Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101710 | XP_013448460.1 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101710 | sp|P09189|HSP7C_PETHY | 65.428 | 619 | 208 | 5 | 1 | 617 | 1 | 615 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101710 | A0A072TYI4 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa1101710 | 0.800102 | 1.687090e-48 | -8.615850e-47 |
| Msa0017510 | Msa1101710 | 0.818103 | 2.333622e-52 | -8.615850e-47 |
| Msa0027230 | Msa1101710 | 0.806249 | 9.017022e-50 | -8.615850e-47 |
| Msa0027820 | Msa1101710 | 0.814361 | 1.602002e-51 | -8.615850e-47 |
| Msa0030180 | Msa1101710 | 0.814582 | 1.431844e-51 | -8.615850e-47 |
| Msa0063890 | Msa1101710 | 0.832026 | 1.195088e-55 | -8.615850e-47 |
| Msa0075220 | Msa1101710 | 0.808329 | 3.268079e-50 | -8.615850e-47 |
| Msa0101440 | Msa1101710 | 0.834031 | 3.791258e-56 | -8.615850e-47 |
| Msa0110970 | Msa1101710 | 0.809367 | 1.959388e-50 | -8.615850e-47 |
| Msa0120400 | Msa1101710 | 0.808190 | 3.498476e-50 | -8.615850e-47 |
| Msa0625190 | Msa1101710 | 0.824474 | 7.914247e-54 | -8.615850e-47 |
| Msa0626450 | Msa1101710 | 0.811436 | 7.008820e-51 | -8.615850e-47 |
| Msa0626490 | Msa1101710 | 0.810488 | 1.124187e-50 | -8.615850e-47 |
| Msa0664600 | Msa1101710 | 0.812578 | 3.950107e-51 | -8.615850e-47 |
| Msa0669320 | Msa1101710 | 0.807291 | 5.430852e-50 | -8.615850e-47 |
| Msa0677410 | Msa1101710 | 0.800031 | 1.743942e-48 | -8.615850e-47 |
| Msa0733390 | Msa1101710 | 0.814799 | 1.281865e-51 | -8.615850e-47 |
| Msa0754520 | Msa1101710 | 0.812123 | 4.967662e-51 | -8.615850e-47 |
| Msa0756460 | Msa1101710 | 0.815902 | 7.287529e-52 | -8.615850e-47 |
| Msa0765270 | Msa1101710 | 0.803421 | 3.513600e-49 | -8.615850e-47 |
| Msa0785210 | Msa1101710 | 0.801292 | 9.645438e-49 | -8.615850e-47 |
| Msa0833220 | Msa1101710 | 0.814459 | 1.524602e-51 | -8.615850e-47 |
| Msa0835530 | Msa1101710 | 0.803519 | 3.353880e-49 | -8.615850e-47 |
| Msa0124060 | Msa1101710 | 0.802898 | 4.509673e-49 | -8.615850e-47 |
| Msa0157290 | Msa1101710 | 0.819000 | 1.461007e-52 | -8.615850e-47 |
| Msa0167520 | Msa1101710 | 0.802586 | 5.230708e-49 | -8.615850e-47 |
| Msa0168500 | Msa1101710 | 0.812329 | 4.477788e-51 | -8.615850e-47 |
| Msa0223690 | Msa1101710 | 0.800451 | 1.432200e-48 | -8.615850e-47 |
| Msa0224780 | Msa1101710 | 0.815573 | 8.625127e-52 | -8.615850e-47 |
| Msa0225680 | Msa1101710 | 0.811382 | 7.201273e-51 | -8.615850e-47 |
| Msa0367870 | Msa1101710 | 0.809586 | 1.758363e-50 | -8.615850e-47 |
| Msa0388960 | Msa1101710 | 0.803447 | 3.471605e-49 | -8.615850e-47 |
| Msa0392510 | Msa1101710 | 0.809923 | 1.488423e-50 | -8.615850e-47 |
| Msa0410650 | Msa1101710 | 0.819256 | 1.277776e-52 | -8.615850e-47 |
| Msa0422850 | Msa1101710 | 0.835639 | 1.492967e-56 | -8.615850e-47 |
| Msa0422930 | Msa1101710 | 0.837018 | 6.656205e-57 | -8.615850e-47 |
| Msa0464260 | Msa1101710 | 0.818123 | 2.309971e-52 | -8.615850e-47 |
| Msa1016320 | Msa1101710 | 0.800053 | 1.726359e-48 | -8.615850e-47 |
| Msa1017430 | Msa1101710 | 0.979935 | 4.501937e-149 | -8.615850e-47 |
| Msa1019000 | Msa1101710 | 0.802129 | 6.495699e-49 | -8.615850e-47 |
| Msa1019150 | Msa1101710 | 0.808281 | 3.345797e-50 | -8.615850e-47 |
| Msa1051830 | Msa1101710 | 0.800595 | 1.338532e-48 | -8.615850e-47 |
| Msa1070010 | Msa1101710 | 0.804225 | 2.392633e-49 | -8.615850e-47 |
| Msa1085200 | Msa1101710 | 0.817288 | 3.564166e-52 | -8.615850e-47 |
| Msa1089940 | Msa1101710 | 0.804690 | 1.913502e-49 | -8.615850e-47 |
| Msa1101710 | Msa1101720 | 0.979954 | 4.081696e-149 | -8.615850e-47 |
| Msa1101710 | Msa1101760 | 0.977213 | 2.476664e-143 | -8.615850e-47 |
| Msa1101710 | Msa1113340 | 0.811656 | 6.276642e-51 | -8.615850e-47 |
| Msa1101710 | Msa1121490 | 0.800617 | 1.325175e-48 | -8.615850e-47 |
| Msa1101710 | Msa1137570 | 0.803651 | 3.149402e-49 | -8.615850e-47 |
| Msa1101710 | Msa1157870 | 0.800371 | 1.487312e-48 | -8.615850e-47 |
| Msa1101710 | Msa1178180 | 0.828048 | 1.116517e-54 | -8.615850e-47 |
| Msa1101710 | Msa1199570 | 0.806092 | 9.726810e-50 | -8.615850e-47 |
| Msa1101710 | Msa1225700 | 0.803861 | 2.847871e-49 | -8.615850e-47 |
| Msa1101710 | Msa1229500 | 0.802269 | 6.078509e-49 | -8.615850e-47 |
| Msa1101710 | Msa1236100 | 0.807425 | 5.085671e-50 | -8.615850e-47 |
| Msa1101710 | Msa1309030 | 0.804000 | 2.664793e-49 | -8.615850e-47 |
| Msa1101710 | Msa1313150 | 0.800063 | 1.717713e-48 | -8.615850e-47 |
| Msa1101710 | Msa1328710 | 0.803148 | 4.002780e-49 | -8.615850e-47 |
| Msa1101710 | Msa1387870 | 0.816542 | 5.240855e-52 | -8.615850e-47 |
| Msa1101710 | Msa1414520 | 0.802224 | 6.210587e-49 | -8.615850e-47 |
| Msa1101710 | Msa1419370 | 0.827129 | 1.855026e-54 | -8.615850e-47 |
| Msa1101710 | Msa1422420 | 0.806682 | 7.305787e-50 | -8.615850e-47 |
| Msa1101710 | Msa1440960 | 0.805633 | 1.215124e-49 | -8.615850e-47 |
| Msa0255090 | Msa1101710 | 0.808189 | 3.499327e-50 | -8.615850e-47 |
| Msa0261340 | Msa1101710 | 0.806374 | 8.483613e-50 | -8.615850e-47 |
| Msa0292400 | Msa1101710 | 0.818006 | 2.454472e-52 | -8.615850e-47 |
| Msa0318700 | Msa1101710 | 0.803445 | 3.473693e-49 | -8.615850e-47 |
| Msa0574890 | Msa1101710 | 0.834013 | 3.830821e-56 | -8.615850e-47 |
| Msa0861600 | Msa1101710 | 0.807213 | 5.642619e-50 | -8.615850e-47 |
| Msa0869780 | Msa1101710 | 0.808139 | 3.586287e-50 | -8.615850e-47 |
| Msa0875290 | Msa1101710 | 0.802264 | 6.092398e-49 | -8.615850e-47 |
| Msa0876190 | Msa1101710 | 0.809182 | 2.147036e-50 | -8.615850e-47 |
| Msa0880140 | Msa1101710 | 0.815190 | 1.049357e-51 | -8.615850e-47 |
| Msa0938480 | Msa1101710 | 0.814908 | 1.212273e-51 | -8.615850e-47 |
| Msa0945110 | Msa1101710 | 0.813562 | 2.403241e-51 | -8.615850e-47 |
| Msa0967380 | Msa1101710 | 0.816262 | 6.053786e-52 | -8.615850e-47 |
| Msa0974080 | Msa1101710 | 0.804892 | 1.736425e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101710 | MtrunA17_Chr7g0233311 | 85.945 | 619 | 87 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1099 |
| Msa1101710 | MtrunA17_Chr7g0233301 | 80.744 | 618 | 88 | 1 | 1 | 618 | 1 | 587 | 0.0 | 1012 |
| Msa1101710 | MtrunA17_Chr2g0298851 | 73.183 | 619 | 163 | 3 | 1 | 618 | 1 | 617 | 0.0 | 942 |
| Msa1101710 | MtrunA17_Chr7g0221661 | 72.358 | 615 | 168 | 2 | 1 | 615 | 1 | 613 | 0.0 | 934 |
