Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006390 | sp|P26563|AATM_LUPAN | 92.199 | 423 | 33 | 0 | 33 | 455 | 32 | 454 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006390 | Q40325 | 99.560 | 455 | 2 | 0 | 1 | 455 | 1 | 455 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0006390 | 0.810629 | 1.048022e-50 | -8.615850e-47 |
| Msa0006390 | Msa0006400 | 0.839088 | 1.953215e-57 | -8.615850e-47 |
| Msa0006390 | Msa0009420 | 0.806872 | 6.661104e-50 | -8.615850e-47 |
| Msa0006390 | Msa0011720 | 0.808229 | 3.431078e-50 | -8.615850e-47 |
| Msa0006390 | Msa0012530 | 0.806522 | 7.898829e-50 | -8.615850e-47 |
| Msa0006390 | Msa0015390 | 0.809008 | 2.339088e-50 | -8.615850e-47 |
| Msa0006390 | Msa0017510 | 0.837653 | 4.577198e-57 | -8.615850e-47 |
| Msa0006390 | Msa0026910 | 0.818838 | 1.590119e-52 | -8.615850e-47 |
| Msa0006390 | Msa0030180 | 0.809686 | 1.673777e-50 | -8.615850e-47 |
| Msa0006390 | Msa0032370 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0006390 | Msa0033440 | 0.800423 | 1.451604e-48 | -8.615850e-47 |
| Msa0006390 | Msa0035150 | 0.827898 | 1.213057e-54 | -8.615850e-47 |
| Msa0006390 | Msa0043560 | 0.807575 | 4.727030e-50 | -8.615850e-47 |
| Msa0006390 | Msa0046100 | 0.812348 | 4.434777e-51 | -8.615850e-47 |
| Msa0006390 | Msa0061340 | 0.825249 | 5.195662e-54 | -8.615850e-47 |
| Msa0006390 | Msa0077680 | 0.801141 | 1.035902e-48 | -8.615850e-47 |
| Msa0006390 | Msa0078060 | 0.804597 | 2.001846e-49 | -8.615850e-47 |
| Msa0006390 | Msa0090340 | 0.814749 | 1.314793e-51 | -8.615850e-47 |
| Msa0006390 | Msa0105070 | 0.809418 | 1.910931e-50 | -8.615850e-47 |
| Msa0006390 | Msa0109900 | 0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa0006390 | Msa0116770 | 0.819511 | 1.117716e-52 | -8.615850e-47 |
| Msa0006390 | Msa0122590 | 0.809854 | 1.540107e-50 | -8.615850e-47 |
| Msa0006390 | Msa0152400 | 0.819480 | 1.136353e-52 | -8.615850e-47 |
| Msa0006390 | Msa0157290 | 0.837676 | 4.516805e-57 | -8.615850e-47 |
| Msa0006390 | Msa0165210 | 0.824142 | 9.473795e-54 | -8.615850e-47 |
| Msa0006390 | Msa0173990 | 0.802793 | 4.738665e-49 | -8.615850e-47 |
| Msa0006390 | Msa0178960 | 0.818808 | 1.615846e-52 | -8.615850e-47 |
| Msa0006390 | Msa0178970 | 0.810911 | 9.109982e-51 | -8.615850e-47 |
| Msa0006390 | Msa0184020 | 0.802646 | 5.083523e-49 | -8.615850e-47 |
| Msa0006390 | Msa0201070 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0006390 | Msa0215320 | -0.819177 | 1.331640e-52 | -8.615850e-47 |
| Msa0006390 | Msa0220580 | 0.823613 | 1.260471e-53 | -8.615850e-47 |
| Msa0006390 | Msa0220740 | 0.880276 | 6.272257e-70 | -8.615850e-47 |
| Msa0006390 | Msa0223410 | -0.823129 | 1.635123e-53 | -8.615850e-47 |
| Msa0006390 | Msa0226890 | 0.807217 | 5.629106e-50 | -8.615850e-47 |
| Msa0006390 | Msa0233300 | 0.815591 | 8.548604e-52 | -8.615850e-47 |
| Msa0006390 | Msa0237310 | 0.813575 | 2.387817e-51 | -8.615850e-47 |
| Msa0006390 | Msa0243710 | 0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa0006390 | Msa0244860 | 0.822584 | 2.190309e-53 | -8.615850e-47 |
| Msa0006390 | Msa0244960 | 0.808822 | 2.564121e-50 | -8.615850e-47 |
| Msa0006390 | Msa0249100 | 0.820415 | 6.943669e-53 | -8.615850e-47 |
| Msa0006390 | Msa0258760 | 0.833074 | 6.573111e-56 | -8.615850e-47 |
| Msa0006390 | Msa0262510 | 0.801503 | 8.731667e-49 | -8.615850e-47 |
| Msa0006390 | Msa0274730 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa0006390 | Msa0283450 | 0.825660 | 4.151811e-54 | -8.615850e-47 |
| Msa0006390 | Msa0284520 | 0.826516 | 2.598949e-54 | -8.615850e-47 |
| Msa0006390 | Msa0287310 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
| Msa0006390 | Msa0292930 | 0.807502 | 4.898644e-50 | -8.615850e-47 |
| Msa0006390 | Msa0315530 | 0.810627 | 1.049336e-50 | -8.615850e-47 |
| Msa0006390 | Msa0316800 | 0.801891 | 7.270620e-49 | -8.615850e-47 |
| Msa0006390 | Msa0323080 | 0.833501 | 5.144053e-56 | -8.615850e-47 |
| Msa0006390 | Msa0323610 | 0.839919 | 1.187871e-57 | -8.615850e-47 |
| Msa0006390 | Msa0328810 | 0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa0006390 | Msa0332000 | 0.807764 | 4.309164e-50 | -8.615850e-47 |
| Msa0006390 | Msa0335040 | 0.809914 | 1.494860e-50 | -8.615850e-47 |
| Msa0006390 | Msa0339620 | 0.805738 | 1.154973e-49 | -8.615850e-47 |
| Msa0006390 | Msa0344830 | 0.819065 | 1.412111e-52 | -8.615850e-47 |
| Msa0006390 | Msa0347360 | 0.821184 | 4.621442e-53 | -8.615850e-47 |
| Msa0006390 | Msa0355220 | 0.803988 | 2.680582e-49 | -8.615850e-47 |
| Msa0006390 | Msa0356960 | 0.804923 | 1.711032e-49 | -8.615850e-47 |
| Msa0006390 | Msa0361780 | 0.807692 | 4.463999e-50 | -8.615850e-47 |
| Msa0006390 | Msa0376590 | 0.808921 | 2.442548e-50 | -8.615850e-47 |
| Msa0006390 | Msa0387250 | 0.801568 | 8.466910e-49 | -8.615850e-47 |
| Msa0006390 | Msa0388950 | 0.803252 | 3.809116e-49 | -8.615850e-47 |
| Msa0006390 | Msa0388960 | 0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0006390 | Msa0390400 | -0.802643 | 5.089610e-49 | -8.615850e-47 |
| Msa0006390 | Msa0395790 | 0.806325 | 8.688108e-50 | -8.615850e-47 |
| Msa0006390 | Msa0402290 | 0.806163 | 9.400815e-50 | -8.615850e-47 |
| Msa0006390 | Msa0416300 | 0.835571 | 1.553214e-56 | -8.615850e-47 |
| Msa0006390 | Msa0419820 | 0.805653 | 1.203358e-49 | -8.615850e-47 |
| Msa0006390 | Msa0424320 | 0.805836 | 1.101425e-49 | -8.615850e-47 |
| Msa0006390 | Msa0438200 | 0.802268 | 6.081962e-49 | -8.615850e-47 |
| Msa0006390 | Msa0439970 | 0.819575 | 1.080628e-52 | -8.615850e-47 |
| Msa0006390 | Msa0449760 | 0.839569 | 1.464984e-57 | -8.615850e-47 |
| Msa0006390 | Msa0449830 | 0.826540 | 2.565550e-54 | -8.615850e-47 |
| Msa0006390 | Msa0452960 | 0.810188 | 1.304985e-50 | -8.615850e-47 |
| Msa0006390 | Msa0458440 | 0.819010 | 1.453424e-52 | -8.615850e-47 |
| Msa0006390 | Msa0459260 | 0.823980 | 1.034110e-53 | -8.615850e-47 |
| Msa0006390 | Msa0466390 | 0.821000 | 5.095315e-53 | -8.615850e-47 |
| Msa0006390 | Msa0468290 | 0.818626 | 1.777255e-52 | -8.615850e-47 |
| Msa0006390 | Msa0471800 | 0.810183 | 1.308066e-50 | -8.615850e-47 |
| Msa0006390 | Msa0484780 | 0.846703 | 1.839074e-59 | -8.615850e-47 |
| Msa0006390 | Msa0488270 | 0.828677 | 7.869536e-55 | -8.615850e-47 |
| Msa0006390 | Msa0502890 | 0.816282 | 5.992690e-52 | -8.615850e-47 |
| Msa0006390 | Msa0503060 | 0.814919 | 1.205501e-51 | -8.615850e-47 |
| Msa0006390 | Msa0516370 | 0.803766 | 2.980551e-49 | -8.615850e-47 |
| Msa0006390 | Msa0518610 | 0.811837 | 5.732556e-51 | -8.615850e-47 |
| Msa0006390 | Msa0521880 | 0.807229 | 5.596478e-50 | -8.615850e-47 |
| Msa0006390 | Msa0523460 | 0.818307 | 2.098306e-52 | -8.615850e-47 |
| Msa0006390 | Msa0523940 | 0.828910 | 6.914505e-55 | -8.615850e-47 |
| Msa0006390 | Msa0532350 | 0.800121 | 1.671666e-48 | -8.615850e-47 |
| Msa0006390 | Msa0534440 | 0.817368 | 3.419520e-52 | -8.615850e-47 |
| Msa0006390 | Msa0538600 | 0.817178 | 3.772936e-52 | -8.615850e-47 |
| Msa0006390 | Msa0554740 | 0.800579 | 1.349033e-48 | -8.615850e-47 |
| Msa0006390 | Msa0562440 | 0.837588 | 4.757632e-57 | -8.615850e-47 |
| Msa0006390 | Msa0576880 | 0.809510 | 1.826320e-50 | -8.615850e-47 |
