Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674580 | XP_003605651.1 | 93.548 | 186 | 11 | 1 | 1 | 185 | 1 | 186 | 4.21e-125 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674580 | sp|Q9FVV7|RD521_ARATH | 79.104 | 134 | 27 | 1 | 51 | 184 | 43 | 175 | 1.19e-78 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674580 | G7JRC9 | 93.548 | 186 | 11 | 1 | 1 | 185 | 1 | 186 | 2.01e-125 | 360 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0674580 | 0.800328 | 1.517419e-48 | -8.615850e-47 |
| Msa0015390 | Msa0674580 | 0.805801 | 1.120014e-49 | -8.615850e-47 |
| Msa0017510 | Msa0674580 | 0.849360 | 3.400010e-60 | -8.615850e-47 |
| Msa0027230 | Msa0674580 | 0.802656 | 5.059374e-49 | -8.615850e-47 |
| Msa0028640 | Msa0674580 | 0.833410 | 5.419719e-56 | -8.615850e-47 |
| Msa0029270 | Msa0674580 | 0.810277 | 1.248616e-50 | -8.615850e-47 |
| Msa0040450 | Msa0674580 | 0.807439 | 5.051657e-50 | -8.615850e-47 |
| Msa0054480 | Msa0674580 | 0.809395 | 1.933141e-50 | -8.615850e-47 |
| Msa0061080 | Msa0674580 | 0.825773 | 3.903515e-54 | -8.615850e-47 |
| Msa0075220 | Msa0674580 | 0.804172 | 2.453623e-49 | -8.615850e-47 |
| Msa0078900 | Msa0674580 | 0.802724 | 4.898549e-49 | -8.615850e-47 |
| Msa0086650 | Msa0674580 | 0.801571 | 8.455797e-49 | -8.615850e-47 |
| Msa0089630 | Msa0674580 | 0.805701 | 1.175467e-49 | -8.615850e-47 |
| Msa0090360 | Msa0674580 | 0.803478 | 3.420467e-49 | -8.615850e-47 |
| Msa0110970 | Msa0674580 | 0.824335 | 8.535685e-54 | -8.615850e-47 |
| Msa0607050 | Msa0674580 | 0.822221 | 2.659769e-53 | -8.615850e-47 |
| Msa0610430 | Msa0674580 | 0.807809 | 4.215606e-50 | -8.615850e-47 |
| Msa0615710 | Msa0674580 | 0.812376 | 4.372938e-51 | -8.615850e-47 |
| Msa0625720 | Msa0674580 | 0.814805 | 1.277743e-51 | -8.615850e-47 |
| Msa0657970 | Msa0674580 | 0.817570 | 3.079957e-52 | -8.615850e-47 |
| Msa0663390 | Msa0674580 | 0.832270 | 1.040147e-55 | -8.615850e-47 |
| Msa0674580 | Msa0682840 | 0.818859 | 1.573106e-52 | -8.615850e-47 |
| Msa0674580 | Msa0683510 | 0.801170 | 1.021440e-48 | -8.615850e-47 |
| Msa0674580 | Msa0683730 | 0.800207 | 1.606152e-48 | -8.615850e-47 |
| Msa0674580 | Msa0690150 | 0.821172 | 4.651328e-53 | -8.615850e-47 |
| Msa0674580 | Msa0692040 | -0.803383 | 3.578232e-49 | -8.615850e-47 |
| Msa0674580 | Msa0708520 | 0.827256 | 1.729912e-54 | -8.615850e-47 |
| Msa0674580 | Msa0729720 | 0.804688 | 1.916194e-49 | -8.615850e-47 |
| Msa0674580 | Msa0730430 | 0.805993 | 1.020748e-49 | -8.615850e-47 |
| Msa0674580 | Msa0741240 | 0.802289 | 6.019654e-49 | -8.615850e-47 |
| Msa0674580 | Msa0743720 | 0.818862 | 1.570297e-52 | -8.615850e-47 |
| Msa0674580 | Msa0787260 | 0.811556 | 6.601199e-51 | -8.615850e-47 |
| Msa0674580 | Msa0793800 | 0.815429 | 9.289392e-52 | -8.615850e-47 |
| Msa0674580 | Msa0801760 | 0.802226 | 6.202253e-49 | -8.615850e-47 |
| Msa0674580 | Msa0803890 | 0.811646 | 6.307440e-51 | -8.615850e-47 |
| Msa0674580 | Msa0808270 | 0.808746 | 2.661970e-50 | -8.615850e-47 |
| Msa0674580 | Msa0828560 | 0.806303 | 8.782313e-50 | -8.615850e-47 |
| Msa0674580 | Msa0838580 | 0.810099 | 1.364131e-50 | -8.615850e-47 |
| Msa0674580 | Msa0843780 | -0.809407 | 1.921742e-50 | -8.615850e-47 |
| Msa0674580 | Msa0861870 | 0.814616 | 1.406807e-51 | -8.615850e-47 |
| Msa0674580 | Msa0871270 | 0.837802 | 4.192359e-57 | -8.615850e-47 |
| Msa0674580 | Msa0876190 | 0.800936 | 1.140731e-48 | -8.615850e-47 |
| Msa0674580 | Msa0880140 | 0.844826 | 5.943649e-59 | -8.615850e-47 |
| Msa0674580 | Msa0884410 | -0.804205 | 2.415115e-49 | -8.615850e-47 |
| Msa0674580 | Msa0888530 | 0.828932 | 6.828645e-55 | -8.615850e-47 |
| Msa0674580 | Msa0902760 | 0.806469 | 8.103020e-50 | -8.615850e-47 |
| Msa0674580 | Msa0938220 | 0.833359 | 5.579253e-56 | -8.615850e-47 |
| Msa0674580 | Msa0959360 | 0.802027 | 6.815663e-49 | -8.615850e-47 |
| Msa0674580 | Msa0963270 | 0.807855 | 4.122213e-50 | -8.615850e-47 |
| Msa0674580 | Msa0968590 | 0.806442 | 8.210396e-50 | -8.615850e-47 |
| Msa0674580 | Msa0968680 | 0.839058 | 1.988134e-57 | -8.615850e-47 |
| Msa0674580 | Msa0975340 | 0.817428 | 3.314482e-52 | -8.615850e-47 |
| Msa0674580 | Msa0993290 | 0.854198 | 1.443576e-61 | -8.615850e-47 |
| Msa0674580 | Msa0993600 | 0.849924 | 2.366340e-60 | -8.615850e-47 |
| Msa0674580 | Msa1004550 | 0.815354 | 9.653032e-52 | -8.615850e-47 |
| Msa0674580 | Msa1004600 | 0.804323 | 2.283002e-49 | -8.615850e-47 |
| Msa0674580 | Msa1013400 | 0.817237 | 3.658735e-52 | -8.615850e-47 |
| Msa0674580 | Msa1014540 | 0.806929 | 6.478476e-50 | -8.615850e-47 |
| Msa0674580 | Msa1019000 | 0.828511 | 8.634928e-55 | -8.615850e-47 |
| Msa0674580 | Msa1030970 | 0.810256 | 1.261805e-50 | -8.615850e-47 |
| Msa0674580 | Msa1031860 | 0.813672 | 2.273780e-51 | -8.615850e-47 |
| Msa0674580 | Msa1040400 | 0.800928 | 1.145143e-48 | -8.615850e-47 |
| Msa0674580 | Msa1066490 | 0.803654 | 3.143879e-49 | -8.615850e-47 |
| Msa0674580 | Msa1075220 | -0.800260 | 1.566357e-48 | -8.615850e-47 |
| Msa0674580 | Msa1075540 | 0.821107 | 4.813103e-53 | -8.615850e-47 |
| Msa0674580 | Msa1079590 | 0.812660 | 3.792011e-51 | -8.615850e-47 |