| Msa1101710 | MtrunA17_Chr2g0293581 | 72.097 | 620 | 170 | 3 | 1 | 618 | 1 | 619 | 0.0 | 924 |
| Msa1101710 | MtrunA17_Chr4g0040931 | 72.549 | 612 | 167 | 1 | 1 | 612 | 1 | 611 | 0.0 | 917 |
| Msa1101710 | MtrunA17_Chr2g0298861 | 70.365 | 631 | 172 | 4 | 1 | 618 | 1 | 629 | 0.0 | 915 |
| Msa1101710 | MtrunA17_Chr5g0427901 | 71.338 | 628 | 167 | 3 | 1 | 617 | 1 | 626 | 0.0 | 914 |
| Msa1101710 | MtrunA17_Chr7g0223721 | 70.874 | 618 | 179 | 1 | 1 | 618 | 1 | 617 | 0.0 | 907 |
| Msa1101710 | MtrunA17_Chr7g0223851 | 70.598 | 619 | 179 | 2 | 1 | 618 | 10 | 626 | 0.0 | 901 |
| Msa1101710 | MtrunA17_Chr7g0225671 | 71.195 | 611 | 172 | 3 | 9 | 618 | 16 | 623 | 0.0 | 894 |
| Msa1101710 | MtrunA17_Chr7g0223801 | 69.854 | 617 | 182 | 3 | 1 | 617 | 1 | 613 | 0.0 | 893 |
| Msa1101710 | MtrunA17_Chr7g0217971 | 70.388 | 618 | 156 | 3 | 1 | 618 | 1 | 591 | 0.0 | 881 |
| Msa1101710 | MtrunA17_Chr2g0287631 | 70.227 | 618 | 184 | 0 | 1 | 618 | 1 | 618 | 0.0 | 880 |
| Msa1101710 | MtrunA17_Chr7g0223821 | 69.021 | 623 | 179 | 5 | 1 | 615 | 1 | 617 | 0.0 | 851 |
| Msa1101710 | MtrunA17_Chr7g0223821 | 45.238 | 84 | 44 | 1 | 534 | 615 | 620 | 703 | 8.79e-13 | 71.6 |
| Msa1101710 | MtrunA17_Chr4g0012541 | 66.397 | 619 | 196 | 3 | 1 | 618 | 1 | 608 | 0.0 | 839 |
| Msa1101710 | MtrunA17_Chr7g0223181 | 66.236 | 619 | 203 | 5 | 1 | 617 | 1 | 615 | 0.0 | 827 |
| Msa1101710 | MtrunA17_Chr7g0223831 | 66.883 | 616 | 173 | 4 | 1 | 615 | 1 | 586 | 0.0 | 824 |
| Msa1101710 | MtrunA17_Chr2g0296391 | 74.432 | 528 | 135 | 0 | 1 | 528 | 1 | 528 | 0.0 | 822 |
| Msa1101710 | MtrunA17_Chr4g0031321 | 64.782 | 619 | 212 | 5 | 1 | 617 | 1 | 615 | 0.0 | 815 |
| Msa1101710 | MtrunA17_Chr7g0223711 | 63.695 | 617 | 222 | 2 | 1 | 617 | 1 | 615 | 0.0 | 815 |
| Msa1101710 | MtrunA17_Chr4g0031301 | 64.943 | 619 | 211 | 5 | 1 | 617 | 1 | 615 | 0.0 | 814 |
| Msa1101710 | MtrunA17_Chr8g0390821 | 62.687 | 670 | 180 | 8 | 1 | 617 | 1 | 653 | 0.0 | 814 |
| Msa1101710 | MtrunA17_Chr7g0223291 | 64.620 | 619 | 213 | 5 | 1 | 617 | 1 | 615 | 0.0 | 811 |
| Msa1101710 | MtrunA17_Chr8g0350731 | 64.019 | 617 | 219 | 2 | 1 | 617 | 29 | 642 | 0.0 | 811 |
| Msa1101710 | MtrunA17_Chr7g0223751 | 63.857 | 617 | 220 | 2 | 1 | 617 | 1 | 614 | 0.0 | 809 |
| Msa1101710 | MtrunA17_Chr7g0262821 | 64.459 | 619 | 214 | 5 | 1 | 617 | 1 | 615 | 0.0 | 808 |
| Msa1101710 | MtrunA17_Chr7g0215261 | 65.478 | 617 | 175 | 5 | 1 | 615 | 1 | 581 | 0.0 | 808 |
| Msa1101710 | MtrunA17_Chr7g0228281 | 65.751 | 619 | 164 | 5 | 1 | 618 | 62 | 633 | 0.0 | 807 |
| Msa1101710 | MtrunA17_Chr7g0223031 | 63.889 | 612 | 218 | 2 | 1 | 612 | 1 | 609 | 0.0 | 804 |
| Msa1101710 | MtrunA17_Chr7g0223621 | 63.312 | 616 | 223 | 2 | 1 | 616 | 1 | 613 | 0.0 | 803 |
| Msa1101710 | MtrunA17_Chr7g0223731 | 61.750 | 617 | 233 | 2 | 1 | 617 | 1 | 614 | 0.0 | 788 |
| Msa1101710 | MtrunA17_Chr7g0223781 | 63.577 | 615 | 220 | 3 | 1 | 615 | 1 | 611 | 0.0 | 786 |
| Msa1101710 | MtrunA17_Chr7g0223741 | 63.727 | 601 | 215 | 2 | 1 | 601 | 1 | 598 | 0.0 | 785 |
| Msa1101710 | MtrunA17_Chr4g0073741 | 62.359 | 619 | 226 | 6 | 1 | 617 | 1 | 614 | 0.0 | 779 |
| Msa1101710 | MtrunA17_Chr7g0248151 | 63.005 | 619 | 225 | 3 | 1 | 617 | 1 | 617 | 0.0 | 771 |
| Msa1101710 | MtrunA17_Chr7g0223701 | 61.290 | 620 | 230 | 5 | 1 | 612 | 1 | 618 | 0.0 | 769 |
| Msa1101710 | MtrunA17_Chr7g0248131 | 61.675 | 621 | 232 | 5 | 1 | 617 | 1 | 619 | 0.0 | 768 |
| Msa1101710 | MtrunA17_Chr7g0223631 | 61.912 | 617 | 218 | 4 | 1 | 617 | 1 | 600 | 0.0 | 760 |
| Msa1101710 | MtrunA17_Chr2g0293601 | 68.015 | 519 | 132 | 1 | 1 | 519 | 1 | 485 | 0.0 | 721 |
| Msa1101710 | MtrunA17_Chr2g0331381 | 64.007 | 539 | 131 | 3 | 10 | 548 | 7 | 482 | 0.0 | 695 |
| Msa1101710 | MtrunA17_Chr6g0462681 | 56.149 | 618 | 266 | 4 | 1 | 617 | 1 | 614 | 0.0 | 687 |
| Msa1101710 | MtrunA17_Chr7g0223541 | 61.651 | 545 | 205 | 4 | 74 | 617 | 31 | 572 | 0.0 | 687 |
| Msa1101710 | MtrunA17_Chr7g0223681 | 63.188 | 527 | 191 | 2 | 91 | 617 | 2 | 525 | 0.0 | 681 |
| Msa1101710 | MtrunA17_Chr6g0462601 | 56.796 | 618 | 262 | 4 | 1 | 617 | 1 | 614 | 0.0 | 675 |
| Msa1101710 | MtrunA17_Chr1g0166551 | 57.447 | 611 | 146 | 5 | 9 | 618 | 5 | 502 | 0.0 | 672 |
| Msa1101710 | MtrunA17_Chr6g0462711 | 54.797 | 615 | 269 | 5 | 9 | 617 | 10 | 621 | 0.0 | 645 |
| Msa1101710 | MtrunA17_Chr2g0284681 | 57.932 | 561 | 227 | 4 | 9 | 562 | 8 | 566 | 0.0 | 642 |
| Msa1101710 | MtrunA17_Chr2g0293561 | 78.780 | 377 | 80 | 0 | 1 | 377 | 1 | 377 | 0.0 | 639 |
| Msa1101710 | MtrunA17_Chr6g0462641 | 52.970 | 623 | 283 | 5 | 1 | 617 | 1 | 619 | 0.0 | 633 |
| Msa1101710 | MtrunA17_Chr8g0388761 | 54.344 | 587 | 257 | 8 | 7 | 589 | 36 | 615 | 0.0 | 624 |
| Msa1101710 | MtrunA17_Chr8g0388671 | 54.514 | 587 | 256 | 8 | 7 | 589 | 36 | 615 | 0.0 | 624 |
| Msa1101710 | MtrunA17_Chr6g0462771 | 53.659 | 615 | 275 | 5 | 9 | 617 | 9 | 619 | 0.0 | 623 |
| Msa1101710 | MtrunA17_Chr6g0462611 | 53.493 | 544 | 250 | 3 | 74 | 617 | 22 | 562 | 0.0 | 573 |
| Msa1101710 | MtrunA17_Chr2g0299821 | 64.467 | 394 | 136 | 2 | 1 | 392 | 1 | 392 | 0.0 | 526 |
| Msa1101710 | MtrunA17_Chr2g0299821 | 51.087 | 92 | 36 | 3 | 453 | 536 | 390 | 480 | 4.62e-17 | 84.3 |
| Msa1101710 | MtrunA17_Chr2g0293271 | 60.412 | 437 | 103 | 3 | 21 | 457 | 43 | 409 | 0.0 | 521 |
| Msa1101710 | MtrunA17_Chr2g0299921 | 68.274 | 394 | 121 | 2 | 3 | 396 | 1023 | 1412 | 1.37e-180 | 557 |
| Msa1101710 | MtrunA17_Chr2g0299921 | 66.751 | 394 | 126 | 3 | 3 | 395 | 1407 | 1796 | 2.10e-167 | 521 |
| Msa1101710 | MtrunA17_Chr2g0299851 | 67.179 | 390 | 124 | 2 | 1 | 390 | 1030 | 1415 | 8.03e-179 | 544 |
| Msa1101710 | MtrunA17_Chr2g0299791 | 66.581 | 389 | 126 | 2 | 1 | 389 | 1034 | 1418 | 6.30e-176 | 536 |
| Msa1101710 | MtrunA17_Chr1g0151991 | 78.351 | 291 | 63 | 0 | 1 | 291 | 1 | 291 | 7.61e-168 | 479 |
| Msa1101710 | MtrunA17_Chr2g0299881 | 65.974 | 385 | 123 | 3 | 9 | 389 | 1038 | 1418 | 2.00e-166 | 513 |
| Msa1101710 | MtrunA17_Chr2g0299881 | 56.164 | 73 | 30 | 1 | 180 | 250 | 1403 | 1475 | 2.53e-17 | 86.7 |
| Msa1101710 | MtrunA17_Chr2g0279901 | 46.299 | 581 | 282 | 13 | 10 | 582 | 57 | 615 | 2.49e-163 | 483 |
| Msa1101710 | MtrunA17_Chr6g0462861 | 43.891 | 622 | 317 | 10 | 6 | 617 | 6 | 605 | 1.96e-160 | 474 |
| Msa1101710 | MtrunA17_Chr7g0245521 | 78.388 | 273 | 59 | 0 | 1 | 273 | 1 | 273 | 2.20e-157 | 452 |
