Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117660 | KEH23560.1 | 48.913 | 92 | 5 | 1 | 9 | 58 | 145 | 236 | 5.28e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1117660 | A0A072UCI4 | 48.913 | 92 | 5 | 1 | 9 | 58 | 145 | 236 | 2.52e-14 | 74.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa1117660 | 0.802399 | 5.715556e-49 | -8.615850e-47 |
| Msa0017510 | Msa1117660 | 0.849422 | 3.266692e-60 | -8.615850e-47 |
| Msa0657970 | Msa1117660 | 0.839708 | 1.347764e-57 | -8.615850e-47 |
| Msa0669320 | Msa1117660 | 0.802304 | 5.978319e-49 | -8.615850e-47 |
| Msa0681270 | Msa1117660 | 0.805440 | 1.333795e-49 | -8.615850e-47 |
| Msa0731940 | Msa1117660 | 0.801316 | 9.537719e-49 | -8.615850e-47 |
| Msa0743720 | Msa1117660 | 0.819990 | 8.689293e-53 | -8.615850e-47 |
| Msa0801760 | Msa1117660 | 0.809626 | 1.724416e-50 | -8.615850e-47 |
| Msa0810220 | Msa1117660 | 0.821835 | 3.268778e-53 | -8.615850e-47 |
| Msa0822870 | Msa1117660 | 0.809974 | 1.451068e-50 | -8.615850e-47 |
| Msa0832370 | Msa1117660 | 0.808885 | 2.486155e-50 | -8.615850e-47 |
| Msa0139060 | Msa1117660 | 0.803640 | 3.165511e-49 | -8.615850e-47 |
| Msa0157290 | Msa1117660 | 0.850346 | 1.802277e-60 | -8.615850e-47 |
| Msa0200260 | Msa1117660 | 0.822327 | 2.513290e-53 | -8.615850e-47 |
| Msa0215320 | Msa1117660 | -0.802144 | 6.449295e-49 | -8.615850e-47 |
| Msa0220580 | Msa1117660 | 0.823747 | 1.172634e-53 | -8.615850e-47 |
| Msa0220740 | Msa1117660 | 0.812152 | 4.895547e-51 | -8.615850e-47 |
| Msa0222700 | Msa1117660 | 0.801755 | 7.753748e-49 | -8.615850e-47 |
| Msa0226890 | Msa1117660 | 0.804801 | 1.814748e-49 | -8.615850e-47 |
| Msa0379640 | Msa1117660 | 0.805529 | 1.277576e-49 | -8.615850e-47 |
| Msa0402290 | Msa1117660 | 0.813472 | 2.515955e-51 | -8.615850e-47 |
| Msa0416300 | Msa1117660 | 0.803862 | 2.846824e-49 | -8.615850e-47 |
| Msa0417270 | Msa1117660 | 0.803303 | 3.718482e-49 | -8.615850e-47 |
| Msa0417500 | Msa1117660 | 0.800508 | 1.394534e-48 | -8.615850e-47 |
| Msa0998690 | Msa1117660 | 0.800365 | 1.491374e-48 | -8.615850e-47 |
| Msa1014540 | Msa1117660 | 0.823026 | 1.728699e-53 | -8.615850e-47 |
| Msa1075220 | Msa1117660 | -0.808072 | 3.707185e-50 | -8.615850e-47 |
| Msa1082500 | Msa1117660 | 0.815446 | 9.205430e-52 | -8.615850e-47 |
| Msa0243100 | Msa1117660 | 0.804948 | 1.690574e-49 | -8.615850e-47 |
| Msa0264040 | Msa1117660 | 0.802636 | 5.106515e-49 | -8.615850e-47 |
| Msa0344910 | Msa1117660 | 0.815791 | 7.714046e-52 | -8.615850e-47 |
| Msa0344980 | Msa1117660 | 0.804346 | 2.257263e-49 | -8.615850e-47 |
| Msa0355220 | Msa1117660 | 0.806289 | 8.841990e-50 | -8.615850e-47 |
| Msa1117660 | Msa1122250 | 0.802196 | 6.291283e-49 | -8.615850e-47 |
| Msa1117660 | Msa1147900 | 0.804266 | 2.346445e-49 | -8.615850e-47 |
| Msa1117660 | Msa1154710 | 0.800028 | 1.746804e-48 | -8.615850e-47 |
| Msa1117660 | Msa1162550 | -0.804026 | 2.631643e-49 | -8.615850e-47 |
| Msa1117660 | Msa1199220 | 0.805132 | 1.547013e-49 | -8.615850e-47 |
| Msa1117660 | Msa1205130 | 0.803485 | 3.409267e-49 | -8.615850e-47 |
| Msa1117660 | Msa1233890 | 0.817497 | 3.197895e-52 | -8.615850e-47 |
| Msa1117660 | Msa1244250 | 0.804976 | 1.667577e-49 | -8.615850e-47 |
| Msa1117660 | Msa1253020 | 0.844274 | 8.368017e-59 | -8.615850e-47 |
| Msa1117660 | Msa1283860 | 0.806976 | 6.332743e-50 | -8.615850e-47 |
| Msa1117660 | Msa1284680 | 0.808734 | 2.676943e-50 | -8.615850e-47 |
| Msa1117660 | Msa1306850 | 0.801365 | 9.318439e-49 | -8.615850e-47 |
| Msa1117660 | Msa1317980 | 0.807453 | 5.018121e-50 | -8.615850e-47 |
| Msa1117660 | Msa1318990 | 0.807195 | 5.690556e-50 | -8.615850e-47 |
| Msa1117660 | Msa1324500 | 0.806635 | 7.476092e-50 | -8.615850e-47 |
| Msa1117660 | Msa1359040 | 0.837648 | 4.591944e-57 | -8.615850e-47 |
| Msa1117660 | Msa1360060 | 0.814832 | 1.260219e-51 | -8.615850e-47 |
| Msa1117660 | Msa1372760 | 0.822539 | 2.243726e-53 | -8.615850e-47 |
| Msa1117660 | Msa1374550 | 0.807866 | 4.100684e-50 | -8.615850e-47 |
| Msa1117660 | Msa1384350 | 0.800079 | 1.705114e-48 | -8.615850e-47 |
| Msa1117660 | Msa1392260 | 0.800209 | 1.604730e-48 | -8.615850e-47 |
| Msa1117660 | Msa1397860 | 0.800974 | 1.120139e-48 | -8.615850e-47 |
| Msa1117660 | Msa1411020 | 0.812810 | 3.514517e-51 | -8.615850e-47 |
| Msa1117660 | Msa1420490 | 0.803024 | 4.247013e-49 | -8.615850e-47 |
| Msa1117660 | Msa1423390 | 0.801424 | 9.061766e-49 | -8.615850e-47 |