| Msa0674580 | Msa1082500 | 0.824119 | 9.590454e-54 | -8.615850e-47 |
| Msa0674580 | Msa1085200 | 0.845796 | 3.247167e-59 | -8.615850e-47 |
| Msa0674580 | Msa1093530 | 0.809608 | 1.739416e-50 | -8.615850e-47 |
| Msa0674580 | Msa1100050 | 0.806207 | 9.202043e-50 | -8.615850e-47 |
| Msa0674580 | Msa1106700 | 0.800460 | 1.426349e-48 | -8.615850e-47 |
| Msa0674580 | Msa1121440 | 0.817823 | 2.700681e-52 | -8.615850e-47 |
| Msa0674580 | Msa1125760 | 0.804555 | 2.041748e-49 | -8.615850e-47 |
| Msa0674580 | Msa1140210 | 0.804734 | 1.874216e-49 | -8.615850e-47 |
| Msa0674580 | Msa1151910 | 0.807628 | 4.607512e-50 | -8.615850e-47 |
| Msa0674580 | Msa1154280 | 0.821180 | 4.629526e-53 | -8.615850e-47 |
| Msa0674580 | Msa1167340 | 0.803144 | 4.010802e-49 | -8.615850e-47 |
| Msa0674580 | Msa1168160 | 0.811178 | 7.971000e-51 | -8.615850e-47 |
| Msa0674580 | Msa1187840 | 0.801636 | 8.198718e-49 | -8.615850e-47 |
| Msa0674580 | Msa1189070 | 0.820453 | 6.806055e-53 | -8.615850e-47 |
| Msa0674580 | Msa1190400 | 0.810490 | 1.123286e-50 | -8.615850e-47 |
| Msa0674580 | Msa1209460 | 0.827262 | 1.723913e-54 | -8.615850e-47 |
| Msa0674580 | Msa1211890 | 0.800847 | 1.189406e-48 | -8.615850e-47 |
| Msa0674580 | Msa1212940 | 0.826639 | 2.428768e-54 | -8.615850e-47 |
| Msa0674580 | Msa1222970 | 0.808333 | 3.260923e-50 | -8.615850e-47 |
| Msa0674580 | Msa1225700 | 0.806643 | 7.446619e-50 | -8.615850e-47 |
| Msa0674580 | Msa1233910 | 0.816699 | 4.833987e-52 | -8.615850e-47 |
| Msa0674580 | Msa1238930 | 0.802858 | 4.595049e-49 | -8.615850e-47 |
| Msa0674580 | Msa1242220 | 0.805987 | 1.023712e-49 | -8.615850e-47 |
| Msa0674580 | Msa1242230 | 0.804150 | 2.480601e-49 | -8.615850e-47 |
| Msa0674580 | Msa1242670 | 0.803949 | 2.731083e-49 | -8.615850e-47 |
| Msa0674580 | Msa1244610 | 0.801294 | 9.635673e-49 | -8.615850e-47 |
| Msa0674580 | Msa1271990 | 0.802242 | 6.157010e-49 | -8.615850e-47 |
| Msa0674580 | Msa1279210 | 0.803309 | 3.707373e-49 | -8.615850e-47 |
| Msa0674580 | Msa1283840 | 0.804274 | 2.337519e-49 | -8.615850e-47 |
| Msa0674580 | Msa1283860 | 0.829361 | 5.373938e-55 | -8.615850e-47 |
| Msa0674580 | Msa1284260 | 0.803901 | 2.794180e-49 | -8.615850e-47 |
| Msa0674580 | Msa1284550 | 0.818420 | 1.978765e-52 | -8.615850e-47 |
| Msa0674580 | Msa1284680 | 0.807637 | 4.587251e-50 | -8.615850e-47 |
| Msa0674580 | Msa1292760 | 0.816119 | 6.518523e-52 | -8.615850e-47 |
| Msa0674580 | Msa1303250 | 0.803701 | 3.075166e-49 | -8.615850e-47 |
| Msa0674580 | Msa1305340 | 0.809713 | 1.651779e-50 | -8.615850e-47 |
| Msa0674580 | Msa1308380 | 0.804575 | 2.022932e-49 | -8.615850e-47 |
| Msa0674580 | Msa1322860 | 0.807043 | 6.129074e-50 | -8.615850e-47 |
| Msa0674580 | Msa1324500 | 0.813445 | 2.549937e-51 | -8.615850e-47 |
| Msa0674580 | Msa1327050 | 0.808019 | 3.803938e-50 | -8.615850e-47 |
| Msa0674580 | Msa1327680 | 0.803468 | 3.436336e-49 | -8.615850e-47 |
| Msa0674580 | Msa1330410 | 0.817010 | 4.116692e-52 | -8.615850e-47 |
| Msa0674580 | Msa1346370 | 0.815871 | 7.404650e-52 | -8.615850e-47 |
| Msa0674580 | Msa1353060 | 0.800340 | 1.509152e-48 | -8.615850e-47 |
| Msa0674580 | Msa1359040 | 0.804860 | 1.763999e-49 | -8.615850e-47 |
| Msa0674580 | Msa1367080 | 0.812166 | 4.861190e-51 | -8.615850e-47 |
| Msa0674580 | Msa1367370 | 0.806657 | 7.396540e-50 | -8.615850e-47 |
| Msa0674580 | Msa1370070 | -0.811823 | 5.774588e-51 | -8.615850e-47 |
| Msa0674580 | Msa1372760 | 0.822521 | 2.265706e-53 | -8.615850e-47 |
| Msa0674580 | Msa1375560 | 0.816356 | 5.767721e-52 | -8.615850e-47 |
| Msa0674580 | Msa1386780 | 0.823277 | 1.510305e-53 | -8.615850e-47 |
| Msa0674580 | Msa1409870 | 0.808514 | 2.983600e-50 | -8.615850e-47 |
| Msa0674580 | Msa1409880 | 0.817931 | 2.553073e-52 | -8.615850e-47 |
| Msa0674580 | Msa1416150 | 0.802200 | 6.280976e-49 | -8.615850e-47 |
| Msa0674580 | Msa1434200 | 0.937990 | 1.407164e-98 | -8.615850e-47 |
| Msa0674580 | Msa1443110 | 0.806481 | 8.056051e-50 | -8.615850e-47 |
| Msa0674580 | Msa1445610 | -0.808505 | 2.996630e-50 | -8.615850e-47 |
| Msa0674580 | Msa1446830 | 0.802070 | 6.679575e-49 | -8.615850e-47 |
| Msa0674580 | Msa1457910 | 0.803083 | 4.128507e-49 | -8.615850e-47 |
| Msa0674580 | Msa1460020 | 0.801470 | 8.869168e-49 | -8.615850e-47 |
| Msa0674580 | Msa1464810 | 0.824143 | 9.470023e-54 | -8.615850e-47 |
| Msa0674580 | Msa1464940 | 0.813799 | 2.131924e-51 | -8.615850e-47 |
| Msa0674580 | Msa1466540 | 0.819401 | 1.184352e-52 | -8.615850e-47 |
| Msa0124060 | Msa0674580 | 0.800469 | 1.420711e-48 | -8.615850e-47 |
| Msa0126610 | Msa0674580 | 0.807094 | 5.977272e-50 | -8.615850e-47 |
| Msa0127050 | Msa0674580 | 0.813313 | 2.726609e-51 | -8.615850e-47 |
| Msa0136070 | Msa0674580 | 0.810342 | 1.209059e-50 | -8.615850e-47 |
| Msa0157290 | Msa0674580 | 0.849255 | 3.635643e-60 | -8.615850e-47 |
| Msa0160550 | Msa0674580 | 0.852413 | 4.692454e-61 | -8.615850e-47 |
| Msa0168500 | Msa0674580 | 0.810300 | 1.234735e-50 | -8.615850e-47 |
| Msa0169310 | Msa0674580 | 0.814759 | 1.308164e-51 | -8.615850e-47 |
| Msa0171540 | Msa0674580 | 0.817436 | 3.301380e-52 | -8.615850e-47 |
| Msa0182680 | Msa0674580 | 0.800304 | 1.534584e-48 | -8.615850e-47 |
