Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442450 | sp|P0C7R4|PP110_ARATH | 61.011 | 277 | 57 | 3 | 12 | 237 | 382 | 658 | 6.24e-108 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442450 | G7JZ42 | 80.364 | 275 | 5 | 1 | 12 | 237 | 386 | 660 | 1.85e-147 | 435 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1442450 | -0.803871 | 2.834005e-49 | -8.615850e-47 |
| Msa0006110 | Msa1442450 | 0.808246 | 3.402652e-50 | -8.615850e-47 |
| Msa0015390 | Msa1442450 | 0.815656 | 8.268946e-52 | -8.615850e-47 |
| Msa0017510 | Msa1442450 | 0.843214 | 1.607604e-58 | -8.615850e-47 |
| Msa0028640 | Msa1442450 | 0.805629 | 1.217118e-49 | -8.615850e-47 |
| Msa0031340 | Msa1442450 | 0.805496 | 1.297959e-49 | -8.615850e-47 |
| Msa0033440 | Msa1442450 | 0.816717 | 4.789052e-52 | -8.615850e-47 |
| Msa0095560 | Msa1442450 | 0.813609 | 2.346777e-51 | -8.615850e-47 |
| Msa0096450 | Msa1442450 | 0.802260 | 6.103944e-49 | -8.615850e-47 |
| Msa0110970 | Msa1442450 | 0.812786 | 3.557983e-51 | -8.615850e-47 |
| Msa0114060 | Msa1442450 | 0.803747 | 3.008048e-49 | -8.615850e-47 |
| Msa1346370 | Msa1442450 | 0.817841 | 2.674879e-52 | -8.615850e-47 |
| Msa1353470 | Msa1442450 | 0.808675 | 2.756723e-50 | -8.615850e-47 |
| Msa1357530 | Msa1442450 | 0.811042 | 8.533926e-51 | -8.615850e-47 |
| Msa1359040 | Msa1442450 | 0.825612 | 4.263939e-54 | -8.615850e-47 |
| Msa1372760 | Msa1442450 | 0.841203 | 5.480025e-58 | -8.615850e-47 |
| Msa1384350 | Msa1442450 | 0.834159 | 3.521564e-56 | -8.615850e-47 |
| Msa1390050 | Msa1442450 | 0.821998 | 2.996464e-53 | -8.615850e-47 |
| Msa1392260 | Msa1442450 | 0.816276 | 6.012820e-52 | -8.615850e-47 |
| Msa1393040 | Msa1442450 | 0.808130 | 3.602392e-50 | -8.615850e-47 |
| Msa1397860 | Msa1442450 | 0.800522 | 1.385261e-48 | -8.615850e-47 |
| Msa1411020 | Msa1442450 | 0.823065 | 1.692326e-53 | -8.615850e-47 |
| Msa1420290 | Msa1442450 | 0.801118 | 1.047020e-48 | -8.615850e-47 |
| Msa1423870 | Msa1442450 | 0.802830 | 4.657938e-49 | -8.615850e-47 |
| Msa1423880 | Msa1442450 | 0.819858 | 9.314380e-53 | -8.615850e-47 |
| Msa1424290 | Msa1442450 | 0.817864 | 2.643726e-52 | -8.615850e-47 |
| Msa1429900 | Msa1442450 | 0.810528 | 1.102048e-50 | -8.615850e-47 |
| Msa1434350 | Msa1442450 | 0.818899 | 1.540884e-52 | -8.615850e-47 |
| Msa1439320 | Msa1442450 | 0.827613 | 1.420602e-54 | -8.615850e-47 |
| Msa1442450 | Msa1445030 | 0.800281 | 1.551440e-48 | -8.615850e-47 |
| Msa1442450 | Msa1448640 | 0.809518 | 1.819039e-50 | -8.615850e-47 |
| Msa1442450 | Msa1451620 | -0.808619 | 2.833471e-50 | -8.615850e-47 |
| Msa1442450 | Msa1452240 | 0.816751 | 4.706527e-52 | -8.615850e-47 |