| Msa0006390 | Msa0578860 | 0.802668 | 5.030505e-49 | -8.615850e-47 |
| Msa0006390 | Msa0578920 | 0.801377 | 9.265274e-49 | -8.615850e-47 |
| Msa0006390 | Msa0591060 | 0.801985 | 6.953829e-49 | -8.615850e-47 |
| Msa0006390 | Msa0599890 | 0.804098 | 2.542581e-49 | -8.615850e-47 |
| Msa0006390 | Msa0610880 | 0.814918 | 1.206276e-51 | -8.615850e-47 |
| Msa0006390 | Msa0616160 | 0.809903 | 1.503510e-50 | -8.615850e-47 |
| Msa0006390 | Msa0621590 | 0.816425 | 5.566206e-52 | -8.615850e-47 |
| Msa0006390 | Msa0626280 | 0.811966 | 5.375095e-51 | -8.615850e-47 |
| Msa0006390 | Msa0626360 | 0.822441 | 2.364562e-53 | -8.615850e-47 |
| Msa0006390 | Msa0626820 | 0.801299 | 9.612740e-49 | -8.615850e-47 |
| Msa0006390 | Msa0638070 | 0.806374 | 8.484479e-50 | -8.615850e-47 |
| Msa0006390 | Msa0638610 | 0.801983 | 6.959411e-49 | -8.615850e-47 |
| Msa0006390 | Msa0649980 | 0.804164 | 2.463165e-49 | -8.615850e-47 |
| Msa0006390 | Msa0653390 | 0.807777 | 4.282029e-50 | -8.615850e-47 |
| Msa0006390 | Msa0657750 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0006390 | Msa0657970 | 0.819442 | 1.158688e-52 | -8.615850e-47 |
| Msa0006390 | Msa0660300 | 0.801288 | 9.664237e-49 | -8.615850e-47 |
| Msa0006390 | Msa0661870 | 0.812262 | 4.631373e-51 | -8.615850e-47 |
| Msa0006390 | Msa0663240 | 0.816386 | 5.679330e-52 | -8.615850e-47 |
| Msa0006390 | Msa0663250 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
| Msa0006390 | Msa0664950 | 0.813083 | 3.063190e-51 | -8.615850e-47 |
| Msa0006390 | Msa0669410 | 0.813171 | 2.929620e-51 | -8.615850e-47 |
| Msa0006390 | Msa0673460 | 0.811889 | 5.584508e-51 | -8.615850e-47 |
| Msa0006390 | Msa0680200 | 0.800835 | 1.195932e-48 | -8.615850e-47 |
| Msa0006390 | Msa0681270 | 0.807177 | 5.740848e-50 | -8.615850e-47 |
| Msa0006390 | Msa0682550 | 0.823571 | 1.289701e-53 | -8.615850e-47 |
| Msa0006390 | Msa0685750 | 0.801362 | 9.333204e-49 | -8.615850e-47 |
| Msa0006390 | Msa0688480 | 0.820928 | 5.292923e-53 | -8.615850e-47 |
| Msa0006390 | Msa0690520 | 0.809877 | 1.522636e-50 | -8.615850e-47 |
| Msa0006390 | Msa0693380 | 0.809981 | 1.446147e-50 | -8.615850e-47 |
| Msa0006390 | Msa0701010 | 0.800337 | 1.510804e-48 | -8.615850e-47 |
| Msa0006390 | Msa0702680 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
| Msa0006390 | Msa0703050 | 0.814270 | 1.677794e-51 | -8.615850e-47 |
| Msa0006390 | Msa0715620 | 0.823992 | 1.027517e-53 | -8.615850e-47 |
| Msa0006390 | Msa0735170 | 0.804067 | 2.580930e-49 | -8.615850e-47 |
| Msa0006390 | Msa0740640 | 0.840360 | 9.111553e-58 | -8.615850e-47 |
| Msa0006390 | Msa0743720 | 0.825685 | 4.095905e-54 | -8.615850e-47 |
| Msa0006390 | Msa0753790 | 0.817122 | 3.884955e-52 | -8.615850e-47 |
| Msa0006390 | Msa0767760 | 0.808807 | 2.583064e-50 | -8.615850e-47 |
| Msa0006390 | Msa0787470 | 0.812341 | 4.451727e-51 | -8.615850e-47 |
| Msa0006390 | Msa0794510 | -0.845082 | 5.069989e-59 | -8.615850e-47 |
| Msa0006390 | Msa0795080 | 0.801925 | 7.152035e-49 | -8.615850e-47 |
| Msa0006390 | Msa0798430 | 0.819189 | 1.323751e-52 | -8.615850e-47 |
| Msa0006390 | Msa0800210 | 0.812638 | 3.833443e-51 | -8.615850e-47 |
| Msa0006390 | Msa0824680 | 0.802127 | 6.501757e-49 | -8.615850e-47 |
| Msa0006390 | Msa0828850 | 0.811603 | 6.446570e-51 | -8.615850e-47 |
| Msa0006390 | Msa0832320 | 0.834368 | 3.121778e-56 | -8.615850e-47 |
| Msa0006390 | Msa0832340 | 0.809969 | 1.455025e-50 | -8.615850e-47 |
| Msa0006390 | Msa0842650 | 0.806571 | 7.712078e-50 | -8.615850e-47 |
| Msa0006390 | Msa0842710 | 0.816615 | 5.046390e-52 | -8.615850e-47 |
| Msa0006390 | Msa0844240 | 0.803520 | 3.352404e-49 | -8.615850e-47 |
| Msa0006390 | Msa0845000 | 0.804148 | 2.481958e-49 | -8.615850e-47 |
| Msa0006390 | Msa0849030 | 0.800996 | 1.109087e-48 | -8.615850e-47 |
| Msa0006390 | Msa0850960 | 0.808427 | 3.113148e-50 | -8.615850e-47 |
| Msa0006390 | Msa0868700 | 0.805709 | 1.171060e-49 | -8.615850e-47 |
| Msa0006390 | Msa0875620 | 0.805653 | 1.203443e-49 | -8.615850e-47 |
| Msa0006390 | Msa0876190 | 0.811620 | 6.392540e-51 | -8.615850e-47 |
| Msa0006390 | Msa0876580 | 0.801823 | 7.508296e-49 | -8.615850e-47 |
| Msa0006390 | Msa0880140 | 0.835804 | 1.355725e-56 | -8.615850e-47 |
| Msa0006390 | Msa0893950 | 0.804148 | 2.482246e-49 | -8.615850e-47 |
| Msa0006390 | Msa0896220 | 0.811426 | 7.044658e-51 | -8.615850e-47 |
| Msa0006390 | Msa0896750 | 0.801318 | 9.526277e-49 | -8.615850e-47 |
| Msa0006390 | Msa0907070 | 0.836066 | 1.163602e-56 | -8.615850e-47 |
| Msa0006390 | Msa0924310 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0006390 | Msa0925250 | 0.812133 | 4.941652e-51 | -8.615850e-47 |
| Msa0006390 | Msa0925290 | 0.839733 | 1.328145e-57 | -8.615850e-47 |
| Msa0006390 | Msa0927380 | 0.801476 | 8.844176e-49 | -8.615850e-47 |
| Msa0006390 | Msa0932780 | -0.809387 | 1.939986e-50 | -8.615850e-47 |
| Msa0006390 | Msa0937670 | 0.806302 | 8.785588e-50 | -8.615850e-47 |
| Msa0006390 | Msa0952120 | 0.805725 | 1.162049e-49 | -8.615850e-47 |
| Msa0006390 | Msa0953120 | 0.816632 | 5.002223e-52 | -8.615850e-47 |
| Msa0006390 | Msa0969520 | 0.821387 | 4.148154e-53 | -8.615850e-47 |
| Msa0006390 | Msa0969570 | 0.805365 | 1.382894e-49 | -8.615850e-47 |
| Msa0006390 | Msa0969670 | 0.807171 | 5.757361e-50 | -8.615850e-47 |
| Msa0006390 | Msa0975220 | 0.812620 | 3.868790e-51 | -8.615850e-47 |
| Msa0006390 | Msa0983090 | 0.813827 | 2.101248e-51 | -8.615850e-47 |
| Msa0006390 | Msa1000880 | 0.814017 | 1.908412e-51 | -8.615850e-47 |
| Msa0006390 | Msa1000940 | 0.820049 | 8.421077e-53 | -8.615850e-47 |
| Msa0006390 | Msa1002360 | 0.821759 | 3.404076e-53 | -8.615850e-47 |
| Msa0006390 | Msa1014540 | 0.820598 | 6.304132e-53 | -8.615850e-47 |
| Msa0006390 | Msa1019840 | -0.801853 | 7.399850e-49 | -8.615850e-47 |
| Msa0006390 | Msa1026760 | 0.820652 | 6.125137e-53 | -8.615850e-47 |
| Msa0006390 | Msa1026790 | 0.822408 | 2.407435e-53 | -8.615850e-47 |
| Msa0006390 | Msa1027290 | 0.802457 | 5.558912e-49 | -8.615850e-47 |
| Msa0006390 | Msa1029210 | 0.811886 | 5.593317e-51 | -8.615850e-47 |
| Msa0006390 | Msa1030970 | 0.835190 | 1.938434e-56 | -8.615850e-47 |
| Msa0006390 | Msa1032850 | 0.801064 | 1.073865e-48 | -8.615850e-47 |
| Msa0006390 | Msa1038740 | 0.804434 | 2.164523e-49 | -8.615850e-47 |
| Msa0006390 | Msa1045200 | 0.800654 | 1.302005e-48 | -8.615850e-47 |
| Msa0006390 | Msa1046300 | 0.809424 | 1.905643e-50 | -8.615850e-47 |
| Msa0006390 | Msa1049010 | 0.817687 | 2.898117e-52 | -8.615850e-47 |
| Msa0006390 | Msa1052830 | 0.818955 | 1.496014e-52 | -8.615850e-47 |
| Msa0006390 | Msa1058580 | 0.818459 | 1.938415e-52 | -8.615850e-47 |
| Msa0006390 | Msa1068200 | -0.811848 | 5.700287e-51 | -8.615850e-47 |
| Msa0006390 | Msa1075220 | -0.822861 | 1.888388e-53 | -8.615850e-47 |
| Msa0006390 | Msa1075650 | 0.811296 | 7.517561e-51 | -8.615850e-47 |
| Msa0006390 | Msa1081330 | 0.803032 | 4.229709e-49 | -8.615850e-47 |
| Msa0006390 | Msa1082500 | 0.847679 | 9.925219e-60 | -8.615850e-47 |
| Msa0006390 | Msa1090260 | 0.803950 | 2.729317e-49 | -8.615850e-47 |