| Msa0184040 | Msa0674580 | 0.800777 | 1.229153e-48 | -8.615850e-47 |
| Msa0189290 | Msa0674580 | 0.806626 | 7.507040e-50 | -8.615850e-47 |
| Msa0192510 | Msa0674580 | 0.803787 | 2.950547e-49 | -8.615850e-47 |
| Msa0195000 | Msa0674580 | 0.804828 | 1.790637e-49 | -8.615850e-47 |
| Msa0200260 | Msa0674580 | 0.810158 | 1.324447e-50 | -8.615850e-47 |
| Msa0202950 | Msa0674580 | 0.801969 | 7.005941e-49 | -8.615850e-47 |
| Msa0216910 | Msa0674580 | 0.806692 | 7.271028e-50 | -8.615850e-47 |
| Msa0220720 | Msa0674580 | 0.807436 | 5.060205e-50 | -8.615850e-47 |
| Msa0231650 | Msa0674580 | 0.806416 | 8.312455e-50 | -8.615850e-47 |
| Msa0376350 | Msa0674580 | 0.821930 | 3.107776e-53 | -8.615850e-47 |
| Msa0379640 | Msa0674580 | 0.808331 | 3.264841e-50 | -8.615850e-47 |
| Msa0380740 | Msa0674580 | 0.800072 | 1.711026e-48 | -8.615850e-47 |
| Msa0398710 | Msa0674580 | 0.811266 | 7.629535e-51 | -8.615850e-47 |
| Msa0402650 | Msa0674580 | 0.817428 | 3.315289e-52 | -8.615850e-47 |
| Msa0410650 | Msa0674580 | 0.843049 | 1.779413e-58 | -8.615850e-47 |
| Msa0417270 | Msa0674580 | 0.823385 | 1.425267e-53 | -8.615850e-47 |
| Msa0417880 | Msa0674580 | 0.800313 | 1.527987e-48 | -8.615850e-47 |
| Msa0422850 | Msa0674580 | 0.806779 | 6.969760e-50 | -8.615850e-47 |
| Msa0422930 | Msa0674580 | 0.810290 | 1.240313e-50 | -8.615850e-47 |
| Msa0423040 | Msa0674580 | 0.803158 | 3.984407e-49 | -8.615850e-47 |
| Msa0424790 | Msa0674580 | 0.820214 | 7.719497e-53 | -8.615850e-47 |
| Msa0428590 | Msa0674580 | 0.808291 | 3.329692e-50 | -8.615850e-47 |
| Msa0433640 | Msa0674580 | 0.808409 | 3.141571e-50 | -8.615850e-47 |
| Msa0436490 | Msa0674580 | -0.803688 | 3.093443e-49 | -8.615850e-47 |
| Msa0440400 | Msa0674580 | 0.804208 | 2.412200e-49 | -8.615850e-47 |
| Msa0440750 | Msa0674580 | 0.802839 | 4.637208e-49 | -8.615850e-47 |
| Msa0449210 | Msa0674580 | 0.809390 | 1.937961e-50 | -8.615850e-47 |
| Msa0466390 | Msa0674580 | 0.802751 | 4.834379e-49 | -8.615850e-47 |
| Msa0467060 | Msa0674580 | 0.802538 | 5.350911e-49 | -8.615850e-47 |
| Msa0471800 | Msa0674580 | 0.801782 | 7.655518e-49 | -8.615850e-47 |
| Msa0479170 | Msa0674580 | 0.811655 | 6.280331e-51 | -8.615850e-47 |
| Msa0479660 | Msa0674580 | 0.828760 | 7.516151e-55 | -8.615850e-47 |
| Msa0479970 | Msa0674580 | 0.808992 | 2.357974e-50 | -8.615850e-47 |
| Msa0480980 | Msa0674580 | 0.815168 | 1.061536e-51 | -8.615850e-47 |
| Msa0481530 | Msa0674580 | 0.831812 | 1.349831e-55 | -8.615850e-47 |
| Msa0243100 | Msa0674580 | 0.824155 | 9.405542e-54 | -8.615850e-47 |
| Msa0244810 | Msa0674580 | 0.811008 | 8.679933e-51 | -8.615850e-47 |
| Msa0244860 | Msa0674580 | 0.808269 | 3.364392e-50 | -8.615850e-47 |
| Msa0249690 | Msa0674580 | 0.803318 | 3.691361e-49 | -8.615850e-47 |
| Msa0259500 | Msa0674580 | 0.810903 | 9.145039e-51 | -8.615850e-47 |
| Msa0262340 | Msa0674580 | 0.807745 | 4.350862e-50 | -8.615850e-47 |
| Msa0264150 | Msa0674580 | 0.803696 | 3.082324e-49 | -8.615850e-47 |
| Msa0272690 | Msa0674580 | 0.813911 | 2.014079e-51 | -8.615850e-47 |
| Msa0283450 | Msa0674580 | 0.809416 | 1.913051e-50 | -8.615850e-47 |
| Msa0284420 | Msa0674580 | 0.805522 | 1.281774e-49 | -8.615850e-47 |
| Msa0287650 | Msa0674580 | 0.812534 | 4.040092e-51 | -8.615850e-47 |
| Msa0292400 | Msa0674580 | 0.811816 | 5.792444e-51 | -8.615850e-47 |
| Msa0297050 | Msa0674580 | 0.804738 | 1.870481e-49 | -8.615850e-47 |
| Msa0309750 | Msa0674580 | 0.802297 | 5.997048e-49 | -8.615850e-47 |
| Msa0309770 | Msa0674580 | 0.801145 | 1.033793e-48 | -8.615850e-47 |
| Msa0332000 | Msa0674580 | 0.806125 | 9.572607e-50 | -8.615850e-47 |
| Msa0336420 | Msa0674580 | 0.839423 | 1.598946e-57 | -8.615850e-47 |
| Msa0337620 | Msa0674580 | 0.826436 | 2.715847e-54 | -8.615850e-47 |
| Msa0341050 | Msa0674580 | 0.812504 | 4.101083e-51 | -8.615850e-47 |
| Msa0341540 | Msa0674580 | 0.814544 | 1.459330e-51 | -8.615850e-47 |
| Msa0357340 | Msa0674580 | 0.805668 | 1.194407e-49 | -8.615850e-47 |
| Msa0487800 | Msa0674580 | 0.802488 | 5.478493e-49 | -8.615850e-47 |
| Msa0497490 | Msa0674580 | 0.816194 | 6.270750e-52 | -8.615850e-47 |
| Msa0498060 | Msa0674580 | 0.811949 | 5.419976e-51 | -8.615850e-47 |
| Msa0501460 | Msa0674580 | 0.809996 | 1.435290e-50 | -8.615850e-47 |
| Msa0507680 | Msa0674580 | 0.839960 | 1.159007e-57 | -8.615850e-47 |
| Msa0509610 | Msa0674580 | 0.808160 | 3.549060e-50 | -8.615850e-47 |
| Msa0516170 | Msa0674580 | 0.815281 | 1.002015e-51 | -8.615850e-47 |
| Msa0521540 | Msa0674580 | 0.804466 | 2.131493e-49 | -8.615850e-47 |
| Msa0523460 | Msa0674580 | 0.809618 | 1.730957e-50 | -8.615850e-47 |
| Msa0524190 | Msa0674580 | 0.805816 | 1.111842e-49 | -8.615850e-47 |
| Msa0529890 | Msa0674580 | 0.814592 | 1.424317e-51 | -8.615850e-47 |
| Msa0547320 | Msa0674580 | 0.805489 | 1.302211e-49 | -8.615850e-47 |
| Msa0547890 | Msa0674580 | 0.817485 | 3.217737e-52 | -8.615850e-47 |
| Msa0548170 | Msa0674580 | 0.810026 | 1.414370e-50 | -8.615850e-47 |
| Msa0569200 | Msa0674580 | 0.818840 | 1.589211e-52 | -8.615850e-47 |
| Msa0569500 | Msa0674580 | 0.805600 | 1.234301e-49 | -8.615850e-47 |
| Msa0574890 | Msa0674580 | 0.807883 | 4.066229e-50 | -8.615850e-47 |