| Msa1101710 | MtrunA17_Chr4g0049501 | 44.940 | 583 | 288 | 14 | 10 | 582 | 54 | 613 | 4.58e-156 | 464 |
| Msa1101710 | MtrunA17_Chr7g0245531 | 69.329 | 313 | 94 | 2 | 305 | 617 | 2 | 312 | 2.64e-151 | 438 |
| Msa1101710 | MtrunA17_Chr2g0277021 | 45.081 | 559 | 285 | 11 | 10 | 562 | 72 | 614 | 1.56e-150 | 451 |
| Msa1101710 | MtrunA17_Chr7g0223761 | 58.047 | 379 | 115 | 3 | 241 | 618 | 3 | 338 | 4.56e-145 | 424 |
| Msa1101710 | MtrunA17_Chr1g0152001 | 63.333 | 300 | 107 | 2 | 315 | 614 | 1 | 297 | 3.34e-130 | 385 |
| Msa1101710 | MtrunA17_Chr1g0188611 | 63.300 | 297 | 101 | 2 | 322 | 618 | 1 | 289 | 3.90e-115 | 345 |
| Msa1101710 | MtrunA17_Chr1g0188601 | 82.199 | 191 | 34 | 0 | 92 | 282 | 1 | 191 | 2.46e-109 | 327 |
| Msa1101710 | MtrunA17_Chr6g0462631 | 52.077 | 313 | 107 | 3 | 100 | 411 | 22 | 292 | 3.85e-98 | 301 |
| Msa1101710 | MtrunA17_Chr7g0223671 | 72.340 | 188 | 52 | 0 | 74 | 261 | 8 | 195 | 1.05e-97 | 297 |
| Msa1101710 | MtrunA17_Chr6g0462751 | 48.555 | 346 | 118 | 4 | 67 | 409 | 12 | 300 | 4.01e-97 | 300 |
| Msa1101710 | MtrunA17_Chr7g0223771 | 78.431 | 153 | 33 | 0 | 93 | 245 | 1 | 153 | 7.26e-84 | 259 |
| Msa1101710 | MtrunA17_Chr5g0394391 | 35.516 | 504 | 297 | 14 | 9 | 495 | 29 | 521 | 9.04e-82 | 268 |
| Msa1101710 | MtrunA17_Chr7g0245541 | 62.687 | 201 | 73 | 2 | 417 | 617 | 1 | 199 | 2.55e-78 | 246 |
| Msa1101710 | MtrunA17_Chr7g0223861 | 82.443 | 131 | 23 | 0 | 78 | 208 | 4 | 134 | 1.08e-73 | 232 |
| Msa1101710 | MtrunA17_Chr4g0004331 | 33.827 | 405 | 261 | 6 | 10 | 411 | 4 | 404 | 1.50e-73 | 252 |
| Msa1101710 | MtrunA17_Chr4g0046881 | 78.723 | 141 | 27 | 1 | 135 | 275 | 14 | 151 | 2.30e-73 | 232 |
| Msa1101710 | MtrunA17_Chr3g0098761 | 29.878 | 492 | 331 | 8 | 10 | 497 | 4 | 485 | 4.07e-70 | 241 |
| Msa1101710 | MtrunA17_Chr2g0331901 | 32.110 | 436 | 277 | 8 | 10 | 431 | 4 | 434 | 5.26e-70 | 243 |
| Msa1101710 | MtrunA17_Chr6g0462791 | 61.932 | 176 | 66 | 1 | 108 | 283 | 1 | 175 | 1.96e-69 | 223 |
| Msa1101710 | MtrunA17_Chr5g0444001 | 32.401 | 429 | 278 | 6 | 10 | 431 | 4 | 427 | 1.02e-68 | 233 |
| Msa1101710 | MtrunA17_Chr4g0064621 | 33.529 | 510 | 303 | 17 | 9 | 492 | 140 | 639 | 4.34e-58 | 207 |
| Msa1101710 | MtrunA17_Chr5g0394221 | 38.176 | 296 | 164 | 6 | 299 | 588 | 69 | 351 | 1.44e-54 | 189 |
| Msa1101710 | MtrunA17_Chr3g0120101 | 27.186 | 526 | 345 | 11 | 7 | 499 | 24 | 544 | 5.42e-54 | 198 |
| Msa1101710 | MtrunA17_Chr6g0481391 | 70.492 | 122 | 33 | 1 | 38 | 159 | 13 | 131 | 2.56e-52 | 176 |
| Msa1101710 | MtrunA17_Chr6g0462701 | 53.801 | 171 | 55 | 1 | 100 | 270 | 22 | 168 | 7.36e-52 | 176 |
| Msa1101710 | MtrunA17_Chr4g0060241 | 27.811 | 507 | 328 | 14 | 10 | 498 | 21 | 507 | 8.22e-47 | 173 |
| Msa1101710 | MtrunA17_Chr5g0442171 | 33.934 | 333 | 192 | 12 | 170 | 488 | 1 | 319 | 1.85e-44 | 161 |
| Msa1101710 | MtrunA17_Chr4g0046871 | 75.758 | 99 | 24 | 0 | 339 | 437 | 9 | 107 | 2.76e-44 | 153 |
| Msa1101710 | MtrunA17_Chr6g0462691 | 52.817 | 142 | 66 | 1 | 322 | 462 | 1 | 142 | 9.59e-43 | 151 |
| Msa1101710 | MtrunA17_Chr5g0394231 | 36.404 | 228 | 92 | 5 | 74 | 299 | 5 | 181 | 3.49e-37 | 136 |
| Msa1101710 | MtrunA17_Chr1g0188591 | 80.822 | 73 | 14 | 0 | 1 | 73 | 1 | 73 | 1.63e-35 | 128 |
| Msa1101710 | MtrunA17_Chr7g0223691 | 75.342 | 73 | 18 | 0 | 1 | 73 | 1 | 73 | 1.52e-32 | 119 |
| Msa1101710 | MtrunA17_Chr7g0223871 | 48.819 | 127 | 65 | 0 | 492 | 618 | 7 | 133 | 5.28e-32 | 120 |
| Msa1101710 | MtrunA17_Chr6g0481381 | 71.622 | 74 | 21 | 0 | 176 | 249 | 1 | 74 | 5.65e-32 | 122 |
| Msa1101710 | MtrunA17_Chr6g0481381 | 56.842 | 95 | 41 | 0 | 516 | 610 | 75 | 169 | 1.48e-29 | 115 |
| Msa1101710 | MtrunA17_Chr7g0223791 | 47.727 | 132 | 59 | 2 | 441 | 572 | 58 | 179 | 1.78e-30 | 117 |
| Msa1101710 | MtrunA17_Chr7g0223791 | 67.901 | 81 | 18 | 3 | 56 | 136 | 18 | 90 | 8.35e-27 | 107 |
| Msa1101710 | MtrunA17_Chr7g0223881 | 65.854 | 82 | 27 | 1 | 281 | 362 | 2 | 82 | 4.99e-29 | 110 |
| Msa1101710 | MtrunA17_Chr6g0462621 | 67.123 | 73 | 22 | 1 | 1 | 73 | 1 | 71 | 9.54e-27 | 103 |
| Msa1101710 | MtrunA17_Chr7g0223661 | 42.241 | 116 | 24 | 1 | 315 | 430 | 1 | 73 | 8.41e-20 | 84.3 |
| Msa1101710 | MtrunA17_Chr7g0221651 | 46.429 | 84 | 45 | 0 | 215 | 298 | 1 | 84 | 2.30e-19 | 83.2 |
| Msa1101710 | MtrunA17_Chr6g0462801 | 59.091 | 66 | 22 | 1 | 322 | 382 | 1 | 66 | 8.59e-17 | 75.5 |
| Msa1101710 | MtrunA17_Chr2g0299891 | 76.744 | 43 | 10 | 0 | 315 | 357 | 1 | 43 | 1.63e-16 | 74.3 |
| Msa1101710 | MtrunA17_Chr5g0442161 | 32.680 | 153 | 96 | 4 | 9 | 157 | 28 | 177 | 1.87e-16 | 77.8 |
| Msa1101710 | MtrunA17_Chr4g0064651 | 40.860 | 93 | 53 | 2 | 397 | 488 | 29 | 120 | 2.96e-16 | 75.5 |
| Msa1101710 | MtrunA17_Chr2g0284661 | 50.602 | 83 | 40 | 1 | 368 | 449 | 61 | 143 | 1.30e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101710 | AT3G12580.1 | 64.297 | 619 | 215 | 5 | 1 | 617 | 1 | 615 | 0.0 | 809 |
| Msa1101710 | AT5G02500.1 | 63.651 | 619 | 219 | 5 | 1 | 617 | 1 | 615 | 0.0 | 804 |
| Msa1101710 | AT3G09440.1 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101710 | AT3G09440.4 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101710 | AT3G09440.2 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101710 | AT3G09440.3 | 63.489 | 619 | 220 | 5 | 1 | 617 | 1 | 615 | 0.0 | 797 |
| Msa1101710 | AT5G02490.1 | 63.328 | 619 | 221 | 5 | 1 | 617 | 1 | 615 | 0.0 | 796 |
| Msa1101710 | AT1G56410.1 | 63.813 | 619 | 216 | 6 | 1 | 617 | 1 | 613 | 0.0 | 792 |
| Msa1101710 | AT1G16030.1 | 61.551 | 619 | 231 | 6 | 1 | 617 | 1 | 614 | 0.0 | 771 |
| Msa1101710 | AT5G28540.1 | 54.160 | 613 | 269 | 9 | 7 | 615 | 35 | 639 | 0.0 | 635 |
| Msa1101710 | AT5G42020.1 | 53.997 | 613 | 270 | 9 | 7 | 615 | 35 | 639 | 0.0 | 634 |
| Msa1101710 | AT5G42020.3 | 53.997 | 613 | 270 | 9 | 7 | 615 | 40 | 644 | 0.0 | 633 |
| Msa1101710 | AT1G09080.1 | 53.958 | 619 | 264 | 9 | 7 | 613 | 50 | 659 | 0.0 | 625 |
| Msa1101710 | AT1G09080.2 | 53.958 | 619 | 264 | 9 | 7 | 613 | 40 | 649 | 0.0 | 625 |
| Msa1101710 | AT5G02500.2 | 73.265 | 389 | 102 | 1 | 1 | 389 | 1 | 387 | 0.0 | 607 |
| Msa1101710 | AT5G42020.2 | 49.592 | 613 | 242 | 11 | 7 | 615 | 35 | 584 | 0.0 | 555 |
| Msa1101710 | AT5G09590.1 | 44.026 | 611 | 302 | 15 | 10 | 612 | 60 | 638 | 4.81e-153 | 457 |
| Msa1101710 | AT4G37910.1 | 46.127 | 581 | 284 | 13 | 10 | 582 | 55 | 614 | 5.57e-152 | 454 |
