Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101720 | XP_013448460.1 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101720 | sp|P09189|HSP7C_PETHY | 65.428 | 619 | 208 | 5 | 1 | 617 | 1 | 615 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101720 | A0A072TYI4 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa1101720 | 0.800452 | 1.431701e-48 | -8.615850e-47 |
| Msa0017510 | Msa1101720 | 0.802604 | 5.185052e-49 | -8.615850e-47 |
| Msa0027820 | Msa1101720 | 0.804494 | 2.103227e-49 | -8.615850e-47 |
| Msa0063890 | Msa1101720 | 0.828062 | 1.107971e-54 | -8.615850e-47 |
| Msa0101440 | Msa1101720 | 0.831331 | 1.773609e-55 | -8.615850e-47 |
| Msa0120400 | Msa1101720 | 0.803713 | 3.056257e-49 | -8.615850e-47 |
| Msa0625190 | Msa1101720 | 0.832229 | 1.064867e-55 | -8.615850e-47 |
| Msa0626450 | Msa1101720 | 0.800187 | 1.620935e-48 | -8.615850e-47 |
| Msa0664600 | Msa1101720 | 0.802597 | 5.201080e-49 | -8.615850e-47 |
| Msa0669320 | Msa1101720 | 0.809414 | 1.914560e-50 | -8.615850e-47 |
| Msa0733390 | Msa1101720 | 0.808833 | 2.549857e-50 | -8.615850e-47 |
| Msa0754520 | Msa1101720 | 0.809420 | 1.908936e-50 | -8.615850e-47 |
| Msa0756460 | Msa1101720 | 0.806090 | 9.737266e-50 | -8.615850e-47 |
| Msa0770720 | Msa1101720 | 0.800022 | 1.751112e-48 | -8.615850e-47 |
| Msa0833220 | Msa1101720 | 0.809376 | 1.950982e-50 | -8.615850e-47 |
| Msa0124060 | Msa1101720 | 0.807843 | 4.145734e-50 | -8.615850e-47 |
| Msa0157290 | Msa1101720 | 0.803617 | 3.200050e-49 | -8.615850e-47 |
| Msa0168500 | Msa1101720 | 0.810701 | 1.011361e-50 | -8.615850e-47 |
| Msa0224780 | Msa1101720 | 0.808494 | 3.012633e-50 | -8.615850e-47 |
| Msa0225680 | Msa1101720 | 0.801241 | 9.882376e-49 | -8.615850e-47 |
| Msa0367870 | Msa1101720 | 0.804775 | 1.836916e-49 | -8.615850e-47 |
| Msa0392510 | Msa1101720 | 0.803605 | 3.218264e-49 | -8.615850e-47 |
| Msa0410650 | Msa1101720 | 0.806423 | 8.287708e-50 | -8.615850e-47 |
| Msa0422850 | Msa1101720 | 0.818702 | 1.708030e-52 | -8.615850e-47 |
| Msa0422930 | Msa1101720 | 0.821059 | 4.937729e-53 | -8.615850e-47 |
| Msa0440750 | Msa1101720 | 0.801504 | 8.728344e-49 | -8.615850e-47 |
| Msa0464260 | Msa1101720 | 0.826829 | 2.188962e-54 | -8.615850e-47 |
| Msa1017430 | Msa1101720 | 0.999322 | 4.144080e-303 | -8.615850e-47 |
| Msa1019000 | Msa1101720 | 0.803603 | 3.222088e-49 | -8.615850e-47 |
| Msa1019150 | Msa1101720 | 0.821675 | 3.559654e-53 | -8.615850e-47 |
| Msa1045140 | Msa1101720 | 0.802019 | 6.842259e-49 | -8.615850e-47 |
| Msa1070010 | Msa1101720 | 0.808561 | 2.915563e-50 | -8.615850e-47 |
| Msa1085200 | Msa1101720 | 0.806526 | 7.882133e-50 | -8.615850e-47 |
| Msa1089940 | Msa1101720 | 0.804183 | 2.441528e-49 | -8.615850e-47 |
| Msa1101710 | Msa1101720 | 0.979954 | 4.081696e-149 | -8.615850e-47 |
| Msa1101720 | Msa1101760 | 0.998819 | 8.116165e-278 | -8.615850e-47 |
| Msa1101720 | Msa1113340 | 0.800002 | 1.767751e-48 | -8.615850e-47 |
| Msa1101720 | Msa1147740 | 0.808810 | 2.579132e-50 | -8.615850e-47 |
| Msa1101720 | Msa1178180 | 0.814095 | 1.833902e-51 | -8.615850e-47 |
| Msa1101720 | Msa1229500 | 0.800145 | 1.653101e-48 | -8.615850e-47 |
| Msa1101720 | Msa1236410 | 0.803334 | 3.664085e-49 | -8.615850e-47 |
| Msa1101720 | Msa1302830 | 0.805454 | 1.324804e-49 | -8.615850e-47 |
| Msa1101720 | Msa1309030 | 0.808832 | 2.551600e-50 | -8.615850e-47 |
| Msa1101720 | Msa1332070 | 0.801597 | 8.352565e-49 | -8.615850e-47 |
| Msa1101720 | Msa1387870 | 0.811848 | 5.702381e-51 | -8.615850e-47 |
| Msa1101720 | Msa1419370 | 0.822378 | 2.445974e-53 | -8.615850e-47 |
| Msa1101720 | Msa1422420 | 0.807984 | 3.870568e-50 | -8.615850e-47 |
| Msa0261340 | Msa1101720 | 0.806683 | 7.303455e-50 | -8.615850e-47 |
| Msa0490730 | Msa1101720 | -0.806981 | 6.317643e-50 | -8.615850e-47 |
| Msa0574890 | Msa1101720 | 0.811989 | 5.312085e-51 | -8.615850e-47 |
| Msa0875290 | Msa1101720 | 0.801140 | 1.036171e-48 | -8.615850e-47 |
| Msa0876190 | Msa1101720 | 0.802153 | 6.422249e-49 | -8.615850e-47 |
| Msa0938480 | Msa1101720 | 0.801398 | 9.175243e-49 | -8.615850e-47 |
| Msa0945110 | Msa1101720 | 0.807170 | 5.761742e-50 | -8.615850e-47 |
| Msa0967380 | Msa1101720 | 0.805277 | 1.442529e-49 | -8.615850e-47 |
| Msa0974080 | Msa1101720 | 0.804563 | 2.034058e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101720 | MtrunA17_Chr7g0233311 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Msa1101720 | MtrunA17_Chr7g0233301 | 80.744 | 618 | 88 | 1 | 1 | 618 | 1 | 587 | 0.0 | 1012 |
| Msa1101720 | MtrunA17_Chr2g0298851 | 73.183 | 619 | 163 | 3 | 1 | 618 | 1 | 617 | 0.0 | 942 |
| Msa1101720 | MtrunA17_Chr7g0221661 | 72.358 | 615 | 168 | 2 | 1 | 615 | 1 | 613 | 0.0 | 934 |
| Msa1101720 | MtrunA17_Chr2g0293581 | 72.097 | 620 | 170 | 3 | 1 | 618 | 1 | 619 | 0.0 | 924 |
| Msa1101720 | MtrunA17_Chr4g0040931 | 72.549 | 612 | 167 | 1 | 1 | 612 | 1 | 611 | 0.0 | 917 |
| Msa1101720 | MtrunA17_Chr2g0298861 | 70.365 | 631 | 172 | 4 | 1 | 618 | 1 | 629 | 0.0 | 915 |
| Msa1101720 | MtrunA17_Chr5g0427901 | 71.338 | 628 | 167 | 3 | 1 | 617 | 1 | 626 | 0.0 | 914 |
| Msa1101720 | MtrunA17_Chr7g0223721 | 70.874 | 618 | 179 | 1 | 1 | 618 | 1 | 617 | 0.0 | 907 |
| Msa1101720 | MtrunA17_Chr7g0223851 | 70.598 | 619 | 179 | 2 | 1 | 618 | 10 | 626 | 0.0 | 901 |
| Msa1101720 | MtrunA17_Chr7g0225671 | 71.195 | 611 | 172 | 3 | 9 | 618 | 16 | 623 | 0.0 | 894 |
| Msa1101720 | MtrunA17_Chr7g0223801 | 69.854 | 617 | 182 | 3 | 1 | 617 | 1 | 613 | 0.0 | 893 |
| Msa1101720 | MtrunA17_Chr7g0217971 | 70.388 | 618 | 156 | 3 | 1 | 618 | 1 | 591 | 0.0 | 881 |
| Msa1101720 | MtrunA17_Chr2g0287631 | 70.227 | 618 | 184 | 0 | 1 | 618 | 1 | 618 | 0.0 | 880 |
| Msa1101720 | MtrunA17_Chr7g0223821 | 69.021 | 623 | 179 | 5 | 1 | 615 | 1 | 617 | 0.0 | 851 |
| Msa1101720 | MtrunA17_Chr7g0223821 | 45.238 | 84 | 44 | 1 | 534 | 615 | 620 | 703 | 8.79e-13 | 71.6 |
| Msa1101720 | MtrunA17_Chr4g0012541 | 66.397 | 619 | 196 | 3 | 1 | 618 | 1 | 608 | 0.0 | 839 |
| Msa1101720 | MtrunA17_Chr7g0223181 | 66.236 | 619 | 203 | 5 | 1 | 617 | 1 | 615 | 0.0 | 827 |
