.19e-19 91.3
Msa1031860 AT5G47980.1 23.241 469 289 16 2 433 3 437 1.88e-19 90.5
Msa1031860 AT1G31490.1 24.331 411 246 14 1 376 3 383 2.26e-19 90.5
Msa1031860 AT5G07870.1 28.148 405 246 19 59 431 72 463 2.65e-19 90.5
Msa1031860 AT5G07860.1 29.537 281 170 11 59 329 72 334 3.14e-19 90.1
Msa1031860 AT1G03940.1 23.355 471 295 18 6 426 11 465 1.50e-18 88.2
Msa1031860 AT3G50270.1 26.716 408 227 22 21 386 30 407 2.41e-18 87.4
Msa1031860 AT5G07850.1 23.844 411 250 17 59 431 70 455 3.00e-18 87.0
Msa1031860 AT5G42830.1 28.253 269 159 13 59 311 64 314 6.17e-18 86.3
Msa1031860 AT5G38130.1 27.004 474 262 27 1 425 21 459 3.48e-17 84.0
Msa1031860 AT1G65450.3 24.746 295 192 11 151 425 1 285 6.47e-17 81.3
Msa1031860 AT4G15400.1 24.675 462 283 20 2 433 3 429 2.98e-16 80.9
Msa1031860 AT3G50300.1 26.066 422 223 22 59 428 59 443 3.84e-16 80.5
Msa1031860 AT1G03495.1 25.220 341 213 13 6 317 11 338 4.13e-16 79.7
Msa1031860 AT5G39050.1 24.842 475 301 18 1 426 1 468 9.37e-15 76.6
Msa1031860 AT3G50290.1 29.444 180 112 7 135 311 19 186 1.59e-11 65.1

Find 83 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGCCTAAGAATTATTT+TGG 0.081602 7_1:-66614572 Msa1031860:CDS
CCGTTTAATGAGACCGATTT+TGG 0.124040 7_1:-66614297 Msa1031860:CDS
CTGGGTCGTTCTGTTCTTGA+TGG 0.283808 7_1:-66615016 Msa1031860:CDS
GATATTGCTTTAAAAGATTT+AGG 0.292155 7_1:-66615172 Msa1031860:CDS
AAGTGCGCTTTGAAGGAAAT+TGG 0.321861 7_1:-66614649 Msa1031860:CDS
CTATGTATGAACGGTGGATT+TGG 0.326559 7_1:+66615467 None:intergenic
CCTTGTGGGTCACTCACTCT+TGG 0.327948 7_1:-66615046 Msa1031860:CDS
ACTCACTCTTGGTCTTGCTC+TGG 0.329835 7_1:-66615035 Msa1031860:CDS
TGTTGCAATGAAGTTGTAAA+TGG 0.331490 7_1:+66615227 None:intergenic
TAAAGTTGGTATCCATGGTT+AGG 0.353132 7_1:+66615379 None:intergenic
CAACCAACAACATACAAATT+CGG 0.366121 7_1:+66614330 None:intergenic
GCATTCCCAAAATAATTCTT+AGG 0.370343 7_1:+66614566 None:intergenic
AGGTTATTAGTTGTTACATA+TGG 0.371511 7_1:-66614685 Msa1031860:CDS
AACAAAGGAACATCTTCAAC+TGG 0.377562 7_1:+66615091 None:intergenic
ACCAAGGTTGTTAACCTTGT+TGG 0.383376 7_1:+66614620 None:intergenic
GCTAAAAGAAATGGACAATT+CGG 0.390063 7_1:-66614360 Msa1031860:CDS
AGTTGAAGATGTTCCTTTGT+TGG 0.391503 7_1:-66615089 Msa1031860:CDS
TATATTCTTGATGAAGCTAA+TGG 0.402079 7_1:-66614213 Msa1031860:CDS
CCTGGTATTGTTAATTCTGA+TGG 0.403024 7_1:-66614249 Msa1031860:CDS
CTGGTAGTTTCATTAGCTCA+TGG 0.408004 7_1:-66614985 Msa1031860:CDS
ACTCACTACTATCCCTTTGC+AGG 0.409005 7_1:-66615277 Msa1031860:CDS
AACAAAGTTCTATCATGAAA+TGG 0.413409 7_1:+66614920 None:intergenic
CCTTGGTTAATTGTAGAAAC+AGG 0.414948 7_1:-66614604 Msa1031860:CDS
TTGACACTATCATCACAGTT+TGG 0.415059 7_1:+66614098 None:intergenic
GTTCTTGATGGTTCTTCTGC+TGG 0.417833 7_1:-66615004 Msa1031860:CDS
AAACCTGATTGTATGGTTCC+TGG 0.419876 7_1:-66614267 Msa1031860:CDS
ATCATGAAATGGAATCATAC+TGG 0.425406 7_1:+66614931 None:intergenic
ATAGTAGTGAGTGAGTGTTT+TGG 0.427197 7_1:+66615288 None:intergenic
CCAAAATCGGTCTCATTAAA+CGG 0.433375 7_1:+66614297 None:intergenic
AGTTTACCAAGTTTCCTTGT+GGG 0.443352 7_1:-66615060 Msa1031860:CDS
CTCACTCTTGGTCTTGCTCT+GGG 0.445044 7_1:-66615034 Msa1031860:CDS
ATTGTTAATTCTGATGGTAT+TGG 0.447032 7_1:-66614243 Msa1031860:CDS
GACCCGAATTTGTATGTTGT+TGG 0.459492 7_1:-66614333 Msa1031860:CDS
GTTTGTAAAGTGCGCTTTGA+AGG 0.462639 7_1:-66614656 Msa1031860:CDS
TGTTTGTGAAGAGGTAAAGT+TGG 0.465289 7_1:+66615365 None:intergenic
AACCAACAACATACAAATTC+GGG 0.478369 7_1:+66614331 None:intergenic