| Msa0006390 | Msa1108160 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
| Msa0006390 | Msa1111180 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
| Msa0006390 | Msa1116690 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
| Msa0006390 | Msa1117170 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
| Msa0006390 | Msa1117660 | 0.802399 | 5.715556e-49 | -8.615850e-47 |
| Msa0006390 | Msa1131940 | -0.825697 | 4.068720e-54 | -8.615850e-47 |
| Msa0006390 | Msa1137570 | 0.814504 | 1.489653e-51 | -8.615850e-47 |
| Msa0006390 | Msa1137600 | 0.819534 | 1.104460e-52 | -8.615850e-47 |
| Msa0006390 | Msa1151730 | 0.814932 | 1.197772e-51 | -8.615850e-47 |
| Msa0006390 | Msa1154160 | 0.809251 | 2.074778e-50 | -8.615850e-47 |
| Msa0006390 | Msa1154780 | 0.805774 | 1.134771e-49 | -8.615850e-47 |
| Msa0006390 | Msa1156020 | 0.801562 | 8.494053e-49 | -8.615850e-47 |
| Msa0006390 | Msa1162550 | -0.818351 | 2.051097e-52 | -8.615850e-47 |
| Msa0006390 | Msa1172670 | 0.809902 | 1.504160e-50 | -8.615850e-47 |
| Msa0006390 | Msa1174040 | 0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0006390 | Msa1185980 | 0.803804 | 2.926372e-49 | -8.615850e-47 |
| Msa0006390 | Msa1192990 | 0.826360 | 2.832042e-54 | -8.615850e-47 |
| Msa0006390 | Msa1193290 | 0.816549 | 5.221514e-52 | -8.615850e-47 |
| Msa0006390 | Msa1199220 | 0.836839 | 7.397806e-57 | -8.615850e-47 |
| Msa0006390 | Msa1199830 | -0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0006390 | Msa1205130 | 0.830532 | 2.785050e-55 | -8.615850e-47 |
| Msa0006390 | Msa1228210 | 0.810624 | 1.051027e-50 | -8.615850e-47 |
| Msa0006390 | Msa1231790 | 0.801599 | 8.345059e-49 | -8.615850e-47 |
| Msa0006390 | Msa1233500 | 0.814617 | 1.406302e-51 | -8.615850e-47 |
| Msa0006390 | Msa1233890 | 0.833126 | 6.377420e-56 | -8.615850e-47 |
| Msa0006390 | Msa1238470 | 0.804132 | 2.501669e-49 | -8.615850e-47 |
| Msa0006390 | Msa1242220 | 0.806377 | 8.471198e-50 | -8.615850e-47 |
| Msa0006390 | Msa1244250 | 0.825510 | 4.506169e-54 | -8.615850e-47 |
| Msa0006390 | Msa1261250 | 0.815905 | 7.274238e-52 | -8.615850e-47 |
| Msa0006390 | Msa1269940 | 0.804117 | 2.519806e-49 | -8.615850e-47 |
| Msa0006390 | Msa1273920 | 0.803000 | 4.294254e-49 | -8.615850e-47 |
| Msa0006390 | Msa1276660 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa0006390 | Msa1278840 | 0.835797 | 1.361212e-56 | -8.615850e-47 |
| Msa0006390 | Msa1280130 | 0.820217 | 7.706241e-53 | -8.615850e-47 |
| Msa0006390 | Msa1284680 | 0.829602 | 4.697222e-55 | -8.615850e-47 |
| Msa0006390 | Msa1291660 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0006390 | Msa1306850 | 0.813891 | 2.034184e-51 | -8.615850e-47 |
| Msa0006390 | Msa1310210 | 0.812908 | 3.346202e-51 | -8.615850e-47 |
| Msa0006390 | Msa1313140 | 0.803576 | 3.264141e-49 | -8.615850e-47 |
| Msa0006390 | Msa1314340 | 0.816336 | 5.827190e-52 | -8.615850e-47 |
| Msa0006390 | Msa1317980 | 0.808189 | 3.499971e-50 | -8.615850e-47 |
| Msa0006390 | Msa1318990 | 0.802943 | 4.413613e-49 | -8.615850e-47 |
| Msa0006390 | Msa1320620 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0006390 | Msa1336710 | 0.803996 | 2.669884e-49 | -8.615850e-47 |
| Msa0006390 | Msa1340020 | 0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa0006390 | Msa1348360 | 0.809117 | 2.217375e-50 | -8.615850e-47 |
| Msa0006390 | Msa1348950 | 0.825378 | 4.842460e-54 | -8.615850e-47 |
| Msa0006390 | Msa1353470 | 0.806941 | 6.441475e-50 | -8.615850e-47 |
| Msa0006390 | Msa1359040 | 0.810419 | 1.163512e-50 | -8.615850e-47 |
| Msa0006390 | Msa1360060 | 0.819190 | 1.322877e-52 | -8.615850e-47 |
| Msa0006390 | Msa1362880 | 0.813928 | 1.996478e-51 | -8.615850e-47 |
| Msa0006390 | Msa1369530 | 0.801738 | 7.814112e-49 | -8.615850e-47 |
| Msa0006390 | Msa1372760 | 0.834369 | 3.119507e-56 | -8.615850e-47 |
| Msa0006390 | Msa1386430 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
| Msa0006390 | Msa1390050 | 0.802213 | 6.242114e-49 | -8.615850e-47 |
| Msa0006390 | Msa1393040 | 0.801924 | 7.157079e-49 | -8.615850e-47 |
| Msa0006390 | Msa1393410 | 0.802799 | 4.725551e-49 | -8.615850e-47 |
| Msa0006390 | Msa1397860 | 0.800849 | 1.188478e-48 | -8.615850e-47 |
| Msa0006390 | Msa1403480 | 0.811847 | 5.703887e-51 | -8.615850e-47 |
| Msa0006390 | Msa1409870 | 0.828353 | 9.426510e-55 | -8.615850e-47 |
| Msa0006390 | Msa1410690 | 0.816781 | 4.634232e-52 | -8.615850e-47 |
| Msa0006390 | Msa1411020 | 0.836948 | 6.936021e-57 | -8.615850e-47 |
| Msa0006390 | Msa1420290 | 0.814539 | 1.463616e-51 | -8.615850e-47 |
| Msa0006390 | Msa1420490 | 0.810707 | 1.008065e-50 | -8.615850e-47 |
| Msa0006390 | Msa1423390 | 0.810264 | 1.256696e-50 | -8.615850e-47 |
| Msa0006390 | Msa1423870 | 0.802883 | 4.541270e-49 | -8.615850e-47 |
| Msa0006390 | Msa1424290 | 0.834912 | 2.278271e-56 | -8.615850e-47 |
| Msa0006390 | Msa1424680 | 0.817856 | 2.654241e-52 | -8.615850e-47 |
| Msa0006390 | Msa1427230 | 0.801585 | 8.400123e-49 | -8.615850e-47 |
| Msa0006390 | Msa1429680 | 0.813978 | 1.946398e-51 | -8.615850e-47 |
| Msa0006390 | Msa1434350 | 0.834025 | 3.804334e-56 | -8.615850e-47 |
| Msa0006390 | Msa1435270 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
| Msa0006390 | Msa1435420 | 0.804063 | 2.585151e-49 | -8.615850e-47 |
| Msa0006390 | Msa1438970 | 0.806317 | 8.723705e-50 | -8.615850e-47 |
| Msa0006390 | Msa1439320 | 0.839944 | 1.169873e-57 | -8.615850e-47 |
| Msa0006390 | Msa1440370 | 0.811957 | 5.398920e-51 | -8.615850e-47 |
| Msa0006390 | Msa1440810 | 0.808036 | 3.772261e-50 | -8.615850e-47 |
| Msa0006390 | Msa1441190 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0006390 | Msa1445080 | 0.801175 | 1.019422e-48 | -8.615850e-47 |
| Msa0006390 | Msa1448640 | 0.827666 | 1.379252e-54 | -8.615850e-47 |
| Msa0006390 | Msa1451620 | -0.809400 | 1.927952e-50 | -8.615850e-47 |
| Msa0006390 | Msa1453080 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa0006390 | Msa1454840 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0006390 | Msa1459950 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0006390 | Msa1461250 | -0.831766 | 1.386176e-55 | -8.615850e-47 |
| Msa0006390 | Msa1464940 | 0.803765 | 2.982464e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006390 | MtrunA17_Chr1g0149721 | 97.634 | 465 | 1 | 1 | 1 | 455 | 1 | 465 | 0.0 | 929 |
| Msa0006390 | MtrunA17_Chr3g0139821 | 54.415 | 419 | 189 | 2 | 30 | 447 | 33 | 450 | 2.83e-165 | 473 |
| Msa0006390 | MtrunA17_Chr4g0041371 | 47.342 | 395 | 206 | 2 | 53 | 447 | 25 | 417 | 6.04e-133 | 390 |
| Msa0006390 | MtrunA17_Chr4g0041351 | 49.130 | 230 | 116 | 1 | 218 | 447 | 3 | 231 | 6.61e-82 | 253 |
| Msa0006390 | MtrunA17_Chr4g0005811 | 96.296 | 54 | 2 | 0 | 324 | 377 | 23 | 76 | 4.31e-31 | 114 |
| Msa0006390 | MtrunA17_Chr4g0041361 | 42.537 | 134 | 75 | 2 | 53 | 185 | 20 | 152 | 5.71e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0006390 | AT4G31990.1 | 84.234 | 444 | 66 | 2 | 16 | 455 | 10 | 453 | 0.0 | 783 |
| Msa0006390 | AT4G31990.2 | 84.234 | 444 | 66 | 2 | 16 | 455 | 10 | 453 | 0.0 | 783 |
| Msa0006390 | AT4G31990.3 | 84.163 | 442 | 66 | 2 | 16 | 453 | 10 | 451 | 0.0 | 778 |