| Msa1101710 | AT4G37910.2 | 46.127 | 581 | 284 | 13 | 10 | 582 | 55 | 614 | 5.57e-152 | 454 |
| Msa1101710 | AT4G24280.1 | 44.118 | 578 | 299 | 12 | 10 | 581 | 81 | 640 | 3.39e-150 | 451 |
| Msa1101710 | AT5G49910.1 | 45.081 | 559 | 285 | 11 | 10 | 562 | 81 | 623 | 3.16e-148 | 446 |
| Msa1101710 | AT2G32120.1 | 34.195 | 503 | 298 | 13 | 9 | 497 | 30 | 513 | 2.35e-74 | 248 |
| Msa1101710 | AT2G32120.2 | 34.195 | 503 | 298 | 13 | 9 | 497 | 30 | 513 | 2.35e-74 | 248 |
| Msa1101710 | AT1G79930.2 | 32.075 | 477 | 300 | 9 | 10 | 469 | 4 | 473 | 2.40e-73 | 251 |
| Msa1101710 | AT1G79920.3 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101710 | AT1G79920.2 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101710 | AT1G79920.4 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 3.59e-73 | 249 |
| Msa1101710 | AT1G79920.1 | 32.495 | 477 | 298 | 9 | 10 | 469 | 4 | 473 | 4.14e-73 | 249 |
| Msa1101710 | AT1G79930.1 | 32.075 | 477 | 300 | 9 | 10 | 469 | 4 | 473 | 5.95e-73 | 251 |
| Msa1101710 | AT1G11660.4 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101710 | AT1G11660.3 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101710 | AT1G11660.1 | 33.663 | 404 | 260 | 7 | 10 | 410 | 4 | 402 | 6.34e-70 | 241 |
| Msa1101710 | AT1G11660.2 | 34.239 | 368 | 236 | 5 | 46 | 410 | 1 | 365 | 1.87e-63 | 223 |
| Msa1101710 | AT4G16660.2 | 25.714 | 525 | 355 | 10 | 6 | 499 | 47 | 567 | 2.21e-55 | 202 |
| Msa1101710 | AT4G16660.1 | 25.714 | 525 | 355 | 10 | 6 | 499 | 23 | 543 | 3.10e-55 | 202 |
Find 139 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTCTTTCACTCTTTC+TGG | -0.002130 | 7_3:-32630782 | Msa1101710:CDS |
| TACTGTATTCTGCTTCTTTA+AGG | 0.110951 | 7_3:-32630169 | Msa1101710:three_prime_UTR |
| CTCAACCTCCTTAGGGCTTT+TGG | 0.111076 | 7_3:+32631376 | None:intergenic |
| TGAGGTCGATGCTTTGTTTC+AGG | 0.236745 | 7_3:-32631299 | Msa1101710:CDS |
| CAAAATCTTTAAAACGAAAA+TGG | 0.243676 | 7_3:+32633092 | None:intergenic |
| TCCTTGTTGGTGGATCTTCT+AGG | 0.269778 | 7_3:-32631141 | Msa1101710:CDS |
| TGCAATAGTTGCTGCACTTT+AGG | 0.278166 | 7_3:+32631115 | None:intergenic |
| GCAAGTGACAATCATCTTCT+TGG | 0.280969 | 7_3:-32630800 | Msa1101710:CDS |
| ACAGATGCCAAGAGGCTAAT+TGG | 0.308993 | 7_3:-32631952 | Msa1101710:intron |
| ACGCAGTTCTCAACCTCCTT+AGG | 0.321307 | 7_3:+32631368 | None:intergenic |
| AGTATGTATGAGCGCATTAT+AGG | 0.322524 | 7_3:-32630344 | Msa1101710:CDS |
| ACATCGATCAACACCAAGTT+TGG | 0.331418 | 7_3:+32630983 | None:intergenic |
| CGCTTATGGCGCAGCTGTCC+AGG | 0.334122 | 7_3:-32631038 | Msa1101710:CDS |
| GGAGATTGCAGAGGCATATC+TGG | 0.336106 | 7_3:-32631767 | Msa1101710:CDS |
| CCTGATGAGGCAATCGCTTA+TGG | 0.336355 | 7_3:-32631052 | Msa1101710:CDS |
| TGTGTCTCTTCTTACAATTA+AGG | 0.339763 | 7_3:-32631527 | Msa1101710:CDS |
| AACCCAGAAAACACTGTCTT+TGG | 0.348697 | 7_3:-32632309 | Msa1101710:intron |
| ATAGATGCTGGTGTCATTGC+TGG | 0.352626 | 7_3:-32631676 | Msa1101710:CDS |
| AAATGAAAGTGATGTTCTTC+AGG | 0.352646 | 7_3:-32630387 | Msa1101710:CDS |
| GTTGATGATGTTGTCCTTGT+TGG | 0.355323 | 7_3:-32631154 | Msa1101710:CDS |
| CCATAAGCGATTGCCTCATC+AGG | 0.366584 | 7_3:+32631052 | None:intergenic |
| AAAGATGAAGGATGTGCTAT+TGG | 0.373706 | 7_3:-32632498 | Msa1101710:CDS |
| TAAAGTGCAGCAACTATTGC+AGG | 0.380400 | 7_3:-32631113 | Msa1101710:CDS |
| TGCTGAGGAAATCTCGTCTA+TGG | 0.383573 | 7_3:-32631806 | Msa1101710:CDS |
| TATTGATTTGTCTTCTTGAC+AGG | 0.384471 | 7_3:+32630887 | None:intergenic |
| AGCAATGACACCAGCATCTA+TGG | 0.384494 | 7_3:+32631678 | None:intergenic |
| ATGAAAAGTGAGATTGAGTT+TGG | 0.390787 | 7_3:+32633150 | None:intergenic |
| CGCAGTTCTCAACCTCCTTA+GGG | 0.394218 | 7_3:+32631369 | None:intergenic |
| CTGCGTGCGAGAAGGCAAAA+AGG | 0.396025 | 7_3:-32631351 | Msa1101710:CDS |
| TATGGTTAATACTTGAGGTT+TGG | 0.396886 | 7_3:-32630141 | Msa1101710:three_prime_UTR |
| CTCCTGTCCCTTGTACTTGA+GGG | 0.399012 | 7_3:+32631840 | None:intergenic |
| CTGGTGGAAACACTCACCTT+GGG | 0.401415 | 7_3:-32631480 | Msa1101710:CDS |
| AATGGTTCAAAATGAGATCT+TGG | 0.402519 | 7_3:+32633110 | None:intergenic |
| TCTTCTTACAATTAAGGATA+AGG | 0.404002 | 7_3:-32631521 | Msa1101710:CDS |
| GCTCAAGAGGAACGGTTGAT+TGG | 0.410428 | 7_3:-32632360 | Msa1101710:CDS |
| CGACAACCTTCCTATGTCAT+TGG | 0.412744 | 7_3:+32630637 | None:intergenic |
| TCTCCATGCACTCATTAAAA+AGG | 0.412944 | 7_3:+32631221 | None:intergenic |
| GAATGATTAGTTAATATTTG+TGG | 0.422386 | 7_3:-32630231 | Msa1101710:three_prime_UTR |
| GGATAAGGTCTTCGAAGTTA+AGG | 0.423231 | 7_3:-32631506 | Msa1101710:CDS |
| GGATGGCCACGAGCAGCTGC+AGG | 0.428028 | 7_3:+32630752 | None:intergenic |
| TGGCCATTCAAAGTCATTGC+GGG | 0.429564 | 7_3:-32631886 | Msa1101710:CDS |
| TGCTTTGATGTCGATCAAAA+TGG | 0.429626 | 7_3:-32630719 | Msa1101710:CDS |
| TGTCAATTAAGACACTTGTT+TGG | 0.436784 | 7_3:+32630846 | None:intergenic |
| AATCTCTCGTGCAAAGTTTG+AGG | 0.447581 | 7_3:-32631257 | Msa1101710:CDS |
| GAGGCTTACCGTATCGATGA+TGG | 0.448991 | 7_3:-32630581 | Msa1101710:CDS |
| CACCTCGAATGTTCCAAACT+TGG | 0.450052 | 7_3:-32630996 | Msa1101710:CDS |
| CTTCCTACCAATTAGCCTCT+TGG | 0.451481 | 7_3:+32631945 | None:intergenic |
| AGATGATTGTCACTTGCTCT+TGG | 0.452190 | 7_3:+32630806 | None:intergenic |
| CTATTGCAGGACTTCTTCTA+CGG | 0.461154 | 7_3:-32631100 | Msa1101710:CDS |
| GAGGTCGATGCTTTGTTTCA+GGG | 0.461220 | 7_3:-32631298 | Msa1101710:CDS |
| ACGCCCGCAATGACTTTGAA+TGG | 0.462078 | 7_3:+32631883 | None:intergenic |
| CTTTGTTGCTTTCGCTCAAG+AGG | 0.462984 | 7_3:-32632373 | Msa1101710:CDS |
| TATGAGATAAGGCGTCTTGT+TGG | 0.464947 | 7_3:+32633179 | None:intergenic |
| GATGATGTTGTCCTTGTTGG+TGG | 0.468097 | 7_3:-32631151 | Msa1101710:CDS |
| GAGATTATTCACAATGATCA+AGG | 0.469218 | 7_3:-32632414 | Msa1101710:CDS |
| TTTGTCTTTGACCTTGGTGG+TGG | 0.469354 | 7_3:-32631559 | Msa1101710:CDS |
| ATCAAGCAAATTTGCGGCCA+CGG | 0.470005 | 7_3:+32630424 | None:intergenic |
| ACATCAAAGCATACATCAAA+AGG | 0.475211 | 7_3:+32630731 | None:intergenic |
| GAAGTTAATACATGATGTCT+TGG | 0.476092 | 7_3:-32630939 | Msa1101710:CDS |
| TGAGAATCGTTGAAATAAGC+AGG | 0.477964 | 7_3:+32631712 | None:intergenic |
| TCTTGGGTGTGGTGATTCCT+AGG | 0.481383 | 7_3:-32630922 | Msa1101710:CDS |
| TTCAGAAGAAAACAAGAAGA+TGG | 0.482093 | 7_3:-32630459 | Msa1101710:CDS |
| TCTCCTGTCCCTTGTACTTG+AGG | 0.482957 | 7_3:+32631839 | None:intergenic |