TAATTCTGATGGTATTGGTA+AGG 0.485819 7_1:-66614238 Msa1031860:CDS
CCAAAATAATTCTTAGGCAA+AGG 0.492931 7_1:+66614572 None:intergenic
TTTCCCAACCACATAACAAA+AGG 0.494238 7_1:+66614491 None:intergenic
CGAATTTGTATGTTGTTGGT+TGG 0.496564 7_1:-66614329 Msa1031860:CDS
GGTGAATTTCAACATGGTAG+TGG 0.502907 7_1:+66614781 None:intergenic
CAGTTTACCAAGTTTCCTTG+TGG 0.509783 7_1:-66615061 Msa1031860:CDS
CAGCTTAATCTTCCTGCAAA+GGG 0.516823 7_1:+66615265 None:intergenic
TTATTAGTTGTTACATATGG+AGG 0.520920 7_1:-66614682 Msa1031860:CDS
ACCAACAAGGTTAACAACCT+TGG 0.525311 7_1:-66614621 Msa1031860:CDS
TGGTAGTTTCATTAGCTCAT+GGG 0.526316 7_1:-66614984 Msa1031860:CDS
GTGGTTGGTGTTGTCTCTGA+AGG 0.528212 7_1:+66615439 None:intergenic
CCATCAGAATTAACAATACC+AGG 0.531351 7_1:+66614249 None:intergenic
GAGTGACCCACAAGGAAACT+TGG 0.531384 7_1:+66615054 None:intergenic
AAGAGATGAGTGATGATGAA+TGG 0.535532 7_1:+66615338 None:intergenic
AGAGGTAAAGTTGGTATCCA+TGG 0.536783 7_1:+66615374 None:intergenic
TCATGGGCTAAACTTGCTAA+AGG 0.538185 7_1:-66614968 Msa1031860:CDS
ATACCAGGAACCATACAATC+AGG 0.550344 7_1:+66614264 None:intergenic
AAATAATTCTTAGGCAAAGG+TGG 0.552771 7_1:+66614575 None:intergenic
CCAGCTTAATCTTCCTGCAA+AGG 0.553884 7_1:+66615264 None:intergenic
CTTGATGAAGCTAATGGTGA+TGG 0.559185 7_1:-66614207 Msa1031860:CDS
AGGTTGTTAACCTTGTTGGT+TGG 0.562457 7_1:+66614624 None:intergenic
CAACTTCATTGCAACAACAA+AGG 0.563353 7_1:-66615220 Msa1031860:CDS
AAAGTTGGTATCCATGGTTA+GGG 0.563700 7_1:+66615380 None:intergenic
AACATGGTAGTGGCAAAGAG+TGG 0.563812 7_1:+66614791 None:intergenic
CCTTTGCAGGAAGATTAAGC+TGG 0.576850 7_1:-66615264 Msa1031860:CDS
GAGCTTGAGTTGATCACAGA+GGG 0.580856 7_1:+66615402 None:intergenic
GGAAGATTAAGCTGGATCAA+AGG 0.585204 7_1:-66615256 Msa1031860:CDS
GAAAGAGAGAGTGTGGTGGT+TGG 0.587131 7_1:+66615424 None:intergenic
ACATGGTAGTGGCAAAGAGT+GGG 0.588001 7_1:+66614792 None:intergenic
ACAGAGGGAAAGAGAGAGTG+TGG 0.591568 7_1:+66615417 None:intergenic
CAACTCAAGCTCCCTAACCA+TGG 0.599984 7_1:-66615391 Msa1031860:CDS
CCTGTTTCTACAATTAACCA+AGG 0.607399 7_1:+66614604 None:intergenic
GAAAACGTGGTGGTAAATGA+AGG 0.612694 7_1:+66614885 None:intergenic
GAACAAGTTTGTGTCACCGT+AGG 0.630705 7_1:+66614536 None:intergenic
GTAAACTGAACAACCAACAA+AGG 0.642328 7_1:+66615076 None:intergenic
AGCCAACACCAATGAAAACA+AGG 0.649428 7_1:-66614729 Msa1031860:CDS
GAAATTGGAACCAACCAACA+AGG 0.652154 7_1:-66614634 Msa1031860:CDS
AAAAGAAATGGACAATTCGG+TGG 0.653578 7_1:-66614357 Msa1031860:CDS
ACAAAGGAACATCTTCAACT+GGG 0.664068 7_1:+66615092 None:intergenic
CCAAGAGTGAGTGACCCACA+AGG 0.679354 7_1:+66615046 None:intergenic
AAGGTGTAACTATGTATGAA+CGG 0.693375 7_1:+66615458 None:intergenic
ACCAATGAAAACAAGGTACG+AGG 0.701204 7_1:-66614722 Msa1031860:CDS
GAGGGAAAGAGAGAGTGTGG+TGG 0.702222 7_1:+66615420 None:intergenic
AACTCATGATGATGAAAACG+TGG 0.716513 7_1:+66614872 None:intergenic
GTGTAACTATGTATGAACGG+TGG 0.717757 7_1:+66615461 None:intergenic
TCATGATGATGAAAACGTGG+TGG 0.758242 7_1:+66614875 None:intergenic
GGAGCTTGAGTTGATCACAG+AGG 0.762986 7_1:+66615401 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTGCTAAAAGAAA+TGG - chr7_1:66615219-66615238 Msa1031860:CDS 15.0%
!!! TATAATTTTGCTAAAAGAAA+TGG - chr7_1:66615219-66615238 Msa1031860:CDS 15.0%
!!! GATATTGCTTTAAAAGATTT+AGG - chr7_1:66614416-66614435 Msa1031860:intron 20.0%
!!! TAATTTTTGGAACAAGTTTT+TGG + chr7_1:66614466-66614485 None:intergenic 20.0%