| Msa1117660 | Msa1424290 | 0.813659 | 2.288982e-51 | -8.615850e-47 |
| Msa1117660 | Msa1434350 | 0.814423 | 1.552399e-51 | -8.615850e-47 |
| Msa1117660 | Msa1439320 | 0.813901 | 2.024530e-51 | -8.615850e-47 |
| Msa1117660 | Msa1440370 | 0.802800 | 4.724517e-49 | -8.615850e-47 |
| Msa1117660 | Msa1440810 | 0.804860 | 1.763960e-49 | -8.615850e-47 |
| Msa1117660 | Msa1442450 | 0.801413 | 9.112360e-49 | -8.615850e-47 |
| Msa1117660 | Msa1452240 | 0.806179 | 9.327811e-50 | -8.615850e-47 |
| Msa0484780 | Msa1117660 | 0.802769 | 4.793091e-49 | -8.615850e-47 |
| Msa0512900 | Msa1117660 | 0.808320 | 3.281480e-50 | -8.615850e-47 |
| Msa0562440 | Msa1117660 | 0.804996 | 1.652112e-49 | -8.615850e-47 |
| Msa0880140 | Msa1117660 | 0.847411 | 1.176307e-59 | -8.615850e-47 |
| Msa0896750 | Msa1117660 | 0.809448 | 1.882445e-50 | -8.615850e-47 |
| Msa0954130 | Msa1117660 | 0.804399 | 2.200922e-49 | -8.615850e-47 |
| Msa0969520 | Msa1117660 | 0.817495 | 3.200983e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 10 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTAACATCATATGTTTGC+TGG | 0.343557 | 7_3:-66106628 | Msa1117660:CDS |
| AGTTTAATTGGATTGTTGTC+AGG | 0.426187 | 7_3:-66106598 | Msa1117660:CDS |
| TATGATGTTAGAGTGTTCAT+AGG | 0.447278 | 7_3:+66106638 | None:intergenic |
| TCTAACATCATATGTTTGCT+GGG | 0.493277 | 7_3:-66106627 | Msa1117660:CDS |
| GGGGATCTTCCAGAAGCGCT+TGG | 0.552675 | 7_3:+66106572 | None:intergenic |
| TTAATTGGATTGTTGTCAGG+TGG | 0.585684 | 7_3:-66106595 | Msa1117660:CDS |
| GTTCTTACCAGTAGAGACGA+GGG | 0.643360 | 7_3:+66106551 | None:intergenic |
| GGTTCTTACCAGTAGAGACG+AGG | 0.678448 | 7_3:+66106550 | None:intergenic |
| TTCTTACCAGTAGAGACGAG+GGG | 0.686712 | 7_3:+66106552 | None:intergenic |
| TCTTACCAGTAGAGACGAGG+GGG | 0.717026 | 7_3:+66106553 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATACTTAAAAAGTTAAAA+AGG | - | chr7_3:66107322-66107341 | Msa1117660:intron | 10.0% |
| !! | TATACTTAAAAAGTTAAAAA+GGG | - | chr7_3:66107323-66107342 | Msa1117660:intron | 10.0% |
| !! | TTATATATCTAATATATACA+AGG | - | chr7_3:66107379-66107398 | Msa1117660:intron | 10.0% |
| !! | TTATACTTAAAAAGTTAAAA+AGG | - | chr7_3:66107322-66107341 | Msa1117660:intron | 10.0% |
| !! | TATACTTAAAAAGTTAAAAA+GGG | - | chr7_3:66107323-66107342 | Msa1117660:intron | 10.0% |
| !! | TTATATATCTAATATATACA+AGG | - | chr7_3:66107379-66107398 | Msa1117660:intron | 10.0% |
| !! | ATTTCAAATCTACTTCATTT+GGG | + | chr7_3:66106085-66106104 | None:intergenic | 20.0% |
| !! | AATTTCAAATCTACTTCATT+TGG | + | chr7_3:66106086-66106105 | None:intergenic | 20.0% |
| !! | GATATATAAGAACAAAACAA+AGG | + | chr7_3:66107368-66107387 | None:intergenic | 20.0% |
| !! | GAGAAAATTTAATGACTAAA+AGG | - | chr7_3:66107416-66107435 | Msa1117660:intron | 20.0% |
| !!! | TGTTATTTTTGGTATATTTC+AGG | - | chr7_3:66107466-66107485 | Msa1117660:intron | 20.0% |
| !! | AGAACAATTGAAAGAAATTA+GGG | + | chr7_3:66107606-66107625 | None:intergenic | 20.0% |
| !! | ATTTCAAATCTACTTCATTT+GGG | + | chr7_3:66106085-66106104 | None:intergenic | 20.0% |
| !! | AATTTCAAATCTACTTCATT+TGG | + | chr7_3:66106086-66106105 | None:intergenic | 20.0% |
| !! | GATATATAAGAACAAAACAA+AGG | + | chr7_3:66107368-66107387 | None:intergenic | 20.0% |
| !! | GAGAAAATTTAATGACTAAA+AGG | - | chr7_3:66107416-66107435 | Msa1117660:intron | 20.0% |
| !!! | TGTTATTTTTGGTATATTTC+AGG | - | chr7_3:66107466-66107485 | Msa1117660:intron | 20.0% |
| !! | AGAACAATTGAAAGAAATTA+GGG | + | chr7_3:66107606-66107625 | None:intergenic | 20.0% |
| ! | TCTCATGTAGAAAAAAGTAA+CGG | - | chr7_3:66106049-66106068 | Msa1117660:intron | 25.0% |
| !! | ATTGACCATACAAATTTTCT+TGG | - | chr7_3:66106376-66106395 | Msa1117660:intron | 25.0% |
| !! | TTGACCATACAAATTTTCTT+GGG | - | chr7_3:66106377-66106396 | Msa1117660:intron | 25.0% |
| ! | ATCATTCCTAGAATAGATAT+TGG | + | chr7_3:66106420-66106439 | None:intergenic | 25.0% |
| !! | ATTTTCTATTAGAACCTTAG+AGG | - | chr7_3:66106624-66106643 | Msa1117660:CDS | 25.0% |
| ! | ATTTCCATTTCACTGAAATT+TGG | - | chr7_3:66106748-66106767 | Msa1117660:intron | 25.0% |
| ! | TTTCCATTTCACTGAAATTT+GGG | - | chr7_3:66106749-66106768 | Msa1117660:intron | 25.0% |
| !!! | TTTTTTCTCTTCATGTATTG+TGG | - | chr7_3:66106831-66106850 | Msa1117660:intron | 25.0% |
| ! | AAAAAGGGATTATTACAGAA+TGG | - | chr7_3:66107338-66107357 | Msa1117660:intron | 25.0% |
| ! | CAAAAATAACACATCAACAA+CGG | + | chr7_3:66107457-66107476 | None:intergenic | 25.0% |