| Msa0581760 | Msa0674580 | 0.806812 | 6.857792e-50 | -8.615850e-47 |
| Msa0585300 | Msa0674580 | 0.812363 | 4.402663e-51 | -8.615850e-47 |
| Msa0585560 | Msa0674580 | 0.827227 | 1.757434e-54 | -8.615850e-47 |
| Msa0598860 | Msa0674580 | 0.803696 | 3.081240e-49 | -8.615850e-47 |
| Msa0602240 | Msa0674580 | 0.820065 | 8.352865e-53 | -8.615850e-47 |
| Msa0602250 | Msa0674580 | 0.820012 | 8.586955e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674580 | MtrunA17_Chr4g0017421 | 93.548 | 186 | 11 | 1 | 1 | 185 | 1 | 186 | 3.87e-129 | 360 |
| Msa0674580 | MtrunA17_Chr6g0449001 | 50.000 | 130 | 62 | 2 | 58 | 185 | 81 | 209 | 1.18e-39 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0674580 | AT1G71310.2 | 79.104 | 134 | 27 | 1 | 51 | 184 | 43 | 175 | 1.21e-79 | 234 |
| Msa0674580 | AT1G71310.1 | 79.104 | 134 | 27 | 1 | 51 | 184 | 43 | 175 | 1.21e-79 | 234 |
| Msa0674580 | AT1G71310.3 | 74.444 | 90 | 22 | 1 | 51 | 140 | 43 | 131 | 1.63e-47 | 153 |
| Msa0674580 | AT5G47870.1 | 52.985 | 134 | 52 | 3 | 55 | 182 | 71 | 199 | 4.33e-43 | 142 |
Find 41 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTATTTCTCTAGATATTT+AGG | 0.082156 | 4_4:-22038067 | Msa0674580:intron |
| GTTTACCGAGTTACTCTTTA+TGG | 0.205215 | 4_4:-22040440 | Msa0674580:CDS |
| GATATGAAACAGTTAAATTA+TGG | 0.240393 | 4_4:-22037625 | Msa0674580:three_prime_UTR |
| ATTATTTCTCTAGATATTTA+GGG | 0.255978 | 4_4:-22038066 | Msa0674580:intron |
| AGCTTGCGCACGCTTTGGAC+TGG | 0.266868 | 4_4:-22037964 | Msa0674580:CDS |
| TCAACAGATGATACAAATTA+TGG | 0.311066 | 4_4:-22038026 | Msa0674580:CDS |
| TCATTTCGTTTCCTACTAGA+TGG | 0.325041 | 4_4:+22037697 | None:intergenic |
| GCTTGCGCACGCTTTGGACT+GGG | 0.330431 | 4_4:-22037963 | Msa0674580:CDS |
| ATGGTTAGTTACCACTTAAA+AGG | 0.340122 | 4_4:-22037824 | Msa0674580:three_prime_UTR |
| TTCTCTGTTTGGTTCATGAT+AGG | 0.341734 | 4_4:-22037758 | Msa0674580:three_prime_UTR |
| ATGACGCTTCTTCATGATAA+AGG | 0.341813 | 4_4:+22037934 | None:intergenic |
| TGGTTCATGATAGGACATTA+AGG | 0.344878 | 4_4:-22037749 | Msa0674580:three_prime_UTR |
| GTTGTAGTTATCTGACTCTA+TGG | 0.353068 | 4_4:-22037669 | Msa0674580:three_prime_UTR |
| GATGGACGTAAGCAACAAAA+TGG | 0.355547 | 4_4:+22037715 | None:intergenic |
| CGAAGAGCTTGCGCACGCTT+TGG | 0.355572 | 4_4:-22037969 | Msa0674580:CDS |
| GCAGATGATGTACCGACTTC+AGG | 0.367871 | 4_4:-22041725 | Msa0674580:CDS |
| TTTACCGAGTTACTCTTTAT+GGG | 0.370557 | 4_4:-22040439 | Msa0674580:CDS |
| TTTCAGAGTAACGTAATCAT+AGG | 0.380196 | 4_4:+22037856 | None:intergenic |
| TTCATATTCGATACATTCCT+TGG | 0.402001 | 4_4:-22041613 | Msa0674580:intron |
| ATTGCTTCTGCCTTCTGTAC+AGG | 0.413988 | 4_4:+22037999 | None:intergenic |
| AAAACTCGTGTTGAGAAAGA+TGG | 0.424041 | 4_4:-22041638 | Msa0674580:CDS |
| GTAAACAACAGAAACAGATT+TGG | 0.429859 | 4_4:+22040457 | None:intergenic |
| GTTGCTTACGTCCATCTAGT+AGG | 0.451835 | 4_4:-22037708 | Msa0674580:three_prime_UTR |
| AGATTTGGCATCAGCAGAAT+AGG | 0.453804 | 4_4:+22040472 | None:intergenic |
| CTTGCGCACGCTTTGGACTG+GGG | 0.493438 | 4_4:-22037962 | Msa0674580:CDS |
| TAGAGTGGTCTGGTGAGGTT+CGG | 0.494657 | 4_4:-22040502 | Msa0674580:CDS |
| AAACTCGTGTTGAGAAAGAT+GGG | 0.521709 | 4_4:-22041637 | Msa0674580:CDS |
| TAGATATTTAGGGAATCAAC+TGG | 0.527816 | 4_4:-22038056 | Msa0674580:CDS |
| TACTCTGAAACAAGATCGTA+TGG | 0.546972 | 4_4:-22037843 | Msa0674580:three_prime_UTR |
| TCTTTCAGTATTTCAGACAA+AGG | 0.552005 | 4_4:+22041692 | None:intergenic |
| TTTGCTAGAGTGGTCTGGTG+AGG | 0.565278 | 4_4:-22040507 | Msa0674580:intron |
| TCATATCAAAAGACATACAA+TGG | 0.572361 | 4_4:+22037641 | None:intergenic |
| TTATGGAGATCCTGTACAGA+AGG | 0.579974 | 4_4:-22038009 | Msa0674580:CDS |
| GTGTTGAACTTACACGCCCC+AGG | 0.580269 | 4_4:-22040619 | Msa0674580:intron |
| TGTACAGAAGGCAGAAGCAA+TGG | 0.585197 | 4_4:-22037997 | Msa0674580:CDS |
| CAGTCCCATAAAGAGTAACT+CGG | 0.599594 | 4_4:+22040435 | None:intergenic |
| AGTAGGAAACGAAATGACTT+CGG | 0.620522 | 4_4:-22037691 | Msa0674580:three_prime_UTR |
| TCTTTATGGGACTGATGCTG+AGG | 0.623906 | 4_4:-22040426 | Msa0674580:intron |
| ACGCTTCTTCATGATAAAGG+TGG | 0.638320 | 4_4:+22037937 | None:intergenic |
| GGTCTACAGATTCCTGAAGT+CGG | 0.641126 | 4_4:+22041713 | None:intergenic |
| GGGCGTGTAAGTTCAACACG+CGG | 0.764490 | 4_4:+22040623 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGATATTTTTTATAAAAC+AGG | + | chr4_4:22039947-22039966 | None:intergenic | 10.0% |
| !! | TAGTTTATTAATTAAGTTTA+AGG | + | chr4_4:22040654-22040673 | None:intergenic | 10.0% |
| !! | GATAATAAAGTAGTTTATTA+GGG | + | chr4_4:22037915-22037934 | None:intergenic | 15.0% |
| !! | AATAGCAAAATTAATCAAAA+GGG | + | chr4_4:22038920-22038939 | None:intergenic | 15.0% |
| !! | AAATAGCAAAATTAATCAAA+AGG | + | chr4_4:22038921-22038940 | None:intergenic | 15.0% |
| !! | TAATGATTTACTTAGAATTT+GGG | + | chr4_4:22039269-22039288 | None:intergenic | 15.0% |
| !! | ATAATGATTTACTTAGAATT+TGG | + | chr4_4:22039270-22039289 | None:intergenic | 15.0% |
| !! | TACGAACAAAAAAAATTAAA+AGG | + | chr4_4:22039293-22039312 | None:intergenic | 15.0% |
| !!! | ATTTTCAAATGACTAAATAT+AGG | - | chr4_4:22040109-22040128 | Msa0674580:intron | 15.0% |