!!! AAGTTTTTCAACTTGTTTTT+TGG + chr7_1:66614831-66614850 None:intergenic 20.0%
!!! GATATTGCTTTAAAAGATTT+AGG - chr7_1:66614416-66614435 Msa1031860:intron 20.0%
!!! TAATTTTTGGAACAAGTTTT+TGG + chr7_1:66614466-66614485 None:intergenic 20.0%
!!! AAGTTTTTCAACTTGTTTTT+TGG + chr7_1:66614831-66614850 None:intergenic 20.0%
! AACAAAGTTCTATCATGAAA+TGG + chr7_1:66614671-66614690 None:intergenic 25.0%
!! ATTACTACTATTTTCCCAAA+GGG + chr7_1:66614753-66614772 None:intergenic 25.0%
!! TATTACTACTATTTTCCCAA+AGG + chr7_1:66614754-66614773 None:intergenic 25.0%
!!! TTTTTTGGTGAATTTCAACA+TGG + chr7_1:66614816-66614835 None:intergenic 25.0%
! AGGTTATTAGTTGTTACATA+TGG - chr7_1:66614903-66614922 Msa1031860:CDS 25.0%
! TTATTAGTTGTTACATATGG+AGG - chr7_1:66614906-66614925 Msa1031860:CDS 25.0%
!! CTTTGCCTAAGAATTATTTT+GGG - chr7_1:66615017-66615036 Msa1031860:CDS 25.0%
!!! AGAAGGATATGAATTTGTTA+AGG - chr7_1:66615187-66615206 Msa1031860:CDS 25.0%
!!! GAAGGATATGAATTTGTTAA+GGG - chr7_1:66615188-66615207 Msa1031860:CDS 25.0%
! ATTGTTAATTCTGATGGTAT+TGG - chr7_1:66615345-66615364 Msa1031860:CDS 25.0%
! TATATTCTTGATGAAGCTAA+TGG - chr7_1:66615375-66615394 Msa1031860:CDS 25.0%
! AACAAAGTTCTATCATGAAA+TGG + chr7_1:66614671-66614690 None:intergenic 25.0%
!! ATTACTACTATTTTCCCAAA+GGG + chr7_1:66614753-66614772 None:intergenic 25.0%
!! TATTACTACTATTTTCCCAA+AGG + chr7_1:66614754-66614773 None:intergenic 25.0%
!!! TTTTTTGGTGAATTTCAACA+TGG + chr7_1:66614816-66614835 None:intergenic 25.0%
! AGGTTATTAGTTGTTACATA+TGG - chr7_1:66614903-66614922 Msa1031860:CDS 25.0%
! TTATTAGTTGTTACATATGG+AGG - chr7_1:66614906-66614925 Msa1031860:CDS 25.0%
!! CTTTGCCTAAGAATTATTTT+GGG - chr7_1:66615017-66615036 Msa1031860:CDS 25.0%
!!! AGAAGGATATGAATTTGTTA+AGG - chr7_1:66615187-66615206 Msa1031860:CDS 25.0%
!!! GAAGGATATGAATTTGTTAA+GGG - chr7_1:66615188-66615207 Msa1031860:CDS 25.0%
! ATTGTTAATTCTGATGGTAT+TGG - chr7_1:66615345-66615364 Msa1031860:CDS 25.0%
! TATATTCTTGATGAAGCTAA+TGG - chr7_1:66615375-66615394 Msa1031860:CDS 25.0%
AAGGTGTAACTATGTATGAA+CGG + chr7_1:66614133-66614152 None:intergenic 30.0%
!! AATGGTTTTTGTTTGTGAAG+AGG + chr7_1:66614235-66614254 None:intergenic 30.0%
TGTTGCAATGAAGTTGTAAA+TGG + chr7_1:66614364-66614383 None:intergenic 30.0%
!!! TTTTAAAGCAATATCACACG+TGG + chr7_1:66614411-66614430 None:intergenic 30.0%
! GGGACATCATAGTTAATTTT+TGG + chr7_1:66614479-66614498 None:intergenic 30.0%
ATCATGAAATGGAATCATAC+TGG + chr7_1:66614660-66614679 None:intergenic 30.0%
! TTACTACTATTTTCCCAAAG+GGG + chr7_1:66614752-66614771 None:intergenic 30.0%
AAATAATTCTTAGGCAAAGG+TGG + chr7_1:66615016-66615035 None:intergenic 30.0%
CCAAAATAATTCTTAGGCAA+AGG + chr7_1:66615019-66615038 None:intergenic 30.0%
! CCTTTGCCTAAGAATTATTT+TGG - chr7_1:66615016-66615035 Msa1031860:CDS 30.0%
GCATTCCCAAAATAATTCTT+AGG + chr7_1:66615025-66615044 None:intergenic 30.0%
TGATTATGTAGCAAATCAGA+AGG - chr7_1:66615170-66615189 Msa1031860:CDS 30.0%
GCTAAAAGAAATGGACAATT+CGG - chr7_1:66615228-66615247 Msa1031860:CDS 30.0%
AACCAACAACATACAAATTC+GGG + chr7_1:66615260-66615279 None:intergenic 30.0%
CAACCAACAACATACAAATT+CGG + chr7_1:66615261-66615280 None:intergenic 30.0%
!! TAATTCTGATGGTATTGGTA+AGG - chr7_1:66615350-66615369 Msa1031860:CDS 30.0%
!! GTTGAAGAAGTTGTTTTATG+AGG - chr7_1:66615446-66615465 Msa1031860:CDS 30.0%
!! GAAGTTGTTTTATGAGGATA+TGG - chr7_1:66615452-66615471 Msa1031860:CDS 30.0%