| !!! | TGTCCTTTTTTTGATTCATT+AGG | - | chr7_3:66107539-66107558 | Msa1117660:intron | 25.0% |
| ! | CTTCCTAATGAATCAAAAAA+AGG | + | chr7_3:66107545-66107564 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGATTCATTAGGA+AGG | - | chr7_3:66107543-66107562 | Msa1117660:intron | 25.0% |
| ! | CAGAACAATTGAAAGAAATT+AGG | + | chr7_3:66107607-66107626 | None:intergenic | 25.0% |
| !!! | TCCTTAGTTTTTGTTCTTAT+AGG | - | chr7_3:66107731-66107750 | Msa1117660:intron | 25.0% |
| ! | ACCTATAAGAACAAAAACTA+AGG | + | chr7_3:66107735-66107754 | None:intergenic | 25.0% |
| ! | TCTCATGTAGAAAAAAGTAA+CGG | - | chr7_3:66106049-66106068 | Msa1117660:intron | 25.0% |
| !! | ATTGACCATACAAATTTTCT+TGG | - | chr7_3:66106376-66106395 | Msa1117660:intron | 25.0% |
| !! | TTGACCATACAAATTTTCTT+GGG | - | chr7_3:66106377-66106396 | Msa1117660:intron | 25.0% |
| ! | ATCATTCCTAGAATAGATAT+TGG | + | chr7_3:66106420-66106439 | None:intergenic | 25.0% |
| !! | ATTTTCTATTAGAACCTTAG+AGG | - | chr7_3:66106624-66106643 | Msa1117660:CDS | 25.0% |
| ! | ATTTCCATTTCACTGAAATT+TGG | - | chr7_3:66106748-66106767 | Msa1117660:intron | 25.0% |
| ! | TTTCCATTTCACTGAAATTT+GGG | - | chr7_3:66106749-66106768 | Msa1117660:intron | 25.0% |
| !!! | TTTTTTCTCTTCATGTATTG+TGG | - | chr7_3:66106831-66106850 | Msa1117660:intron | 25.0% |
| ! | AAAAAGGGATTATTACAGAA+TGG | - | chr7_3:66107338-66107357 | Msa1117660:intron | 25.0% |
| ! | CAAAAATAACACATCAACAA+CGG | + | chr7_3:66107457-66107476 | None:intergenic | 25.0% |
| !!! | TGTCCTTTTTTTGATTCATT+AGG | - | chr7_3:66107539-66107558 | Msa1117660:intron | 25.0% |
| ! | CTTCCTAATGAATCAAAAAA+AGG | + | chr7_3:66107545-66107564 | None:intergenic | 25.0% |
| !!! | CTTTTTTTGATTCATTAGGA+AGG | - | chr7_3:66107543-66107562 | Msa1117660:intron | 25.0% |
| ! | CAGAACAATTGAAAGAAATT+AGG | + | chr7_3:66107607-66107626 | None:intergenic | 25.0% |
| !!! | TCCTTAGTTTTTGTTCTTAT+AGG | - | chr7_3:66107731-66107750 | Msa1117660:intron | 25.0% |
| ! | ACCTATAAGAACAAAAACTA+AGG | + | chr7_3:66107735-66107754 | None:intergenic | 25.0% |
| CTCAAATGAAGAACATTACA+TGG | - | chr7_3:66105925-66105944 | Msa1117660:intron | 30.0% | |
| !!! | GTTACTTTTTTCTACATGAG+AGG | + | chr7_3:66106050-66106069 | None:intergenic | 30.0% |
| ! | GAAGTAGATTTGAAATTGTG+AGG | - | chr7_3:66106089-66106108 | Msa1117660:intron | 30.0% |
| ! | TAGATTTGAAATTGTGAGGA+GGG | - | chr7_3:66106093-66106112 | Msa1117660:intron | 30.0% |
| TCGTCTAATTCACAACAATT+GGG | - | chr7_3:66106176-66106195 | Msa1117660:intron | 30.0% | |
| ! | TGACCATACAAATTTTCTTG+GGG | - | chr7_3:66106378-66106397 | Msa1117660:intron | 30.0% |
| !! | GGTTTCTAGTTAGTTAGAAT+AGG | - | chr7_3:66106551-66106570 | Msa1117660:intron | 30.0% |
| GTTAGTTAGAATAGGAAACA+TGG | - | chr7_3:66106559-66106578 | Msa1117660:CDS | 30.0% | |
| AGAATAGGAAACATGGTTAA+AGG | - | chr7_3:66106566-66106585 | Msa1117660:CDS | 30.0% | |
| TCACATTGTCATAAAACACT+CGG | + | chr7_3:66106787-66106806 | None:intergenic | 30.0% | |
| !! | AAACAAGTATGAAAGTGTTG+AGG | + | chr7_3:66106814-66106833 | None:intergenic | 30.0% |
| GACTGAGTTATTAATGTTCA+AGG | - | chr7_3:66106853-66106872 | Msa1117660:intron | 30.0% | |
| ! | AAGGTGTTATATGAGATGAA+TGG | - | chr7_3:66106872-66106891 | Msa1117660:intron | 30.0% |
| ! | TATGATGTTAGAGTGTTCAT+AGG | + | chr7_3:66107011-66107030 | None:intergenic | 30.0% |
| TCTAACATCATATGTTTGCT+GGG | - | chr7_3:66107019-66107038 | Msa1117660:intron | 30.0% | |
| AGTTTAATTGGATTGTTGTC+AGG | - | chr7_3:66107048-66107067 | Msa1117660:intron | 30.0% | |
| AAACACATATATCCAAACTG+AGG | + | chr7_3:66107120-66107139 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTTTCCTGTCTTT+GGG | - | chr7_3:66107142-66107161 | Msa1117660:intron | 30.0% |
| ! | TTTTCTTTTTCCTGTCTTTG+GGG | - | chr7_3:66107143-66107162 | Msa1117660:intron | 30.0% |
| !!! | CGTTGTTGATGTGTTATTTT+TGG | - | chr7_3:66107455-66107474 | Msa1117660:intron | 30.0% |
| ATTTCTCAATTCTCACAAGT+AGG | - | chr7_3:66107682-66107701 | Msa1117660:intron | 30.0% | |
| CTCAAATGAAGAACATTACA+TGG | - | chr7_3:66105925-66105944 | Msa1117660:intron | 30.0% | |
| !!! | GTTACTTTTTTCTACATGAG+AGG | + | chr7_3:66106050-66106069 | None:intergenic | 30.0% |
| ! | GAAGTAGATTTGAAATTGTG+AGG | - | chr7_3:66106089-66106108 | Msa1117660:intron | 30.0% |
| ! | TAGATTTGAAATTGTGAGGA+GGG | - | chr7_3:66106093-66106112 | Msa1117660:intron | 30.0% |