| Msa1101720 | MtrunA17_Chr7g0223831 | 66.883 | 616 | 173 | 4 | 1 | 615 | 1 | 586 | 0.0 | 824 |
| Msa1101720 | MtrunA17_Chr2g0296391 | 74.432 | 528 | 135 | 0 | 1 | 528 | 1 | 528 | 0.0 | 822 |
| Msa1101720 | MtrunA17_Chr4g0031321 | 64.782 | 619 | 212 | 5 | 1 | 617 | 1 | 615 | 0.0 | 815 |
| Msa1101720 | MtrunA17_Chr7g0223711 | 63.695 | 617 | 222 | 2 | 1 | 617 | 1 | 615 | 0.0 | 815 |
| Msa1101720 | MtrunA17_Chr4g0031301 | 64.943 | 619 | 211 | 5 | 1 | 617 | 1 | 615 | 0.0 | 814 |
| Msa1101720 | MtrunA17_Chr8g0390821 | 62.687 | 670 | 180 | 8 | 1 | 617 | 1 | 653 | 0.0 | 814 |
| Msa1101720 | MtrunA17_Chr7g0223291 | 64.620 | 619 | 213 | 5 | 1 | 617 | 1 | 615 | 0.0 | 811 |
| Msa1101720 | MtrunA17_Chr8g0350731 | 64.019 | 617 | 219 | 2 | 1 | 617 | 29 | 642 | 0.0 | 811 |
| Msa1101720 | MtrunA17_Chr7g0223751 | 63.857 | 617 | 220 | 2 | 1 | 617 | 1 | 614 | 0.0 | 809 |
| Msa1101720 | MtrunA17_Chr7g0262821 | 64.459 | 619 | 214 | 5 | 1 | 617 | 1 | 615 | 0.0 | 808 |
| Msa1101720 | MtrunA17_Chr7g0215261 | 65.478 | 617 | 175 | 5 | 1 | 615 | 1 | 581 | 0.0 | 808 |
| Msa1101720 | MtrunA17_Chr7g0228281 | 65.751 | 619 | 164 | 5 | 1 | 618 | 62 | 633 | 0.0 | 807 |
| Msa1101720 | MtrunA17_Chr7g0223031 | 63.889 | 612 | 218 | 2 | 1 | 612 | 1 | 609 | 0.0 | 804 |
| Msa1101720 | MtrunA17_Chr7g0223621 | 63.312 | 616 | 223 | 2 | 1 | 616 | 1 | 613 | 0.0 | 803 |
| Msa1101720 | MtrunA17_Chr7g0223731 | 61.750 | 617 | 233 | 2 | 1 | 617 | 1 | 614 | 0.0 | 788 |
| Msa1101720 | MtrunA17_Chr7g0223781 | 63.577 | 615 | 220 | 3 | 1 | 615 | 1 | 611 | 0.0 | 786 |
| Msa1101720 | MtrunA17_Chr7g0223741 | 63.727 | 601 | 215 | 2 | 1 | 601 | 1 | 598 | 0.0 | 785 |
| Msa1101720 | MtrunA17_Chr4g0073741 | 62.359 | 619 | 226 | 6 | 1 | 617 | 1 | 614 | 0.0 | 779 |
| Msa1101720 | MtrunA17_Chr7g0248151 | 63.005 | 619 | 225 | 3 | 1 | 617 | 1 | 617 | 0.0 | 771 |
| Msa1101720 | MtrunA17_Chr7g0223701 | 61.290 | 620 | 230 | 5 | 1 | 612 | 1 | 618 | 0.0 | 769 |
| Msa1101720 | MtrunA17_Chr7g0248131 | 61.675 | 621 | 232 | 5 | 1 | 617 | 1 | 619 | 0.0 | 768 |
| Msa1101720 | MtrunA17_Chr7g0223631 | 61.912 | 617 | 218 | 4 | 1 | 617 | 1 | 600 | 0.0 | 760 |
| Msa1101720 | MtrunA17_Chr2g0293601 | 68.015 | 519 | 132 | 1 | 1 | 519 | 1 | 485 | 0.0 | 721 |
| Msa1101720 | MtrunA17_Chr2g0331381 | 64.007 | 539 | 131 | 3 | 10 | 548 | 7 | 482 | 0.0 | 695 |
| Msa1101720 | MtrunA17_Chr6g0462681 | 56.149 | 618 | 266 | 4 | 1 | 617 | 1 | 614 | 0.0 | 687 |
| Msa1101720 | MtrunA17_Chr7g0223541 | 61.651 | 545 | 205 | 4 | 74 | 617 | 31 | 572 | 0.0 | 687 |
| Msa1101720 | MtrunA17_Chr7g0223681 | 63.188 | 527 | 191 | 2 | 91 | 617 | 2 | 525 | 0.0 | 681 |
| Msa1101720 | MtrunA17_Chr6g0462601 | 56.796 | 618 | 262 | 4 | 1 | 617 | 1 | 614 | 0.0 | 675 |
| Msa1101720 | MtrunA17_Chr1g0166551 | 57.447 | 611 | 146 | 5 | 9 | 618 | 5 | 502 | 0.0 | 672 |
| Msa1101720 | MtrunA17_Chr6g0462711 | 54.797 | 615 | 269 | 5 | 9 | 617 | 10 | 621 | 0.0 | 645 |
| Msa1101720 | MtrunA17_Chr2g0284681 | 57.932 | 561 | 227 | 4 | 9 | 562 | 8 | 566 | 0.0 | 642 |
| Msa1101720 | MtrunA17_Chr2g0293561 | 78.780 | 377 | 80 | 0 | 1 | 377 | 1 | 377 | 0.0 | 639 |
| Msa1101720 | MtrunA17_Chr6g0462641 | 52.970 | 623 | 283 | 5 | 1 | 617 | 1 | 619 | 0.0 | 633 |
| Msa1101720 | MtrunA17_Chr8g0388761 | 54.344 | 587 | 257 | 8 | 7 | 589 | 36 | 615 | 0.0 | 624 |
| Msa1101720 | MtrunA17_Chr8g0388671 | 54.514 | 587 | 256 | 8 | 7 | 589 | 36 | 615 | 0.0 | 624 |
| Msa1101720 | MtrunA17_Chr6g0462771 | 53.659 | 615 | 275 | 5 | 9 | 617 | 9 | 619 | 0.0 | 623 |
| Msa1101720 | MtrunA17_Chr6g0462611 | 53.493 | 544 | 250 | 3 | 74 | 617 | 22 | 562 | 0.0 | 573 |
| Msa1101720 | MtrunA17_Chr2g0299821 | 64.467 | 394 | 136 | 2 | 1 | 392 | 1 | 392 | 0.0 | 526 |
| Msa1101720 | MtrunA17_Chr2g0299821 | 51.087 | 92 | 36 | 3 | 453 | 536 | 390 | 480 | 4.62e-17 | 84.3 |
| Msa1101720 | MtrunA17_Chr2g0293271 | 60.412 | 437 | 103 | 3 | 21 | 457 | 43 | 409 | 0.0 | 521 |
| Msa1101720 | MtrunA17_Chr2g0299921 | 68.274 | 394 | 121 | 2 | 3 | 396 | 1023 | 1412 | 1.37e-180 | 557 |
| Msa1101720 | MtrunA17_Chr2g0299921 | 66.751 | 394 | 126 | 3 | 3 | 395 | 1407 | 1796 | 2.10e-167 | 521 |
| Msa1101720 | MtrunA17_Chr2g0299851 | 67.179 | 390 | 124 | 2 | 1 | 390 | 1030 | 1415 | 8.03e-179 | 544 |
| Msa1101720 | MtrunA17_Chr2g0299791 | 66.581 | 389 | 126 | 2 | 1 | 389 | 1034 | 1418 | 6.30e-176 | 536 |
| Msa1101720 | MtrunA17_Chr1g0151991 | 78.351 | 291 | 63 | 0 | 1 | 291 | 1 | 291 | 7.61e-168 | 479 |
| Msa1101720 | MtrunA17_Chr2g0299881 | 65.974 | 385 | 123 | 3 | 9 | 389 | 1038 | 1418 | 2.00e-166 | 513 |
| Msa1101720 | MtrunA17_Chr2g0299881 | 56.164 | 73 | 30 | 1 | 180 | 250 | 1403 | 1475 | 2.53e-17 | 86.7 |
| Msa1101720 | MtrunA17_Chr2g0279901 | 46.299 | 581 | 282 | 13 | 10 | 582 | 57 | 615 | 2.49e-163 | 483 |
| Msa1101720 | MtrunA17_Chr6g0462861 | 43.891 | 622 | 317 | 10 | 6 | 617 | 6 | 605 | 1.96e-160 | 474 |
| Msa1101720 | MtrunA17_Chr7g0245521 | 78.388 | 273 | 59 | 0 | 1 | 273 | 1 | 273 | 2.20e-157 | 452 |
| Msa1101720 | MtrunA17_Chr4g0049501 | 44.940 | 583 | 288 | 14 | 10 | 582 | 54 | 613 | 4.58e-156 | 464 |
| Msa1101720 | MtrunA17_Chr7g0245531 | 69.329 | 313 | 94 | 2 | 305 | 617 | 2 | 312 | 2.64e-151 | 438 |
| Msa1101720 | MtrunA17_Chr2g0277021 | 45.081 | 559 | 285 | 11 | 10 | 562 | 72 | 614 | 1.56e-150 | 451 |
| Msa1101720 | MtrunA17_Chr7g0223761 | 58.047 | 379 | 115 | 3 | 241 | 618 | 3 | 338 | 4.56e-145 | 424 |
| Msa1101720 | MtrunA17_Chr1g0152001 | 63.333 | 300 | 107 | 2 | 315 | 614 | 1 | 297 | 3.34e-130 | 385 |
| Msa1101720 | MtrunA17_Chr1g0188611 | 63.300 | 297 | 101 | 2 | 322 | 618 | 1 | 289 | 3.90e-115 | 345 |
| Msa1101720 | MtrunA17_Chr1g0188601 | 82.199 | 191 | 34 | 0 | 92 | 282 | 1 | 191 | 2.46e-109 | 327 |
| Msa1101720 | MtrunA17_Chr6g0462631 | 52.077 | 313 | 107 | 3 | 100 | 411 | 22 | 292 | 3.85e-98 | 301 |
| Msa1101720 | MtrunA17_Chr7g0223671 | 72.340 | 188 | 52 | 0 | 74 | 261 | 8 | 195 | 1.05e-97 | 297 |
| Msa1101720 | MtrunA17_Chr6g0462751 | 48.555 | 346 | 118 | 4 | 67 | 409 | 12 | 300 | 4.01e-97 | 300 |
| Msa1101720 | MtrunA17_Chr7g0223771 | 78.431 | 153 | 33 | 0 | 93 | 245 | 1 | 153 | 7.26e-84 | 259 |