AAGGTGTAACTATGTATGAA+CGG + chr7_1:66614133-66614152 None:intergenic 30.0%
!! AATGGTTTTTGTTTGTGAAG+AGG + chr7_1:66614235-66614254 None:intergenic 30.0%
TGTTGCAATGAAGTTGTAAA+TGG + chr7_1:66614364-66614383 None:intergenic 30.0%
!!! TTTTAAAGCAATATCACACG+TGG + chr7_1:66614411-66614430 None:intergenic 30.0%
! GGGACATCATAGTTAATTTT+TGG + chr7_1:66614479-66614498 None:intergenic 30.0%
ATCATGAAATGGAATCATAC+TGG + chr7_1:66614660-66614679 None:intergenic 30.0%
! TTACTACTATTTTCCCAAAG+GGG + chr7_1:66614752-66614771 None:intergenic 30.0%
AAATAATTCTTAGGCAAAGG+TGG + chr7_1:66615016-66615035 None:intergenic 30.0%
CCAAAATAATTCTTAGGCAA+AGG + chr7_1:66615019-66615038 None:intergenic 30.0%
! CCTTTGCCTAAGAATTATTT+TGG - chr7_1:66615016-66615035 Msa1031860:CDS 30.0%
GCATTCCCAAAATAATTCTT+AGG + chr7_1:66615025-66615044 None:intergenic 30.0%
TGATTATGTAGCAAATCAGA+AGG - chr7_1:66615170-66615189 Msa1031860:CDS 30.0%
GCTAAAAGAAATGGACAATT+CGG - chr7_1:66615228-66615247 Msa1031860:CDS 30.0%
AACCAACAACATACAAATTC+GGG + chr7_1:66615260-66615279 None:intergenic 30.0%
CAACCAACAACATACAAATT+CGG + chr7_1:66615261-66615280 None:intergenic 30.0%
!! TAATTCTGATGGTATTGGTA+AGG - chr7_1:66615350-66615369 Msa1031860:CDS 30.0%
!! GTTGAAGAAGTTGTTTTATG+AGG - chr7_1:66615446-66615465 Msa1031860:CDS 30.0%
!! GAAGTTGTTTTATGAGGATA+TGG - chr7_1:66615452-66615471 Msa1031860:CDS 30.0%
!! AAAGTTGGTATCCATGGTTA+GGG + chr7_1:66614211-66614230 None:intergenic 35.0%
!! TAAAGTTGGTATCCATGGTT+AGG + chr7_1:66614212-66614231 None:intergenic 35.0%
TGTTTGTGAAGAGGTAAAGT+TGG + chr7_1:66614226-66614245 None:intergenic 35.0%
! AAGAGATGAGTGATGATGAA+TGG + chr7_1:66614253-66614272 None:intergenic 35.0%
! ATAGTAGTGAGTGAGTGTTT+TGG + chr7_1:66614303-66614322 None:intergenic 35.0%
CAACTTCATTGCAACAACAA+AGG - chr7_1:66614368-66614387 Msa1031860:CDS 35.0%
ACAAAGGAACATCTTCAACT+GGG + chr7_1:66614499-66614518 None:intergenic 35.0%
AACAAAGGAACATCTTCAAC+TGG + chr7_1:66614500-66614519 None:intergenic 35.0%
AGTTGAAGATGTTCCTTTGT+TGG - chr7_1:66614499-66614518 Msa1031860:CDS 35.0%
GTAAACTGAACAACCAACAA+AGG + chr7_1:66614515-66614534 None:intergenic 35.0%
AGTTTACCAAGTTTCCTTGT+GGG - chr7_1:66614528-66614547 Msa1031860:CDS 35.0%
TGGTAGTTTCATTAGCTCAT+GGG - chr7_1:66614604-66614623 Msa1031860:CDS 35.0%
! AACTCATGATGATGAAAACG+TGG + chr7_1:66614719-66614738 None:intergenic 35.0%
!!! TACCTTGTTTTCATTGGTGT+TGG + chr7_1:66614864-66614883 None:intergenic 35.0%
!!! ACGAGGTTATACTAGTTTTG+AGG - chr7_1:66614883-66614902 Msa1031860:CDS 35.0%
!! CCTGTTTCTACAATTAACCA+AGG + chr7_1:66614987-66615006 None:intergenic 35.0%
CCTTGGTTAATTGTAGAAAC+AGG - chr7_1:66614984-66615003 Msa1031860:CDS 35.0%
!! TGAACAAGCCTTTTGTTATG+TGG - chr7_1:66615089-66615108 Msa1031860:CDS 35.0%
!! AAGCCTTTTGTTATGTGGTT+GGG - chr7_1:66615094-66615113 Msa1031860:CDS 35.0%
TTTCCCAACCACATAACAAA+AGG + chr7_1:66615100-66615119 None:intergenic 35.0%
AGTGAGGGAAGCTATTAAAA+AGG - chr7_1:66615119-66615138 Msa1031860:CDS 35.0%
AAAAGAAATGGACAATTCGG+TGG - chr7_1:66615231-66615250 Msa1031860:CDS 35.0%
CGAATTTGTATGTTGTTGGT+TGG - chr7_1:66615259-66615278 Msa1031860:CDS 35.0%
CCAAAATCGGTCTCATTAAA+CGG + chr7_1:66615294-66615313 None:intergenic 35.0%
!! CGTTTAATGAGACCGATTTT+GGG - chr7_1:66615292-66615311 Msa1031860:CDS 35.0%
CCATCAGAATTAACAATACC+AGG + chr7_1:66615342-66615361 None:intergenic 35.0%
CCTGGTATTGTTAATTCTGA+TGG - chr7_1:66615339-66615358 Msa1031860:CDS 35.0%