| TCGTCTAATTCACAACAATT+GGG | - | chr7_3:66106176-66106195 | Msa1117660:intron | 30.0% | |
| ! | TGACCATACAAATTTTCTTG+GGG | - | chr7_3:66106378-66106397 | Msa1117660:intron | 30.0% |
| !! | GGTTTCTAGTTAGTTAGAAT+AGG | - | chr7_3:66106551-66106570 | Msa1117660:intron | 30.0% |
| GTTAGTTAGAATAGGAAACA+TGG | - | chr7_3:66106559-66106578 | Msa1117660:CDS | 30.0% | |
| AGAATAGGAAACATGGTTAA+AGG | - | chr7_3:66106566-66106585 | Msa1117660:CDS | 30.0% | |
| TCACATTGTCATAAAACACT+CGG | + | chr7_3:66106787-66106806 | None:intergenic | 30.0% | |
| !! | AAACAAGTATGAAAGTGTTG+AGG | + | chr7_3:66106814-66106833 | None:intergenic | 30.0% |
| GACTGAGTTATTAATGTTCA+AGG | - | chr7_3:66106853-66106872 | Msa1117660:intron | 30.0% | |
| ! | AAGGTGTTATATGAGATGAA+TGG | - | chr7_3:66106872-66106891 | Msa1117660:intron | 30.0% |
| ! | TATGATGTTAGAGTGTTCAT+AGG | + | chr7_3:66107011-66107030 | None:intergenic | 30.0% |
| TCTAACATCATATGTTTGCT+GGG | - | chr7_3:66107019-66107038 | Msa1117660:intron | 30.0% | |
| AGTTTAATTGGATTGTTGTC+AGG | - | chr7_3:66107048-66107067 | Msa1117660:intron | 30.0% | |
| AAACACATATATCCAAACTG+AGG | + | chr7_3:66107120-66107139 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTTTCCTGTCTTT+GGG | - | chr7_3:66107142-66107161 | Msa1117660:intron | 30.0% |
| ! | TTTTCTTTTTCCTGTCTTTG+GGG | - | chr7_3:66107143-66107162 | Msa1117660:intron | 30.0% |
| !!! | CGTTGTTGATGTGTTATTTT+TGG | - | chr7_3:66107455-66107474 | Msa1117660:intron | 30.0% |
| ATTTCTCAATTCTCACAAGT+AGG | - | chr7_3:66107682-66107701 | Msa1117660:intron | 30.0% | |
| TCAAATCTACTTCATTTGGG+TGG | + | chr7_3:66106082-66106101 | None:intergenic | 35.0% | |
| ! | GTAGATTTGAAATTGTGAGG+AGG | - | chr7_3:66106092-66106111 | Msa1117660:intron | 35.0% |
| CTCGTCTAATTCACAACAAT+TGG | - | chr7_3:66106175-66106194 | Msa1117660:intron | 35.0% | |
| TTCACAACAATTGGGATCTT+AGG | - | chr7_3:66106184-66106203 | Msa1117660:intron | 35.0% | |
| TCACAACAATTGGGATCTTA+GGG | - | chr7_3:66106185-66106204 | Msa1117660:intron | 35.0% | |
| AGTAGTTGAAAATCAGGCTT+TGG | + | chr7_3:66106212-66106231 | None:intergenic | 35.0% | |
| TGCAGTAGTAGTTGAAAATC+AGG | + | chr7_3:66106218-66106237 | None:intergenic | 35.0% | |
| ! | ATTTTCAACTACTACTGCAC+AGG | - | chr7_3:66106219-66106238 | Msa1117660:intron | 35.0% |
| ! | TTTTCAACTACTACTGCACA+GGG | - | chr7_3:66106220-66106239 | Msa1117660:intron | 35.0% |
| ! | ACATGAGGTTTTTAACCGTT+TGG | - | chr7_3:66106274-66106293 | Msa1117660:intron | 35.0% |
| ! | CATGAGGTTTTTAACCGTTT+GGG | - | chr7_3:66106275-66106294 | Msa1117660:intron | 35.0% |
| ! | ATGAGGTTTTTAACCGTTTG+GGG | - | chr7_3:66106276-66106295 | Msa1117660:intron | 35.0% |
| ATTGCAATACAAACCCCAAA+CGG | + | chr7_3:66106292-66106311 | None:intergenic | 35.0% | |
| ! | GACCATACAAATTTTCTTGG+GGG | - | chr7_3:66106379-66106398 | Msa1117660:intron | 35.0% |
| TTCCCCCAAGAAAATTTGTA+TGG | + | chr7_3:66106384-66106403 | None:intergenic | 35.0% | |
| ! | ATTTTCTTGGGGGAATATCA+AGG | - | chr7_3:66106389-66106408 | Msa1117660:intron | 35.0% |
| GCTACTCCAATATCTATTCT+AGG | - | chr7_3:66106411-66106430 | Msa1117660:intron | 35.0% | |
| TCTATTAGAACCTTAGAGGT+TGG | - | chr7_3:66106628-66106647 | Msa1117660:CDS | 35.0% | |
| CTATTAGAACCTTAGAGGTT+GGG | - | chr7_3:66106629-66106648 | Msa1117660:CDS | 35.0% | |
| AGCATTAACTCAGGGATTAT+AGG | - | chr7_3:66106679-66106698 | Msa1117660:intron | 35.0% | |
| GCATTAACTCAGGGATTATA+GGG | - | chr7_3:66106680-66106699 | Msa1117660:intron | 35.0% | |
| CATTAACTCAGGGATTATAG+GGG | - | chr7_3:66106681-66106700 | Msa1117660:intron | 35.0% | |
| GAACCCAAATTTCAGTGAAA+TGG | + | chr7_3:66106755-66106774 | None:intergenic | 35.0% | |
| GTGTTATATGAGATGAATGG+TGG | - | chr7_3:66106875-66106894 | Msa1117660:intron | 35.0% | |
| !! | GGTTTTCTAATGACTAGTTG+TGG | - | chr7_3:66106896-66106915 | Msa1117660:intron | 35.0% |
| ! | TGTTTTCAGCATTGTGAAGA+AGG | - | chr7_3:66106980-66106999 | Msa1117660:intron | 35.0% |
| CTCTAACATCATATGTTTGC+TGG | - | chr7_3:66107018-66107037 | Msa1117660:intron | 35.0% | |
| !!! | GCTGGGTTTTTGAGTTTAAT+TGG | - | chr7_3:66107036-66107055 | Msa1117660:intron | 35.0% |
| TTAATTGGATTGTTGTCAGG+TGG | - | chr7_3:66107051-66107070 | Msa1117660:intron | 35.0% | |
| CCAAAGACAGGAAAAAGAAA+AGG | + | chr7_3:66107144-66107163 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTTTTCCTGTCTT+TGG | - | chr7_3:66107141-66107160 | Msa1117660:intron | 35.0% |