| Msa1101720 | MtrunA17_Chr5g0394391 | 35.516 | 504 | 297 | 14 | 9 | 495 | 29 | 521 | 9.04e-82 | 268 |
| Msa1101720 | MtrunA17_Chr7g0245541 | 62.687 | 201 | 73 | 2 | 417 | 617 | 1 | 199 | 2.55e-78 | 246 |
| Msa1101720 | MtrunA17_Chr7g0223861 | 82.443 | 131 | 23 | 0 | 78 | 208 | 4 | 134 | 1.08e-73 | 232 |
| Msa1101720 | MtrunA17_Chr4g0004331 | 33.827 | 405 | 261 | 6 | 10 | 411 | 4 | 404 | 1.50e-73 | 252 |
| Msa1101720 | MtrunA17_Chr4g0046881 | 78.723 | 141 | 27 | 1 | 135 | 275 | 14 | 151 | 2.30e-73 | 232 |
| Msa1101720 | MtrunA17_Chr3g0098761 | 29.878 | 492 | 331 | 8 | 10 | 497 | 4 | 485 | 4.07e-70 | 241 |
| Msa1101720 | MtrunA17_Chr2g0331901 | 32.110 | 436 | 277 | 8 | 10 | 431 | 4 | 434 | 5.26e-70 | 243 |
| Msa1101720 | MtrunA17_Chr6g0462791 | 61.932 | 176 | 66 | 1 | 108 | 283 | 1 | 175 | 1.96e-69 | 223 |
| Msa1101720 | MtrunA17_Chr5g0444001 | 32.401 | 429 | 278 | 6 | 10 | 431 | 4 | 427 | 1.02e-68 | 233 |
| Msa1101720 | MtrunA17_Chr4g0064621 | 33.529 | 510 | 303 | 17 | 9 | 492 | 140 | 639 | 4.34e-58 | 207 |
| Msa1101720 | MtrunA17_Chr5g0394221 | 38.176 | 296 | 164 | 6 | 299 | 588 | 69 | 351 | 1.44e-54 | 189 |
| Msa1101720 | MtrunA17_Chr3g0120101 | 27.186 | 526 | 345 | 11 | 7 | 499 | 24 | 544 | 5.42e-54 | 198 |
| Msa1101720 | MtrunA17_Chr6g0481391 | 70.492 | 122 | 33 | 1 | 38 | 159 | 13 | 131 | 2.56e-52 | 176 |
| Msa1101720 | MtrunA17_Chr6g0462701 | 53.801 | 171 | 55 | 1 | 100 | 270 | 22 | 168 | 7.36e-52 | 176 |
| Msa1101720 | MtrunA17_Chr4g0060241 | 27.811 | 507 | 328 | 14 | 10 | 498 | 21 | 507 | 8.22e-47 | 173 |
| Msa1101720 | MtrunA17_Chr5g0442171 | 33.934 | 333 | 192 | 12 | 170 | 488 | 1 | 319 | 1.85e-44 | 161 |
| Msa1101720 | MtrunA17_Chr4g0046871 | 75.758 | 99 | 24 | 0 | 339 | 437 | 9 | 107 | 2.76e-44 | 153 |
| Msa1101720 | MtrunA17_Chr6g0462691 | 52.817 | 142 | 66 | 1 | 322 | 462 | 1 | 142 | 9.59e-43 | 151 |
| Msa1101720 | MtrunA17_Chr5g0394231 | 36.404 | 228 | 92 | 5 | 74 | 299 | 5 | 181 | 3.49e-37 | 136 |
| Msa1101720 | MtrunA17_Chr1g0188591 | 80.822 | 73 | 14 | 0 | 1 | 73 | 1 | 73 | 1.63e-35 | 128 |
| Msa1101720 | MtrunA17_Chr7g0223691 | 75.342 | 73 | 18 | 0 | 1 | 73 | 1 | 73 | 1.52e-32 | 119 |
| Msa1101720 | MtrunA17_Chr7g0223871 | 48.819 | 127 | 65 | 0 | 492 | 618 | 7 | 133 | 5.28e-32 | 120 |
| Msa1101720 | MtrunA17_Chr6g0481381 | 71.622 | 74 | 21 | 0 | 176 | 249 | 1 | 74 | 5.65e-32 | 122 |
| Msa1101720 | MtrunA17_Chr6g0481381 | 56.842 | 95 | 41 | 0 | 516 | 610 | 75 | 169 | 1.48e-29 | 115 |
| Msa1101720 | MtrunA17_Chr7g0223791 | 47.727 | 132 | 59 | 2 | 441 | 572 | 58 | 179 | 1.78e-30 | 117 |
| Msa1101720 | MtrunA17_Chr7g0223791 | 67.901 | 81 | 18 | 3 | 56 | 136 | 18 | 90 | 8.35e-27 | 107 |
| Msa1101720 | MtrunA17_Chr7g0223881 | 65.854 | 82 | 27 | 1 | 281 | 362 | 2 | 82 | 4.99e-29 | 110 |
| Msa1101720 | MtrunA17_Chr6g0462621 | 67.123 | 73 | 22 | 1 | 1 | 73 | 1 | 71 | 9.54e-27 | 103 |
| Msa1101720 | MtrunA17_Chr7g0223661 | 42.241 | 116 | 24 | 1 | 315 | 430 | 1 | 73 | 8.41e-20 | 84.3 |
| Msa1101720 | MtrunA17_Chr7g0221651 | 46.429 | 84 | 45 | 0 | 215 | 298 | 1 | 84 | 2.30e-19 | 83.2 |
| Msa1101720 | MtrunA17_Chr6g0462801 | 59.091 | 66 | 22 | 1 | 322 | 382 | 1 | 66 | 8.59e-17 | 75.5 |
| Msa1101720 | MtrunA17_Chr2g0299891 | 76.744 | 43 | 10 | 0 | 315 | 357 | 1 | 43 | 1.63e-16 | 74.3 |
| Msa1101720 | MtrunA17_Chr5g0442161 | 32.680 | 153 | 96 | 4 | 9 | 157 | 28 | 177 | 1.87e-16 | 77.8 |
| Msa1101720 | MtrunA17_Chr4g0064651 | 40.860 | 93 | 53 | 2 | 397 | 488 | 29 | 120 | 2.96e-16 | 75.5 |
| Msa1101720 | MtrunA17_Chr2g0284661 | 50.602 | 83 | 40 | 1 | 368 | 449 | 61 | 143 | 1.30e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101720 | AT3G12580.1 | 64.297 | 619 | 215 | 5 | 1 | 617 | 1 | 615 | 0.0 | 809 |
| Msa1101720 | AT5G02500.1 | 63.651 | 619 | 219 | 5 | 1 | 617 | 1 | 615 | 0.0 | 804 |
| Msa1101720 | AT3G09440.1 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101720 | AT3G09440.4 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101720 | AT3G09440.2 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101720 | AT3G09440.3 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101720 | AT5G02490.1 | 63.328 | 619 | 221 | 5 | 1 | 617 | 1 | 615 | 0.0 | 796 |
| Msa1101720 | AT1G56410.1 | 63.813 | 619 | 216 | 6 | 1 | 617 | 1 | 613 | 0.0 | 792 |
| Msa1101720 | AT1G16030.1 | 61.551 | 619 | 231 | 6 | 1 | 617 | 1 | 614 | 0.0 | 771 |
| Msa1101720 | AT5G28540.1 | 54.160 | 613 | 269 | 9 | 7 | 615 | 35 | 639 | 0.0 | 635 |
| Msa1101720 | AT5G42020.1 | 53.997 | 613 | 270 | 9 | 7 | 615 | 35 | 639 | 0.0 | 634 |
| Msa1101720 | AT5G42020.3 | 53.997 | 613 | 270 | 9 | 7 | 615 | 40 | 644 | 0.0 | 633 |
| Msa1101720 | AT1G09080.1 | 53.958 | 619 | 264 | 9 | 7 | 613 | 50 | 659 | 0.0 | 625 |
| Msa1101720 | AT1G09080.2 | 53.958 | 619 | 264 | 9 | 7 | 613 | 40 | 649 | 0.0 | 625 |
| Msa1101720 | AT5G02500.2 | 73.265 | 389 | 102 | 1 | 1 | 389 | 1 | 387 | 0.0 | 607 |
| Msa1101720 | AT5G42020.2 | 49.592 | 613 | 242 | 11 | 7 | 615 | 35 | 584 | 0.0 | 555 |
| Msa1101720 | AT5G09590.1 | 44.026 | 611 | 302 | 15 | 10 | 612 | 60 | 638 | 4.81e-153 | 457 |
| Msa1101720 | AT4G37910.1 | 46.127 | 581 | 284 | 13 | 10 | 582 | 55 | 614 | 5.57e-152 | 454 |
| Msa1101720 | AT4G37910.2 | 46.127 | 581 | 284 | 13 | 10 | 582 | 55 | 614 | 5.57e-152 | 454 |
| Msa1101720 | AT4G24280.1 | 44.118 | 578 | 299 | 12 | 10 | 581 | 81 | 640 | 3.39e-150 | 451 |
| Msa1101720 | AT5G49910.1 | 45.081 | 559 | 285 | 11 | 10 | 562 | 81 | 623 | 3.16e-148 | 446 |
| Msa1101720 | AT2G32120.1 | 34.195 | 503 | 298 | 13 | 9 | 497 | 30 | 513 | 2.35e-74 | 248 |
| Msa1101720 | AT2G32120.2 | 34.195 | 503 | 298 | 13 | 9 | 497 | 30 | 513 | 2.35e-74 | 248 |
| Msa1101720 | AT1G79930.2 | 32.075 | 477 | 300 | 9 | 10 | 469 | 4 | 473 | 2.40e-73 | 251 |
| Msa1101720 | AT1G79920.3 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101720 | AT1G79920.2 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101720 | AT1G79920.4 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101720 | AT1G79920.1 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 4.14e-73 | 249 |