| Msa0006390 | AT4G31990.4 | 83.673 | 441 | 69 | 3 | 16 | 455 | 10 | 448 | 0.0 | 767 |
| Msa0006390 | AT5G19550.1 | 56.061 | 396 | 172 | 2 | 53 | 447 | 3 | 397 | 1.25e-164 | 470 |
| Msa0006390 | AT5G11520.1 | 55.750 | 400 | 175 | 2 | 49 | 447 | 43 | 441 | 1.42e-162 | 466 |
| Msa0006390 | AT1G62800.2 | 52.062 | 388 | 184 | 2 | 61 | 447 | 11 | 397 | 1.38e-146 | 424 |
| Msa0006390 | AT1G62800.1 | 52.196 | 387 | 183 | 2 | 61 | 447 | 11 | 395 | 1.42e-146 | 424 |
| Msa0006390 | AT2G30970.1 | 49.620 | 395 | 197 | 2 | 53 | 447 | 31 | 423 | 2.60e-139 | 407 |
| Msa0006390 | AT2G30970.2 | 49.620 | 395 | 197 | 2 | 53 | 447 | 31 | 423 | 2.60e-139 | 407 |
| Msa0006390 | AT1G62800.3 | 51.376 | 327 | 158 | 1 | 61 | 386 | 11 | 337 | 1.41e-122 | 360 |
Find 132 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAACTTCTCCAATTTA+AGG | 0.097948 | 1_1:+9259660 | Msa0006390:CDS |
| CGTTATCGGTTCTTCAAAAT+TGG | 0.167949 | 1_1:+9263474 | Msa0006390:three_prime_UTR |
| GCCACTGTCCAAGGTCTTTC+AGG | 0.182756 | 1_1:+9261199 | Msa0006390:CDS |
| CTCTTTCTGTTGCGTTGTTT+TGG | 0.230258 | 1_1:+9259440 | Msa0006390:five_prime_UTR |
| CAACACCTTGTTGCAGATTC+TGG | 0.233595 | 1_1:-9262245 | None:intergenic |
| ATATATACACACCCTTAAAT+TGG | 0.244433 | 1_1:-9259672 | None:intergenic |
| ATGATTCACGTACATTGATA+TGG | 0.296563 | 1_1:+9263546 | Msa0006390:three_prime_UTR |
| TGTGCTTAATGTTGTGAAAA+AGG | 0.302533 | 1_1:+9260702 | Msa0006390:CDS |
| ACTCTTTGCTGTTTGATTGC+TGG | 0.307680 | 1_1:-9261060 | None:intergenic |
| CATACTCTAAATCAATAATT+AGG | 0.315030 | 1_1:-9263412 | None:intergenic |
| AACAGAAAGAGTTGCGAAAA+TGG | 0.316131 | 1_1:-9259428 | None:intergenic |
| GTATCTCCCCATTGAGGGTT+TGG | 0.326774 | 1_1:+9260990 | Msa0006390:intron |
| AAATCCAAGCCAACCGTCTT+GGG | 0.329247 | 1_1:-9261458 | None:intergenic |
| GCTCCTCCTGATCCAATTCT+TGG | 0.345870 | 1_1:+9260592 | Msa0006390:CDS |
| GCTTCAGAAACTCCAAGAAT+TGG | 0.355675 | 1_1:-9260604 | None:intergenic |
| AGGATTGTTGCTAATATTGT+TGG | 0.362974 | 1_1:+9262706 | Msa0006390:CDS |
| CATGATTTCCAAAGGGACTT+TGG | 0.363583 | 1_1:-9263313 | None:intergenic |
| TTCACAACATTAAGCACATA+TGG | 0.368331 | 1_1:-9260697 | None:intergenic |
| ATGATTTCCAAAGGGACTTT+GGG | 0.369599 | 1_1:-9263312 | None:intergenic |
| CTCCAACCCTTTCAGCATAA+AGG | 0.377297 | 1_1:-9262199 | None:intergenic |
| CAACAACTTCTCCAATTTAA+GGG | 0.377921 | 1_1:+9259661 | Msa0006390:CDS |
| CTGTTGCGACTAATGTTTCT+CGG | 0.378388 | 1_1:+9260551 | Msa0006390:CDS |
| GACTAATGTTTCTCGGTTTG+AGG | 0.382204 | 1_1:+9260558 | Msa0006390:CDS |
| ATCTGCAAGGTATTCACATT+TGG | 0.389303 | 1_1:-9263136 | None:intergenic |
| GTCCAAGGTCTTTCAGGAAC+TGG | 0.391375 | 1_1:+9261205 | Msa0006390:CDS |
| TCAAGCTCAATCTTGGAGTT+GGG | 0.403543 | 1_1:+9260650 | Msa0006390:CDS |
| CACGGGCTTGAACAAGAGCC+AGG | 0.407205 | 1_1:+9262885 | Msa0006390:CDS |
| AGTGATATGAAATGAAACTA+TGG | 0.408569 | 1_1:-9259340 | None:intergenic |
| GGATTGTTGCTAATATTGTT+GGG | 0.416631 | 1_1:+9262707 | Msa0006390:CDS |
| GGGCATGATAGAAGATATAA+AGG | 0.426415 | 1_1:+9261484 | Msa0006390:CDS |
| ACTTTGATTCAACTTATTCA+AGG | 0.427967 | 1_1:-9263342 | None:intergenic |
| AGCGATGTCAAGCTCAATCT+TGG | 0.430594 | 1_1:+9260643 | Msa0006390:CDS |
| GGATTCAAATCCTGCCTTCA+AGG | 0.430636 | 1_1:+9263567 | Msa0006390:three_prime_UTR |
| ATATGTACCCAAAGTCCCTT+TGG | 0.439550 | 1_1:+9263305 | Msa0006390:three_prime_UTR |
| AAATGCAGCCAAACCCTCAA+TGG | 0.440208 | 1_1:-9260998 | None:intergenic |
| TGATGAATGGAAAGCAGAAA+TGG | 0.440679 | 1_1:+9262744 | Msa0006390:CDS |
| AATGCAGCCAAACCCTCAAT+GGG | 0.453593 | 1_1:-9260997 | None:intergenic |
| AAAATCCAAGCCAACCGTCT+TGG | 0.459473 | 1_1:-9261459 | None:intergenic |
| ACTAATGTTTCTCGGTTTGA+GGG | 0.459873 | 1_1:+9260559 | Msa0006390:CDS |
| CTCCAGCTCTCTTTGATGAA+TGG | 0.460717 | 1_1:+9262731 | Msa0006390:CDS |
| TCATTCATACTTAAGCAGAT+AGG | 0.464525 | 1_1:+9262850 | Msa0006390:CDS |
| ACAATCCTAGCCCCGTGAAC+TGG | 0.466986 | 1_1:-9262691 | None:intergenic |
| GGGTAAAGAGTCAATTGAAA+AGG | 0.468824 | 1_1:+9262641 | Msa0006390:intron |
| GTCAAGCTCAATCTTGGAGT+TGG | 0.472512 | 1_1:+9260649 | Msa0006390:CDS |
| TTCCCTGGCAGGATTGTCGC+TGG | 0.473125 | 1_1:+9263113 | Msa0006390:CDS |
| CCTCGGCCTTTATGCTGAAA+GGG | 0.475126 | 1_1:+9262193 | Msa0006390:CDS |
| ACCTCGGCCTTTATGCTGAA+AGG | 0.476101 | 1_1:+9262192 | Msa0006390:CDS |
| GATAGGCATGTTCTCATTCA+CGG | 0.476276 | 1_1:+9262867 | Msa0006390:CDS |
| TGACCCCAAGACGGTTGGCT+TGG | 0.482318 | 1_1:+9261454 | Msa0006390:CDS |
| GTCAATAGATGAAACAGTTA+CGG | 0.482962 | 1_1:+9263507 | Msa0006390:three_prime_UTR |
| TTCCATTCATCAAAGAGAGC+TGG | 0.483532 | 1_1:-9262733 | None:intergenic |
| ACTCAGGTTGCCACTGTCCA+AGG | 0.484927 | 1_1:+9261190 | Msa0006390:intron |
| CAACAGGGAAAGCTTAAGCT+TGG | 0.487736 | 1_1:+9259635 | Msa0006390:intron |
| ATTTCTTCAAAAGACAAAAG+TGG | 0.499207 | 1_1:+9262817 | Msa0006390:CDS |
| GGCCTTTATGCTGAAAGGGT+TGG | 0.499920 | 1_1:+9262197 | Msa0006390:CDS |
| GTCATCTGGTCGGATCTGTA+TGG | 0.500187 | 1_1:+9260528 | Msa0006390:intron |
| TGAAGCAGAGTGTGAAGGTA+CGG | 0.501393 | 1_1:-9259511 | None:intergenic |
| GAAACTCCAAGAATTGGATC+AGG | 0.502800 | 1_1:-9260598 | None:intergenic |
| TACTCTAATCCACCAGTTCA+CGG | 0.502971 | 1_1:+9262679 | Msa0006390:CDS |
| TTGCAGTATCTCCCCATTGA+GGG | 0.508032 | 1_1:+9260985 | Msa0006390:intron |
| TTGTAGTTCTTCCGTTCTGT+AGG | 0.509216 | 1_1:-9260674 | None:intergenic |
| ATGTGTCAATCACTATGATT+TGG | 0.509330 | 1_1:-9263245 | None:intergenic |
| TTAGGCAGAAAATCTTATGC+TGG | 0.512452 | 1_1:+9260860 | Msa0006390:intron |
| TTCAAAAGACAAAAGTGGAA+AGG | 0.512714 | 1_1:+9262822 | Msa0006390:CDS |
| ATAGGCATGTTCTCATTCAC+GGG | 0.515655 | 1_1:+9262868 | Msa0006390:CDS |
| GAAAATCTTATGCTGGAGAG+AGG | 0.523108 | 1_1:+9260867 | Msa0006390:CDS |
| CATATATACATGACAAAGGA+TGG | 0.524159 | 1_1:+9263084 | Msa0006390:CDS |
| ATCCACCAGTTCACGGGGCT+AGG | 0.527581 | 1_1:+9262686 | Msa0006390:CDS |
| TGTTTATTCAGTCATCTGGT+CGG | 0.530552 | 1_1:+9260518 | Msa0006390:intron |
| TGGCCAGCGACAATCCTGCC+AGG | 0.531090 | 1_1:-9263116 | None:intergenic |
| GAAAGCAGAAATGGAAATGA+TGG | 0.532291 | 1_1:+9262753 | Msa0006390:CDS |
| ACTCTAATCCACCAGTTCAC+GGG | 0.533141 | 1_1:+9262680 | Msa0006390:CDS |
| ATTGGATCAGGAGGAGCCAT+TGG | 0.533152 | 1_1:-9260586 | None:intergenic |
| TCGGTTTGAGGGTATACCAA+TGG | 0.538038 | 1_1:+9260570 | Msa0006390:CDS |
| AGTAGCACAAAAGTTCCTTC+CGG | 0.540828 | 1_1:-9261761 | None:intergenic |
| ATTGCAGTATCTCCCCATTG+AGG | 0.542657 | 1_1:+9260984 | Msa0006390:intron |
| AAGACAAAAGTGGAAAGGAT+TGG | 0.543794 | 1_1:+9262827 | Msa0006390:CDS |
| GTTACAACATGATTTCCAAA+GGG | 0.544564 | 1_1:-9263320 | None:intergenic |
| AAAATCTTATGCTGGAGAGA+GGG | 0.546257 | 1_1:+9260868 | Msa0006390:CDS |
| GGATGTGCACATAACCCTAC+TGG | 0.546697 | 1_1:+9261788 | Msa0006390:CDS |
| CCCTTTCAGCATAAAGGCCG+AGG | 0.547062 | 1_1:-9262193 | None:intergenic |
| GTGACAATATGACAAATAAG+TGG | 0.547417 | 1_1:+9263061 | Msa0006390:CDS |
| ACTGTTTCATCTATTGACAT+TGG | 0.547802 | 1_1:-9263502 | None:intergenic |
| GATCCTCGACACCAACATCA+AGG | 0.554684 | 1_1:+9259539 | Msa0006390:CDS |