| CTACTTTGACTACTCTTTCT+CGG | + | chr7_3:66107203-66107222 | None:intergenic | 35.0% | |
| CATCAACAACGGCTAATTAT+GGG | + | chr7_3:66107446-66107465 | None:intergenic | 35.0% | |
| ACATCAACAACGGCTAATTA+TGG | + | chr7_3:66107447-66107466 | None:intergenic | 35.0% | |
| GAATCAAAAAAAGGACAGCA+CGG | + | chr7_3:66107536-66107555 | None:intergenic | 35.0% | |
| TCAAATCTACTTCATTTGGG+TGG | + | chr7_3:66106082-66106101 | None:intergenic | 35.0% | |
| ! | GTAGATTTGAAATTGTGAGG+AGG | - | chr7_3:66106092-66106111 | Msa1117660:intron | 35.0% |
| CTCGTCTAATTCACAACAAT+TGG | - | chr7_3:66106175-66106194 | Msa1117660:intron | 35.0% | |
| TTCACAACAATTGGGATCTT+AGG | - | chr7_3:66106184-66106203 | Msa1117660:intron | 35.0% | |
| TCACAACAATTGGGATCTTA+GGG | - | chr7_3:66106185-66106204 | Msa1117660:intron | 35.0% | |
| AGTAGTTGAAAATCAGGCTT+TGG | + | chr7_3:66106212-66106231 | None:intergenic | 35.0% | |
| TGCAGTAGTAGTTGAAAATC+AGG | + | chr7_3:66106218-66106237 | None:intergenic | 35.0% | |
| ! | ATTTTCAACTACTACTGCAC+AGG | - | chr7_3:66106219-66106238 | Msa1117660:intron | 35.0% |
| ! | TTTTCAACTACTACTGCACA+GGG | - | chr7_3:66106220-66106239 | Msa1117660:intron | 35.0% |
| ! | ACATGAGGTTTTTAACCGTT+TGG | - | chr7_3:66106274-66106293 | Msa1117660:intron | 35.0% |
| ! | CATGAGGTTTTTAACCGTTT+GGG | - | chr7_3:66106275-66106294 | Msa1117660:intron | 35.0% |
| ! | ATGAGGTTTTTAACCGTTTG+GGG | - | chr7_3:66106276-66106295 | Msa1117660:intron | 35.0% |
| ATTGCAATACAAACCCCAAA+CGG | + | chr7_3:66106292-66106311 | None:intergenic | 35.0% | |
| ! | GACCATACAAATTTTCTTGG+GGG | - | chr7_3:66106379-66106398 | Msa1117660:intron | 35.0% |
| TTCCCCCAAGAAAATTTGTA+TGG | + | chr7_3:66106384-66106403 | None:intergenic | 35.0% | |
| ! | ATTTTCTTGGGGGAATATCA+AGG | - | chr7_3:66106389-66106408 | Msa1117660:intron | 35.0% |
| GCTACTCCAATATCTATTCT+AGG | - | chr7_3:66106411-66106430 | Msa1117660:intron | 35.0% | |
| TCTATTAGAACCTTAGAGGT+TGG | - | chr7_3:66106628-66106647 | Msa1117660:CDS | 35.0% | |
| CTATTAGAACCTTAGAGGTT+GGG | - | chr7_3:66106629-66106648 | Msa1117660:CDS | 35.0% | |
| AGCATTAACTCAGGGATTAT+AGG | - | chr7_3:66106679-66106698 | Msa1117660:intron | 35.0% | |
| GCATTAACTCAGGGATTATA+GGG | - | chr7_3:66106680-66106699 | Msa1117660:intron | 35.0% | |
| CATTAACTCAGGGATTATAG+GGG | - | chr7_3:66106681-66106700 | Msa1117660:intron | 35.0% | |
| GAACCCAAATTTCAGTGAAA+TGG | + | chr7_3:66106755-66106774 | None:intergenic | 35.0% | |
| GTGTTATATGAGATGAATGG+TGG | - | chr7_3:66106875-66106894 | Msa1117660:intron | 35.0% | |
| !! | GGTTTTCTAATGACTAGTTG+TGG | - | chr7_3:66106896-66106915 | Msa1117660:intron | 35.0% |
| ! | TGTTTTCAGCATTGTGAAGA+AGG | - | chr7_3:66106980-66106999 | Msa1117660:intron | 35.0% |
| CTCTAACATCATATGTTTGC+TGG | - | chr7_3:66107018-66107037 | Msa1117660:intron | 35.0% | |
| !!! | GCTGGGTTTTTGAGTTTAAT+TGG | - | chr7_3:66107036-66107055 | Msa1117660:intron | 35.0% |
| TTAATTGGATTGTTGTCAGG+TGG | - | chr7_3:66107051-66107070 | Msa1117660:intron | 35.0% | |
| CCAAAGACAGGAAAAAGAAA+AGG | + | chr7_3:66107144-66107163 | None:intergenic | 35.0% | |
| ! | CCTTTTCTTTTTCCTGTCTT+TGG | - | chr7_3:66107141-66107160 | Msa1117660:intron | 35.0% |
| CTACTTTGACTACTCTTTCT+CGG | + | chr7_3:66107203-66107222 | None:intergenic | 35.0% | |
| CATCAACAACGGCTAATTAT+GGG | + | chr7_3:66107446-66107465 | None:intergenic | 35.0% | |
| ACATCAACAACGGCTAATTA+TGG | + | chr7_3:66107447-66107466 | None:intergenic | 35.0% | |
| GAATCAAAAAAAGGACAGCA+CGG | + | chr7_3:66107536-66107555 | None:intergenic | 35.0% | |
| ATCTACTTCATTTGGGTGGT+AGG | + | chr7_3:66106078-66106097 | None:intergenic | 40.0% | |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr7_3:66106128-66106147 | Msa1117660:intron | 40.0% |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr7_3:66106129-66106148 | Msa1117660:intron | 40.0% |
| TAAGTGGGGAATTGTGAGAA+GGG | - | chr7_3:66106143-66106162 | Msa1117660:intron | 40.0% | |
| AATTGTGAGAAGGGTTCAGA+TGG | - | chr7_3:66106152-66106171 | Msa1117660:intron | 40.0% | |
| CACAACAATTGGGATCTTAG+GGG | - | chr7_3:66106186-66106205 | Msa1117660:intron | 40.0% | |
| ! | GTTTGGGGTTTGTATTGCAA+TGG | - | chr7_3:66106291-66106310 | Msa1117660:intron | 40.0% |
| ATTGCAATGGTGTTCTGACT+TGG | - | chr7_3:66106304-66106323 | Msa1117660:intron | 40.0% | |
| AGTTTCCTTATCTCAGCCTT+AGG | - | chr7_3:66106456-66106475 | Msa1117660:intron | 40.0% | |