| Msa1101720 | AT1G79930.1 | 32.075 | 477 | 300 | 9 | 10 | 469 | 4 | 473 | 5.95e-73 | 251 |
| Msa1101720 | AT1G11660.4 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101720 | AT1G11660.3 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101720 | AT1G11660.1 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101720 | AT1G11660.2 | 34.239 | 368 | 236 | 5 | 46 | 410 | 1 | 365 | 1.87e-63 | 223 |
| Msa1101720 | AT4G16660.2 | 25.714 | 525 | 355 | 10 | 6 | 499 | 47 | 567 | 2.21e-55 | 202 |
| Msa1101720 | AT4G16660.1 | 25.714 | 525 | 355 | 10 | 6 | 499 | 23 | 543 | 3.10e-55 | 202 |
Find 139 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTCTTTCACTCTTTC+TGG | -0.002130 | 7_3:+32668744 | Msa1101720:CDS |
| TACTGTATTCTGCTTCTTTA+AGG | 0.110951 | 7_3:+32669357 | Msa1101720:three_prime_UTR |
| CTCAACCTCCTTAGGGCTTT+TGG | 0.111076 | 7_3:-32668150 | None:intergenic |
| TGAGGTCGATGCTTTGTTTC+AGG | 0.236745 | 7_3:+32668227 | Msa1101720:CDS |
| CAAAATCTTTAAAACGAAAA+TGG | 0.243676 | 7_3:-32666434 | None:intergenic |
| TCCTTGTTGGTGGATCTTCT+AGG | 0.269778 | 7_3:+32668385 | Msa1101720:CDS |
| TGCAATAGTTGCTGCACTTT+AGG | 0.278166 | 7_3:-32668411 | None:intergenic |
| GCAAGTGACAATCATCTTCT+TGG | 0.280969 | 7_3:+32668726 | Msa1101720:CDS |
| ACAGATGCCAAGAGGCTAAT+TGG | 0.308993 | 7_3:+32667574 | Msa1101720:intron |
| ACGCAGTTCTCAACCTCCTT+AGG | 0.321307 | 7_3:-32668158 | None:intergenic |
| AGTATGTATGAGCGCATTAT+AGG | 0.322524 | 7_3:+32669182 | Msa1101720:CDS |
| ACATCGATCAACACCAAGTT+TGG | 0.331418 | 7_3:-32668543 | None:intergenic |
| CGCTTATGGCGCAGCTGTCC+AGG | 0.334122 | 7_3:+32668488 | Msa1101720:CDS |
| GGAGATTGCAGAGGCATATC+TGG | 0.336106 | 7_3:+32667759 | Msa1101720:CDS |
| CCTGATGAGGCAATCGCTTA+TGG | 0.336355 | 7_3:+32668474 | Msa1101720:CDS |
| TGTGTCTCTTCTTACAATTA+AGG | 0.339763 | 7_3:+32667999 | Msa1101720:CDS |
| AACCCAGAAAACACTGTCTT+TGG | 0.348697 | 7_3:+32667217 | Msa1101720:CDS |
| ATAGATGCTGGTGTCATTGC+TGG | 0.352626 | 7_3:+32667850 | Msa1101720:CDS |
| AAATGAAAGTGATGTTCTTC+AGG | 0.352646 | 7_3:+32669139 | Msa1101720:CDS |
| GTTGATGATGTTGTCCTTGT+TGG | 0.355323 | 7_3:+32668372 | Msa1101720:CDS |
| CCATAAGCGATTGCCTCATC+AGG | 0.366584 | 7_3:-32668474 | None:intergenic |
| AAAGATGAAGGATGTGCTAT+TGG | 0.373706 | 7_3:+32667028 | Msa1101720:CDS |
| TAAAGTGCAGCAACTATTGC+AGG | 0.380400 | 7_3:+32668413 | Msa1101720:CDS |
| TGCTGAGGAAATCTCGTCTA+TGG | 0.383573 | 7_3:+32667720 | Msa1101720:CDS |
| TATTGATTTGTCTTCTTGAC+AGG | 0.384471 | 7_3:-32668639 | None:intergenic |
| AGCAATGACACCAGCATCTA+TGG | 0.384494 | 7_3:-32667848 | None:intergenic |
| ATGAAAAGTGAGATTGAGTT+TGG | 0.390787 | 7_3:-32666376 | None:intergenic |
| CGCAGTTCTCAACCTCCTTA+GGG | 0.394218 | 7_3:-32668157 | None:intergenic |
| CTGCGTGCGAGAAGGCAAAA+AGG | 0.396025 | 7_3:+32668175 | Msa1101720:CDS |
| TATGGTTAATACTTGAGGTT+TGG | 0.396886 | 7_3:+32669385 | Msa1101720:three_prime_UTR |
| CTCCTGTCCCTTGTACTTGA+GGG | 0.399012 | 7_3:-32667686 | None:intergenic |
| CTGGTGGAAACACTCACCTT+GGG | 0.401415 | 7_3:+32668046 | Msa1101720:CDS |
| AATGGTTCAAAATGAGATCT+TGG | 0.402519 | 7_3:-32666416 | None:intergenic |
| TCTTCTTACAATTAAGGATA+AGG | 0.404002 | 7_3:+32668005 | Msa1101720:CDS |
| GCTCAAGAGGAACGGTTGAT+TGG | 0.410428 | 7_3:+32667166 | Msa1101720:CDS |
| CGACAACCTTCCTATGTCAT+TGG | 0.412744 | 7_3:-32668889 | None:intergenic |
| TCTCCATGCACTCATTAAAA+AGG | 0.412944 | 7_3:-32668305 | None:intergenic |
| GAATGATTAGTTAATATTTG+TGG | 0.422386 | 7_3:+32669295 | Msa1101720:three_prime_UTR |
| GGATAAGGTCTTCGAAGTTA+AGG | 0.423231 | 7_3:+32668020 | Msa1101720:CDS |
| GGATGGCCACGAGCAGCTGC+AGG | 0.428028 | 7_3:-32668774 | None:intergenic |
| TGGCCATTCAAAGTCATTGC+GGG | 0.429564 | 7_3:+32667640 | Msa1101720:CDS |
| TGCTTTGATGTCGATCAAAA+TGG | 0.429626 | 7_3:+32668807 | Msa1101720:CDS |
| TGTCAATTAAGACACTTGTT+TGG | 0.436784 | 7_3:-32668680 | None:intergenic |
| AATCTCTCGTGCAAAGTTTG+AGG | 0.447581 | 7_3:+32668269 | Msa1101720:CDS |
| GAGGCTTACCGTATCGATGA+TGG | 0.448991 | 7_3:+32668945 | Msa1101720:CDS |
| CACCTCGAATGTTCCAAACT+TGG | 0.450052 | 7_3:+32668530 | Msa1101720:CDS |
| CTTCCTACCAATTAGCCTCT+TGG | 0.451481 | 7_3:-32667581 | None:intergenic |
| AGATGATTGTCACTTGCTCT+TGG | 0.452190 | 7_3:-32668720 | None:intergenic |
| CTATTGCAGGACTTCTTCTA+CGG | 0.461154 | 7_3:+32668426 | Msa1101720:CDS |
| GAGGTCGATGCTTTGTTTCA+GGG | 0.461220 | 7_3:+32668228 | Msa1101720:CDS |
| ACGCCCGCAATGACTTTGAA+TGG | 0.462078 | 7_3:-32667643 | None:intergenic |
| CTTTGTTGCTTTCGCTCAAG+AGG | 0.462984 | 7_3:+32667153 | Msa1101720:CDS |
| TATGAGATAAGGCGTCTTGT+TGG | 0.464947 | 7_3:-32666347 | None:intergenic |
| GATGATGTTGTCCTTGTTGG+TGG | 0.468097 | 7_3:+32668375 | Msa1101720:CDS |
| GAGATTATTCACAATGATCA+AGG | 0.469218 | 7_3:+32667112 | Msa1101720:CDS |
| TTTGTCTTTGACCTTGGTGG+TGG | 0.469354 | 7_3:+32667967 | Msa1101720:CDS |
| ATCAAGCAAATTTGCGGCCA+CGG | 0.470005 | 7_3:-32669102 | None:intergenic |
| ACATCAAAGCATACATCAAA+AGG | 0.475211 | 7_3:-32668795 | None:intergenic |
| GAAGTTAATACATGATGTCT+TGG | 0.476092 | 7_3:+32668587 | Msa1101720:CDS |
| TGAGAATCGTTGAAATAAGC+AGG | 0.477964 | 7_3:-32667814 | None:intergenic |
| TCTTGGGTGTGGTGATTCCT+AGG | 0.481383 | 7_3:+32668604 | Msa1101720:CDS |
| TTCAGAAGAAAACAAGAAGA+TGG | 0.482093 | 7_3:+32669067 | Msa1101720:CDS |
| TCTCCTGTCCCTTGTACTTG+AGG | 0.482957 | 7_3:-32667687 | None:intergenic |
| ACTGCTGCAGCTATTGCATA+TGG | 0.483888 | 7_3:+32667904 | Msa1101720:CDS |
| ATCCACATCAAGCAAATTTG+CGG | 0.484545 | 7_3:-32669108 | None:intergenic |
| GGCTGAAGTCATGAATGCTC+TGG | 0.489484 | 7_3:+32668983 | Msa1101720:CDS |
| TTGTCTTTGACCTTGGTGGT+GGG | 0.491381 | 7_3:+32667968 | Msa1101720:CDS |
| AGAGGACTTTGATAATAGAA+TGG | 0.500038 | 7_3:+32668071 | Msa1101720:CDS |
| GATGTCGCACCACTGTCTCT+TGG | 0.500080 | 7_3:+32668561 | Msa1101720:CDS |
| ACAGGAATTGAAGTGTTCCT+AGG | 0.500444 | 7_3:-32668621 | None:intergenic |
| AAAGTTTGAGGAGATCAATA+TGG | 0.505480 | 7_3:+32668281 | Msa1101720:CDS |
| GTCTTCGAAGTTAAGGCCAC+TGG | 0.522470 | 7_3:+32668027 | Msa1101720:CDS |
| CATTATAGGCAAGTCCTGCT+AGG | 0.523311 | 7_3:+32669196 | Msa1101720:CDS |