| GCAGAAATGGAAATGATGGC+TGG | 0.555365 | 1_1:+9262757 | Msa0006390:CDS |
| ATCCTAGCCCCGTGAACTGG+TGG | 0.557228 | 1_1:-9262688 | None:intergenic |
| GGAACTGGTTCTCTGCGACT+AGG | 0.557349 | 1_1:+9261220 | Msa0006390:CDS |
| CAAGCTCAATCTTGGAGTTG+GGG | 0.560345 | 1_1:+9260651 | Msa0006390:CDS |
| AACCAGTTCCTGAAAGACCT+TGG | 0.562935 | 1_1:-9261207 | None:intergenic |
| TACTATGACCCCAAGACGGT+TGG | 0.567207 | 1_1:+9261449 | Msa0006390:CDS |
| GGGTTTGGCTGCATTTAACA+AGG | 0.567369 | 1_1:+9261005 | Msa0006390:CDS |
| GGTGTTGGATCAATACCAGT+AGG | 0.577041 | 1_1:-9261803 | None:intergenic |
| TCCTGAAAGACCTTGGACAG+TGG | 0.583931 | 1_1:-9261200 | None:intergenic |
| CCGTCTTGGGGTCATAGTAT+CGG | 0.584700 | 1_1:-9261445 | None:intergenic |
| GATGGAAGGATTTCCCTGGC+AGG | 0.584781 | 1_1:+9263102 | Msa0006390:CDS |
| AAATCTTATGCTGGAGAGAG+GGG | 0.586075 | 1_1:+9260869 | Msa0006390:CDS |
| CAGAAGCCGCATCTTCGTCA+AGG | 0.591253 | 1_1:-9262112 | None:intergenic |
| TGATCCAACACCAGAGCAGT+GGG | 0.592941 | 1_1:+9261814 | Msa0006390:CDS |
| GGTTACAACATGATTTCCAA+AGG | 0.593273 | 1_1:-9263321 | None:intergenic |
| AAAGGATGGAAGGATTTCCC+TGG | 0.594526 | 1_1:+9263098 | Msa0006390:CDS |
| TGGAGTTGGGGCCTACAGAA+CGG | 0.598254 | 1_1:+9260663 | Msa0006390:CDS |
| ATTGTTTGTATCACGTGGCA+TGG | 0.598987 | 1_1:+9262139 | Msa0006390:CDS |
| TATACATGACAAAGGATGGA+AGG | 0.601628 | 1_1:+9263088 | Msa0006390:CDS |
| CATACACAGAACCTTGATGT+TGG | 0.601911 | 1_1:-9259550 | None:intergenic |
| AATCCAAGCCAACCGTCTTG+GGG | 0.602261 | 1_1:-9261457 | None:intergenic |
| CTCTAATCCACCAGTTCACG+GGG | 0.602639 | 1_1:+9262681 | Msa0006390:CDS |
| AAATGGAAATGATGGCTGGA+AGG | 0.603044 | 1_1:+9262761 | Msa0006390:CDS |
| GTGATATGAAATGAAACTAT+GGG | 0.604316 | 1_1:-9259339 | None:intergenic |
| GCAACTGCAGAGTTGTTGCT+CGG | 0.605597 | 1_1:+9261027 | Msa0006390:CDS |
| TTGATCCAACACCAGAGCAG+TGG | 0.610585 | 1_1:+9261813 | Msa0006390:CDS |
| TAGTATCGGTACTCAGACCA+TGG | 0.615683 | 1_1:-9261431 | None:intergenic |
| ACTCCAAGAATTGGATCAGG+AGG | 0.616716 | 1_1:-9260595 | None:intergenic |
| AGCAGAGTGTGAAGGTACGG+AGG | 0.617408 | 1_1:-9259508 | None:intergenic |
| GAACCTTGATGTTGGTGTCG+AGG | 0.620995 | 1_1:-9259542 | None:intergenic |
| TGGAAGCCTTGACGAAGATG+CGG | 0.621669 | 1_1:+9262106 | Msa0006390:CDS |
| GGCCAGCGACAATCCTGCCA+GGG | 0.630137 | 1_1:-9263115 | None:intergenic |
| TCAACGATGCTCGAGTACCA+TGG | 0.630826 | 1_1:+9261414 | Msa0006390:CDS |
| CATCACCAGAATCTGCAACA+AGG | 0.632219 | 1_1:+9262240 | Msa0006390:CDS |
| TTTGATATCAAATCCTACGT+GGG | 0.636065 | 1_1:+9261282 | Msa0006390:CDS |
| GTGTTGGATCAATACCAGTA+GGG | 0.638468 | 1_1:-9261802 | None:intergenic |
| TTGATATCAAATCCTACGTG+GGG | 0.645817 | 1_1:+9261283 | Msa0006390:CDS |
| GTGAGATTGTTTGTATCACG+TGG | 0.647083 | 1_1:+9262134 | Msa0006390:CDS |
| AATCGATAATAGCATCTGCA+AGG | 0.649306 | 1_1:-9263149 | None:intergenic |
| GAAAGTGAAGCAGAGTGTGA+AGG | 0.650101 | 1_1:-9259516 | None:intergenic |
| GTGGCATATATACATGACAA+AGG | 0.654355 | 1_1:+9263080 | Msa0006390:CDS |
| TGTTGCAGATTCTGGTGATG+AGG | 0.660766 | 1_1:-9262237 | None:intergenic |
| ACTGGTGGATTAGAGTACAT+TGG | 0.674716 | 1_1:-9262673 | None:intergenic |
| GTTTGTATCACGTGGCATGG+AGG | 0.678811 | 1_1:+9262142 | Msa0006390:CDS |
| GGAGAGAGGGGAAAACAAAG+AGG | 0.684124 | 1_1:+9260881 | Msa0006390:CDS |
| CCGATACTATGACCCCAAGA+CGG | 0.704756 | 1_1:+9261445 | Msa0006390:CDS |
| ATAAAATTCACACCCCACGT+AGG | 0.732753 | 1_1:-9261295 | None:intergenic |
| ATGCAGCCAAACCCTCAATG+GGG | 0.751116 | 1_1:-9260996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATCATACTTTTTATA+TGG | + | chr1_1:9261537-9261556 | Msa0006390:intron | 10.0% |
| !!! | ATTAATCATACTTTTTATAT+GGG | + | chr1_1:9261538-9261557 | Msa0006390:intron | 10.0% |
| !! | TGATTAAATCATTCATAAAT+AGG | - | chr1_1:9259588-9259607 | None:intergenic | 15.0% |
| !!! | TTTAAAATTGCAATTGAAAT+TGG | + | chr1_1:9260417-9260436 | Msa0006390:intron | 15.0% |
| !! | TAATTTCACTTTCTAAATAA+TGG | - | chr1_1:9261522-9261541 | None:intergenic | 15.0% |
| !!! | TGTTTTACATTTTTTATAGT+CGG | + | chr1_1:9261736-9261755 | Msa0006390:intron | 15.0% |
| !!! | CTATTTTTTTAGTAAATTTG+TGG | + | chr1_1:9261922-9261941 | Msa0006390:intron | 15.0% |
| !!! | ATTAAATCATTTTACGTTAT+CGG | + | chr1_1:9263460-9263479 | Msa0006390:three_prime_UTR | 15.0% |
| !!! | TATTTTTGTTTTCATTCAAC+AGG | + | chr1_1:9259619-9259638 | Msa0006390:intron | 20.0% |
| !!! | ATTTTTGTTTTCATTCAACA+GGG | + | chr1_1:9259620-9259639 | Msa0006390:intron | 20.0% |
| !! | ATTACTCTATGATCAATTTA+AGG | + | chr1_1:9259748-9259767 | Msa0006390:intron | 20.0% |
| !! | TTACTCTATGATCAATTTAA+GGG | + | chr1_1:9259749-9259768 | Msa0006390:intron | 20.0% |
| !!! | TTTAAAATTGCTATTCAAAG+TGG | + | chr1_1:9260001-9260020 | Msa0006390:intron | 20.0% |
| !!! | TACAATTCTAATCTAAAGTA+AGG | - | chr1_1:9260134-9260153 | None:intergenic | 20.0% |
| !! | AAATTGGTTAATTAGGATTT+AGG | + | chr1_1:9260433-9260452 | Msa0006390:intron | 20.0% |
| !!! | TTGATGAAATTCTTGTTTTT+AGG | + | chr1_1:9260842-9260861 | Msa0006390:intron | 20.0% |
| !! | TATAAAAGAGAAAAGTCAAA+GGG | - | chr1_1:9262922-9262941 | None:intergenic | 20.0% |
| !! | ATATAAAAGAGAAAAGTCAA+AGG | - | chr1_1:9262923-9262942 | None:intergenic | 20.0% |
| !! | CATACTCTAAATCAATAATT+AGG | - | chr1_1:9263415-9263434 | None:intergenic | 20.0% |
| ! | GTGATATGAAATGAAACTAT+GGG | - | chr1_1:9259342-9259361 | None:intergenic | 25.0% |
| ! | AGTGATATGAAATGAAACTA+TGG | - | chr1_1:9259343-9259362 | None:intergenic | 25.0% |
| ! | ATATATACACACCCTTAAAT+TGG | - | chr1_1:9259675-9259694 | None:intergenic | 25.0% |
| ! | TCTTCAATGAACACAAAAAT+TGG | - | chr1_1:9259976-9259995 | None:intergenic | 25.0% |
| ! | ATTAGAATTGTAAAACCAAG+TGG | + | chr1_1:9260142-9260161 | Msa0006390:intron | 25.0% |
| !!! | TCTTATTTTTGTGTCCATAA+TGG | + | chr1_1:9260381-9260400 | Msa0006390:intron | 25.0% |
| ! | AACTATTCTTTGATCCATTA+TGG | - | chr1_1:9260398-9260417 | None:intergenic | 25.0% |
| ! | GCAATTGAAATTGGTTAATT+AGG | + | chr1_1:9260426-9260445 | Msa0006390:intron | 25.0% |
| !!! | ATTTTGTTTATTCAGTCATC+TGG | + | chr1_1:9260514-9260533 | Msa0006390:intron | 25.0% |
| !!! | TTGATGCTATGCTTTTTTTA+CGG | + | chr1_1:9260728-9260747 | Msa0006390:intron | 25.0% |
| ! | TAAGAAATCAATACATGACA+CGG | - | chr1_1:9260766-9260785 | None:intergenic | 25.0% |
| !! | ACAAAGAGGTAATTTTCTTT+AGG | + | chr1_1:9260895-9260914 | Msa0006390:intron | 25.0% |
| !! | TGTGAATTTTATTCCTTTCT+CGG | + | chr1_1:9261306-9261325 | Msa0006390:intron | 25.0% |
| ! | AATTAGAATATTCATGCAGT+TGG | + | chr1_1:9261694-9261713 | Msa0006390:intron | 25.0% |
| ! | TATATCGTGAAATAGATTCA+AGG | - | chr1_1:9262050-9262069 | None:intergenic | 25.0% |
| !! | TTTTATCAATCAAGAGTCAT+AGG | + | chr1_1:9262369-9262388 | Msa0006390:intron | 25.0% |
| ! | TTTATCAATCAAGAGTCATA+GGG | + | chr1_1:9262370-9262389 | Msa0006390:intron | 25.0% |
| ! | TTCAAATGTTTCGTTTAAGA+AGG | + | chr1_1:9262520-9262539 | Msa0006390:intron | 25.0% |
| ! | TGATGATTACTATGTATTTC+AGG | + | chr1_1:9262620-9262639 | Msa0006390:intron | 25.0% |
| ! | GATGATTACTATGTATTTCA+GGG | + | chr1_1:9262621-9262640 | Msa0006390:intron | 25.0% |