!! AAAGTTGGTATCCATGGTTA+GGG + chr7_1:66614211-66614230 None:intergenic 35.0%
!! TAAAGTTGGTATCCATGGTT+AGG + chr7_1:66614212-66614231 None:intergenic 35.0%
TGTTTGTGAAGAGGTAAAGT+TGG + chr7_1:66614226-66614245 None:intergenic 35.0%
! AAGAGATGAGTGATGATGAA+TGG + chr7_1:66614253-66614272 None:intergenic 35.0%
! ATAGTAGTGAGTGAGTGTTT+TGG + chr7_1:66614303-66614322 None:intergenic 35.0%
CAACTTCATTGCAACAACAA+AGG - chr7_1:66614368-66614387 Msa1031860:CDS 35.0%
ACAAAGGAACATCTTCAACT+GGG + chr7_1:66614499-66614518 None:intergenic 35.0%
AACAAAGGAACATCTTCAAC+TGG + chr7_1:66614500-66614519 None:intergenic 35.0%
AGTTGAAGATGTTCCTTTGT+TGG - chr7_1:66614499-66614518 Msa1031860:CDS 35.0%
GTAAACTGAACAACCAACAA+AGG + chr7_1:66614515-66614534 None:intergenic 35.0%
AGTTTACCAAGTTTCCTTGT+GGG - chr7_1:66614528-66614547 Msa1031860:CDS 35.0%
TGGTAGTTTCATTAGCTCAT+GGG - chr7_1:66614604-66614623 Msa1031860:CDS 35.0%
! AACTCATGATGATGAAAACG+TGG + chr7_1:66614719-66614738 None:intergenic 35.0%
!!! TACCTTGTTTTCATTGGTGT+TGG + chr7_1:66614864-66614883 None:intergenic 35.0%
!!! ACGAGGTTATACTAGTTTTG+AGG - chr7_1:66614883-66614902 Msa1031860:CDS 35.0%
!! CCTGTTTCTACAATTAACCA+AGG + chr7_1:66614987-66615006 None:intergenic 35.0%
CCTTGGTTAATTGTAGAAAC+AGG - chr7_1:66614984-66615003 Msa1031860:CDS 35.0%
!! TGAACAAGCCTTTTGTTATG+TGG - chr7_1:66615089-66615108 Msa1031860:CDS 35.0%
!! AAGCCTTTTGTTATGTGGTT+GGG - chr7_1:66615094-66615113 Msa1031860:CDS 35.0%
TTTCCCAACCACATAACAAA+AGG + chr7_1:66615100-66615119 None:intergenic 35.0%
AGTGAGGGAAGCTATTAAAA+AGG - chr7_1:66615119-66615138 Msa1031860:CDS 35.0%
AAAAGAAATGGACAATTCGG+TGG - chr7_1:66615231-66615250 Msa1031860:CDS 35.0%
CGAATTTGTATGTTGTTGGT+TGG - chr7_1:66615259-66615278 Msa1031860:CDS 35.0%
CCAAAATCGGTCTCATTAAA+CGG + chr7_1:66615294-66615313 None:intergenic 35.0%
!! CGTTTAATGAGACCGATTTT+GGG - chr7_1:66615292-66615311 Msa1031860:CDS 35.0%
CCATCAGAATTAACAATACC+AGG + chr7_1:66615342-66615361 None:intergenic 35.0%
CCTGGTATTGTTAATTCTGA+TGG - chr7_1:66615339-66615358 Msa1031860:CDS 35.0%
! CTATGTATGAACGGTGGATT+TGG + chr7_1:66614124-66614143 None:intergenic 40.0%
GTGTAACTATGTATGAACGG+TGG + chr7_1:66614130-66614149 None:intergenic 40.0%
!! AGAGGTAAAGTTGGTATCCA+TGG + chr7_1:66614217-66614236 None:intergenic 40.0%
CAGCTTAATCTTCCTGCAAA+GGG + chr7_1:66614326-66614345 None:intergenic 40.0%
GGAAGATTAAGCTGGATCAA+AGG - chr7_1:66614332-66614351 Msa1031860:CDS 40.0%
CAGTTTACCAAGTTTCCTTG+TGG - chr7_1:66614527-66614546 Msa1031860:CDS 40.0%
CTGGTAGTTTCATTAGCTCA+TGG - chr7_1:66614603-66614622 Msa1031860:CDS 40.0%
!! TCATGGGCTAAACTTGCTAA+AGG - chr7_1:66614620-66614639 Msa1031860:CDS 40.0%
GAAAACGTGGTGGTAAATGA+AGG + chr7_1:66614706-66614725 None:intergenic 40.0%
! TCATGATGATGAAAACGTGG+TGG + chr7_1:66614716-66614735 None:intergenic 40.0%
GGTGAATTTCAACATGGTAG+TGG + chr7_1:66614810-66614829 None:intergenic 40.0%
AGCCAACACCAATGAAAACA+AGG - chr7_1:66614859-66614878 Msa1031860:CDS 40.0%
ACCAATGAAAACAAGGTACG+AGG - chr7_1:66614866-66614885 Msa1031860:CDS 40.0%
!!! ACCTCGTACCTTGTTTTCAT+TGG + chr7_1:66614870-66614889 None:intergenic 40.0%
GTTTGTAAAGTGCGCTTTGA+AGG - chr7_1:66614932-66614951 Msa1031860:CDS 40.0%
!! AAGTGCGCTTTGAAGGAAAT+TGG - chr7_1:66614939-66614958 Msa1031860:CDS 40.0%
GAAATTGGAACCAACCAACA+AGG - chr7_1:66614954-66614973 Msa1031860:CDS 40.0%
AGGTTGTTAACCTTGTTGGT+TGG + chr7_1:66614967-66614986 None:intergenic 40.0%