| TGTCTTAATTGACATCTATG+AGG | 0.526959 | 7_3:+32668689 | Msa1101720:CDS |
| AAGCTCGTTCTTACTATCAG+TGG | 0.530723 | 7_3:-32668859 | None:intergenic |
| GAGAAATGTGTTGAAGAAGA+AGG | 0.531211 | 7_3:+32669025 | Msa1101720:CDS |
| CACCAAGTTTGGAACATTCG+AGG | 0.533491 | 7_3:-32668532 | None:intergenic |
| TTTGGTGTTGGTATGAGATA+AGG | 0.533782 | 7_3:-32666358 | None:intergenic |
| TTCCCTCAAGTACAAGGGAC+AGG | 0.533865 | 7_3:+32667684 | Msa1101720:CDS |
| GATGATTTCCCTCAAGTACA+AGG | 0.534895 | 7_3:+32667678 | Msa1101720:CDS |
| TCGCACCACTGTCTCTTGGT+TGG | 0.536532 | 7_3:+32668565 | Msa1101720:CDS |
| ACTGGTGGAAACACTCACCT+TGG | 0.538678 | 7_3:+32668045 | Msa1101720:CDS |
| GGCCGCAAATTTGCTTGATG+TGG | 0.539872 | 7_3:+32669106 | Msa1101720:CDS |
| TGATGGGAAATTCTTGAGAA+AGG | 0.545073 | 7_3:+32668962 | Msa1101720:CDS |
| AAGGTGAGTGTTTCCACCAG+TGG | 0.547001 | 7_3:-32668043 | None:intergenic |
| AGTGAGATTGAGTTTGGTGT+TGG | 0.548069 | 7_3:-32666370 | None:intergenic |
| AGAAAAGCCACCATAGATGC+TGG | 0.548590 | 7_3:+32667838 | Msa1101720:CDS |
| TGCTGTTGTCACCAATGTTG+AGG | 0.549124 | 7_3:+32668209 | Msa1101720:CDS |
| TATTAACTAATCATTCATAG+AGG | 0.552247 | 7_3:-32669288 | None:intergenic |
| AGAGGCATATCTGGAATCAC+TGG | 0.554460 | 7_3:+32667768 | Msa1101720:CDS |
| TATGCAATAGCTGCAGCAGT+TGG | 0.558562 | 7_3:-32667901 | None:intergenic |
| TTGCTTTCGCTCAAGAGGAA+CGG | 0.559950 | 7_3:+32667158 | Msa1101720:CDS |
| AAGTTAATACATGATGTCTT+GGG | 0.562861 | 7_3:+32668588 | Msa1101720:CDS |
| AGAATTTCCCATCATCGATA+CGG | 0.568365 | 7_3:-32668953 | None:intergenic |
| TGAGCGAAAGCAACAAAGGA+AGG | 0.574959 | 7_3:-32667148 | None:intergenic |
| GATGGCCACGAGCAGCTGCA+GGG | 0.575202 | 7_3:-32668773 | None:intergenic |
| AGGCTTACCGTATCGATGAT+GGG | 0.575473 | 7_3:+32668946 | Msa1101720:CDS |
| TTCGAAGTTAAGGCCACTGG+TGG | 0.576585 | 7_3:+32668030 | Msa1101720:CDS |
| TATGGTACTCACAAAGATGC+GGG | 0.579590 | 7_3:+32667738 | Msa1101720:CDS |
| CAAAGCATCGACCTCAACAT+TGG | 0.580273 | 7_3:-32668220 | None:intergenic |
| CTCTTGAGCGAAAGCAACAA+AGG | 0.582705 | 7_3:-32667152 | None:intergenic |
| ATGGCCACGAGCAGCTGCAG+GGG | 0.583174 | 7_3:-32668772 | None:intergenic |
| ATCATCGATACGGTAAGCCT+CGG | 0.588087 | 7_3:-32668943 | None:intergenic |
| GTTGAGAACTGCGTGCGAGA+AGG | 0.591918 | 7_3:+32668167 | Msa1101720:CDS |
| TTGGGAACCCAAAAGCCCTA+AGG | 0.593146 | 7_3:+32668142 | Msa1101720:CDS |
| CTTACAATAACCAATGACAT+AGG | 0.595828 | 7_3:+32668879 | Msa1101720:CDS |
| TGTGCTATTGGAATAGACCT+TGG | 0.601062 | 7_3:+32667040 | Msa1101720:CDS |
| TGGTGGAAACACTCACCTTG+GGG | 0.601557 | 7_3:+32668047 | Msa1101720:CDS |
| GTCTTAATTGACATCTATGA+GGG | 0.602609 | 7_3:+32668690 | Msa1101720:CDS |
| TATTGCAGGACTTCTTCTAC+GGG | 0.603960 | 7_3:+32668427 | Msa1101720:CDS |
| CAATAACCAATGACATAGGA+AGG | 0.605155 | 7_3:+32668883 | Msa1101720:CDS |
| ATGCCAAGAGGCTAATTGGT+AGG | 0.605854 | 7_3:+32667578 | Msa1101720:CDS |
| GCAGGACTTCTTCTACGGGA+AGG | 0.609093 | 7_3:+32668431 | Msa1101720:CDS |
| GTGGCCATTCAAAGTCATTG+CGG | 0.612672 | 7_3:+32667639 | Msa1101720:CDS |
| AAGATTGATTGAAGAAGCCG+AGG | 0.612741 | 7_3:+32668926 | Msa1101720:CDS |
| TATTTGAAGACTTACAATGC+AGG | 0.614305 | 7_3:-32669414 | None:intergenic |
| CAAAGCATACATCAAAAGGA+TGG | 0.615551 | 7_3:-32668791 | None:intergenic |
| TGGCCACGAGCAGCTGCAGG+GGG | 0.617063 | 7_3:-32668771 | None:intergenic |
| TAGGAAGTTTACTGATCCTG+TGG | 0.621004 | 7_3:+32667597 | Msa1101720:CDS |
| CAAGAGCATCAACCCTGATG+AGG | 0.621114 | 7_3:+32668461 | Msa1101720:CDS |
| TTGTACTTGAGGGAAATCAT+CGG | 0.621700 | 7_3:-32667676 | None:intergenic |
| TTTCACTCAACAAAGCAGCC+TGG | 0.623218 | 7_3:-32668506 | None:intergenic |
| CATAAGCGATTGCCTCATCA+GGG | 0.623921 | 7_3:-32668473 | None:intergenic |
| GAAAAGAGAACTGACTGTGA+TGG | 0.633914 | 7_3:+32667931 | Msa1101720:CDS |
| CTATGGTACTCACAAAGATG+CGG | 0.635011 | 7_3:+32667737 | Msa1101720:CDS |
| GGAACCCAAAAGCCCTAAGG+AGG | 0.640087 | 7_3:+32668145 | Msa1101720:CDS |
| AATACATGATGTCTTGGGTG+TGG | 0.643033 | 7_3:+32668593 | Msa1101720:CDS |
| CGTACTCTTGTGTTGCTGTG+TGG | 0.655627 | 7_3:+32667068 | Msa1101720:CDS |
| TCCTAGAAGATCCACCAACA+AGG | 0.665374 | 7_3:-32668386 | None:intergenic |
| AATGACACCAGCATCTATGG+TGG | 0.667765 | 7_3:-32667845 | None:intergenic |
| GGTGGAAACACTCACCTTGG+GGG | 0.675471 | 7_3:+32668048 | Msa1101720:CDS |
| AAAGATGCGGGAGATTGCAG+AGG | 0.680528 | 7_3:+32667750 | Msa1101720:CDS |
| CACAAGAGTACGTAGTACCA+AGG | 0.684270 | 7_3:-32667057 | None:intergenic |
| ATGATTTCCCTCAAGTACAA+GGG | 0.686901 | 7_3:+32667679 | Msa1101720:CDS |
| AACTTCCAACCAAGAGACAG+TGG | 0.687062 | 7_3:-32668570 | None:intergenic |
| CATCAAAAGTCCCACCACCA+AGG | 0.703356 | 7_3:-32667978 | None:intergenic |
| GATGGATACTGCAATTACCG+TGG | 0.724475 | 7_3:+32669085 | Msa1101720:CDS |
| GCTGTGTGGCATGAAGAACA+TGG | 0.753906 | 7_3:+32667082 | Msa1101720:CDS |
| AGTGCATGGAGACTGTTGAG+AGG | 0.754321 | 7_3:+32668316 | Msa1101720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACGATATAAACAT+AGG | - | chr7_3:32666491-32666510 | None:intergenic | 15.0% |
| !! | TTAAAAAGGTTTATTATTTG+TGG | + | chr7_3:32666664-32666683 | Msa1101720:intron | 15.0% |
| !!! | TACAAAATTTTATTGTTTCT+AGG | + | chr7_3:32666812-32666831 | Msa1101720:intron | 15.0% |
| !!! | TAAAGGTATATAATTAAGAA+AGG | + | chr7_3:32667286-32667305 | Msa1101720:intron | 15.0% |
| !!! | AAAAAAATTTAGATCCATTT+TGG | + | chr7_3:32667380-32667399 | Msa1101720:intron | 15.0% |
| !!! | CAAAATCTTTAAAACGAAAA+TGG | - | chr7_3:32666437-32666456 | None:intergenic | 20.0% |
| !!! | TAACTTTTCGTTTTTTGTTA+TGG | + | chr7_3:32666850-32666869 | Msa1101720:intron | 20.0% |
| !! | AATTAAGTGAATAAATGCTT+AGG | + | chr7_3:32666889-32666908 | Msa1101720:intron | 20.0% |
| !! | TACATTTGATTATTGAGTAA+AGG | + | chr7_3:32667269-32667288 | Msa1101720:intron | 20.0% |
| !! | TTTGATCTATGATATAATGT+TGG | + | chr7_3:32667337-32667356 | Msa1101720:intron | 20.0% |
| !!! | TATTTGAGACTTATAAGATT+AGG | + | chr7_3:32667448-32667467 | Msa1101720:intron | 20.0% |
| !! | AAAATACATGAAGATCTATT+TGG | - | chr7_3:32667497-32667516 | None:intergenic | 20.0% |
| !!! | TAGATCTTCATGTATTTTAT+TGG | + | chr7_3:32667499-32667518 | Msa1101720:intron | 20.0% |