| TTATCTCAGCCTTAGGAACA+GGG | - | chr7_3:66106463-66106482 | Msa1117660:intron | 40.0% | |
| TTGTGCCTTAACTCAACAGA+TGG | - | chr7_3:66106523-66106542 | Msa1117660:intron | 40.0% | |
| TGTGCCTTAACTCAACAGAT+GGG | - | chr7_3:66106524-66106543 | Msa1117660:intron | 40.0% | |
| GAAACATGGTTAAAGGCAGA+GGG | - | chr7_3:66106573-66106592 | Msa1117660:CDS | 40.0% | |
| GAGAGAACAATCTCTATCTG+AGG | - | chr7_3:66106656-66106675 | Msa1117660:CDS | 40.0% | |
| !! | TATCTGAGGAGCATTAACTC+AGG | - | chr7_3:66106670-66106689 | Msa1117660:intron | 40.0% |
| !! | ATCTGAGGAGCATTAACTCA+GGG | - | chr7_3:66106671-66106690 | Msa1117660:intron | 40.0% |
| TCGTTGCTAGAACTCTATGT+TGG | - | chr7_3:66106921-66106940 | Msa1117660:intron | 40.0% | |
| TTGCTAGAACTCTATGTTGG+AGG | - | chr7_3:66106924-66106943 | Msa1117660:intron | 40.0% | |
| TACTGGTAAGAACCTCAGTT+TGG | - | chr7_3:66107105-66107124 | Msa1117660:intron | 40.0% | |
| CTGTTTACAATGCTCAGAGA+AGG | + | chr7_3:66107294-66107313 | None:intergenic | 40.0% | |
| CAATTGTTCTGCCGAAATTC+AGG | - | chr7_3:66107616-66107635 | Msa1117660:CDS | 40.0% | |
| GAACAACTCCACCTGAATTT+CGG | + | chr7_3:66107630-66107649 | None:intergenic | 40.0% | |
| ATCTACTTCATTTGGGTGGT+AGG | + | chr7_3:66106078-66106097 | None:intergenic | 40.0% | |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr7_3:66106128-66106147 | Msa1117660:intron | 40.0% |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr7_3:66106129-66106148 | Msa1117660:intron | 40.0% |
| TAAGTGGGGAATTGTGAGAA+GGG | - | chr7_3:66106143-66106162 | Msa1117660:intron | 40.0% | |
| AATTGTGAGAAGGGTTCAGA+TGG | - | chr7_3:66106152-66106171 | Msa1117660:intron | 40.0% | |
| CACAACAATTGGGATCTTAG+GGG | - | chr7_3:66106186-66106205 | Msa1117660:intron | 40.0% | |
| ! | GTTTGGGGTTTGTATTGCAA+TGG | - | chr7_3:66106291-66106310 | Msa1117660:intron | 40.0% |
| ATTGCAATGGTGTTCTGACT+TGG | - | chr7_3:66106304-66106323 | Msa1117660:intron | 40.0% | |
| AGTTTCCTTATCTCAGCCTT+AGG | - | chr7_3:66106456-66106475 | Msa1117660:intron | 40.0% | |
| TTATCTCAGCCTTAGGAACA+GGG | - | chr7_3:66106463-66106482 | Msa1117660:intron | 40.0% | |
| TTGTGCCTTAACTCAACAGA+TGG | - | chr7_3:66106523-66106542 | Msa1117660:intron | 40.0% | |
| TGTGCCTTAACTCAACAGAT+GGG | - | chr7_3:66106524-66106543 | Msa1117660:intron | 40.0% | |
| GAAACATGGTTAAAGGCAGA+GGG | - | chr7_3:66106573-66106592 | Msa1117660:CDS | 40.0% | |
| GAGAGAACAATCTCTATCTG+AGG | - | chr7_3:66106656-66106675 | Msa1117660:CDS | 40.0% | |
| !! | TATCTGAGGAGCATTAACTC+AGG | - | chr7_3:66106670-66106689 | Msa1117660:intron | 40.0% |
| !! | ATCTGAGGAGCATTAACTCA+GGG | - | chr7_3:66106671-66106690 | Msa1117660:intron | 40.0% |
| TCGTTGCTAGAACTCTATGT+TGG | - | chr7_3:66106921-66106940 | Msa1117660:intron | 40.0% | |
| TTGCTAGAACTCTATGTTGG+AGG | - | chr7_3:66106924-66106943 | Msa1117660:intron | 40.0% | |
| TACTGGTAAGAACCTCAGTT+TGG | - | chr7_3:66107105-66107124 | Msa1117660:intron | 40.0% | |
| CTGTTTACAATGCTCAGAGA+AGG | + | chr7_3:66107294-66107313 | None:intergenic | 40.0% | |
| CAATTGTTCTGCCGAAATTC+AGG | - | chr7_3:66107616-66107635 | Msa1117660:CDS | 40.0% | |
| GAACAACTCCACCTGAATTT+CGG | + | chr7_3:66107630-66107649 | None:intergenic | 40.0% | |
| CCACTTAGTGGGATAAGACT+TGG | + | chr7_3:66106130-66106149 | None:intergenic | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr7_3:66106127-66106146 | Msa1117660:intron | 45.0% |
| CTCACAATTCCCCACTTAGT+GGG | + | chr7_3:66106141-66106160 | None:intergenic | 45.0% | |
| TCTCACAATTCCCCACTTAG+TGG | + | chr7_3:66106142-66106161 | None:intergenic | 45.0% | |
| CTAAGTGGGGAATTGTGAGA+AGG | - | chr7_3:66106142-66106161 | Msa1117660:intron | 45.0% | |
| GAGAGAGTTCTTGGGAGATT+TGG | - | chr7_3:66106242-66106261 | Msa1117660:intron | 45.0% | |
| AGAGTTCTTGGGAGATTTGG+TGG | - | chr7_3:66106245-66106264 | Msa1117660:intron | 45.0% | |
| !! | TTCTTGGGAGATTTGGTGGT+TGG | - | chr7_3:66106249-66106268 | Msa1117660:intron | 45.0% |
| ! | ATTTGGTGGTTGGACACATG+AGG | - | chr7_3:66106259-66106278 | Msa1117660:intron | 45.0% |
| TGCTGCTACAACGAACAGTA+GGG | + | chr7_3:66106342-66106361 | None:intergenic | 45.0% | |
| CTGTTCCTAAGGCTGAGATA+AGG | + | chr7_3:66106464-66106483 | None:intergenic | 45.0% | |
| CTTATCTCAGCCTTAGGAAC+AGG | - | chr7_3:66106462-66106481 | Msa1117660:intron | 45.0% | |
| AGAAAACAGCCCTGTTCCTA+AGG | + | chr7_3:66106475-66106494 | None:intergenic | 45.0% | |
| TCAGCCCATCTGTTGAGTTA+AGG | + | chr7_3:66106531-66106550 | None:intergenic | 45.0% | |