| ! | ATTTCTTCAAAAGACAAAAG+TGG | + | chr1_1:9262817-9262836 | Msa0006390:CDS | 25.0% |
| ! | ATAAAAGAGAAAAGTCAAAG+GGG | - | chr1_1:9262921-9262940 | None:intergenic | 25.0% |
| ! | ACTCATATTATATGTTGCTA+GGG | - | chr1_1:9262971-9262990 | None:intergenic | 25.0% |
| ! | TACTCATATTATATGTTGCT+AGG | - | chr1_1:9262972-9262991 | None:intergenic | 25.0% |
| !! | TCTTTGTTATATCTTCTGTT+TGG | + | chr1_1:9263033-9263052 | Msa0006390:intron | 25.0% |
| !! | TTCAAGCAAGCATATATTTT+TGG | + | chr1_1:9263211-9263230 | Msa0006390:three_prime_UTR | 25.0% |
| ! | ACTTTGATTCAACTTATTCA+AGG | - | chr1_1:9263345-9263364 | None:intergenic | 25.0% |
| TTCCTCTTCACAACAAAAAA+TGG | + | chr1_1:9259467-9259486 | Msa0006390:exon | 30.0% | |
| TCAACAACTTCTCCAATTTA+AGG | + | chr1_1:9259660-9259679 | Msa0006390:CDS | 30.0% | |
| CAACAACTTCTCCAATTTAA+GGG | + | chr1_1:9259661-9259680 | Msa0006390:CDS | 30.0% | |
| GGGTGTGTATATATAATATG+AGG | + | chr1_1:9259681-9259700 | Msa0006390:intron | 30.0% | |
| !!! | TTATTTTTGTCTTAACCCTC+CGG | - | chr1_1:9260313-9260332 | None:intergenic | 30.0% |
| AGAGTTAACAAGTTAACATC+AGG | - | chr1_1:9260359-9260378 | None:intergenic | 30.0% | |
| TTGGTTAATTAGGATTTAGG+AGG | + | chr1_1:9260436-9260455 | Msa0006390:intron | 30.0% | |
| TTCACAACATTAAGCACATA+TGG | - | chr1_1:9260700-9260719 | None:intergenic | 30.0% | |
| TGTGCTTAATGTTGTGAAAA+AGG | + | chr1_1:9260702-9260721 | Msa0006390:CDS | 30.0% | |
| AAGAAATCAATACATGACAC+GGG | - | chr1_1:9260765-9260784 | None:intergenic | 30.0% | |
| ! | TTATTGACTGTGATTTCACT+TGG | + | chr1_1:9260960-9260979 | Msa0006390:intron | 30.0% |
| ! | TTTTGATATCAAATCCTACG+TGG | + | chr1_1:9261281-9261300 | Msa0006390:CDS | 30.0% |
| TTTGATATCAAATCCTACGT+GGG | + | chr1_1:9261282-9261301 | Msa0006390:CDS | 30.0% | |
| !! | CACTTTCTAAATAATGGATG+AGG | - | chr1_1:9261516-9261535 | None:intergenic | 30.0% |
| ! | TTTAGTTCATCTTGTAGTGA+AGG | + | chr1_1:9261637-9261656 | Msa0006390:intron | 30.0% |
| CAACATCAAAAAATGGAAAG+TGG | - | chr1_1:9261871-9261890 | None:intergenic | 30.0% | |
| TGGTAAGCAACATCAAAAAA+TGG | - | chr1_1:9261878-9261897 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGATGTTGCTTACC+AGG | + | chr1_1:9261877-9261896 | Msa0006390:CDS | 30.0% |
| AACTGCTCGTTAAAAATTTC+AGG | + | chr1_1:9262073-9262092 | Msa0006390:intron | 30.0% | |
| ACTGCTCGTTAAAAATTTCA+GGG | + | chr1_1:9262074-9262093 | Msa0006390:intron | 30.0% | |
| ! | TAGGGAATAAATTTTACGAC+AGG | + | chr1_1:9262388-9262407 | Msa0006390:intron | 30.0% |
| AAGTTCATTTCAACTCATTC+AGG | - | chr1_1:9262482-9262501 | None:intergenic | 30.0% | |
| TACTATAGCATACATTGCAT+TGG | - | chr1_1:9262569-9262588 | None:intergenic | 30.0% | |
| AGGATTGTTGCTAATATTGT+TGG | + | chr1_1:9262706-9262725 | Msa0006390:CDS | 30.0% | |
| GGATTGTTGCTAATATTGTT+GGG | + | chr1_1:9262707-9262726 | Msa0006390:CDS | 30.0% | |
| AAGGATAAAAACTGTTAGAC+AGG | + | chr1_1:9262780-9262799 | Msa0006390:CDS | 30.0% | |
| TTCAAAAGACAAAAGTGGAA+AGG | + | chr1_1:9262822-9262841 | Msa0006390:CDS | 30.0% | |
| TCATTCATACTTAAGCAGAT+AGG | + | chr1_1:9262850-9262869 | Msa0006390:CDS | 30.0% | |
| GTGACAATATGACAAATAAG+TGG | + | chr1_1:9263061-9263080 | Msa0006390:CDS | 30.0% | |
| CATATATACATGACAAAGGA+TGG | + | chr1_1:9263084-9263103 | Msa0006390:CDS | 30.0% | |
| ATGTGTCAATCACTATGATT+TGG | - | chr1_1:9263248-9263267 | None:intergenic | 30.0% | |
| GTTACAACATGATTTCCAAA+GGG | - | chr1_1:9263323-9263342 | None:intergenic | 30.0% | |
| ACTGTTTCATCTATTGACAT+TGG | - | chr1_1:9263505-9263524 | None:intergenic | 30.0% | |
| GTCAATAGATGAAACAGTTA+CGG | + | chr1_1:9263507-9263526 | Msa0006390:three_prime_UTR | 30.0% | |
| ATGATTCACGTACATTGATA+TGG | + | chr1_1:9263546-9263565 | Msa0006390:three_prime_UTR | 30.0% | |
| AACAGAAAGAGTTGCGAAAA+TGG | - | chr1_1:9259431-9259450 | None:intergenic | 35.0% | |
| !!! | TGCCATTTTTTGTTGTGAAG+AGG | - | chr1_1:9259472-9259491 | None:intergenic | 35.0% |
| GGAACATAATTAACAACAGC+TGG | - | chr1_1:9259955-9259974 | None:intergenic | 35.0% | |
| GAATTGTAAAACCAAGTGGT+TGG | + | chr1_1:9260146-9260165 | Msa0006390:intron | 35.0% | |
| GATCAACAATTGTTTCAGTC+AGG | - | chr1_1:9260231-9260250 | None:intergenic | 35.0% | |
| GTTAATTAGGATTTAGGAGG+TGG | + | chr1_1:9260439-9260458 | Msa0006390:intron | 35.0% | |
| ATGAAATTGATCAGGGTAGT+AGG | - | chr1_1:9260466-9260485 | None:intergenic | 35.0% | |
| ACACGCAATGAAATTGATCA+GGG | - | chr1_1:9260473-9260492 | None:intergenic | 35.0% | |
| TGTTTATTCAGTCATCTGGT+CGG | + | chr1_1:9260518-9260537 | Msa0006390:intron | 35.0% | |
| ! | ACTAATGTTTCTCGGTTTGA+GGG | + | chr1_1:9260559-9260578 | Msa0006390:CDS | 35.0% |
| TCAACTGAAAAAATAGCCTC+AGG | - | chr1_1:9260809-9260828 | None:intergenic | 35.0% | |
| TTAGGCAGAAAATCTTATGC+TGG | + | chr1_1:9260860-9260879 | Msa0006390:intron | 35.0% | |
| AAAATCTTATGCTGGAGAGA+GGG | + | chr1_1:9260868-9260887 | Msa0006390:CDS | 35.0% | |
| ! | AAACAGCAAAGAGTATGTAG+TGG | + | chr1_1:9261069-9261088 | Msa0006390:intron | 35.0% |
| ! | TTTCTCTCTCCTTTTTACTC+AGG | + | chr1_1:9261174-9261193 | Msa0006390:intron | 35.0% |
| ! | CTGATAGAACGATATTTTCC+TGG | + | chr1_1:9261250-9261269 | Msa0006390:CDS | 35.0% |
| ! | GATATCAAAACTTTTGCTCC+AGG | - | chr1_1:9261271-9261290 | None:intergenic | 35.0% |
| TTGATATCAAATCCTACGTG+GGG | + | chr1_1:9261283-9261302 | Msa0006390:CDS | 35.0% | |
| ATTCCTTTCTCGGTTTAACT+TGG | + | chr1_1:9261316-9261335 | Msa0006390:intron | 35.0% | |
| TGGTCATGATATTTGTTTCG+AGG | + | chr1_1:9261336-9261355 | Msa0006390:intron | 35.0% | |
| GGTCATGATATTTGTTTCGA+GGG | + | chr1_1:9261337-9261356 | Msa0006390:intron | 35.0% | |
| ! | AGGTAACATTTTTGTCTTGC+AGG | + | chr1_1:9261374-9261393 | Msa0006390:intron | 35.0% |
| GGGCATGATAGAAGATATAA+AGG | + | chr1_1:9261484-9261503 | Msa0006390:CDS | 35.0% | |
| GTGAATTCATGTTCTTCTGT+TGG | - | chr1_1:9261663-9261682 | None:intergenic | 35.0% | |
| !!! | ACATTTTTTATAGTCGGCTC+CGG | + | chr1_1:9261742-9261761 | Msa0006390:intron | 35.0% |
| TTTACCAAAGATTGTGTACC+TGG | - | chr1_1:9261898-9261917 | None:intergenic | 35.0% | |
| AAACCTTACAACGAATGAAG+CGG | + | chr1_1:9261990-9262009 | Msa0006390:intron | 35.0% | |
| ! | AAATTTCAGGGTTTTGCTAG+TGG | + | chr1_1:9262086-9262105 | Msa0006390:intron | 35.0% |
| CAGTCATACAGTAAAAACCT+CGG | + | chr1_1:9262176-9262195 | Msa0006390:CDS | 35.0% | |
| TGAATTCTGATTCCTTCTCT+AGG | + | chr1_1:9262331-9262350 | Msa0006390:intron | 35.0% | |
| ! | TTTTACGACAGGCATTTTGT+AGG | + | chr1_1:9262399-9262418 | Msa0006390:intron | 35.0% |
| CTATAGTAAACGTTCTGTCT+TGG | + | chr1_1:9262581-9262600 | Msa0006390:intron | 35.0% | |
| GGGTAAAGAGTCAATTGAAA+AGG | + | chr1_1:9262641-9262660 | Msa0006390:intron | 35.0% | |
| TGATGAATGGAAAGCAGAAA+TGG | + | chr1_1:9262744-9262763 | Msa0006390:CDS | 35.0% | |
| GAAAGCAGAAATGGAAATGA+TGG | + | chr1_1:9262753-9262772 | Msa0006390:CDS | 35.0% | |
| AAGACAAAAGTGGAAAGGAT+TGG | + | chr1_1:9262827-9262846 | Msa0006390:CDS | 35.0% | |
| GTGGCATATATACATGACAA+AGG | + | chr1_1:9263080-9263099 | Msa0006390:CDS | 35.0% | |
| TATACATGACAAAGGATGGA+AGG | + | chr1_1:9263088-9263107 | Msa0006390:CDS | 35.0% | |