| ACTGCTGCAGCTATTGCATA+TGG | 0.483888 | 7_3:-32631622 | Msa1101710:CDS |
| ATCCACATCAAGCAAATTTG+CGG | 0.484545 | 7_3:+32630418 | None:intergenic |
| GGCTGAAGTCATGAATGCTC+TGG | 0.489484 | 7_3:-32630543 | Msa1101710:CDS |
| TTGTCTTTGACCTTGGTGGT+GGG | 0.491381 | 7_3:-32631558 | Msa1101710:CDS |
| AGAGGACTTTGATAATAGAA+TGG | 0.500038 | 7_3:-32631455 | Msa1101710:CDS |
| GATGTCGCACCACTGTCTCT+TGG | 0.500080 | 7_3:-32630965 | Msa1101710:CDS |
| ACAGGAATTGAAGTGTTCCT+AGG | 0.500444 | 7_3:+32630905 | None:intergenic |
| AAAGTTTGAGGAGATCAATA+TGG | 0.505480 | 7_3:-32631245 | Msa1101710:CDS |
| GTCTTCGAAGTTAAGGCCAC+TGG | 0.522470 | 7_3:-32631499 | Msa1101710:CDS |
| CATTATAGGCAAGTCCTGCT+AGG | 0.523311 | 7_3:-32630330 | Msa1101710:exon |
| TGTCTTAATTGACATCTATG+AGG | 0.526959 | 7_3:-32630837 | Msa1101710:CDS |
| AAGCTCGTTCTTACTATCAG+TGG | 0.530723 | 7_3:+32630667 | None:intergenic |
| GAGAAATGTGTTGAAGAAGA+AGG | 0.531211 | 7_3:-32630501 | Msa1101710:CDS |
| CACCAAGTTTGGAACATTCG+AGG | 0.533491 | 7_3:+32630994 | None:intergenic |
| TTTGGTGTTGGTATGAGATA+AGG | 0.533782 | 7_3:+32633168 | None:intergenic |
| TTCCCTCAAGTACAAGGGAC+AGG | 0.533865 | 7_3:-32631842 | Msa1101710:CDS |
| GATGATTTCCCTCAAGTACA+AGG | 0.534895 | 7_3:-32631848 | Msa1101710:CDS |
| TCGCACCACTGTCTCTTGGT+TGG | 0.536532 | 7_3:-32630961 | Msa1101710:CDS |
| ACTGGTGGAAACACTCACCT+TGG | 0.538678 | 7_3:-32631481 | Msa1101710:CDS |
| GGCCGCAAATTTGCTTGATG+TGG | 0.539872 | 7_3:-32630420 | Msa1101710:CDS |
| TGATGGGAAATTCTTGAGAA+AGG | 0.545073 | 7_3:-32630564 | Msa1101710:CDS |
| AAGGTGAGTGTTTCCACCAG+TGG | 0.547001 | 7_3:+32631483 | None:intergenic |
| AGTGAGATTGAGTTTGGTGT+TGG | 0.548069 | 7_3:+32633156 | None:intergenic |
| AGAAAAGCCACCATAGATGC+TGG | 0.548590 | 7_3:-32631688 | Msa1101710:CDS |
| TGCTGTTGTCACCAATGTTG+AGG | 0.549124 | 7_3:-32631317 | Msa1101710:CDS |
| TATTAACTAATCATTCATAG+AGG | 0.552247 | 7_3:+32630238 | None:intergenic |
| AGAGGCATATCTGGAATCAC+TGG | 0.554460 | 7_3:-32631758 | Msa1101710:CDS |
| TATGCAATAGCTGCAGCAGT+TGG | 0.558562 | 7_3:+32631625 | None:intergenic |
| TTGCTTTCGCTCAAGAGGAA+CGG | 0.559950 | 7_3:-32632368 | Msa1101710:CDS |
| AAGTTAATACATGATGTCTT+GGG | 0.562861 | 7_3:-32630938 | Msa1101710:CDS |
| AGAATTTCCCATCATCGATA+CGG | 0.568365 | 7_3:+32630573 | None:intergenic |
| TGAGCGAAAGCAACAAAGGA+AGG | 0.574959 | 7_3:+32632378 | None:intergenic |
| GATGGCCACGAGCAGCTGCA+GGG | 0.575202 | 7_3:+32630753 | None:intergenic |
| AGGCTTACCGTATCGATGAT+GGG | 0.575473 | 7_3:-32630580 | Msa1101710:CDS |
| TTCGAAGTTAAGGCCACTGG+TGG | 0.576585 | 7_3:-32631496 | Msa1101710:CDS |
| TATGGTACTCACAAAGATGC+GGG | 0.579590 | 7_3:-32631788 | Msa1101710:CDS |
| CAAAGCATCGACCTCAACAT+TGG | 0.580273 | 7_3:+32631306 | None:intergenic |
| CTCTTGAGCGAAAGCAACAA+AGG | 0.582705 | 7_3:+32632374 | None:intergenic |
| ATGGCCACGAGCAGCTGCAG+GGG | 0.583174 | 7_3:+32630754 | None:intergenic |
| ATCATCGATACGGTAAGCCT+CGG | 0.588087 | 7_3:+32630583 | None:intergenic |
| GTTGAGAACTGCGTGCGAGA+AGG | 0.591918 | 7_3:-32631359 | Msa1101710:CDS |
| TTGGGAACCCAAAAGCCCTA+AGG | 0.593146 | 7_3:-32631384 | Msa1101710:CDS |
| CTTACAATAACCAATGACAT+AGG | 0.595828 | 7_3:-32630647 | Msa1101710:CDS |
| TGTGCTATTGGAATAGACCT+TGG | 0.601062 | 7_3:-32632486 | Msa1101710:CDS |
| TGGTGGAAACACTCACCTTG+GGG | 0.601557 | 7_3:-32631479 | Msa1101710:CDS |
| GTCTTAATTGACATCTATGA+GGG | 0.602609 | 7_3:-32630836 | Msa1101710:CDS |
| TATTGCAGGACTTCTTCTAC+GGG | 0.603960 | 7_3:-32631099 | Msa1101710:CDS |
| CAATAACCAATGACATAGGA+AGG | 0.605155 | 7_3:-32630643 | Msa1101710:CDS |
| ATGCCAAGAGGCTAATTGGT+AGG | 0.605854 | 7_3:-32631948 | Msa1101710:CDS |
| GCAGGACTTCTTCTACGGGA+AGG | 0.609093 | 7_3:-32631095 | Msa1101710:CDS |
| GTGGCCATTCAAAGTCATTG+CGG | 0.612672 | 7_3:-32631887 | Msa1101710:CDS |
| AAGATTGATTGAAGAAGCCG+AGG | 0.612741 | 7_3:-32630600 | Msa1101710:CDS |
| TATTTGAAGACTTACAATGC+AGG | 0.614305 | 7_3:+32630112 | None:intergenic |
| CAAAGCATACATCAAAAGGA+TGG | 0.615551 | 7_3:+32630735 | None:intergenic |
| TGGCCACGAGCAGCTGCAGG+GGG | 0.617063 | 7_3:+32630755 | None:intergenic |
| TAGGAAGTTTACTGATCCTG+TGG | 0.621004 | 7_3:-32631929 | Msa1101710:CDS |
| CAAGAGCATCAACCCTGATG+AGG | 0.621114 | 7_3:-32631065 | Msa1101710:CDS |
| TTGTACTTGAGGGAAATCAT+CGG | 0.621700 | 7_3:+32631850 | None:intergenic |
| TTTCACTCAACAAAGCAGCC+TGG | 0.623218 | 7_3:+32631020 | None:intergenic |
| CATAAGCGATTGCCTCATCA+GGG | 0.623921 | 7_3:+32631053 | None:intergenic |
| GAAAAGAGAACTGACTGTGA+TGG | 0.633914 | 7_3:-32631595 | Msa1101710:CDS |
| CTATGGTACTCACAAAGATG+CGG | 0.635011 | 7_3:-32631789 | Msa1101710:CDS |
| GGAACCCAAAAGCCCTAAGG+AGG | 0.640087 | 7_3:-32631381 | Msa1101710:CDS |
| AATACATGATGTCTTGGGTG+TGG | 0.643033 | 7_3:-32630933 | Msa1101710:CDS |
| CGTACTCTTGTGTTGCTGTG+TGG | 0.655627 | 7_3:-32632458 | Msa1101710:CDS |
| TCCTAGAAGATCCACCAACA+AGG | 0.665374 | 7_3:+32631140 | None:intergenic |
| AATGACACCAGCATCTATGG+TGG | 0.667765 | 7_3:+32631681 | None:intergenic |
| GGTGGAAACACTCACCTTGG+GGG | 0.675471 | 7_3:-32631478 | Msa1101710:CDS |
| AAAGATGCGGGAGATTGCAG+AGG | 0.680528 | 7_3:-32631776 | Msa1101710:CDS |
| CACAAGAGTACGTAGTACCA+AGG | 0.684270 | 7_3:+32632469 | None:intergenic |
| ATGATTTCCCTCAAGTACAA+GGG | 0.686901 | 7_3:-32631847 | Msa1101710:CDS |
| AACTTCCAACCAAGAGACAG+TGG | 0.687062 | 7_3:+32630956 | None:intergenic |
| CATCAAAAGTCCCACCACCA+AGG | 0.703356 | 7_3:+32631548 | None:intergenic |
| GATGGATACTGCAATTACCG+TGG | 0.724475 | 7_3:-32630441 | Msa1101710:CDS |
| GCTGTGTGGCATGAAGAACA+TGG | 0.753906 | 7_3:-32632444 | Msa1101710:CDS |
| AGTGCATGGAGACTGTTGAG+AGG | 0.754321 | 7_3:-32631210 | Msa1101710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACGATATAAACAT+AGG | + | chr7_3:32630222-32630241 | None:intergenic | 15.0% |
| !! | TTAAAAAGGTTTATTATTTG+TGG | - | chr7_3:32630396-32630415 | Msa1101710:CDS | 15.0% |
| !!! | TACAAAATTTTATTGTTTCT+AGG | - | chr7_3:32630544-32630563 | Msa1101710:CDS | 15.0% |
| !!! | TAAAGGTATATAATTAAGAA+AGG | - | chr7_3:32631017-32631036 | Msa1101710:CDS | 15.0% |
| !!! | AAAAAAATTTAGATCCATTT+TGG | - | chr7_3:32631111-32631130 | Msa1101710:CDS | 15.0% |
| !!! | CAAAATCTTTAAAACGAAAA+TGG | + | chr7_3:32630168-32630187 | None:intergenic | 20.0% |
| !!! | TAACTTTTCGTTTTTTGTTA+TGG | - | chr7_3:32630582-32630601 | Msa1101710:CDS | 20.0% |