| !! | TTAACTCAACAGATGGGCTG+AGG | - | chr7_3:66106530-66106549 | Msa1117660:intron | 45.0% |
| GGAAACATGGTTAAAGGCAG+AGG | - | chr7_3:66106572-66106591 | Msa1117660:CDS | 45.0% | |
| ATGGTTAAAGGCAGAGGGAA+GGG | - | chr7_3:66106578-66106597 | Msa1117660:CDS | 45.0% | |
| TTCTTACCAGTAGAGACGAG+GGG | + | chr7_3:66107097-66107116 | None:intergenic | 45.0% | |
| GTTCTTACCAGTAGAGACGA+GGG | + | chr7_3:66107098-66107117 | None:intergenic | 45.0% | |
| CAACAACGGCTAATTATGGG+TGG | + | chr7_3:66107443-66107462 | None:intergenic | 45.0% | |
| ! | GTGCTATTAAGCTTCCATCG+TGG | + | chr7_3:66107514-66107533 | None:intergenic | 45.0% |
| TTGTTCTGCCGAAATTCAGG+TGG | - | chr7_3:66107619-66107638 | Msa1117660:CDS | 45.0% | |
| CCACTTAGTGGGATAAGACT+TGG | + | chr7_3:66106130-66106149 | None:intergenic | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr7_3:66106127-66106146 | Msa1117660:intron | 45.0% |
| CTCACAATTCCCCACTTAGT+GGG | + | chr7_3:66106141-66106160 | None:intergenic | 45.0% | |
| TCTCACAATTCCCCACTTAG+TGG | + | chr7_3:66106142-66106161 | None:intergenic | 45.0% | |
| CTAAGTGGGGAATTGTGAGA+AGG | - | chr7_3:66106142-66106161 | Msa1117660:intron | 45.0% | |
| GAGAGAGTTCTTGGGAGATT+TGG | - | chr7_3:66106242-66106261 | Msa1117660:intron | 45.0% | |
| AGAGTTCTTGGGAGATTTGG+TGG | - | chr7_3:66106245-66106264 | Msa1117660:intron | 45.0% | |
| !! | TTCTTGGGAGATTTGGTGGT+TGG | - | chr7_3:66106249-66106268 | Msa1117660:intron | 45.0% |
| ! | ATTTGGTGGTTGGACACATG+AGG | - | chr7_3:66106259-66106278 | Msa1117660:intron | 45.0% |
| TGCTGCTACAACGAACAGTA+GGG | + | chr7_3:66106342-66106361 | None:intergenic | 45.0% | |
| CTGTTCCTAAGGCTGAGATA+AGG | + | chr7_3:66106464-66106483 | None:intergenic | 45.0% | |
| CTTATCTCAGCCTTAGGAAC+AGG | - | chr7_3:66106462-66106481 | Msa1117660:intron | 45.0% | |
| AGAAAACAGCCCTGTTCCTA+AGG | + | chr7_3:66106475-66106494 | None:intergenic | 45.0% | |
| TCAGCCCATCTGTTGAGTTA+AGG | + | chr7_3:66106531-66106550 | None:intergenic | 45.0% | |
| !! | TTAACTCAACAGATGGGCTG+AGG | - | chr7_3:66106530-66106549 | Msa1117660:intron | 45.0% |
| GGAAACATGGTTAAAGGCAG+AGG | - | chr7_3:66106572-66106591 | Msa1117660:CDS | 45.0% | |
| ATGGTTAAAGGCAGAGGGAA+GGG | - | chr7_3:66106578-66106597 | Msa1117660:CDS | 45.0% | |
| TTCTTACCAGTAGAGACGAG+GGG | + | chr7_3:66107097-66107116 | None:intergenic | 45.0% | |
| GTTCTTACCAGTAGAGACGA+GGG | + | chr7_3:66107098-66107117 | None:intergenic | 45.0% | |
| CAACAACGGCTAATTATGGG+TGG | + | chr7_3:66107443-66107462 | None:intergenic | 45.0% | |
| ! | GTGCTATTAAGCTTCCATCG+TGG | + | chr7_3:66107514-66107533 | None:intergenic | 45.0% |
| TTGTTCTGCCGAAATTCAGG+TGG | - | chr7_3:66107619-66107638 | Msa1117660:CDS | 45.0% | |
| !! | ACATGGTGTTGTTGTGCTGC+TGG | - | chr7_3:66105942-66105961 | Msa1117660:intron | 50.0% |
| !! | CATGGTGTTGTTGTGCTGCT+GGG | - | chr7_3:66105943-66105962 | Msa1117660:intron | 50.0% |
| TGCACAGGGAGAGAGTTCTT+GGG | - | chr7_3:66106234-66106253 | Msa1117660:intron | 50.0% | |
| CGAACAGTAGGGAAGCAACA+AGG | + | chr7_3:66106331-66106350 | None:intergenic | 50.0% | |
| CTGCTGCTACAACGAACAGT+AGG | + | chr7_3:66106343-66106362 | None:intergenic | 50.0% | |
| !! | GGAACAGGGCTGTTTTCTAG+CGG | - | chr7_3:66106477-66106496 | Msa1117660:intron | 50.0% |
| TTCTAGCGGCAGGTAGTGTT+AGG | - | chr7_3:66106491-66106510 | Msa1117660:intron | 50.0% | |
| GGCAGGTAGTGTTAGGATAC+TGG | - | chr7_3:66106498-66106517 | Msa1117660:intron | 50.0% | |
| CATGGTTAAAGGCAGAGGGA+AGG | - | chr7_3:66106577-66106596 | Msa1117660:CDS | 50.0% | |
| AGAGGGAAGGGCAATCAGTA+TGG | - | chr7_3:66106590-66106609 | Msa1117660:CDS | 50.0% | |
| GAGGGAAGGGCAATCAGTAT+GGG | - | chr7_3:66106591-66106610 | Msa1117660:CDS | 50.0% | |
| TCTTACCAGTAGAGACGAGG+GGG | + | chr7_3:66107096-66107115 | None:intergenic | 50.0% | |
| GGTTCTTACCAGTAGAGACG+AGG | + | chr7_3:66107099-66107118 | None:intergenic | 50.0% | |
| ! | TTCCTGTCTTTGGGGACAGT+TGG | - | chr7_3:66107151-66107170 | Msa1117660:intron | 50.0% |
| ! | TCCTGTCTTTGGGGACAGTT+GGG | - | chr7_3:66107152-66107171 | Msa1117660:intron | 50.0% |
| !! | TTTCAGGTTCGACCCTTTCC+TGG | - | chr7_3:66107482-66107501 | Msa1117660:intron | 50.0% |
| TCGTGGCATTGTCCAGGAAA+GGG | + | chr7_3:66107497-66107516 | None:intergenic | 50.0% | |
| ATCGTGGCATTGTCCAGGAA+AGG | + | chr7_3:66107498-66107517 | None:intergenic | 50.0% | |