| ! | ATCTGCAAGGTATTCACATT+TGG | - | chr1_1:9263139-9263158 | None:intergenic | 35.0% |
| AATCGATAATAGCATCTGCA+AGG | - | chr1_1:9263152-9263171 | None:intergenic | 35.0% | |
| ATGATTTCCAAAGGGACTTT+GGG | - | chr1_1:9263315-9263334 | None:intergenic | 35.0% | |
| GGTTACAACATGATTTCCAA+AGG | - | chr1_1:9263324-9263343 | None:intergenic | 35.0% | |
| !! | CGTTATCGGTTCTTCAAAAT+TGG | + | chr1_1:9263474-9263493 | Msa0006390:three_prime_UTR | 35.0% |
| ! | CTCTTTCTGTTGCGTTGTTT+TGG | + | chr1_1:9259440-9259459 | Msa0006390:five_prime_UTR | 40.0% |
| CATACACAGAACCTTGATGT+TGG | - | chr1_1:9259553-9259572 | None:intergenic | 40.0% | |
| AATTGCTTGATCCAACCACT+TGG | - | chr1_1:9260160-9260179 | None:intergenic | 40.0% | |
| GTGGTTGGATCAAGCAATTA+AGG | + | chr1_1:9260161-9260180 | Msa0006390:intron | 40.0% | |
| AGTCAGACTTTACATACCTC+CGG | + | chr1_1:9260253-9260272 | Msa0006390:intron | 40.0% | |
| CACACGCAATGAAATTGATC+AGG | - | chr1_1:9260474-9260493 | None:intergenic | 40.0% | |
| CTGTTGCGACTAATGTTTCT+CGG | + | chr1_1:9260551-9260570 | Msa0006390:CDS | 40.0% | |
| ! | GACTAATGTTTCTCGGTTTG+AGG | + | chr1_1:9260558-9260577 | Msa0006390:CDS | 40.0% |
| GAAACTCCAAGAATTGGATC+AGG | - | chr1_1:9260601-9260620 | None:intergenic | 40.0% | |
| GCTTCAGAAACTCCAAGAAT+TGG | - | chr1_1:9260607-9260626 | None:intergenic | 40.0% | |
| TCAAGCTCAATCTTGGAGTT+GGG | + | chr1_1:9260650-9260669 | Msa0006390:CDS | 40.0% | |
| TTGTAGTTCTTCCGTTCTGT+AGG | - | chr1_1:9260677-9260696 | None:intergenic | 40.0% | |
| ACTTCTTGTTCAGAAACCTG+AGG | + | chr1_1:9260790-9260809 | Msa0006390:intron | 40.0% | |
| GAAAATCTTATGCTGGAGAG+AGG | + | chr1_1:9260867-9260886 | Msa0006390:CDS | 40.0% | |
| AAATCTTATGCTGGAGAGAG+GGG | + | chr1_1:9260869-9260888 | Msa0006390:CDS | 40.0% | |
| !! | ACTCTTTGCTGTTTGATTGC+TGG | - | chr1_1:9261063-9261082 | None:intergenic | 40.0% |
| ATAAAATTCACACCCCACGT+AGG | - | chr1_1:9261298-9261317 | None:intergenic | 40.0% | |
| TGACCAAGTTAAACCGAGAA+AGG | - | chr1_1:9261322-9261341 | None:intergenic | 40.0% | |
| AGTAGCACAAAAGTTCCTTC+CGG | - | chr1_1:9261764-9261783 | None:intergenic | 40.0% | |
| !!! | GGAACTTTTGTGCTACTTCA+TGG | + | chr1_1:9261767-9261786 | Msa0006390:CDS | 40.0% |
| GTGTTGGATCAATACCAGTA+GGG | - | chr1_1:9261805-9261824 | None:intergenic | 40.0% | |
| CTTACCAGGTACACAATCTT+TGG | + | chr1_1:9261891-9261910 | Msa0006390:intron | 40.0% | |
| TATCCGCTTCATTCGTTGTA+AGG | - | chr1_1:9261996-9262015 | None:intergenic | 40.0% | |
| GTGAGATTGTTTGTATCACG+TGG | + | chr1_1:9262134-9262153 | Msa0006390:CDS | 40.0% | |
| ATTGTTTGTATCACGTGGCA+TGG | + | chr1_1:9262139-9262158 | Msa0006390:CDS | 40.0% | |
| TTCTGATTCCTTCTCTAGGT+AGG | + | chr1_1:9262335-9262354 | Msa0006390:intron | 40.0% | |
| !! | ACTGGTGGATTAGAGTACAT+TGG | - | chr1_1:9262676-9262695 | None:intergenic | 40.0% |
| TACTCTAATCCACCAGTTCA+CGG | + | chr1_1:9262679-9262698 | Msa0006390:CDS | 40.0% | |
| TTCCATTCATCAAAGAGAGC+TGG | - | chr1_1:9262736-9262755 | None:intergenic | 40.0% | |
| AAATGGAAATGATGGCTGGA+AGG | + | chr1_1:9262761-9262780 | Msa0006390:CDS | 40.0% | |
| GATAGGCATGTTCTCATTCA+CGG | + | chr1_1:9262867-9262886 | Msa0006390:CDS | 40.0% | |
| ATAGGCATGTTCTCATTCAC+GGG | + | chr1_1:9262868-9262887 | Msa0006390:CDS | 40.0% | |
| GTTGCTAGGGTCAAAGAAAT+AGG | - | chr1_1:9262958-9262977 | None:intergenic | 40.0% | |
| ATATGTACCCAAAGTCCCTT+TGG | + | chr1_1:9263305-9263324 | Msa0006390:three_prime_UTR | 40.0% | |
| CATGATTTCCAAAGGGACTT+TGG | - | chr1_1:9263316-9263335 | None:intergenic | 40.0% | |
| TGAAGCAGAGTGTGAAGGTA+CGG | - | chr1_1:9259514-9259533 | None:intergenic | 45.0% | |
| GAAAGTGAAGCAGAGTGTGA+AGG | - | chr1_1:9259519-9259538 | None:intergenic | 45.0% | |
| CAACAGGGAAAGCTTAAGCT+TGG | + | chr1_1:9259635-9259654 | Msa0006390:intron | 45.0% | |
| ! | TCGGTTTGAGGGTATACCAA+TGG | + | chr1_1:9260570-9260589 | Msa0006390:CDS | 45.0% |
| ACTCCAAGAATTGGATCAGG+AGG | - | chr1_1:9260598-9260617 | None:intergenic | 45.0% | |
| AGCGATGTCAAGCTCAATCT+TGG | + | chr1_1:9260643-9260662 | Msa0006390:CDS | 45.0% | |
| GTCAAGCTCAATCTTGGAGT+TGG | + | chr1_1:9260649-9260668 | Msa0006390:CDS | 45.0% | |
| CAAGCTCAATCTTGGAGTTG+GGG | + | chr1_1:9260651-9260670 | Msa0006390:CDS | 45.0% | |
| ATTGCAGTATCTCCCCATTG+AGG | + | chr1_1:9260984-9261003 | Msa0006390:intron | 45.0% | |
| TTGCAGTATCTCCCCATTGA+GGG | + | chr1_1:9260985-9261004 | Msa0006390:intron | 45.0% | |
| AATGCAGCCAAACCCTCAAT+GGG | - | chr1_1:9261000-9261019 | None:intergenic | 45.0% | |
| AAATGCAGCCAAACCCTCAA+TGG | - | chr1_1:9261001-9261020 | None:intergenic | 45.0% | |
| GGGTTTGGCTGCATTTAACA+AGG | + | chr1_1:9261005-9261024 | Msa0006390:CDS | 45.0% | |
| CAGTGGCAACCTGAGTAAAA+AGG | - | chr1_1:9261186-9261205 | None:intergenic | 45.0% | |
| AACCAGTTCCTGAAAGACCT+TGG | - | chr1_1:9261210-9261229 | None:intergenic | 45.0% | |
| !! | TAGTATCGGTACTCAGACCA+TGG | - | chr1_1:9261434-9261453 | None:intergenic | 45.0% |
| AAATCCAAGCCAACCGTCTT+GGG | - | chr1_1:9261461-9261480 | None:intergenic | 45.0% | |
| AAAATCCAAGCCAACCGTCT+TGG | - | chr1_1:9261462-9261481 | None:intergenic | 45.0% | |
| !!! | ACGGTTGGCTTGGATTTTGA+GGG | + | chr1_1:9261464-9261483 | Msa0006390:CDS | 45.0% |
| !! | TTTTTATAGTCGGCTCCGGA+AGG | + | chr1_1:9261746-9261765 | Msa0006390:intron | 45.0% |
| ! | GGTGTTGGATCAATACCAGT+AGG | - | chr1_1:9261806-9261825 | None:intergenic | 45.0% |
| !!! | GCTATTTTTTCCCACTGCTC+TGG | - | chr1_1:9261827-9261846 | None:intergenic | 45.0% |
| AAGCGGATACAGCATGAAAC+CGG | + | chr1_1:9262007-9262026 | Msa0006390:intron | 45.0% | |
| GGTTACTGCACGATATCTTC+CGG | - | chr1_1:9262029-9262048 | None:intergenic | 45.0% | |
| CTCCAACCCTTTCAGCATAA+AGG | - | chr1_1:9262202-9262221 | None:intergenic | 45.0% | |
| ! | TGTTGCAGATTCTGGTGATG+AGG | - | chr1_1:9262240-9262259 | None:intergenic | 45.0% |
| CATCACCAGAATCTGCAACA+AGG | + | chr1_1:9262240-9262259 | Msa0006390:CDS | 45.0% | |
| CAACACCTTGTTGCAGATTC+TGG | - | chr1_1:9262248-9262267 | None:intergenic | 45.0% | |
| TTCCTTCTCTAGGTAGGTGA+AGG | + | chr1_1:9262341-9262360 | Msa0006390:intron | 45.0% | |
| ATCCTTCACCTACCTAGAGA+AGG | - | chr1_1:9262346-9262365 | None:intergenic | 45.0% | |
| ACTCTAATCCACCAGTTCAC+GGG | + | chr1_1:9262680-9262699 | Msa0006390:CDS | 45.0% | |
| CTCCAGCTCTCTTTGATGAA+TGG | + | chr1_1:9262731-9262750 | Msa0006390:CDS | 45.0% | |
| GCAGAAATGGAAATGATGGC+TGG | + | chr1_1:9262757-9262776 | Msa0006390:CDS | 45.0% | |
| CAAAGGGGAAGTCAAAAACC+TGG | - | chr1_1:9262906-9262925 | None:intergenic | 45.0% | |
| AAAGGATGGAAGGATTTCCC+TGG | + | chr1_1:9263098-9263117 | Msa0006390:CDS | 45.0% | |
| GGATTCAAATCCTGCCTTCA+AGG | + | chr1_1:9263567-9263586 | Msa0006390:three_prime_UTR | 45.0% | |
| GATCCTCGACACCAACATCA+AGG | + | chr1_1:9259539-9259558 | Msa0006390:CDS | 50.0% | |
| !! | GAACCTTGATGTTGGTGTCG+AGG | - | chr1_1:9259545-9259564 | None:intergenic | 50.0% |
| CTCCGGACATCAGATTACCA+GGG | + | chr1_1:9260270-9260289 | Msa0006390:intron | 50.0% | |
| CACCCTGGTAATCTGATGTC+CGG | - | chr1_1:9260275-9260294 | None:intergenic | 50.0% | |
| !! | TTACCAGGGTGCTTTTCCTC+TGG | + | chr1_1:9260284-9260303 | Msa0006390:intron | 50.0% |