ACCAACAAGGTTAACAACCT+TGG - chr7_1:66614967-66614986 Msa1031860:CDS 40.0%
ACCAAGGTTGTTAACCTTGT+TGG + chr7_1:66614971-66614990 None:intergenic 40.0%
! TGGGAATGCAACTTTTCCTA+CGG - chr7_1:66615036-66615055 Msa1031860:CDS 40.0%
!! CAAGCCTTTTGTTATGTGGT+TGG - chr7_1:66615093-66615112 Msa1031860:CDS 40.0%
TTATGTGGTTGGGAAAGTGA+GGG - chr7_1:66615104-66615123 Msa1031860:CDS 40.0%
GACCCGAATTTGTATGTTGT+TGG - chr7_1:66615255-66615274 Msa1031860:CDS 40.0%
!! CCGTTTAATGAGACCGATTT+TGG - chr7_1:66615291-66615310 Msa1031860:CDS 40.0%
!! TTAATGAGACCGATTTTGGG+TGG - chr7_1:66615295-66615314 Msa1031860:CDS 40.0%
!! TAATGAGACCGATTTTGGGT+GGG - chr7_1:66615296-66615315 Msa1031860:CDS 40.0%
AAACCTGATTGTATGGTTCC+TGG - chr7_1:66615321-66615340 Msa1031860:CDS 40.0%
ATACCAGGAACCATACAATC+AGG + chr7_1:66615327-66615346 None:intergenic 40.0%
CTTGATGAAGCTAATGGTGA+TGG - chr7_1:66615381-66615400 Msa1031860:CDS 40.0%
! CTATGTATGAACGGTGGATT+TGG + chr7_1:66614124-66614143 None:intergenic 40.0%
GTGTAACTATGTATGAACGG+TGG + chr7_1:66614130-66614149 None:intergenic 40.0%
!! AGAGGTAAAGTTGGTATCCA+TGG + chr7_1:66614217-66614236 None:intergenic 40.0%
CAGCTTAATCTTCCTGCAAA+GGG + chr7_1:66614326-66614345 None:intergenic 40.0%
GGAAGATTAAGCTGGATCAA+AGG - chr7_1:66614332-66614351 Msa1031860:CDS 40.0%
CAGTTTACCAAGTTTCCTTG+TGG - chr7_1:66614527-66614546 Msa1031860:CDS 40.0%
CTGGTAGTTTCATTAGCTCA+TGG - chr7_1:66614603-66614622 Msa1031860:CDS 40.0%
!! TCATGGGCTAAACTTGCTAA+AGG - chr7_1:66614620-66614639 Msa1031860:CDS 40.0%
GAAAACGTGGTGGTAAATGA+AGG + chr7_1:66614706-66614725 None:intergenic 40.0%
! TCATGATGATGAAAACGTGG+TGG + chr7_1:66614716-66614735 None:intergenic 40.0%
GGTGAATTTCAACATGGTAG+TGG + chr7_1:66614810-66614829 None:intergenic 40.0%
AGCCAACACCAATGAAAACA+AGG - chr7_1:66614859-66614878 Msa1031860:CDS 40.0%
ACCAATGAAAACAAGGTACG+AGG - chr7_1:66614866-66614885 Msa1031860:CDS 40.0%
!!! ACCTCGTACCTTGTTTTCAT+TGG + chr7_1:66614870-66614889 None:intergenic 40.0%
GTTTGTAAAGTGCGCTTTGA+AGG - chr7_1:66614932-66614951 Msa1031860:CDS 40.0%
!! AAGTGCGCTTTGAAGGAAAT+TGG - chr7_1:66614939-66614958 Msa1031860:CDS 40.0%
GAAATTGGAACCAACCAACA+AGG - chr7_1:66614954-66614973 Msa1031860:CDS 40.0%
AGGTTGTTAACCTTGTTGGT+TGG + chr7_1:66614967-66614986 None:intergenic 40.0%
ACCAACAAGGTTAACAACCT+TGG - chr7_1:66614967-66614986 Msa1031860:CDS 40.0%
ACCAAGGTTGTTAACCTTGT+TGG + chr7_1:66614971-66614990 None:intergenic 40.0%
! TGGGAATGCAACTTTTCCTA+CGG - chr7_1:66615036-66615055 Msa1031860:CDS 40.0%
!! CAAGCCTTTTGTTATGTGGT+TGG - chr7_1:66615093-66615112 Msa1031860:CDS 40.0%
TTATGTGGTTGGGAAAGTGA+GGG - chr7_1:66615104-66615123 Msa1031860:CDS 40.0%
GACCCGAATTTGTATGTTGT+TGG - chr7_1:66615255-66615274 Msa1031860:CDS 40.0%
!! CCGTTTAATGAGACCGATTT+TGG - chr7_1:66615291-66615310 Msa1031860:CDS 40.0%
!! TTAATGAGACCGATTTTGGG+TGG - chr7_1:66615295-66615314 Msa1031860:CDS 40.0%
!! TAATGAGACCGATTTTGGGT+GGG - chr7_1:66615296-66615315 Msa1031860:CDS 40.0%
AAACCTGATTGTATGGTTCC+TGG - chr7_1:66615321-66615340 Msa1031860:CDS 40.0%
ATACCAGGAACCATACAATC+AGG + chr7_1:66615327-66615346 None:intergenic 40.0%
CTTGATGAAGCTAATGGTGA+TGG - chr7_1:66615381-66615400 Msa1031860:CDS 40.0%
!! GAGCTTGAGTTGATCACAGA+GGG + chr7_1:66614189-66614208 None:intergenic 45.0%
!!! AGTGAGTGTTTTGGAGAGAG+AGG + chr7_1:66614294-66614313 None:intergenic 45.0%
ACTCACTACTATCCCTTTGC+AGG - chr7_1:66614311-66614330 Msa1031860:CDS 45.0%