| TTTCCTGGACAATGCCACGA+TGG | - | chr7_3:66107497-66107516 | Msa1117660:intron | 50.0% | |
| !! | ACATGGTGTTGTTGTGCTGC+TGG | - | chr7_3:66105942-66105961 | Msa1117660:intron | 50.0% |
| !! | CATGGTGTTGTTGTGCTGCT+GGG | - | chr7_3:66105943-66105962 | Msa1117660:intron | 50.0% |
| TGCACAGGGAGAGAGTTCTT+GGG | - | chr7_3:66106234-66106253 | Msa1117660:intron | 50.0% | |
| CGAACAGTAGGGAAGCAACA+AGG | + | chr7_3:66106331-66106350 | None:intergenic | 50.0% | |
| CTGCTGCTACAACGAACAGT+AGG | + | chr7_3:66106343-66106362 | None:intergenic | 50.0% | |
| !! | GGAACAGGGCTGTTTTCTAG+CGG | - | chr7_3:66106477-66106496 | Msa1117660:intron | 50.0% |
| TTCTAGCGGCAGGTAGTGTT+AGG | - | chr7_3:66106491-66106510 | Msa1117660:intron | 50.0% | |
| GGCAGGTAGTGTTAGGATAC+TGG | - | chr7_3:66106498-66106517 | Msa1117660:intron | 50.0% | |
| CATGGTTAAAGGCAGAGGGA+AGG | - | chr7_3:66106577-66106596 | Msa1117660:CDS | 50.0% | |
| AGAGGGAAGGGCAATCAGTA+TGG | - | chr7_3:66106590-66106609 | Msa1117660:CDS | 50.0% | |
| GAGGGAAGGGCAATCAGTAT+GGG | - | chr7_3:66106591-66106610 | Msa1117660:CDS | 50.0% | |
| TCTTACCAGTAGAGACGAGG+GGG | + | chr7_3:66107096-66107115 | None:intergenic | 50.0% | |
| GGTTCTTACCAGTAGAGACG+AGG | + | chr7_3:66107099-66107118 | None:intergenic | 50.0% | |
| ! | TTCCTGTCTTTGGGGACAGT+TGG | - | chr7_3:66107151-66107170 | Msa1117660:intron | 50.0% |
| ! | TCCTGTCTTTGGGGACAGTT+GGG | - | chr7_3:66107152-66107171 | Msa1117660:intron | 50.0% |
| !! | TTTCAGGTTCGACCCTTTCC+TGG | - | chr7_3:66107482-66107501 | Msa1117660:intron | 50.0% |
| TCGTGGCATTGTCCAGGAAA+GGG | + | chr7_3:66107497-66107516 | None:intergenic | 50.0% | |
| ATCGTGGCATTGTCCAGGAA+AGG | + | chr7_3:66107498-66107517 | None:intergenic | 50.0% | |
| TTTCCTGGACAATGCCACGA+TGG | - | chr7_3:66107497-66107516 | Msa1117660:intron | 50.0% | |
| CTGCACAGGGAGAGAGTTCT+TGG | - | chr7_3:66106233-66106252 | Msa1117660:intron | 55.0% | |
| CTCTCTCTGCCCAACCTCTA+AGG | + | chr7_3:66106641-66106660 | None:intergenic | 55.0% | |
| AAGATCCCCCTCGTCTCTAC+TGG | - | chr7_3:66107088-66107107 | Msa1117660:intron | 55.0% | |
| CTTCCATCGTGGCATTGTCC+AGG | + | chr7_3:66107503-66107522 | None:intergenic | 55.0% | |
| CTGCACAGGGAGAGAGTTCT+TGG | - | chr7_3:66106233-66106252 | Msa1117660:intron | 55.0% | |
| CTCTCTCTGCCCAACCTCTA+AGG | + | chr7_3:66106641-66106660 | None:intergenic | 55.0% | |
| AAGATCCCCCTCGTCTCTAC+TGG | - | chr7_3:66107088-66107107 | Msa1117660:intron | 55.0% | |
| CTTCCATCGTGGCATTGTCC+AGG | + | chr7_3:66107503-66107522 | None:intergenic | 55.0% | |
| !! | CAGGGCTGTTTTCTAGCGGC+AGG | - | chr7_3:66106481-66106500 | Msa1117660:intron | 60.0% |
| !! | GGGGATCTTCCAGAAGCGCT+TGG | + | chr7_3:66107077-66107096 | None:intergenic | 60.0% |
| GCCCAACTGTCCCCAAAGAC+AGG | + | chr7_3:66107156-66107175 | None:intergenic | 60.0% | |
| !! | CAGGGCTGTTTTCTAGCGGC+AGG | - | chr7_3:66106481-66106500 | Msa1117660:intron | 60.0% |
| !! | GGGGATCTTCCAGAAGCGCT+TGG | + | chr7_3:66107077-66107096 | None:intergenic | 60.0% |
| GCCCAACTGTCCCCAAAGAC+AGG | + | chr7_3:66107156-66107175 | None:intergenic | 60.0% | |
| GTCAGGTGGCCAAGCGCTTC+TGG | - | chr7_3:66107065-66107084 | Msa1117660:intron | 65.0% | |
| GTCAGGTGGCCAAGCGCTTC+TGG | - | chr7_3:66107065-66107084 | Msa1117660:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 66105886 | 66107782 | 66105886 | ID=Msa1117660;Name=Msa1117660 |
| chr7_3 | mRNA | 66105886 | 66107782 | 66105886 | ID=Msa1117660-mRNA-1;Parent=Msa1117660;Name=Msa1117660-mRNA-1;_AED=0.48;_eAED=0.58;_QI=0|0|0|1|0|0|4|0|71 |
| chr7_3 | exon | 66107774 | 66107782 | 66107774 | ID=Msa1117660-mRNA-1:exon:15985;Parent=Msa1117660-mRNA-1 |
| chr7_3 | exon | 66107614 | 66107669 | 66107614 | ID=Msa1117660-mRNA-1:exon:15984;Parent=Msa1117660-mRNA-1 |
| chr7_3 | exon | 66106559 | 66106679 | 66106559 | ID=Msa1117660-mRNA-1:exon:15983;Parent=Msa1117660-mRNA-1 |
| chr7_3 | exon | 66105886 | 66105915 | 66105886 | ID=Msa1117660-mRNA-1:exon:15982;Parent=Msa1117660-mRNA-1 |
| chr7_3 | CDS | 66107774 | 66107782 | 66107774 | ID=Msa1117660-mRNA-1:cds;Parent=Msa1117660-mRNA-1 |
| chr7_3 | CDS | 66107614 | 66107669 | 66107614 | ID=Msa1117660-mRNA-1:cds;Parent=Msa1117660-mRNA-1 |
| chr7_3 | CDS | 66106559 | 66106679 | 66106559 | ID=Msa1117660-mRNA-1:cds;Parent=Msa1117660-mRNA-1 |
| chr7_3 | CDS | 66105886 | 66105915 | 66105886 | ID=Msa1117660-mRNA-1:cds;Parent=Msa1117660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