| !! | TTTCCAGAGGAAAAGCACCC+TGG | - | chr1_1:9260290-9260309 | None:intergenic | 50.0% |
| !! | GGTGCTTTTCCTCTGGAAAC+CGG | + | chr1_1:9260291-9260310 | Msa0006390:intron | 50.0% |
| !! | CTTTTCCTCTGGAAACCGGA+GGG | + | chr1_1:9260295-9260314 | Msa0006390:intron | 50.0% |
| GTCATCTGGTCGGATCTGTA+TGG | + | chr1_1:9260528-9260547 | Msa0006390:intron | 50.0% | |
| ATTGGATCAGGAGGAGCCAT+TGG | - | chr1_1:9260589-9260608 | None:intergenic | 50.0% | |
| GCTCCTCCTGATCCAATTCT+TGG | + | chr1_1:9260592-9260611 | Msa0006390:CDS | 50.0% | |
| GGAGAGAGGGGAAAACAAAG+AGG | + | chr1_1:9260881-9260900 | Msa0006390:CDS | 50.0% | |
| GTATCTCCCCATTGAGGGTT+TGG | + | chr1_1:9260990-9261009 | Msa0006390:intron | 50.0% | |
| ATGCAGCCAAACCCTCAATG+GGG | - | chr1_1:9260999-9261018 | None:intergenic | 50.0% | |
| GCAACTGCAGAGTTGTTGCT+CGG | + | chr1_1:9261027-9261046 | Msa0006390:CDS | 50.0% | |
| TCCTGAAAGACCTTGGACAG+TGG | - | chr1_1:9261203-9261222 | None:intergenic | 50.0% | |
| GTCCAAGGTCTTTCAGGAAC+TGG | + | chr1_1:9261205-9261224 | Msa0006390:CDS | 50.0% | |
| CGAGGGAATTCGTACATCGT+AGG | + | chr1_1:9261354-9261373 | Msa0006390:intron | 50.0% | |
| TCAACGATGCTCGAGTACCA+TGG | + | chr1_1:9261414-9261433 | Msa0006390:CDS | 50.0% | |
| CCGTCTTGGGGTCATAGTAT+CGG | - | chr1_1:9261448-9261467 | None:intergenic | 50.0% | |
| CCGATACTATGACCCCAAGA+CGG | + | chr1_1:9261445-9261464 | Msa0006390:CDS | 50.0% | |
| TACTATGACCCCAAGACGGT+TGG | + | chr1_1:9261449-9261468 | Msa0006390:CDS | 50.0% | |
| AATCCAAGCCAACCGTCTTG+GGG | - | chr1_1:9261460-9261479 | None:intergenic | 50.0% | |
| !!! | GACGGTTGGCTTGGATTTTG+AGG | + | chr1_1:9261463-9261482 | Msa0006390:CDS | 50.0% |
| GGATGTGCACATAACCCTAC+TGG | + | chr1_1:9261788-9261807 | Msa0006390:CDS | 50.0% | |
| TTGATCCAACACCAGAGCAG+TGG | + | chr1_1:9261813-9261832 | Msa0006390:CDS | 50.0% | |
| TGATCCAACACCAGAGCAGT+GGG | + | chr1_1:9261814-9261833 | Msa0006390:CDS | 50.0% | |
| ! | TTTTCCCACTGCTCTGGTGT+TGG | - | chr1_1:9261821-9261840 | None:intergenic | 50.0% |
| TGGAAGCCTTGACGAAGATG+CGG | + | chr1_1:9262106-9262125 | Msa0006390:CDS | 50.0% | |
| GTTTGTATCACGTGGCATGG+AGG | + | chr1_1:9262142-9262161 | Msa0006390:CDS | 50.0% | |
| ACCTCGGCCTTTATGCTGAA+AGG | + | chr1_1:9262192-9262211 | Msa0006390:CDS | 50.0% | |
| CCTCGGCCTTTATGCTGAAA+GGG | + | chr1_1:9262193-9262212 | Msa0006390:CDS | 50.0% | |
| GGCCTTTATGCTGAAAGGGT+TGG | + | chr1_1:9262197-9262216 | Msa0006390:CDS | 50.0% | |
| CTCTAATCCACCAGTTCACG+GGG | + | chr1_1:9262681-9262700 | Msa0006390:CDS | 50.0% | |
| ! | AGCAGAGTGTGAAGGTACGG+AGG | - | chr1_1:9259511-9259530 | None:intergenic | 55.0% |
| CAGTTGCGCGTAGAGATAGC+TGG | + | chr1_1:9259914-9259933 | Msa0006390:intron | 55.0% | |
| CCTGGTAATCTGATGTCCGG+AGG | - | chr1_1:9260272-9260291 | None:intergenic | 55.0% | |
| CCTCCGGACATCAGATTACC+AGG | + | chr1_1:9260269-9260288 | Msa0006390:intron | 55.0% | |
| !! | GCTTTTCCTCTGGAAACCGG+AGG | + | chr1_1:9260294-9260313 | Msa0006390:intron | 55.0% |
| CTTAACCCTCCGGTTTCCAG+AGG | - | chr1_1:9260303-9260322 | None:intergenic | 55.0% | |
| TGGAGTTGGGGCCTACAGAA+CGG | + | chr1_1:9260663-9260682 | Msa0006390:CDS | 55.0% | |
| ! | ACTCAGGTTGCCACTGTCCA+AGG | + | chr1_1:9261190-9261209 | Msa0006390:intron | 55.0% |
| GCCACTGTCCAAGGTCTTTC+AGG | + | chr1_1:9261199-9261218 | Msa0006390:CDS | 55.0% | |
| ! | GGAACTGGTTCTCTGCGACT+AGG | + | chr1_1:9261220-9261239 | Msa0006390:CDS | 55.0% |
| CAGAAGCCGCATCTTCGTCA+AGG | - | chr1_1:9262115-9262134 | None:intergenic | 55.0% | |
| CCCTTTCAGCATAAAGGCCG+AGG | - | chr1_1:9262196-9262215 | None:intergenic | 55.0% | |
| ACAATCCTAGCCCCGTGAAC+TGG | - | chr1_1:9262694-9262713 | None:intergenic | 55.0% | |
| GATGGAAGGATTTCCCTGGC+AGG | + | chr1_1:9263102-9263121 | Msa0006390:CDS | 55.0% | |
| ! | TGACCCCAAGACGGTTGGCT+TGG | + | chr1_1:9261454-9261473 | Msa0006390:CDS | 60.0% |
| ATCCACCAGTTCACGGGGCT+AGG | + | chr1_1:9262686-9262705 | Msa0006390:CDS | 60.0% | |
| ATCCTAGCCCCGTGAACTGG+TGG | - | chr1_1:9262691-9262710 | None:intergenic | 60.0% | |
| CACGGGCTTGAACAAGAGCC+AGG | + | chr1_1:9262885-9262904 | Msa0006390:CDS | 60.0% | |
| TTCCCTGGCAGGATTGTCGC+TGG | + | chr1_1:9263113-9263132 | Msa0006390:CDS | 60.0% | |
| GGCCAGCGACAATCCTGCCA+GGG | - | chr1_1:9263118-9263137 | None:intergenic | 65.0% | |
| TGGCCAGCGACAATCCTGCC+AGG | - | chr1_1:9263119-9263138 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 9259298 | 9263591 | 9259298 | ID=Msa0006390;Name=Msa0006390 |
| chr1_1 | mRNA | 9259298 | 9263591 | 9259298 | ID=Msa0006390-mRNA-1;Parent=Msa0006390;Name=Msa0006390-mRNA-1;_AED=0.09;_eAED=0.09;_QI=188|1|1|1|1|1|11|400|455 |
| chr1_1 | exon | 9259298 | 9259560 | 9259298 | ID=Msa0006390-mRNA-1:exon:3265;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9259641 | 9259682 | 9259641 | ID=Msa0006390-mRNA-1:exon:3266;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9260529 | 9260723 | 9260529 | ID=Msa0006390-mRNA-1:exon:3267;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9260864 | 9260902 | 9260864 | ID=Msa0006390-mRNA-1:exon:3268;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9260991 | 9261080 | 9260991 | ID=Msa0006390-mRNA-1:exon:3269;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9261196 | 9261304 | 9261196 | ID=Msa0006390-mRNA-1:exon:3270;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9261396 | 9261505 | 9261396 | ID=Msa0006390-mRNA-1:exon:3271;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9261755 | 9261898 | 9261755 | ID=Msa0006390-mRNA-1:exon:3272;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9262095 | 9262261 | 9262095 | ID=Msa0006390-mRNA-1:exon:3273;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9262642 | 9262906 | 9262642 | ID=Msa0006390-mRNA-1:exon:3274;Parent=Msa0006390-mRNA-1 |
| chr1_1 | exon | 9263060 | 9263591 | 9263060 | ID=Msa0006390-mRNA-1:exon:3275;Parent=Msa0006390-mRNA-1 |
| chr1_1 | five_prime_UTR | 9259298 | 9259485 | 9259298 | ID=Msa0006390-mRNA-1:five_prime_utr;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9259486 | 9259560 | 9259486 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9259641 | 9259682 | 9259641 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9260529 | 9260723 | 9260529 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9260864 | 9260902 | 9260864 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9260991 | 9261080 | 9260991 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9261196 | 9261304 | 9261196 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9261396 | 9261505 | 9261396 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9261755 | 9261898 | 9261755 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9262095 | 9262261 | 9262095 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9262642 | 9262906 | 9262642 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | CDS | 9263060 | 9263191 | 9263060 | ID=Msa0006390-mRNA-1:cds;Parent=Msa0006390-mRNA-1 |
| chr1_1 | three_prime_UTR | 9263192 | 9263591 | 9263192 | ID=Msa0006390-mRNA-1:three_prime_utr;Parent=Msa0006390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