| !! | TATTAACTAATCATTCATAG+AGG | - | chr7_3:32669291-32669310 | None:intergenic | 20.0% |
| !!! | GAATGATTAGTTAATATTTG+TGG | + | chr7_3:32669295-32669314 | Msa1101720:three_prime_UTR | 20.0% |
| !!! | TTTTATATGGTTAATACTTG+AGG | + | chr7_3:32669380-32669399 | Msa1101720:three_prime_UTR | 20.0% |
| ! | ATTTATGATTCAACACCATT+TGG | + | chr7_3:32666596-32666615 | Msa1101720:intron | 25.0% |
| ! | GTTTATTATTTGTGGTAGAA+AGG | + | chr7_3:32666672-32666691 | Msa1101720:intron | 25.0% |
| ! | CATGTTATATACGTTCTTTA+TGG | + | chr7_3:32666735-32666754 | Msa1101720:intron | 25.0% |
| !!! | TATGGATTCTATGTTGATTT+TGG | + | chr7_3:32666753-32666772 | Msa1101720:intron | 25.0% |
| !!! | CTTAATTTGTCAAACAGATA+AGG | - | chr7_3:32666876-32666895 | None:intergenic | 25.0% |
| !!! | ATAAATGCTTAGGTTTTAGA+TGG | + | chr7_3:32666899-32666918 | Msa1101720:intron | 25.0% |
| !!! | ATTTTGGTCCATCATTTTTT+GGG | + | chr7_3:32667396-32667415 | Msa1101720:intron | 25.0% |
| ! | AAAAATGTCCCAAAAAATGA+TGG | - | chr7_3:32667407-32667426 | None:intergenic | 25.0% |
| !! | TAAGATTAGGTTCTTACTTT+TGG | + | chr7_3:32667461-32667480 | Msa1101720:intron | 25.0% |
| !!! | TATTTTATTGGTGACTGATT+AGG | + | chr7_3:32667511-32667530 | Msa1101720:intron | 25.0% |
| ! | TACAAAAAGACATAATGTTG+TGG | + | chr7_3:32667620-32667639 | Msa1101720:CDS | 25.0% |
| !!! | AATATTTTTGTCTTTGACCT+TGG | + | chr7_3:32667961-32667980 | Msa1101720:CDS | 25.0% |
| ! | TCTTCTTACAATTAAGGATA+AGG | + | chr7_3:32668005-32668024 | Msa1101720:CDS | 25.0% |
| ! | GATCAAAAGGAAGAAAAATT+TGG | + | chr7_3:32668113-32668132 | Msa1101720:CDS | 25.0% |
| ! | AAGAAAAATTTGGACATCAT+TGG | + | chr7_3:32668123-32668142 | Msa1101720:CDS | 25.0% |
| ! | AGAAAAATTTGGACATCATT+GGG | + | chr7_3:32668124-32668143 | Msa1101720:CDS | 25.0% |
| ! | AAGTTAATACATGATGTCTT+GGG | + | chr7_3:32668588-32668607 | Msa1101720:CDS | 25.0% |
| !!! | TTCTCACTTGATATTTTAAG+TGG | + | chr7_3:32669227-32669246 | Msa1101720:three_prime_UTR | 25.0% |
| !!! | TGCTTCTTTAAGGTTTTATA+TGG | + | chr7_3:32669367-32669386 | Msa1101720:three_prime_UTR | 25.0% |
| ATGAAAAGTGAGATTGAGTT+TGG | - | chr7_3:32666379-32666398 | None:intergenic | 30.0% | |
| AATGGTTCAAAATGAGATCT+TGG | - | chr7_3:32666419-32666438 | None:intergenic | 30.0% | |
| ! | TCGTTTTCATTGCAAGATTA+TGG | + | chr7_3:32667000-32667019 | Msa1101720:intron | 30.0% |
| ATTATGGCGAAAAAAGATGA+AGG | + | chr7_3:32667016-32667035 | Msa1101720:exon | 30.0% | |
| GAGATTATTCACAATGATCA+AGG | + | chr7_3:32667112-32667131 | Msa1101720:CDS | 30.0% | |
| !! | CAAAAAATGATGGACCAAAA+TGG | - | chr7_3:32667397-32667416 | None:intergenic | 30.0% |
| !! | CATTTTGGTCCATCATTTTT+TGG | + | chr7_3:32667395-32667414 | Msa1101720:intron | 30.0% |
| ! | TTAATTTTACAGATGCCAAG+AGG | + | chr7_3:32667566-32667585 | Msa1101720:intron | 30.0% |
| ! | ATTATGTCTTTTTGTACCAC+AGG | - | chr7_3:32667616-32667635 | None:intergenic | 30.0% |
| TGTGTCTCTTCTTACAATTA+AGG | + | chr7_3:32667999-32668018 | Msa1101720:CDS | 30.0% | |
| ! | AGAGGACTTTGATAATAGAA+TGG | + | chr7_3:32668071-32668090 | Msa1101720:CDS | 30.0% |
| ! | AATGGTGAACTATTTTGTAG+AGG | + | chr7_3:32668089-32668108 | Msa1101720:CDS | 30.0% |
| ! | ATTTTGTAGAGGAGATCAAA+AGG | + | chr7_3:32668100-32668119 | Msa1101720:CDS | 30.0% |
| AAAGTTTGAGGAGATCAATA+TGG | + | chr7_3:32668281-32668300 | Msa1101720:CDS | 30.0% | |
| GAAGTTAATACATGATGTCT+TGG | + | chr7_3:32668587-32668606 | Msa1101720:CDS | 30.0% | |
| !! | TATTGATTTGTCTTCTTGAC+AGG | - | chr7_3:32668642-32668661 | None:intergenic | 30.0% |
| TGTCAATTAAGACACTTGTT+TGG | - | chr7_3:32668683-32668702 | None:intergenic | 30.0% | |
| TGTCTTAATTGACATCTATG+AGG | + | chr7_3:32668689-32668708 | Msa1101720:CDS | 30.0% | |
| GTCTTAATTGACATCTATGA+GGG | + | chr7_3:32668690-32668709 | Msa1101720:CDS | 30.0% | |
| ACATCAAAGCATACATCAAA+AGG | - | chr7_3:32668798-32668817 | None:intergenic | 30.0% | |
| !!! | TATTTTGACAGTTTCTGCTA+TGG | + | chr7_3:32668830-32668849 | Msa1101720:CDS | 30.0% |
| CTTACAATAACCAATGACAT+AGG | + | chr7_3:32668879-32668898 | Msa1101720:CDS | 30.0% | |
| TTCAGAAGAAAACAAGAAGA+TGG | + | chr7_3:32669067-32669086 | Msa1101720:CDS | 30.0% | |
| AAATGAAAGTGATGTTCTTC+AGG | + | chr7_3:32669139-32669158 | Msa1101720:CDS | 30.0% | |
| TACTGTATTCTGCTTCTTTA+AGG | + | chr7_3:32669357-32669376 | Msa1101720:three_prime_UTR | 30.0% | |
| TATGGTTAATACTTGAGGTT+TGG | + | chr7_3:32669385-32669404 | Msa1101720:three_prime_UTR | 30.0% | |
| TATTTGAAGACTTACAATGC+AGG | - | chr7_3:32669417-32669436 | None:intergenic | 30.0% | |
| !! | TTTGGTGTTGGTATGAGATA+AGG | - | chr7_3:32666361-32666380 | None:intergenic | 35.0% |
| ! | TTTTGCATCACTTTCCAGTA+AGG | + | chr7_3:32666452-32666471 | Msa1101720:intron | 35.0% |
| !!! | TTTTTTTTTGTGTGCGTGTG+TGG | + | chr7_3:32666508-32666527 | Msa1101720:intron | 35.0% |
| !!! | TCAACACCATTTGGTGTTTT+TGG | + | chr7_3:32666605-32666624 | Msa1101720:intron | 35.0% |
| ACCATTGCTTGAGCTTAAAA+AGG | + | chr7_3:32666650-32666669 | Msa1101720:intron | 35.0% | |
| !! | ACCTTTTTAAGCTCAAGCAA+TGG | - | chr7_3:32666654-32666673 | None:intergenic | 35.0% |
| ATACCCTTAATGTCATCAAC+AGG | - | chr7_3:32666948-32666967 | None:intergenic | 35.0% | |
| TCTTGCAATGAAAACGAACA+AGG | - | chr7_3:32666997-32667016 | None:intergenic | 35.0% | |
| AAAGATGAAGGATGTGCTAT+TGG | + | chr7_3:32667028-32667047 | Msa1101720:CDS | 35.0% | |
| ! | TACCAAAGACAGTGTTTTCT+GGG | - | chr7_3:32667222-32667241 | None:intergenic | 35.0% |
| ! | TTACCAAAGACAGTGTTTTC+TGG | - | chr7_3:32667223-32667242 | None:intergenic | 35.0% |
| TTGTACTTGAGGGAAATCAT+CGG | - | chr7_3:32667679-32667698 | None:intergenic | 35.0% | |
| ATGATTTCCCTCAAGTACAA+GGG | + | chr7_3:32667679-32667698 | Msa1101720:CDS | 35.0% | |
| TGAGAATCGTTGAAATAAGC+AGG | - | chr7_3:32667817-32667836 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCTTTGACCTTGG+TGG | + | chr7_3:32667964-32667983 | Msa1101720:CDS | 35.0% |
| TCTCCATGCACTCATTAAAA+AGG | - | chr7_3:32668308-32668327 | None:intergenic | 35.0% | |
| ! | GTGTTTTACTGATGCTAAGA+TGG | + | chr7_3:32668338-32668357 | Msa1101720:CDS | 35.0% |