| !! | TTTGAAAATTGAAAAAACTT+AGG | + | chr4_4:22040290-22040309 | None:intergenic | 15.0% |
| !!! | TTTTCAATTTTCAAATTACT+AGG | - | chr4_4:22040295-22040314 | Msa0674580:intron | 15.0% |
| !!! | TTTCAATTTTCAAATTACTA+GGG | - | chr4_4:22040296-22040315 | Msa0674580:intron | 15.0% |
| !! | AACTTAATTAATAAACTAGA+TGG | - | chr4_4:22040656-22040675 | Msa0674580:intron | 15.0% |
| !!! | ATTATTTCTCTAGATATTTA+GGG | - | chr4_4:22041417-22041436 | Msa0674580:intron | 15.0% |
| !! | GGATAATAAAGTAGTTTATT+AGG | + | chr4_4:22037916-22037935 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTCAAATTCGTA+GGG | + | chr4_4:22038039-22038058 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTTTCAAATTCGT+AGG | + | chr4_4:22038040-22038059 | None:intergenic | 20.0% |
| !!! | ACGAATTTGAAAAACTTTTT+TGG | - | chr4_4:22038040-22038059 | Msa0674580:CDS | 20.0% |
| !! | AAATAGGCTGAATAAAAATT+TGG | - | chr4_4:22038116-22038135 | Msa0674580:intron | 20.0% |
| !! | AATAGGCTGAATAAAAATTT+GGG | - | chr4_4:22038117-22038136 | Msa0674580:intron | 20.0% |
| !! | TTATAGAGTTTAACATATAC+TGG | + | chr4_4:22039192-22039211 | None:intergenic | 20.0% |
| !! | AATTTACTTAGAAAATGTGT+GGG | - | chr4_4:22039228-22039247 | Msa0674580:intron | 20.0% |
| !!! | TATTTTTATTTCTCCCTTTA+AGG | - | chr4_4:22039320-22039339 | Msa0674580:intron | 20.0% |
| !!! | TTTTTGAGACTATAAAATGT+TGG | + | chr4_4:22039473-22039492 | None:intergenic | 20.0% |
| !! | TATTTACTACTTATATGTCT+CGG | - | chr4_4:22039518-22039537 | Msa0674580:intron | 20.0% |
| !!! | ATTGATAATTACTGTGATAT+TGG | - | chr4_4:22039719-22039738 | Msa0674580:intron | 20.0% |
| !!! | AAATATAGGTGCATTATTTT+TGG | - | chr4_4:22040123-22040142 | Msa0674580:intron | 20.0% |
| !!! | AATATAGGTGCATTATTTTT+GGG | - | chr4_4:22040124-22040143 | Msa0674580:intron | 20.0% |
| !!! | TTCAATTTTCAAATTACTAG+GGG | - | chr4_4:22040297-22040316 | Msa0674580:intron | 20.0% |
| !!! | AGGCATATAAATGAAAATTT+TGG | + | chr4_4:22041170-22041189 | None:intergenic | 20.0% |
| !! | ATGTAGATATAATATAGCTA+CGG | - | chr4_4:22041294-22041313 | Msa0674580:intron | 20.0% |
| !! | CTAAATATCTAGAGAAATAA+TGG | + | chr4_4:22041418-22041437 | None:intergenic | 20.0% |
| !!! | CATTATTTCTCTAGATATTT+AGG | - | chr4_4:22041416-22041435 | Msa0674580:intron | 20.0% |
| !! | TAAATGCCAAAAATATACAA+TGG | + | chr4_4:22041606-22041625 | None:intergenic | 20.0% |
| !! | GATATGAAACAGTTAAATTA+TGG | - | chr4_4:22041858-22041877 | Msa0674580:CDS | 20.0% |
| !!! | ATTTTTGATGAAGTGTCAAA+CGG | + | chr4_4:22037593-22037612 | None:intergenic | 25.0% |
| !! | TCTCAGATTATTCAGTTTTA+GGG | + | chr4_4:22037642-22037661 | None:intergenic | 25.0% |
| !! | TTCTCAGATTATTCAGTTTT+AGG | + | chr4_4:22037643-22037662 | None:intergenic | 25.0% |
| ! | AAAGTAGTTTATTAGGGTTA+GGG | + | chr4_4:22037909-22037928 | None:intergenic | 25.0% |
| ! | TAAAGTAGTTTATTAGGGTT+AGG | + | chr4_4:22037910-22037929 | None:intergenic | 25.0% |
| ! | AATGTTATTACAAGAATACG+AGG | + | chr4_4:22037937-22037956 | None:intergenic | 25.0% |
| !! | TAACCAGTTTAGTAATTTGT+TGG | - | chr4_4:22038066-22038085 | Msa0674580:intron | 25.0% |
| ! | TTTGGATAAACGACTTAAAT+AGG | - | chr4_4:22038100-22038119 | Msa0674580:intron | 25.0% |
| ! | CCCAATATACTTATTTATTG+CGG | + | chr4_4:22038266-22038285 | None:intergenic | 25.0% |
| ! | CCGCAATAAATAAGTATATT+GGG | - | chr4_4:22038263-22038282 | Msa0674580:intron | 25.0% |
| ! | CGCAATAAATAAGTATATTG+GGG | - | chr4_4:22038264-22038283 | Msa0674580:intron | 25.0% |
| ! | GCAATAAATAAGTATATTGG+GGG | - | chr4_4:22038265-22038284 | Msa0674580:intron | 25.0% |
| ! | CAATAAATAAGTATATTGGG+GGG | - | chr4_4:22038266-22038285 | Msa0674580:intron | 25.0% |
| ! | TTGACTAACATAATACAATC+AGG | - | chr4_4:22038333-22038352 | Msa0674580:intron | 25.0% |
| ! | TGACTAACATAATACAATCA+GGG | - | chr4_4:22038334-22038353 | Msa0674580:intron | 25.0% |
| !! | GACTTATTTGAGTTTATCTT+TGG | - | chr4_4:22038480-22038499 | Msa0674580:intron | 25.0% |
| !!! | ATGACATAAGCTATTTCTAT+AGG | - | chr4_4:22038545-22038564 | Msa0674580:intron | 25.0% |
| !! | ACAATTTTCGTAAGTTATCT+TGG | + | chr4_4:22038575-22038594 | None:intergenic | 25.0% |
| !!! | TATTTGAGTTTAGCTTTGTT+TGG | + | chr4_4:22038715-22038734 | None:intergenic | 25.0% |
| ! | ACAACATTCATAATAACAGA+GGG | + | chr4_4:22038823-22038842 | None:intergenic | 25.0% |
| ! | AACAACATTCATAATAACAG+AGG | + | chr4_4:22038824-22038843 | None:intergenic | 25.0% |
| ! | TCGGACAAAAATACAAATAT+GGG | + | chr4_4:22039161-22039180 | None:intergenic | 25.0% |
| ! | ACATATACTGGTAAATATCT+CGG | + | chr4_4:22039180-22039199 | None:intergenic | 25.0% |
| ! | GAATTTACTTAGAAAATGTG+TGG | - | chr4_4:22039227-22039246 | Msa0674580:intron | 25.0% |
| ! | ATTTACTTAGAAAATGTGTG+GGG | - | chr4_4:22039229-22039248 | Msa0674580:intron | 25.0% |
| ! | ACGAAAACATAAACCTTAAA+GGG | + | chr4_4:22039336-22039355 | None:intergenic | 25.0% |
| ! | TTTGAAAATTACAGTCAAGA+TGG | + | chr4_4:22040098-22040117 | None:intergenic | 25.0% |
| ! | TTTGAGAAAATTATTGCTTG+AGG | - | chr4_4:22040200-22040219 | Msa0674580:intron | 25.0% |
| !!! | GTTATGTGTATTTTAAGTGA+AGG | - | chr4_4:22040235-22040254 | Msa0674580:intron | 25.0% |