| !! | AATTAAGTGAATAAATGCTT+AGG | - | chr7_3:32630621-32630640 | Msa1101710:CDS | 20.0% |
| !! | TACATTTGATTATTGAGTAA+AGG | - | chr7_3:32631000-32631019 | Msa1101710:CDS | 20.0% |
| !! | TTTGATCTATGATATAATGT+TGG | - | chr7_3:32631068-32631087 | Msa1101710:CDS | 20.0% |
| !!! | TATTTGAGACTTATAAGATT+AGG | - | chr7_3:32631179-32631198 | Msa1101710:CDS | 20.0% |
| !! | AAAATACATGAAGATCTATT+TGG | + | chr7_3:32631228-32631247 | None:intergenic | 20.0% |
| !!! | TAGATCTTCATGTATTTTAT+TGG | - | chr7_3:32631230-32631249 | Msa1101710:CDS | 20.0% |
| !! | TATTAACTAATCATTCATAG+AGG | + | chr7_3:32633022-32633041 | None:intergenic | 20.0% |
| !!! | GAATGATTAGTTAATATTTG+TGG | - | chr7_3:32633026-32633045 | Msa1101710:intron | 20.0% |
| !!! | TTTTATATGGTTAATACTTG+AGG | - | chr7_3:32633111-32633130 | Msa1101710:five_prime_UTR | 20.0% |
| ! | ATTTATGATTCAACACCATT+TGG | - | chr7_3:32630328-32630347 | Msa1101710:exon | 25.0% |
| ! | GTTTATTATTTGTGGTAGAA+AGG | - | chr7_3:32630404-32630423 | Msa1101710:CDS | 25.0% |
| ! | CATGTTATATACGTTCTTTA+TGG | - | chr7_3:32630467-32630486 | Msa1101710:CDS | 25.0% |
| !!! | TATGGATTCTATGTTGATTT+TGG | - | chr7_3:32630485-32630504 | Msa1101710:CDS | 25.0% |
| !!! | CTTAATTTGTCAAACAGATA+AGG | + | chr7_3:32630608-32630627 | None:intergenic | 25.0% |
| !!! | ATAAATGCTTAGGTTTTAGA+TGG | - | chr7_3:32630631-32630650 | Msa1101710:CDS | 25.0% |
| !!! | ATTTTGGTCCATCATTTTTT+GGG | - | chr7_3:32631127-32631146 | Msa1101710:CDS | 25.0% |
| ! | AAAAATGTCCCAAAAAATGA+TGG | + | chr7_3:32631138-32631157 | None:intergenic | 25.0% |
| !! | TAAGATTAGGTTCTTACTTT+TGG | - | chr7_3:32631192-32631211 | Msa1101710:CDS | 25.0% |
| !!! | TATTTTATTGGTGACTGATT+AGG | - | chr7_3:32631242-32631261 | Msa1101710:CDS | 25.0% |
| ! | TACAAAAAGACATAATGTTG+TGG | - | chr7_3:32631351-32631370 | Msa1101710:CDS | 25.0% |
| !!! | AATATTTTTGTCTTTGACCT+TGG | - | chr7_3:32631692-32631711 | Msa1101710:CDS | 25.0% |
| ! | TCTTCTTACAATTAAGGATA+AGG | - | chr7_3:32631736-32631755 | Msa1101710:CDS | 25.0% |
| ! | GATCAAAAGGAAGAAAAATT+TGG | - | chr7_3:32631844-32631863 | Msa1101710:CDS | 25.0% |
| ! | AAGAAAAATTTGGACATCAT+TGG | - | chr7_3:32631854-32631873 | Msa1101710:CDS | 25.0% |
| ! | AGAAAAATTTGGACATCATT+GGG | - | chr7_3:32631855-32631874 | Msa1101710:CDS | 25.0% |
| ! | AAGTTAATACATGATGTCTT+GGG | - | chr7_3:32632319-32632338 | Msa1101710:CDS | 25.0% |
| !!! | TTCTCACTTGATATTTTAAG+TGG | - | chr7_3:32632958-32632977 | Msa1101710:intron | 25.0% |
| !!! | TGCTTCTTTAAGGTTTTATA+TGG | - | chr7_3:32633098-32633117 | Msa1101710:five_prime_UTR | 25.0% |
| ATGAAAAGTGAGATTGAGTT+TGG | + | chr7_3:32630110-32630129 | None:intergenic | 30.0% | |
| AATGGTTCAAAATGAGATCT+TGG | + | chr7_3:32630150-32630169 | None:intergenic | 30.0% | |
| ! | TCGTTTTCATTGCAAGATTA+TGG | - | chr7_3:32630731-32630750 | Msa1101710:CDS | 30.0% |
| ATTATGGCGAAAAAAGATGA+AGG | - | chr7_3:32630747-32630766 | Msa1101710:CDS | 30.0% | |
| GAGATTATTCACAATGATCA+AGG | - | chr7_3:32630843-32630862 | Msa1101710:CDS | 30.0% | |
| !! | CAAAAAATGATGGACCAAAA+TGG | + | chr7_3:32631128-32631147 | None:intergenic | 30.0% |
| !! | CATTTTGGTCCATCATTTTT+TGG | - | chr7_3:32631126-32631145 | Msa1101710:CDS | 30.0% |
| ! | TTAATTTTACAGATGCCAAG+AGG | - | chr7_3:32631297-32631316 | Msa1101710:CDS | 30.0% |
| ! | ATTATGTCTTTTTGTACCAC+AGG | + | chr7_3:32631347-32631366 | None:intergenic | 30.0% |
| TGTGTCTCTTCTTACAATTA+AGG | - | chr7_3:32631730-32631749 | Msa1101710:CDS | 30.0% | |
| ! | AGAGGACTTTGATAATAGAA+TGG | - | chr7_3:32631802-32631821 | Msa1101710:CDS | 30.0% |
| ! | AATGGTGAACTATTTTGTAG+AGG | - | chr7_3:32631820-32631839 | Msa1101710:CDS | 30.0% |
| ! | ATTTTGTAGAGGAGATCAAA+AGG | - | chr7_3:32631831-32631850 | Msa1101710:CDS | 30.0% |
| AAAGTTTGAGGAGATCAATA+TGG | - | chr7_3:32632012-32632031 | Msa1101710:intron | 30.0% | |
| GAAGTTAATACATGATGTCT+TGG | - | chr7_3:32632318-32632337 | Msa1101710:CDS | 30.0% | |
| !! | TATTGATTTGTCTTCTTGAC+AGG | + | chr7_3:32632373-32632392 | None:intergenic | 30.0% |
| TGTCAATTAAGACACTTGTT+TGG | + | chr7_3:32632414-32632433 | None:intergenic | 30.0% | |
| TGTCTTAATTGACATCTATG+AGG | - | chr7_3:32632420-32632439 | Msa1101710:CDS | 30.0% | |
| GTCTTAATTGACATCTATGA+GGG | - | chr7_3:32632421-32632440 | Msa1101710:CDS | 30.0% | |
| ACATCAAAGCATACATCAAA+AGG | + | chr7_3:32632529-32632548 | None:intergenic | 30.0% | |
| !!! | TATTTTGACAGTTTCTGCTA+TGG | - | chr7_3:32632561-32632580 | Msa1101710:intron | 30.0% |
| CTTACAATAACCAATGACAT+AGG | - | chr7_3:32632610-32632629 | Msa1101710:intron | 30.0% | |
| TTCAGAAGAAAACAAGAAGA+TGG | - | chr7_3:32632798-32632817 | Msa1101710:intron | 30.0% | |
| AAATGAAAGTGATGTTCTTC+AGG | - | chr7_3:32632870-32632889 | Msa1101710:intron | 30.0% | |
| TACTGTATTCTGCTTCTTTA+AGG | - | chr7_3:32633088-32633107 | Msa1101710:five_prime_UTR | 30.0% | |
| TATGGTTAATACTTGAGGTT+TGG | - | chr7_3:32633116-32633135 | Msa1101710:five_prime_UTR | 30.0% | |
| TATTTGAAGACTTACAATGC+AGG | + | chr7_3:32633148-32633167 | None:intergenic | 30.0% | |
| !! | TTTGGTGTTGGTATGAGATA+AGG | + | chr7_3:32630092-32630111 | None:intergenic | 35.0% |
| ! | TTTTGCATCACTTTCCAGTA+AGG | - | chr7_3:32630183-32630202 | Msa1101710:three_prime_UTR | 35.0% |
| !!! | TTTTTTTTTGTGTGCGTGTG+TGG | - | chr7_3:32630240-32630259 | Msa1101710:three_prime_UTR | 35.0% |
| !!! | TCAACACCATTTGGTGTTTT+TGG | - | chr7_3:32630337-32630356 | Msa1101710:CDS | 35.0% |
| ACCATTGCTTGAGCTTAAAA+AGG | - | chr7_3:32630382-32630401 | Msa1101710:CDS | 35.0% | |
| !! | ACCTTTTTAAGCTCAAGCAA+TGG | + | chr7_3:32630386-32630405 | None:intergenic | 35.0% |
| ATACCCTTAATGTCATCAAC+AGG | + | chr7_3:32630680-32630699 | None:intergenic | 35.0% | |
| TCTTGCAATGAAAACGAACA+AGG | + | chr7_3:32630728-32630747 | None:intergenic | 35.0% | |
| AAAGATGAAGGATGTGCTAT+TGG | - | chr7_3:32630759-32630778 | Msa1101710:CDS | 35.0% | |
| ! | TACCAAAGACAGTGTTTTCT+GGG | + | chr7_3:32630953-32630972 | None:intergenic | 35.0% |
| ! | TTACCAAAGACAGTGTTTTC+TGG | + | chr7_3:32630954-32630973 | None:intergenic | 35.0% |
| TTGTACTTGAGGGAAATCAT+CGG | + | chr7_3:32631410-32631429 | None:intergenic | 35.0% | |
| ATGATTTCCCTCAAGTACAA+GGG | - | chr7_3:32631410-32631429 | Msa1101710:CDS | 35.0% | |