CCAGCTTAATCTTCCTGCAA+AGG + chr7_1:66614327-66614346 None:intergenic 45.0%
CCTTTGCAGGAAGATTAAGC+TGG - chr7_1:66614324-66614343 Msa1031860:CDS 45.0%
! GTTCTTGATGGTTCTTCTGC+TGG - chr7_1:66614584-66614603 Msa1031860:CDS 45.0%
! CTACTATTTTCCCAAAGGGG+TGG + chr7_1:66614749-66614768 None:intergenic 45.0%
!! ACATGGTAGTGGCAAAGAGT+GGG + chr7_1:66614799-66614818 None:intergenic 45.0%
!! AACATGGTAGTGGCAAAGAG+TGG + chr7_1:66614800-66614819 None:intergenic 45.0%
GAACAAGTTTGTGTCACCGT+AGG + chr7_1:66615055-66615074 None:intergenic 45.0%
GTTATGTGGTTGGGAAAGTG+AGG - chr7_1:66615103-66615122 Msa1031860:CDS 45.0%
!! AATGAGACCGATTTTGGGTG+GGG - chr7_1:66615297-66615316 Msa1031860:CDS 45.0%
!! GAGCTTGAGTTGATCACAGA+GGG + chr7_1:66614189-66614208 None:intergenic 45.0%
!!! AGTGAGTGTTTTGGAGAGAG+AGG + chr7_1:66614294-66614313 None:intergenic 45.0%
ACTCACTACTATCCCTTTGC+AGG - chr7_1:66614311-66614330 Msa1031860:CDS 45.0%
CCAGCTTAATCTTCCTGCAA+AGG + chr7_1:66614327-66614346 None:intergenic 45.0%
CCTTTGCAGGAAGATTAAGC+TGG - chr7_1:66614324-66614343 Msa1031860:CDS 45.0%
! GTTCTTGATGGTTCTTCTGC+TGG - chr7_1:66614584-66614603 Msa1031860:CDS 45.0%
! CTACTATTTTCCCAAAGGGG+TGG + chr7_1:66614749-66614768 None:intergenic 45.0%
!! ACATGGTAGTGGCAAAGAGT+GGG + chr7_1:66614799-66614818 None:intergenic 45.0%
!! AACATGGTAGTGGCAAAGAG+TGG + chr7_1:66614800-66614819 None:intergenic 45.0%
GAACAAGTTTGTGTCACCGT+AGG + chr7_1:66615055-66615074 None:intergenic 45.0%
GTTATGTGGTTGGGAAAGTG+AGG - chr7_1:66615103-66615122 Msa1031860:CDS 45.0%
!! AATGAGACCGATTTTGGGTG+GGG - chr7_1:66615297-66615316 Msa1031860:CDS 45.0%
!! GTGGTTGGTGTTGTCTCTGA+AGG + chr7_1:66614152-66614171 None:intergenic 50.0%
! GAAAGAGAGAGTGTGGTGGT+TGG + chr7_1:66614167-66614186 None:intergenic 50.0%
ACAGAGGGAAAGAGAGAGTG+TGG + chr7_1:66614174-66614193 None:intergenic 50.0%
!! GGAGCTTGAGTTGATCACAG+AGG + chr7_1:66614190-66614209 None:intergenic 50.0%
CAACTCAAGCTCCCTAACCA+TGG - chr7_1:66614197-66614216 Msa1031860:CDS 50.0%
GAGTGACCCACAAGGAAACT+TGG + chr7_1:66614537-66614556 None:intergenic 50.0%
!! ACTCACTCTTGGTCTTGCTC+TGG - chr7_1:66614553-66614572 Msa1031860:CDS 50.0%
!! CTCACTCTTGGTCTTGCTCT+GGG - chr7_1:66614554-66614573 Msa1031860:CDS 50.0%
CTGGGTCGTTCTGTTCTTGA+TGG - chr7_1:66614572-66614591 Msa1031860:CDS 50.0%
! AGTTTTCTCCACCACCCCTT+TGG - chr7_1:66614735-66614754 Msa1031860:CDS 50.0%
! GTTTTCTCCACCACCCCTTT+GGG - chr7_1:66614736-66614755 Msa1031860:CDS 50.0%
! CTATTTTCCCAAAGGGGTGG+TGG + chr7_1:66614746-66614765 None:intergenic 50.0%
!! ATGAGACCGATTTTGGGTGG+GGG - chr7_1:66615298-66615317 Msa1031860:CDS 50.0%
AGGTTTCCCCCACCCAAAAT+CGG + chr7_1:66615307-66615326 None:intergenic 50.0%
GTGGGGGAAACCTGATTGTA+TGG - chr7_1:66615314-66615333 Msa1031860:CDS 50.0%
!! GTGGTTGGTGTTGTCTCTGA+AGG + chr7_1:66614152-66614171 None:intergenic 50.0%
! GAAAGAGAGAGTGTGGTGGT+TGG + chr7_1:66614167-66614186 None:intergenic 50.0%
ACAGAGGGAAAGAGAGAGTG+TGG + chr7_1:66614174-66614193 None:intergenic 50.0%
!! GGAGCTTGAGTTGATCACAG+AGG + chr7_1:66614190-66614209 None:intergenic 50.0%
CAACTCAAGCTCCCTAACCA+TGG - chr7_1:66614197-66614216 Msa1031860:CDS 50.0%
GAGTGACCCACAAGGAAACT+TGG + chr7_1:66614537-66614556 None:intergenic 50.0%
!! ACTCACTCTTGGTCTTGCTC+TGG - chr7_1:66614553-66614572 Msa1031860:CDS 50.0%
!! CTCACTCTTGGTCTTGCTCT+GGG - chr7_1:66614554-66614573 Msa1031860:CDS 50.0%
CTGGGTCGTTCTGTTCTTGA+TGG - chr7_1:66614572-66614591 Msa1031860:CDS 50.0%