| ! | TTATTAGTGTGTGTTTAGAT+GGG | + | chr4_4:22040584-22040603 | None:intergenic | 25.0% |
| ! | TTTATTAGTGTGTGTTTAGA+TGG | + | chr4_4:22040585-22040604 | None:intergenic | 25.0% |
| ! | AATCAAAGATTCAATGTGTT+AGG | + | chr4_4:22040686-22040705 | None:intergenic | 25.0% |
| !! | GATTTTGTTCTATATACTGA+TGG | + | chr4_4:22040845-22040864 | None:intergenic | 25.0% |
| ! | TCAACAGATGATACAAATTA+TGG | - | chr4_4:22041457-22041476 | Msa0674580:intron | 25.0% |
| !! | TAACTGCCATTGTATATTTT+TGG | - | chr4_4:22041597-22041616 | Msa0674580:intron | 25.0% |
| ! | TCATATCAAAAGACATACAA+TGG | + | chr4_4:22041845-22041864 | None:intergenic | 25.0% |
| GTTTGACACTTCATCAAAAA+TGG | - | chr4_4:22037592-22037611 | Msa0674580:three_prime_UTR | 30.0% | |
| !!! | ATTATTCAGTTTTAGGGTAG+AGG | + | chr4_4:22037636-22037655 | None:intergenic | 30.0% |
| ! | TCGATTTTGCTTCAGAAAAT+AGG | + | chr4_4:22037675-22037694 | None:intergenic | 30.0% |
| !! | ATAATGATGATGCTTTTGCA+TGG | + | chr4_4:22037715-22037734 | None:intergenic | 30.0% |
| TCTTTCAGTATTTCAGACAA+AGG | + | chr4_4:22037794-22037813 | None:intergenic | 30.0% | |
| TTCATATTCGATACATTCCT+TGG | - | chr4_4:22037870-22037889 | Msa0674580:three_prime_UTR | 30.0% | |
| AAATTCGTAGGGACTAAAAA+GGG | + | chr4_4:22038028-22038047 | None:intergenic | 30.0% | |
| !! | TTTAGTAATTTGTTGGACCT+AGG | - | chr4_4:22038073-22038092 | Msa0674580:intron | 30.0% |
| ACTAACATAATGCATAGTCA+GGG | + | chr4_4:22038219-22038238 | None:intergenic | 30.0% | |
| GCCGCAATAAATAAGTATAT+TGG | - | chr4_4:22038262-22038281 | Msa0674580:intron | 30.0% | |
| TTGACTAACATAATGCAATC+AGG | - | chr4_4:22038363-22038382 | Msa0674580:intron | 30.0% | |
| TGACTAACATAATGCAATCA+GGG | - | chr4_4:22038364-22038383 | Msa0674580:intron | 30.0% | |
| ! | TATAGAAGCAACTTTTACAG+AGG | - | chr4_4:22038639-22038658 | Msa0674580:intron | 30.0% |
| GACTCTTAAAAGTAGATACA+TGG | - | chr4_4:22038749-22038768 | Msa0674580:intron | 30.0% | |
| GTTATTATGAATGTTGTTGC+AGG | - | chr4_4:22038826-22038845 | Msa0674580:intron | 30.0% | |
| GTAAACAACAGAAACAGATT+TGG | + | chr4_4:22039029-22039048 | None:intergenic | 30.0% | |
| TTTACCGAGTTACTCTTTAT+GGG | - | chr4_4:22039044-22039063 | Msa0674580:intron | 30.0% | |
| GGACAAAAATACAAATATGG+GGG | + | chr4_4:22039159-22039178 | None:intergenic | 30.0% | |
| CGGACAAAAATACAAATATG+GGG | + | chr4_4:22039160-22039179 | None:intergenic | 30.0% | |
| CTCGGACAAAAATACAAATA+TGG | + | chr4_4:22039162-22039181 | None:intergenic | 30.0% | |
| GATTTACTTAGAATTTGGGT+TGG | + | chr4_4:22039265-22039284 | None:intergenic | 30.0% | |
| GACGAAAACATAAACCTTAA+AGG | + | chr4_4:22039337-22039356 | None:intergenic | 30.0% | |
| ! | GTTGGTGAGTTTATTATAGA+TGG | + | chr4_4:22039455-22039474 | None:intergenic | 30.0% |
| TTCCTTTCATCTAATCTACA+GGG | + | chr4_4:22039641-22039660 | None:intergenic | 30.0% | |
| TTTCCTTTCATCTAATCTAC+AGG | + | chr4_4:22039642-22039661 | None:intergenic | 30.0% | |
| AGATGAAAGGAAAATTAGAG+AGG | - | chr4_4:22039649-22039668 | Msa0674580:intron | 30.0% | |
| GATGAAAGGAAAATTAGAGA+GGG | - | chr4_4:22039650-22039669 | Msa0674580:intron | 30.0% | |
| ATCCTTGCATTCTTGAAAAT+AGG | - | chr4_4:22039998-22040017 | Msa0674580:intron | 30.0% | |
| ATTCTTGAAAATAGGTCTCT+TGG | - | chr4_4:22040006-22040025 | Msa0674580:intron | 30.0% | |
| ATTATTGCTTGAGGAAATCA+TGG | - | chr4_4:22040209-22040228 | Msa0674580:intron | 30.0% | |
| TTATTGCTTGAGGAAATCAT+GGG | - | chr4_4:22040210-22040229 | Msa0674580:intron | 30.0% | |
| GAAAAGAAATTCTGTACTTG+AGG | - | chr4_4:22040323-22040342 | Msa0674580:intron | 30.0% | |
| TTCTGTACTTGAGGTATAAA+AGG | - | chr4_4:22040332-22040351 | Msa0674580:intron | 30.0% | |
| !! | AAGGAATTTTTCAAAGCTCT+CGG | - | chr4_4:22040351-22040370 | Msa0674580:intron | 30.0% |
| !! | AGCTCTCGGTTTTATATATT+AGG | - | chr4_4:22040365-22040384 | Msa0674580:intron | 30.0% |
| ! | AAATAGCAGAAGCTATTTCA+AGG | + | chr4_4:22040523-22040542 | None:intergenic | 30.0% |
| TATTAGTGTGTGTTTAGATG+GGG | + | chr4_4:22040583-22040602 | None:intergenic | 30.0% | |
| ! | CTTTTAACCAACACAATACT+AGG | + | chr4_4:22040764-22040783 | None:intergenic | 30.0% |
| !! | CTAGTATTGTGTTGGTTAAA+AGG | - | chr4_4:22040762-22040781 | Msa0674580:intron | 30.0% |
| ! | TTGTTATTGTGTCTAGAAAG+TGG | + | chr4_4:22040810-22040829 | None:intergenic | 30.0% |
| CAGTATATAGAACAAAATCC+TGG | - | chr4_4:22040846-22040865 | Msa0674580:intron | 30.0% | |
| !! | TGATTGTTGATTCACTTTCT+TGG | + | chr4_4:22041012-22041031 | None:intergenic | 30.0% |
| TTGAGTCAGAAAATGAAACA+AGG | - | chr4_4:22041320-22041339 | Msa0674580:intron | 30.0% | |
| TAGATATTTAGGGAATCAAC+TGG | - | chr4_4:22041427-22041446 | Msa0674580:intron | 30.0% | |
| TTTCAGAGTAACGTAATCAT+AGG | + | chr4_4:22041630-22041649 | None:intergenic | 30.0% | |
| ! | ATGGTTAGTTACCACTTAAA+AGG | - | chr4_4:22041659-22041678 | Msa0674580:CDS | 30.0% |
| ! | ACAAAATGCTACCTTTTAAG+TGG | + | chr4_4:22041673-22041692 | None:intergenic | 30.0% |
| !!! | TCTTTTTTGAGTTCTCTGTT+TGG | - | chr4_4:22041714-22041733 | Msa0674580:CDS | 30.0% |
| !! | ATCAGCAGATTTTGAGAAAG+TGG | - | chr4_4:22037736-22037755 | Msa0674580:three_prime_UTR | 35.0% |