| CAAAGCATACATCAAAAGGA+TGG | - | chr7_3:32668794-32668813 | None:intergenic | 35.0% | |
| TGCTTTGATGTCGATCAAAA+TGG | + | chr7_3:32668807-32668826 | Msa1101720:CDS | 35.0% | |
| CAATAACCAATGACATAGGA+AGG | + | chr7_3:32668883-32668902 | Msa1101720:CDS | 35.0% | |
| AGAATTTCCCATCATCGATA+CGG | - | chr7_3:32668956-32668975 | None:intergenic | 35.0% | |
| TGATGGGAAATTCTTGAGAA+AGG | + | chr7_3:32668962-32668981 | Msa1101720:CDS | 35.0% | |
| GAGAAATGTGTTGAAGAAGA+AGG | + | chr7_3:32669025-32669044 | Msa1101720:CDS | 35.0% | |
| ATCCACATCAAGCAAATTTG+CGG | - | chr7_3:32669111-32669130 | None:intergenic | 35.0% | |
| AGTATGTATGAGCGCATTAT+AGG | + | chr7_3:32669182-32669201 | Msa1101720:CDS | 35.0% | |
| TGAGAACATAAAAACCTAGC+AGG | - | chr7_3:32669213-32669232 | None:intergenic | 35.0% | |
| ! | TATGAGATAAGGCGTCTTGT+TGG | - | chr7_3:32666350-32666369 | None:intergenic | 40.0% |
| !! | AGTGAGATTGAGTTTGGTGT+TGG | - | chr7_3:32666373-32666392 | None:intergenic | 40.0% |
| GAATGTTGACAGAACCTTAC+TGG | - | chr7_3:32666469-32666488 | None:intergenic | 40.0% | |
| TGCAAGCCAAAAACACCAAA+TGG | - | chr7_3:32666614-32666633 | None:intergenic | 40.0% | |
| !! | TCGTCCTGTTGATGACATTA+AGG | + | chr7_3:32666941-32666960 | Msa1101720:intron | 40.0% |
| !! | CGTCCTGTTGATGACATTAA+GGG | + | chr7_3:32666942-32666961 | Msa1101720:intron | 40.0% |
| ! | TGTGCTATTGGAATAGACCT+TGG | + | chr7_3:32667040-32667059 | Msa1101720:CDS | 40.0% |
| AACCCAGAAAACACTGTCTT+TGG | + | chr7_3:32667217-32667236 | Msa1101720:CDS | 40.0% | |
| TAGGAAGTTTACTGATCCTG+TGG | + | chr7_3:32667597-32667616 | Msa1101720:CDS | 40.0% | |
| GATGATTTCCCTCAAGTACA+AGG | + | chr7_3:32667678-32667697 | Msa1101720:CDS | 40.0% | |
| CTATGGTACTCACAAAGATG+CGG | + | chr7_3:32667737-32667756 | Msa1101720:CDS | 40.0% | |
| TATGGTACTCACAAAGATGC+GGG | + | chr7_3:32667738-32667757 | Msa1101720:CDS | 40.0% | |
| !! | TGCTGGTCTCAATGTTTTGA+AGG | + | chr7_3:32667867-32667886 | Msa1101720:CDS | 40.0% |
| ! | CACAGTCAGTTCTCTTTTCA+AGG | - | chr7_3:32667930-32667949 | None:intergenic | 40.0% |
| GAAAAGAGAACTGACTGTGA+TGG | + | chr7_3:32667931-32667950 | Msa1101720:CDS | 40.0% | |
| GGATAAGGTCTTCGAAGTTA+AGG | + | chr7_3:32668020-32668039 | Msa1101720:CDS | 40.0% | |
| AATCTCTCGTGCAAAGTTTG+AGG | + | chr7_3:32668269-32668288 | Msa1101720:CDS | 40.0% | |
| ! | GGACCTTTTTAATGAGTGCA+TGG | + | chr7_3:32668302-32668321 | Msa1101720:CDS | 40.0% |
| !! | GTTGATGATGTTGTCCTTGT+TGG | + | chr7_3:32668372-32668391 | Msa1101720:CDS | 40.0% |
| TGCAATAGTTGCTGCACTTT+AGG | - | chr7_3:32668414-32668433 | None:intergenic | 40.0% | |
| TAAAGTGCAGCAACTATTGC+AGG | + | chr7_3:32668413-32668432 | Msa1101720:CDS | 40.0% | |
| CTATTGCAGGACTTCTTCTA+CGG | + | chr7_3:32668426-32668445 | Msa1101720:CDS | 40.0% | |
| TATTGCAGGACTTCTTCTAC+GGG | + | chr7_3:32668427-32668446 | Msa1101720:CDS | 40.0% | |
| ACATCGATCAACACCAAGTT+TGG | - | chr7_3:32668546-32668565 | None:intergenic | 40.0% | |
| AATACATGATGTCTTGGGTG+TGG | + | chr7_3:32668593-32668612 | Msa1101720:CDS | 40.0% | |
| ! | ACAGGAATTGAAGTGTTCCT+AGG | - | chr7_3:32668624-32668643 | None:intergenic | 40.0% |
| ! | AGATGATTGTCACTTGCTCT+TGG | - | chr7_3:32668723-32668742 | None:intergenic | 40.0% |
| GCAAGTGACAATCATCTTCT+TGG | + | chr7_3:32668726-32668745 | Msa1101720:CDS | 40.0% | |
| ! | CTTGGTTCTTTCACTCTTTC+TGG | + | chr7_3:32668744-32668763 | Msa1101720:CDS | 40.0% |
| AAGCTCGTTCTTACTATCAG+TGG | - | chr7_3:32668862-32668881 | None:intergenic | 40.0% | |
| AAGATTGATTGAAGAAGCCG+AGG | + | chr7_3:32668926-32668945 | Msa1101720:CDS | 40.0% | |
| ! | CACAAGAGTACGTAGTACCA+AGG | - | chr7_3:32667060-32667079 | None:intergenic | 45.0% |
| TGAGCGAAAGCAACAAAGGA+AGG | - | chr7_3:32667151-32667170 | None:intergenic | 45.0% | |
| CTCTTGAGCGAAAGCAACAA+AGG | - | chr7_3:32667155-32667174 | None:intergenic | 45.0% | |
| !! | CTTTGTTGCTTTCGCTCAAG+AGG | + | chr7_3:32667153-32667172 | Msa1101720:CDS | 45.0% |
| TTGCTTTCGCTCAAGAGGAA+CGG | + | chr7_3:32667158-32667177 | Msa1101720:CDS | 45.0% | |
| ACAGATGCCAAGAGGCTAAT+TGG | + | chr7_3:32667574-32667593 | Msa1101720:intron | 45.0% | |
| ATGCCAAGAGGCTAATTGGT+AGG | + | chr7_3:32667578-32667597 | Msa1101720:CDS | 45.0% | |
| ! | CTTCCTACCAATTAGCCTCT+TGG | - | chr7_3:32667584-32667603 | None:intergenic | 45.0% |
| GTGGCCATTCAAAGTCATTG+CGG | + | chr7_3:32667639-32667658 | Msa1101720:CDS | 45.0% | |
| TGGCCATTCAAAGTCATTGC+GGG | + | chr7_3:32667640-32667659 | Msa1101720:CDS | 45.0% | |
| TGCTGAGGAAATCTCGTCTA+TGG | + | chr7_3:32667720-32667739 | Msa1101720:CDS | 45.0% | |
| ! | AGAGGCATATCTGGAATCAC+TGG | + | chr7_3:32667768-32667787 | Msa1101720:CDS | 45.0% |
| AGAAAAGCCACCATAGATGC+TGG | + | chr7_3:32667838-32667857 | Msa1101720:CDS | 45.0% | |
| AATGACACCAGCATCTATGG+TGG | - | chr7_3:32667848-32667867 | None:intergenic | 45.0% | |
| AGCAATGACACCAGCATCTA+TGG | - | chr7_3:32667851-32667870 | None:intergenic | 45.0% | |
| !! | ATAGATGCTGGTGTCATTGC+TGG | + | chr7_3:32667850-32667869 | Msa1101720:CDS | 45.0% |
| TATGCAATAGCTGCAGCAGT+TGG | - | chr7_3:32667904-32667923 | None:intergenic | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | + | chr7_3:32667904-32667923 | Msa1101720:CDS | 45.0% | |
| TTTGTCTTTGACCTTGGTGG+TGG | + | chr7_3:32667967-32667986 | Msa1101720:CDS | 45.0% | |
| ! | TTGTCTTTGACCTTGGTGGT+GGG | + | chr7_3:32667968-32667987 | Msa1101720:CDS | 45.0% |
| ! | TCAACCTCCTTAGGGCTTTT+GGG | - | chr7_3:32668152-32668171 | None:intergenic | 45.0% |
| TGCTGTTGTCACCAATGTTG+AGG | + | chr7_3:32668209-32668228 | Msa1101720:CDS | 45.0% | |
| !! | CAAAGCATCGACCTCAACAT+TGG | - | chr7_3:32668223-32668242 | None:intergenic | 45.0% |
| !! | TGAGGTCGATGCTTTGTTTC+AGG | + | chr7_3:32668227-32668246 | Msa1101720:CDS | 45.0% |
| !! | GAGGTCGATGCTTTGTTTCA+GGG | + | chr7_3:32668228-32668247 | Msa1101720:CDS | 45.0% |
| GATGATGTTGTCCTTGTTGG+TGG | + | chr7_3:32668375-32668394 | Msa1101720:CDS | 45.0% | |
| ! | TCCTTGTTGGTGGATCTTCT+AGG | + | chr7_3:32668385-32668404 | Msa1101720:CDS | 45.0% |
| TCCTAGAAGATCCACCAACA+AGG | - | chr7_3:32668389-32668408 | None:intergenic | 45.0% | |