| TGAGAATCGTTGAAATAAGC+AGG | + | chr7_3:32631548-32631567 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCTTTGACCTTGG+TGG | - | chr7_3:32631695-32631714 | Msa1101710:CDS | 35.0% |
| TCTCCATGCACTCATTAAAA+AGG | + | chr7_3:32632039-32632058 | None:intergenic | 35.0% | |
| ! | GTGTTTTACTGATGCTAAGA+TGG | - | chr7_3:32632069-32632088 | Msa1101710:intron | 35.0% |
| CAAAGCATACATCAAAAGGA+TGG | + | chr7_3:32632525-32632544 | None:intergenic | 35.0% | |
| TGCTTTGATGTCGATCAAAA+TGG | - | chr7_3:32632538-32632557 | Msa1101710:intron | 35.0% | |
| CAATAACCAATGACATAGGA+AGG | - | chr7_3:32632614-32632633 | Msa1101710:intron | 35.0% | |
| AGAATTTCCCATCATCGATA+CGG | + | chr7_3:32632687-32632706 | None:intergenic | 35.0% | |
| TGATGGGAAATTCTTGAGAA+AGG | - | chr7_3:32632693-32632712 | Msa1101710:intron | 35.0% | |
| GAGAAATGTGTTGAAGAAGA+AGG | - | chr7_3:32632756-32632775 | Msa1101710:intron | 35.0% | |
| ATCCACATCAAGCAAATTTG+CGG | + | chr7_3:32632842-32632861 | None:intergenic | 35.0% | |
| AGTATGTATGAGCGCATTAT+AGG | - | chr7_3:32632913-32632932 | Msa1101710:intron | 35.0% | |
| TGAGAACATAAAAACCTAGC+AGG | + | chr7_3:32632944-32632963 | None:intergenic | 35.0% | |
| ! | TATGAGATAAGGCGTCTTGT+TGG | + | chr7_3:32630081-32630100 | None:intergenic | 40.0% |
| !! | AGTGAGATTGAGTTTGGTGT+TGG | + | chr7_3:32630104-32630123 | None:intergenic | 40.0% |
| GAATGTTGACAGAACCTTAC+TGG | + | chr7_3:32630200-32630219 | None:intergenic | 40.0% | |
| TGCAAGCCAAAAACACCAAA+TGG | + | chr7_3:32630346-32630365 | None:intergenic | 40.0% | |
| !! | TCGTCCTGTTGATGACATTA+AGG | - | chr7_3:32630673-32630692 | Msa1101710:CDS | 40.0% |
| !! | CGTCCTGTTGATGACATTAA+GGG | - | chr7_3:32630674-32630693 | Msa1101710:CDS | 40.0% |
| ! | TGTGCTATTGGAATAGACCT+TGG | - | chr7_3:32630771-32630790 | Msa1101710:CDS | 40.0% |
| AACCCAGAAAACACTGTCTT+TGG | - | chr7_3:32630948-32630967 | Msa1101710:CDS | 40.0% | |
| TAGGAAGTTTACTGATCCTG+TGG | - | chr7_3:32631328-32631347 | Msa1101710:CDS | 40.0% | |
| GATGATTTCCCTCAAGTACA+AGG | - | chr7_3:32631409-32631428 | Msa1101710:CDS | 40.0% | |
| CTATGGTACTCACAAAGATG+CGG | - | chr7_3:32631468-32631487 | Msa1101710:CDS | 40.0% | |
| TATGGTACTCACAAAGATGC+GGG | - | chr7_3:32631469-32631488 | Msa1101710:CDS | 40.0% | |
| !! | TGCTGGTCTCAATGTTTTGA+AGG | - | chr7_3:32631598-32631617 | Msa1101710:CDS | 40.0% |
| ! | CACAGTCAGTTCTCTTTTCA+AGG | + | chr7_3:32631661-32631680 | None:intergenic | 40.0% |
| GAAAAGAGAACTGACTGTGA+TGG | - | chr7_3:32631662-32631681 | Msa1101710:CDS | 40.0% | |
| GGATAAGGTCTTCGAAGTTA+AGG | - | chr7_3:32631751-32631770 | Msa1101710:CDS | 40.0% | |
| AATCTCTCGTGCAAAGTTTG+AGG | - | chr7_3:32632000-32632019 | Msa1101710:intron | 40.0% | |
| ! | GGACCTTTTTAATGAGTGCA+TGG | - | chr7_3:32632033-32632052 | Msa1101710:intron | 40.0% |
| !! | GTTGATGATGTTGTCCTTGT+TGG | - | chr7_3:32632103-32632122 | Msa1101710:intron | 40.0% |
| TGCAATAGTTGCTGCACTTT+AGG | + | chr7_3:32632145-32632164 | None:intergenic | 40.0% | |
| TAAAGTGCAGCAACTATTGC+AGG | - | chr7_3:32632144-32632163 | Msa1101710:intron | 40.0% | |
| CTATTGCAGGACTTCTTCTA+CGG | - | chr7_3:32632157-32632176 | Msa1101710:intron | 40.0% | |
| TATTGCAGGACTTCTTCTAC+GGG | - | chr7_3:32632158-32632177 | Msa1101710:intron | 40.0% | |
| ACATCGATCAACACCAAGTT+TGG | + | chr7_3:32632277-32632296 | None:intergenic | 40.0% | |
| AATACATGATGTCTTGGGTG+TGG | - | chr7_3:32632324-32632343 | Msa1101710:CDS | 40.0% | |
| ! | ACAGGAATTGAAGTGTTCCT+AGG | + | chr7_3:32632355-32632374 | None:intergenic | 40.0% |
| ! | AGATGATTGTCACTTGCTCT+TGG | + | chr7_3:32632454-32632473 | None:intergenic | 40.0% |
| GCAAGTGACAATCATCTTCT+TGG | - | chr7_3:32632457-32632476 | Msa1101710:CDS | 40.0% | |
| ! | CTTGGTTCTTTCACTCTTTC+TGG | - | chr7_3:32632475-32632494 | Msa1101710:CDS | 40.0% |
| AAGCTCGTTCTTACTATCAG+TGG | + | chr7_3:32632593-32632612 | None:intergenic | 40.0% | |
| AAGATTGATTGAAGAAGCCG+AGG | - | chr7_3:32632657-32632676 | Msa1101710:intron | 40.0% | |
| ! | CACAAGAGTACGTAGTACCA+AGG | + | chr7_3:32630791-32630810 | None:intergenic | 45.0% |
| TGAGCGAAAGCAACAAAGGA+AGG | + | chr7_3:32630882-32630901 | None:intergenic | 45.0% | |
| CTCTTGAGCGAAAGCAACAA+AGG | + | chr7_3:32630886-32630905 | None:intergenic | 45.0% | |
| !! | CTTTGTTGCTTTCGCTCAAG+AGG | - | chr7_3:32630884-32630903 | Msa1101710:CDS | 45.0% |
| TTGCTTTCGCTCAAGAGGAA+CGG | - | chr7_3:32630889-32630908 | Msa1101710:CDS | 45.0% | |
| ACAGATGCCAAGAGGCTAAT+TGG | - | chr7_3:32631305-32631324 | Msa1101710:CDS | 45.0% | |
| ATGCCAAGAGGCTAATTGGT+AGG | - | chr7_3:32631309-32631328 | Msa1101710:CDS | 45.0% | |
| ! | CTTCCTACCAATTAGCCTCT+TGG | + | chr7_3:32631315-32631334 | None:intergenic | 45.0% |
| GTGGCCATTCAAAGTCATTG+CGG | - | chr7_3:32631370-32631389 | Msa1101710:CDS | 45.0% | |
| TGGCCATTCAAAGTCATTGC+GGG | - | chr7_3:32631371-32631390 | Msa1101710:CDS | 45.0% | |
| TGCTGAGGAAATCTCGTCTA+TGG | - | chr7_3:32631451-32631470 | Msa1101710:CDS | 45.0% | |
| ! | AGAGGCATATCTGGAATCAC+TGG | - | chr7_3:32631499-32631518 | Msa1101710:CDS | 45.0% |
| AGAAAAGCCACCATAGATGC+TGG | - | chr7_3:32631569-32631588 | Msa1101710:CDS | 45.0% | |
| AATGACACCAGCATCTATGG+TGG | + | chr7_3:32631579-32631598 | None:intergenic | 45.0% | |
| AGCAATGACACCAGCATCTA+TGG | + | chr7_3:32631582-32631601 | None:intergenic | 45.0% | |
| !! | ATAGATGCTGGTGTCATTGC+TGG | - | chr7_3:32631581-32631600 | Msa1101710:CDS | 45.0% |
| TATGCAATAGCTGCAGCAGT+TGG | + | chr7_3:32631635-32631654 | None:intergenic | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | - | chr7_3:32631635-32631654 | Msa1101710:CDS | 45.0% | |
| TTTGTCTTTGACCTTGGTGG+TGG | - | chr7_3:32631698-32631717 | Msa1101710:CDS | 45.0% | |
| ! | TTGTCTTTGACCTTGGTGGT+GGG | - | chr7_3:32631699-32631718 | Msa1101710:CDS | 45.0% |
| ! | TCAACCTCCTTAGGGCTTTT+GGG | + | chr7_3:32631883-32631902 | None:intergenic | 45.0% |
| TGCTGTTGTCACCAATGTTG+AGG | - | chr7_3:32631940-32631959 | Msa1101710:CDS | 45.0% | |
| !! | CAAAGCATCGACCTCAACAT+TGG | + | chr7_3:32631954-32631973 | None:intergenic | 45.0% |
| !! | TGAGGTCGATGCTTTGTTTC+AGG | - | chr7_3:32631958-32631977 | Msa1101710:intron | 45.0% |
| !! | GAGGTCGATGCTTTGTTTCA+GGG | - | chr7_3:32631959-32631978 | Msa1101710:intron | 45.0% |
| GATGATGTTGTCCTTGTTGG+TGG | - | chr7_3:32632106-32632125 | Msa1101710:intron | 45.0% | |