| !! | CGAGTTTTAACAAGAGAATC+AGG | + | chr4_4:22037833-22037852 | None:intergenic | 35.0% |
| AAAACTCGTGTTGAGAAAGA+TGG | - | chr4_4:22037845-22037864 | Msa0674580:three_prime_UTR | 35.0% | |
| AAACTCGTGTTGAGAAAGAT+GGG | - | chr4_4:22037846-22037865 | Msa0674580:three_prime_UTR | 35.0% | |
| GTTTATTAGGGTTAGGGTTA+AGG | + | chr4_4:22037903-22037922 | None:intergenic | 35.0% | |
| CAAATTCGTAGGGACTAAAA+AGG | + | chr4_4:22038029-22038048 | None:intergenic | 35.0% | |
| GGTCCAACAAATTACTAAAC+TGG | + | chr4_4:22038072-22038091 | None:intergenic | 35.0% | |
| GACTAACATAATGCATAGTC+AGG | + | chr4_4:22038220-22038239 | None:intergenic | 35.0% | |
| AACATAGTCCCTAACGTAAT+AGG | - | chr4_4:22038240-22038259 | Msa0674580:intron | 35.0% | |
| ! | AATGCAATCAGGGACTATTT+TGG | - | chr4_4:22038374-22038393 | Msa0674580:intron | 35.0% |
| ! | TAAATAGTCCTTTTCGTAGC+TGG | + | chr4_4:22038444-22038463 | None:intergenic | 35.0% |
| GGACTATTTACGCAAATGTT+TGG | - | chr4_4:22038454-22038473 | Msa0674580:intron | 35.0% | |
| !! | CTGTTTTTCTTTTGCTAGAG+TGG | - | chr4_4:22038966-22038985 | Msa0674580:intron | 35.0% |
| GTTTACCGAGTTACTCTTTA+TGG | - | chr4_4:22039043-22039062 | Msa0674580:intron | 35.0% | |
| ! | AAGTTTTCCGTTAATGCACT+TGG | - | chr4_4:22039103-22039122 | Msa0674580:intron | 35.0% |
| GATAACACCAAGTGCATTAA+CGG | + | chr4_4:22039113-22039132 | None:intergenic | 35.0% | |
| TCAGCACTAGAAATGAGAAT+TGG | + | chr4_4:22039409-22039428 | None:intergenic | 35.0% | |
| !! | AATTCTCATTTCTAGTGCTG+AGG | - | chr4_4:22039408-22039427 | Msa0674580:intron | 35.0% |
| TATATGTCTCGGTATGAGAT+TGG | - | chr4_4:22039529-22039548 | Msa0674580:intron | 35.0% | |
| ! | AAGACTGTCATTTAGTGAAG+CGG | + | chr4_4:22039585-22039604 | None:intergenic | 35.0% |
| GAATGAGATTTCAACTAAGG+GGG | + | chr4_4:22039619-22039638 | None:intergenic | 35.0% | |
| GGAATGAGATTTCAACTAAG+GGG | + | chr4_4:22039620-22039639 | None:intergenic | 35.0% | |
| GGGAATGAGATTTCAACTAA+GGG | + | chr4_4:22039621-22039640 | None:intergenic | 35.0% | |
| AGGGAATGAGATTTCAACTA+AGG | + | chr4_4:22039622-22039641 | None:intergenic | 35.0% | |
| TTCCCTGTAGATTAGATGAA+AGG | - | chr4_4:22039636-22039655 | Msa0674580:intron | 35.0% | |
| ACAGATACGGAGTAATGATT+CGG | + | chr4_4:22039972-22039991 | None:intergenic | 35.0% | |
| !! | GACCTATTTTCAAGAATGCA+AGG | + | chr4_4:22040003-22040022 | None:intergenic | 35.0% |
| TTAGGAGCAGAAGTTTAACT+TGG | - | chr4_4:22040383-22040402 | Msa0674580:intron | 35.0% | |
| ! | TAGGAGCAGAAGTTTAACTT+GGG | - | chr4_4:22040384-22040403 | Msa0674580:intron | 35.0% |
| CTTGATGTCTCTATCAAGAA+AGG | + | chr4_4:22040415-22040434 | None:intergenic | 35.0% | |
| ACTACTTATACGACGTTTGT+TGG | - | chr4_4:22040607-22040626 | Msa0674580:intron | 35.0% | |
| CTACTTATACGACGTTTGTT+GGG | - | chr4_4:22040608-22040627 | Msa0674580:intron | 35.0% | |
| CAAAGGTCAACACTATCAAA+AGG | + | chr4_4:22040741-22040760 | None:intergenic | 35.0% | |
| GCATGTTTACAATACTCCAA+GGG | + | chr4_4:22041060-22041079 | None:intergenic | 35.0% | |
| !! | ACATGCGAAAGTGTTTAACT+AGG | - | chr4_4:22041074-22041093 | Msa0674580:intron | 35.0% |
| AATATGCAAAAGCAATCTGC+AGG | + | chr4_4:22041190-22041209 | None:intergenic | 35.0% | |
| !!! | GCTATTGCTTTTGAAGTCTT+TGG | - | chr4_4:22041252-22041271 | Msa0674580:intron | 35.0% |
| AATCTGTAGACAGAAAGAAC+AGG | + | chr4_4:22041363-22041382 | None:intergenic | 35.0% | |
| ATGACGCTTCTTCATGATAA+AGG | + | chr4_4:22041552-22041571 | None:intergenic | 35.0% | |
| !!! | AACAAGCGTTTTTTCATGTC+TGG | - | chr4_4:22041573-22041592 | Msa0674580:intron | 35.0% |
| !! | TACTCTGAAACAAGATCGTA+TGG | - | chr4_4:22041640-22041659 | Msa0674580:CDS | 35.0% |
| ! | TTCTCTGTTTGGTTCATGAT+AGG | - | chr4_4:22041725-22041744 | Msa0674580:CDS | 35.0% |
| TGGTTCATGATAGGACATTA+AGG | - | chr4_4:22041734-22041753 | Msa0674580:CDS | 35.0% | |
| TCATTTCGTTTCCTACTAGA+TGG | + | chr4_4:22041789-22041808 | None:intergenic | 35.0% | |
| AGTAGGAAACGAAATGACTT+CGG | - | chr4_4:22041792-22041811 | Msa0674580:CDS | 35.0% | |
| GTTGTAGTTATCTGACTCTA+TGG | - | chr4_4:22041814-22041833 | Msa0674580:CDS | 35.0% | |
| ! | TTCAACTGCTAGATGTTTTG+AGG | - | chr4_4:22041881-22041900 | Msa0674580:exon | 35.0% |
| !!! | GATGTTTTGAGGAGAATTGA+TGG | - | chr4_4:22041892-22041911 | Msa0674580:exon | 35.0% |
| !! | AGGGTTAAGGAAAAGTACCA+AGG | + | chr4_4:22037890-22037909 | None:intergenic | 40.0% |
| TCGTTTATCCAAACAAGCCT+AGG | + | chr4_4:22038093-22038112 | None:intergenic | 40.0% | |
| TATTGCGGCCTATTACGTTA+GGG | + | chr4_4:22038251-22038270 | None:intergenic | 40.0% | |
| TTATTGCGGCCTATTACGTT+AGG | + | chr4_4:22038252-22038271 | None:intergenic | 40.0% | |
| TTTCGTAGCTGGATGTGTTA+CGG | + | chr4_4:22038433-22038452 | None:intergenic | 40.0% | |
| TAACACATCCAGCTACGAAA+AGG | - | chr4_4:22038433-22038452 | Msa0674580:intron | 40.0% | |
| ACGTGTGTGTGTATATACCT+GGG | + | chr4_4:22038884-22038903 | None:intergenic | 40.0% | |
| TACGTGTGTGTGTATATACC+TGG | + | chr4_4:22038885-22038904 | None:intergenic | 40.0% | |
| ! | TTTCTTTTGCTAGAGTGGTC+TGG | - | chr4_4:22038971-22038990 | Msa0674580:intron | 40.0% |
| AGATTTGGCATCAGCAGAAT+AGG | + | chr4_4:22039014-22039033 | None:intergenic | 40.0% | |