| CATAAGCGATTGCCTCATCA+GGG | - | chr7_3:32668476-32668495 | None:intergenic | 45.0% | |
| TTTCACTCAACAAAGCAGCC+TGG | - | chr7_3:32668509-32668528 | None:intergenic | 45.0% | |
| CACCTCGAATGTTCCAAACT+TGG | + | chr7_3:32668530-32668549 | Msa1101720:CDS | 45.0% | |
| ! | CACCAAGTTTGGAACATTCG+AGG | - | chr7_3:32668535-32668554 | None:intergenic | 45.0% |
| AACTTCCAACCAAGAGACAG+TGG | - | chr7_3:32668573-32668592 | None:intergenic | 45.0% | |
| CGACAACCTTCCTATGTCAT+TGG | - | chr7_3:32668892-32668911 | None:intergenic | 45.0% | |
| ATCATCGATACGGTAAGCCT+CGG | - | chr7_3:32668946-32668965 | None:intergenic | 45.0% | |
| ! | AGGCTTACCGTATCGATGAT+GGG | + | chr7_3:32668946-32668965 | Msa1101720:CDS | 45.0% |
| GATGGATACTGCAATTACCG+TGG | + | chr7_3:32669085-32669104 | Msa1101720:CDS | 45.0% | |
| ATCAAGCAAATTTGCGGCCA+CGG | - | chr7_3:32669105-32669124 | None:intergenic | 45.0% | |
| CATTATAGGCAAGTCCTGCT+AGG | + | chr7_3:32669196-32669215 | Msa1101720:CDS | 45.0% | |
| ! | CGTACTCTTGTGTTGCTGTG+TGG | + | chr7_3:32667068-32667087 | Msa1101720:CDS | 50.0% |
| GCTGTGTGGCATGAAGAACA+TGG | + | chr7_3:32667082-32667101 | Msa1101720:CDS | 50.0% | |
| GCTCAAGAGGAACGGTTGAT+TGG | + | chr7_3:32667166-32667185 | Msa1101720:CDS | 50.0% | |
| ACGCCCGCAATGACTTTGAA+TGG | - | chr7_3:32667646-32667665 | None:intergenic | 50.0% | |
| TTCCCTCAAGTACAAGGGAC+AGG | + | chr7_3:32667684-32667703 | Msa1101720:CDS | 50.0% | |
| CTCCTGTCCCTTGTACTTGA+GGG | - | chr7_3:32667689-32667708 | None:intergenic | 50.0% | |
| TCTCCTGTCCCTTGTACTTG+AGG | - | chr7_3:32667690-32667709 | None:intergenic | 50.0% | |
| ! | GGAGAAGCTCTTTTGTGCTG+AGG | + | chr7_3:32667705-32667724 | Msa1101720:CDS | 50.0% |
| AAAGATGCGGGAGATTGCAG+AGG | + | chr7_3:32667750-32667769 | Msa1101720:CDS | 50.0% | |
| ! | GGAGATTGCAGAGGCATATC+TGG | + | chr7_3:32667759-32667778 | Msa1101720:CDS | 50.0% |
| CATCAAAAGTCCCACCACCA+AGG | - | chr7_3:32667981-32668000 | None:intergenic | 50.0% | |
| GTCTTCGAAGTTAAGGCCAC+TGG | + | chr7_3:32668027-32668046 | Msa1101720:CDS | 50.0% | |
| TTCGAAGTTAAGGCCACTGG+TGG | + | chr7_3:32668030-32668049 | Msa1101720:CDS | 50.0% | |
| AAGGTGAGTGTTTCCACCAG+TGG | - | chr7_3:32668046-32668065 | None:intergenic | 50.0% | |
| ACTGGTGGAAACACTCACCT+TGG | + | chr7_3:32668045-32668064 | Msa1101720:CDS | 50.0% | |
| CTGGTGGAAACACTCACCTT+GGG | + | chr7_3:32668046-32668065 | Msa1101720:CDS | 50.0% | |
| TGGTGGAAACACTCACCTTG+GGG | + | chr7_3:32668047-32668066 | Msa1101720:CDS | 50.0% | |
| TATCAAAGTCCTCTCCCCCA+AGG | - | chr7_3:32668065-32668084 | None:intergenic | 50.0% | |
| TTGGGAACCCAAAAGCCCTA+AGG | + | chr7_3:32668142-32668161 | Msa1101720:CDS | 50.0% | |
| ! | CTCAACCTCCTTAGGGCTTT+TGG | - | chr7_3:32668153-32668172 | None:intergenic | 50.0% |
| CGCAGTTCTCAACCTCCTTA+GGG | - | chr7_3:32668160-32668179 | None:intergenic | 50.0% | |
| ACGCAGTTCTCAACCTCCTT+AGG | - | chr7_3:32668161-32668180 | None:intergenic | 50.0% | |
| AGTGCATGGAGACTGTTGAG+AGG | + | chr7_3:32668316-32668335 | Msa1101720:CDS | 50.0% | |
| !! | CAAGAGCATCAACCCTGATG+AGG | + | chr7_3:32668461-32668480 | Msa1101720:CDS | 50.0% |
| CCATAAGCGATTGCCTCATC+AGG | - | chr7_3:32668477-32668496 | None:intergenic | 50.0% | |
| CCTGATGAGGCAATCGCTTA+TGG | + | chr7_3:32668474-32668493 | Msa1101720:CDS | 50.0% | |
| TCTTGGGTGTGGTGATTCCT+AGG | + | chr7_3:32668604-32668623 | Msa1101720:CDS | 50.0% | |
| ! | GAGGCTTACCGTATCGATGA+TGG | + | chr7_3:32668945-32668964 | Msa1101720:CDS | 50.0% |
| GGCTGAAGTCATGAATGCTC+TGG | + | chr7_3:32668983-32669002 | Msa1101720:CDS | 50.0% | |
| ! | GGCCGCAAATTTGCTTGATG+TGG | + | chr7_3:32669106-32669125 | Msa1101720:CDS | 50.0% |
| GGTGGAAACACTCACCTTGG+GGG | + | chr7_3:32668048-32668067 | Msa1101720:CDS | 55.0% | |
| AAACACTCACCTTGGGGGAG+AGG | + | chr7_3:32668053-32668072 | Msa1101720:CDS | 55.0% | |
| GGAACCCAAAAGCCCTAAGG+AGG | + | chr7_3:32668145-32668164 | Msa1101720:CDS | 55.0% | |
| GTTGAGAACTGCGTGCGAGA+AGG | + | chr7_3:32668167-32668186 | Msa1101720:CDS | 55.0% | |
| CTGCGTGCGAGAAGGCAAAA+AGG | + | chr7_3:32668175-32668194 | Msa1101720:CDS | 55.0% | |
| GCAGGACTTCTTCTACGGGA+AGG | + | chr7_3:32668431-32668450 | Msa1101720:CDS | 55.0% | |
| GATGTCGCACCACTGTCTCT+TGG | + | chr7_3:32668561-32668580 | Msa1101720:CDS | 55.0% | |
| TCGCACCACTGTCTCTTGGT+TGG | + | chr7_3:32668565-32668584 | Msa1101720:CDS | 55.0% | |
| CGCTTATGGCGCAGCTGTCC+AGG | + | chr7_3:32668488-32668507 | Msa1101720:CDS | 65.0% | |
| TTACCCCCTGCAGCTGCTCG+TGG | + | chr7_3:32668768-32668787 | Msa1101720:CDS | 65.0% | |
| ATGGCCACGAGCAGCTGCAG+GGG | - | chr7_3:32668775-32668794 | None:intergenic | 65.0% | |
| GATGGCCACGAGCAGCTGCA+GGG | - | chr7_3:32668776-32668795 | None:intergenic | 65.0% | |
| TGGCCACGAGCAGCTGCAGG+GGG | - | chr7_3:32668774-32668793 | None:intergenic | 70.0% | |
| GGATGGCCACGAGCAGCTGC+AGG | - | chr7_3:32668777-32668796 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 32666332 | 32669485 | 32666332 | ID=Msa1101720;Name=Msa1101720 |
| chr7_3 | mRNA | 32666332 | 32669485 | 32666332 | ID=Msa1101720-mRNA-1;Parent=Msa1101720;Name=Msa1101720-mRNA-1;_AED=0.09;_eAED=0.09;_QI=140|1|1|1|0.5|0.66|3|268|619 |
| chr7_3 | exon | 32666332 | 32666468 | 32666332 | ID=Msa1101720-mRNA-1:exon:7083;Parent=Msa1101720-mRNA-1 |
| chr7_3 | exon | 32667016 | 32667238 | 32667016 | ID=Msa1101720-mRNA-1:exon:7084;Parent=Msa1101720-mRNA-1 |
| chr7_3 | exon | 32667578 | 32669485 | 32667578 | ID=Msa1101720-mRNA-1:exon:7085;Parent=Msa1101720-mRNA-1 |
| chr7_3 | five_prime_UTR | 32666332 | 32666468 | 32666332 | ID=Msa1101720-mRNA-1:five_prime_utr;Parent=Msa1101720-mRNA-1 |
| chr7_3 | five_prime_UTR | 32667016 | 32667018 | 32667016 | ID=Msa1101720-mRNA-1:five_prime_utr;Parent=Msa1101720-mRNA-1 |
| chr7_3 | CDS | 32667019 | 32667238 | 32667019 | ID=Msa1101720-mRNA-1:cds;Parent=Msa1101720-mRNA-1 |
| chr7_3 | CDS | 32667578 | 32669217 | 32667578 | ID=Msa1101720-mRNA-1:cds;Parent=Msa1101720-mRNA-1 |
| chr7_3 | three_prime_UTR | 32669218 | 32669485 | 32669218 | ID=Msa1101720-mRNA-1:three_prime_utr;Parent=Msa1101720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