! AGTTTTCTCCACCACCCCTT+TGG - chr7_1:66614735-66614754 Msa1031860:CDS 50.0%
! GTTTTCTCCACCACCCCTTT+GGG - chr7_1:66614736-66614755 Msa1031860:CDS 50.0%
! CTATTTTCCCAAAGGGGTGG+TGG + chr7_1:66614746-66614765 None:intergenic 50.0%
!! ATGAGACCGATTTTGGGTGG+GGG - chr7_1:66615298-66615317 Msa1031860:CDS 50.0%
AGGTTTCCCCCACCCAAAAT+CGG + chr7_1:66615307-66615326 None:intergenic 50.0%
GTGGGGGAAACCTGATTGTA+TGG - chr7_1:66615314-66615333 Msa1031860:CDS 50.0%
! GAGGGAAAGAGAGAGTGTGG+TGG + chr7_1:66614171-66614190 None:intergenic 55.0%
CCAAGAGTGAGTGACCCACA+AGG + chr7_1:66614545-66614564 None:intergenic 55.0%
CCTTGTGGGTCACTCACTCT+TGG - chr7_1:66614542-66614561 Msa1031860:CDS 55.0%
! GAGGGAAAGAGAGAGTGTGG+TGG + chr7_1:66614171-66614190 None:intergenic 55.0%
CCAAGAGTGAGTGACCCACA+AGG + chr7_1:66614545-66614564 None:intergenic 55.0%
CCTTGTGGGTCACTCACTCT+TGG - chr7_1:66614542-66614561 Msa1031860:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66614110 66615500 66614110 ID=Msa1031860;Name=Msa1031860
chr7_1 mRNA 66614110 66615500 66614110 ID=Msa1031860-mRNA-1;Parent=Msa1031860;Name=Msa1031860-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|2|0|433
chr7_1 exon 66614491 66615500 66614491 ID=Msa1031860-mRNA-1:exon:15059;Parent=Msa1031860-mRNA-1
chr7_1 exon 66614110 66614401 66614110 ID=Msa1031860-mRNA-1:exon:15058;Parent=Msa1031860-mRNA-1
chr7_1 CDS 66614491 66615500 66614491 ID=Msa1031860-mRNA-1:cds;Parent=Msa1031860-mRNA-1
chr7_1 CDS 66614110 66614401 66614110 ID=Msa1031860-mRNA-1:cds;Parent=Msa1031860-mRNA-1
Gene Sequence

>Msa1031860

ATGGTGAACATCCAAATCCACCGTTCATACATAGTTACACCTTCAGAGACAACACCAACCACCACACTCTCTCTTTCCCTCTGTGATCAACTCAAGCTCCCTAACCATGGATACCAACTTTACCTCTTCACAAACAAAAACCATTCATCATCACTCATCTCTTCAACAAACATTCTCATAACCTCTCTCTCCAAAACACTCACTCACTACTATCCCTTTGCAGGAAGATTAAGCTGGATCAAAGGTAAAAACCATTTACAACTTCATTGCAACAACAAAGGTGTTCAATTCTTAGAAGCCACGTGTGATATTGCTTTAAAAGATTTAGGTAGTTTTGATTCTACACATGTTGTCCAAAAACTTGTTCCAAAAATTAACTATGATGTCCCAGTTGAAGATGTTCCTTTGTTGGTTGTTCAGTTTACCAAGTTTCCTTGTGGGTCACTCACTCTTGGTCTTGCTCTGGGTCGTTCTGTTCTTGATGGTTCTTCTGCTGGTAGTTTCATTAGCTCATGGGCTAAACTTGCTAAAGGTGAGAGTTTAGATTCCAGTATGATTCCATTTCATGATAGAACTTTGTTAGATTCAAAGATCCTTCATTTACCACCACGTTTTCATCATCATGAGTTTTCTCCACCACCCCTTTGGGAAAATAGTAGTAATAACTCAACAATTGTGAGTAAAAACCCACTCTTTGCCACTACCATGTTGAAATTCACCAAAAAACAAGTTGAAAAACTTAAGAACAAAGCCAACACCAATGAAAACAAGGTACGAGGTTATACTAGTTTTGAGGTTATTAGTTGTTACATATGGAGGTGTGTTTGTAAAGTGCGCTTTGAAGGAAATTGGAACCAACCAACAAGGTTAACAACCTTGGTTAATTGTAGAAACAGGTTGAATCCACCTTTGCCTAAGAATTATTTTGGGAATGCAACTTTTCCTACGGTGACACAAACTTGTTCATTTGATGATGTTGTGAACAAGCCTTTTGTTATGTGGTTGGGAAAGGACAAGTTTTATAATTTTGCTAAAAGAAATGGACAATTCGGTGGTGACCCGAATTTGTATGTTGTTGGTTGGACTAATTTTCCGTTTAATGAGACCGATTTTGGGTGGGGGAAACCTGATTGTATGGTTCCTGGTATTGTTAATTCTGATGGTATTGGTAAGGCTTATATTCTTGATGAAGCTAATGGTGATGGCTTTGTTGTAAGTGTTTGTTTGCAATCTTTTCATATAGATGCGTTGAAGAAGTTGTTTTATGAGGATATGGAGATGATCACTAGTTCCAAACTGTGA
Protein sequence

>Msa1031860

MVNIQIHRSYIVTPSETTPTTTLSLSLCDQLKLPNHGYQLYLFTNKNHSSSLISSTNILITSLSKTLTHYYPFAGRLSWIKGKNHLQLHCNNKGVQFLEATCDIALKDLGSFDSTHVVQKLVPKINYDVPVEDVPLLVVQFTKFPCGSLTLGLALGRSVLDGSSAGSFISSWAKLAKGESLDSSMIPFHDRTLLDSKILHLPPRFHHHEFSPPPLWENSSNNSTIVSKNPLFATTMLKFTKKQVEKLKNKANTNENKVRGYTSFEVISCYIWRCVCKVRFEGNWNQPTRLTTLVNCRNRLNPPLPKNYFGNATFPTVTQTCSFDDVVNKPFVMWLGKDKFYNFAKRNGQFGGDPNLYVVGWTNFPFNETDFGWGKPDCMVPGIVNSDGIGKAYILDEANGDGFVVSVCLQSFHIDALKKLFYEDMEMITSSKL*