| ! | TCCTTGTTGGTGGATCTTCT+AGG | - | chr7_3:32632116-32632135 | Msa1101710:intron | 45.0% |
| TCCTAGAAGATCCACCAACA+AGG | + | chr7_3:32632120-32632139 | None:intergenic | 45.0% | |
| CATAAGCGATTGCCTCATCA+GGG | + | chr7_3:32632207-32632226 | None:intergenic | 45.0% | |
| TTTCACTCAACAAAGCAGCC+TGG | + | chr7_3:32632240-32632259 | None:intergenic | 45.0% | |
| CACCTCGAATGTTCCAAACT+TGG | - | chr7_3:32632261-32632280 | Msa1101710:intron | 45.0% | |
| ! | CACCAAGTTTGGAACATTCG+AGG | + | chr7_3:32632266-32632285 | None:intergenic | 45.0% |
| AACTTCCAACCAAGAGACAG+TGG | + | chr7_3:32632304-32632323 | None:intergenic | 45.0% | |
| CGACAACCTTCCTATGTCAT+TGG | + | chr7_3:32632623-32632642 | None:intergenic | 45.0% | |
| ATCATCGATACGGTAAGCCT+CGG | + | chr7_3:32632677-32632696 | None:intergenic | 45.0% | |
| ! | AGGCTTACCGTATCGATGAT+GGG | - | chr7_3:32632677-32632696 | Msa1101710:intron | 45.0% |
| GATGGATACTGCAATTACCG+TGG | - | chr7_3:32632816-32632835 | Msa1101710:intron | 45.0% | |
| ATCAAGCAAATTTGCGGCCA+CGG | + | chr7_3:32632836-32632855 | None:intergenic | 45.0% | |
| CATTATAGGCAAGTCCTGCT+AGG | - | chr7_3:32632927-32632946 | Msa1101710:intron | 45.0% | |
| ! | CGTACTCTTGTGTTGCTGTG+TGG | - | chr7_3:32630799-32630818 | Msa1101710:CDS | 50.0% |
| GCTGTGTGGCATGAAGAACA+TGG | - | chr7_3:32630813-32630832 | Msa1101710:CDS | 50.0% | |
| GCTCAAGAGGAACGGTTGAT+TGG | - | chr7_3:32630897-32630916 | Msa1101710:CDS | 50.0% | |
| ACGCCCGCAATGACTTTGAA+TGG | + | chr7_3:32631377-32631396 | None:intergenic | 50.0% | |
| TTCCCTCAAGTACAAGGGAC+AGG | - | chr7_3:32631415-32631434 | Msa1101710:CDS | 50.0% | |
| CTCCTGTCCCTTGTACTTGA+GGG | + | chr7_3:32631420-32631439 | None:intergenic | 50.0% | |
| TCTCCTGTCCCTTGTACTTG+AGG | + | chr7_3:32631421-32631440 | None:intergenic | 50.0% | |
| ! | GGAGAAGCTCTTTTGTGCTG+AGG | - | chr7_3:32631436-32631455 | Msa1101710:CDS | 50.0% |
| AAAGATGCGGGAGATTGCAG+AGG | - | chr7_3:32631481-32631500 | Msa1101710:CDS | 50.0% | |
| ! | GGAGATTGCAGAGGCATATC+TGG | - | chr7_3:32631490-32631509 | Msa1101710:CDS | 50.0% |
| CATCAAAAGTCCCACCACCA+AGG | + | chr7_3:32631712-32631731 | None:intergenic | 50.0% | |
| GTCTTCGAAGTTAAGGCCAC+TGG | - | chr7_3:32631758-32631777 | Msa1101710:CDS | 50.0% | |
| TTCGAAGTTAAGGCCACTGG+TGG | - | chr7_3:32631761-32631780 | Msa1101710:CDS | 50.0% | |
| AAGGTGAGTGTTTCCACCAG+TGG | + | chr7_3:32631777-32631796 | None:intergenic | 50.0% | |
| ACTGGTGGAAACACTCACCT+TGG | - | chr7_3:32631776-32631795 | Msa1101710:CDS | 50.0% | |
| CTGGTGGAAACACTCACCTT+GGG | - | chr7_3:32631777-32631796 | Msa1101710:CDS | 50.0% | |
| TGGTGGAAACACTCACCTTG+GGG | - | chr7_3:32631778-32631797 | Msa1101710:CDS | 50.0% | |
| TATCAAAGTCCTCTCCCCCA+AGG | + | chr7_3:32631796-32631815 | None:intergenic | 50.0% | |
| TTGGGAACCCAAAAGCCCTA+AGG | - | chr7_3:32631873-32631892 | Msa1101710:CDS | 50.0% | |
| ! | CTCAACCTCCTTAGGGCTTT+TGG | + | chr7_3:32631884-32631903 | None:intergenic | 50.0% |
| CGCAGTTCTCAACCTCCTTA+GGG | + | chr7_3:32631891-32631910 | None:intergenic | 50.0% | |
| ACGCAGTTCTCAACCTCCTT+AGG | + | chr7_3:32631892-32631911 | None:intergenic | 50.0% | |
| AGTGCATGGAGACTGTTGAG+AGG | - | chr7_3:32632047-32632066 | Msa1101710:intron | 50.0% | |
| !! | CAAGAGCATCAACCCTGATG+AGG | - | chr7_3:32632192-32632211 | Msa1101710:intron | 50.0% |
| CCATAAGCGATTGCCTCATC+AGG | + | chr7_3:32632208-32632227 | None:intergenic | 50.0% | |
| CCTGATGAGGCAATCGCTTA+TGG | - | chr7_3:32632205-32632224 | Msa1101710:intron | 50.0% | |
| TCTTGGGTGTGGTGATTCCT+AGG | - | chr7_3:32632335-32632354 | Msa1101710:CDS | 50.0% | |
| ! | GAGGCTTACCGTATCGATGA+TGG | - | chr7_3:32632676-32632695 | Msa1101710:intron | 50.0% |
| GGCTGAAGTCATGAATGCTC+TGG | - | chr7_3:32632714-32632733 | Msa1101710:intron | 50.0% | |
| ! | GGCCGCAAATTTGCTTGATG+TGG | - | chr7_3:32632837-32632856 | Msa1101710:intron | 50.0% |
| GGTGGAAACACTCACCTTGG+GGG | - | chr7_3:32631779-32631798 | Msa1101710:CDS | 55.0% | |
| AAACACTCACCTTGGGGGAG+AGG | - | chr7_3:32631784-32631803 | Msa1101710:CDS | 55.0% | |
| GGAACCCAAAAGCCCTAAGG+AGG | - | chr7_3:32631876-32631895 | Msa1101710:CDS | 55.0% | |
| GTTGAGAACTGCGTGCGAGA+AGG | - | chr7_3:32631898-32631917 | Msa1101710:CDS | 55.0% | |
| CTGCGTGCGAGAAGGCAAAA+AGG | - | chr7_3:32631906-32631925 | Msa1101710:CDS | 55.0% | |
| GCAGGACTTCTTCTACGGGA+AGG | - | chr7_3:32632162-32632181 | Msa1101710:intron | 55.0% | |
| GATGTCGCACCACTGTCTCT+TGG | - | chr7_3:32632292-32632311 | Msa1101710:intron | 55.0% | |
| TCGCACCACTGTCTCTTGGT+TGG | - | chr7_3:32632296-32632315 | Msa1101710:intron | 55.0% | |
| CGCTTATGGCGCAGCTGTCC+AGG | - | chr7_3:32632219-32632238 | Msa1101710:intron | 65.0% | |
| TTACCCCCTGCAGCTGCTCG+TGG | - | chr7_3:32632499-32632518 | Msa1101710:CDS | 65.0% | |
| ATGGCCACGAGCAGCTGCAG+GGG | + | chr7_3:32632506-32632525 | None:intergenic | 65.0% | |
| GATGGCCACGAGCAGCTGCA+GGG | + | chr7_3:32632507-32632526 | None:intergenic | 65.0% | |
| TGGCCACGAGCAGCTGCAGG+GGG | + | chr7_3:32632505-32632524 | None:intergenic | 70.0% | |
| GGATGGCCACGAGCAGCTGC+AGG | + | chr7_3:32632508-32632527 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 32630063 | 32633216 | 32630063 | ID=Msa1101710;Name=Msa1101710 |
| chr7_3 | mRNA | 32630063 | 32633216 | 32630063 | ID=Msa1101710-mRNA-1;Parent=Msa1101710;Name=Msa1101710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=140|1|1|1|0.5|0.33|3|268|619 |
| chr7_3 | exon | 32630063 | 32631970 | 32630063 | ID=Msa1101710-mRNA-1:exon:7102;Parent=Msa1101710-mRNA-1 |
| chr7_3 | exon | 32632310 | 32632532 | 32632310 | ID=Msa1101710-mRNA-1:exon:7101;Parent=Msa1101710-mRNA-1 |
| chr7_3 | exon | 32633080 | 32633216 | 32633080 | ID=Msa1101710-mRNA-1:exon:7100;Parent=Msa1101710-mRNA-1 |
| chr7_3 | five_prime_UTR | 32633080 | 32633216 | 32633080 | ID=Msa1101710-mRNA-1:five_prime_utr;Parent=Msa1101710-mRNA-1 |
| chr7_3 | five_prime_UTR | 32632530 | 32632532 | 32632530 | ID=Msa1101710-mRNA-1:five_prime_utr;Parent=Msa1101710-mRNA-1 |
| chr7_3 | CDS | 32632310 | 32632529 | 32632310 | ID=Msa1101710-mRNA-1:cds;Parent=Msa1101710-mRNA-1 |
| chr7_3 | CDS | 32630331 | 32631970 | 32630331 | ID=Msa1101710-mRNA-1:cds;Parent=Msa1101710-mRNA-1 |
| chr7_3 | three_prime_UTR | 32630063 | 32630330 | 32630063 | ID=Msa1101710-mRNA-1:three_prime_utr;Parent=Msa1101710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