| CAGTCCCATAAAGAGTAACT+CGG | + | chr4_4:22039051-22039070 | None:intergenic | 40.0% | |
| !! | GGCTGTCTTTGATTTTGAAG+AGG | - | chr4_4:22039671-22039690 | Msa0674580:intron | 40.0% |
| CAGATACGGAGTAATGATTC+GGG | + | chr4_4:22039971-22039990 | None:intergenic | 40.0% | |
| TCATTACTCCGTATCTGTAC+TGG | - | chr4_4:22039974-22039993 | Msa0674580:intron | 40.0% | |
| CAAGGATACCAGTACAGATA+CGG | + | chr4_4:22039985-22040004 | None:intergenic | 40.0% | |
| ACAGTCAAGATGGTAGATAC+TGG | + | chr4_4:22040088-22040107 | None:intergenic | 40.0% | |
| AGCAATTAGAACTACCGATG+AGG | - | chr4_4:22040478-22040497 | Msa0674580:CDS | 40.0% | |
| ! | TAGAACTACCGATGAGGTTT+TGG | - | chr4_4:22040484-22040503 | Msa0674580:CDS | 40.0% |
| ACCTTTGCCTAGTATTGTGT+TGG | - | chr4_4:22040754-22040773 | Msa0674580:intron | 40.0% | |
| ACCAACACAATACTAGGCAA+AGG | + | chr4_4:22040758-22040777 | None:intergenic | 40.0% | |
| TATATACTGATGGCTCGTGA+AGG | + | chr4_4:22040835-22040854 | None:intergenic | 40.0% | |
| ! | TGTGTCTAGTTCAACTTTCC+AGG | + | chr4_4:22040867-22040886 | None:intergenic | 40.0% |
| ! | AGTCAGCTGTGTGACTTTTA+AGG | - | chr4_4:22040912-22040931 | Msa0674580:intron | 40.0% |
| CGCATGTTTACAATACTCCA+AGG | + | chr4_4:22041061-22041080 | None:intergenic | 40.0% | |
| TTGTTCAGCTTTCTTGACAG+TGG | - | chr4_4:22041104-22041123 | Msa0674580:intron | 40.0% | |
| TTATGGAGATCCTGTACAGA+AGG | - | chr4_4:22041474-22041493 | Msa0674580:intron | 40.0% | |
| ACGCTTCTTCATGATAAAGG+TGG | + | chr4_4:22041549-22041568 | None:intergenic | 40.0% | |
| GATGGACGTAAGCAACAAAA+TGG | + | chr4_4:22041771-22041790 | None:intergenic | 40.0% | |
| GGTCTACAGATTCCTGAAGT+CGG | + | chr4_4:22037773-22037792 | None:intergenic | 45.0% | |
| ! | TTGTTGGACCTAGGCTTGTT+TGG | - | chr4_4:22038082-22038101 | Msa0674580:intron | 45.0% |
| TGCATAGTCAGGGACTATCT+TGG | + | chr4_4:22038209-22038228 | None:intergenic | 45.0% | |
| TTCGTAGCTGGATGTGTTAC+GGG | + | chr4_4:22038432-22038451 | None:intergenic | 45.0% | |
| CGTGTGTGTGTATATACCTG+GGG | + | chr4_4:22038883-22038902 | None:intergenic | 45.0% | |
| TCTTTATGGGACTGATGCTG+AGG | - | chr4_4:22039057-22039076 | Msa0674580:intron | 45.0% | |
| CTGCAGAACCAAAACCTCAT+CGG | + | chr4_4:22040495-22040514 | None:intergenic | 45.0% | |
| GTTTAGATGGGGAATGGAAG+AGG | + | chr4_4:22040572-22040591 | None:intergenic | 45.0% | |
| GTGTGTGTTTAGATGGGGAA+TGG | + | chr4_4:22040578-22040597 | None:intergenic | 45.0% | |
| AATCTTGCTAGCTATGCCCT+TGG | - | chr4_4:22041041-22041060 | Msa0674580:intron | 45.0% | |
| ATTGCTTCTGCCTTCTGTAC+AGG | + | chr4_4:22041487-22041506 | None:intergenic | 45.0% | |
| TGTACAGAAGGCAGAAGCAA+TGG | - | chr4_4:22041486-22041505 | Msa0674580:intron | 45.0% | |
| GTTGCTTACGTCCATCTAGT+AGG | - | chr4_4:22041775-22041794 | Msa0674580:CDS | 45.0% | |
| !! | GCAGATGATGTACCGACTTC+AGG | - | chr4_4:22037758-22037777 | Msa0674580:three_prime_UTR | 50.0% |
| TTTGCTAGAGTGGTCTGGTG+AGG | - | chr4_4:22038976-22038995 | Msa0674580:intron | 50.0% | |
| TAGAGTGGTCTGGTGAGGTT+CGG | - | chr4_4:22038981-22039000 | Msa0674580:intron | 50.0% | |
| ! | GTCTCGGTATGAGATTGGTC+TGG | - | chr4_4:22039534-22039553 | Msa0674580:intron | 50.0% |
| GGGCGTGTAAGTTCAACACG+CGG | + | chr4_4:22038863-22038882 | None:intergenic | 55.0% | |
| GTGTTGAACTTACACGCCCC+AGG | - | chr4_4:22038864-22038883 | Msa0674580:intron | 55.0% | |
| CGAAGAGCTTGCGCACGCTT+TGG | - | chr4_4:22041514-22041533 | Msa0674580:intron | 60.0% | |
| ! | AGCTTGCGCACGCTTTGGAC+TGG | - | chr4_4:22041519-22041538 | Msa0674580:intron | 60.0% |
| ! | GCTTGCGCACGCTTTGGACT+GGG | - | chr4_4:22041520-22041539 | Msa0674580:intron | 60.0% |
| ! | CTTGCGCACGCTTTGGACTG+GGG | - | chr4_4:22041521-22041540 | Msa0674580:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 22037584 | 22041921 | 22037584 | ID=Msa0674580;Name=Msa0674580 |
| chr4_4 | mRNA | 22037584 | 22041921 | 22037584 | ID=Msa0674580-mRNA-1;Parent=Msa0674580;Name=Msa0674580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=27|1|1|1|1|1|4|348|185 |
| chr4_4 | exon | 22037584 | 22038075 | 22037584 | ID=Msa0674580-mRNA-1:exon:6272;Parent=Msa0674580-mRNA-1 |
| chr4_4 | exon | 22040427 | 22040521 | 22040427 | ID=Msa0674580-mRNA-1:exon:6271;Parent=Msa0674580-mRNA-1 |
| chr4_4 | exon | 22040620 | 22040657 | 22040620 | ID=Msa0674580-mRNA-1:exon:6270;Parent=Msa0674580-mRNA-1 |
| chr4_4 | exon | 22041614 | 22041921 | 22041614 | ID=Msa0674580-mRNA-1:exon:6269;Parent=Msa0674580-mRNA-1 |
| chr4_4 | five_prime_UTR | 22041895 | 22041921 | 22041895 | ID=Msa0674580-mRNA-1:five_prime_utr;Parent=Msa0674580-mRNA-1 |
| chr4_4 | CDS | 22041614 | 22041894 | 22041614 | ID=Msa0674580-mRNA-1:cds;Parent=Msa0674580-mRNA-1 |
| chr4_4 | CDS | 22040620 | 22040657 | 22040620 | ID=Msa0674580-mRNA-1:cds;Parent=Msa0674580-mRNA-1 |
| chr4_4 | CDS | 22040427 | 22040521 | 22040427 | ID=Msa0674580-mRNA-1:cds;Parent=Msa0674580-mRNA-1 |
| chr4_4 | CDS | 22037932 | 22038075 | 22037932 | ID=Msa0674580-mRNA-1:cds;Parent=Msa0674580-mRNA-1 |
| chr4_4 | three_prime_UTR | 22037584 | 22037931 | 22037584 | ID=Msa0674580-mRNA-1:three_prime_utr;Parent=Msa0674580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