| Msa1442450 | Msa1454120 | 0.818809 | 1.615101e-52 | -8.615850e-47 |
| Msa1442450 | Msa1460020 | 0.816626 | 5.019944e-52 | -8.615850e-47 |
| Msa1442450 | Msa1464940 | 0.809015 | 2.331886e-50 | -8.615850e-47 |
| Msa1442450 | Msa1466540 | 0.813946 | 1.978690e-51 | -8.615850e-47 |
| Msa0610430 | Msa1442450 | 0.817274 | 3.590318e-52 | -8.615850e-47 |
| Msa0616160 | Msa1442450 | 0.807304 | 5.396589e-50 | -8.615850e-47 |
| Msa0626090 | Msa1442450 | 0.800126 | 1.668142e-48 | -8.615850e-47 |
| Msa0648880 | Msa1442450 | 0.800017 | 1.755638e-48 | -8.615850e-47 |
| Msa0657970 | Msa1442450 | 0.824164 | 9.359619e-54 | -8.615850e-47 |
| Msa0669320 | Msa1442450 | 0.839583 | 1.452700e-57 | -8.615850e-47 |
| Msa0673460 | Msa1442450 | 0.813077 | 3.072047e-51 | -8.615850e-47 |
| Msa0688480 | Msa1442450 | 0.802046 | 6.754723e-49 | -8.615850e-47 |
| Msa0691380 | Msa1442450 | 0.816180 | 6.316515e-52 | -8.615850e-47 |
| Msa0692230 | Msa1442450 | 0.824747 | 6.827429e-54 | -8.615850e-47 |
| Msa0693380 | Msa1442450 | 0.801988 | 6.944262e-49 | -8.615850e-47 |
| Msa0731940 | Msa1442450 | 0.809616 | 1.733156e-50 | -8.615850e-47 |
| Msa0735170 | Msa1442450 | 0.831204 | 1.905850e-55 | -8.615850e-47 |
| Msa0740510 | Msa1442450 | 0.800344 | 1.506133e-48 | -8.615850e-47 |
| Msa0743720 | Msa1442450 | 0.809437 | 1.892672e-50 | -8.615850e-47 |
| Msa0745790 | Msa1442450 | 0.819028 | 1.440078e-52 | -8.615850e-47 |
| Msa0769920 | Msa1442450 | 0.814114 | 1.816747e-51 | -8.615850e-47 |
| Msa0798430 | Msa1442450 | 0.808678 | 2.752280e-50 | -8.615850e-47 |
| Msa0806090 | Msa1442450 | 0.805200 | 1.497221e-49 | -8.615850e-47 |
| Msa0810220 | Msa1442450 | 0.815109 | 1.093789e-51 | -8.615850e-47 |
| Msa0820770 | Msa1442450 | 0.801924 | 7.157623e-49 | -8.615850e-47 |
| Msa0824680 | Msa1442450 | 0.800600 | 1.335749e-48 | -8.615850e-47 |
| Msa0827040 | Msa1442450 | 0.811429 | 7.032160e-51 | -8.615850e-47 |
| Msa0828560 | Msa1442450 | 0.803109 | 4.078439e-49 | -8.615850e-47 |
| Msa0832370 | Msa1442450 | 0.811203 | 7.874987e-51 | -8.615850e-47 |
| Msa0838580 | Msa1442450 | 0.802774 | 4.781582e-49 | -8.615850e-47 |
| Msa0122590 | Msa1442450 | 0.803459 | 3.451704e-49 | -8.615850e-47 |
| Msa0157290 | Msa1442450 | 0.843816 | 1.110264e-58 | -8.615850e-47 |
| Msa0160550 | Msa1442450 | 0.806634 | 7.477063e-50 | -8.615850e-47 |
| Msa0166870 | Msa1442450 | 0.801613 | 8.291819e-49 | -8.615850e-47 |
| Msa0188830 | Msa1442450 | 0.800907 | 1.156170e-48 | -8.615850e-47 |
| Msa0200260 | Msa1442450 | 0.807231 | 5.592949e-50 | -8.615850e-47 |
| Msa0202950 | Msa1442450 | 0.804726 | 1.881070e-49 | -8.615850e-47 |
| Msa0210450 | Msa1442450 | 0.807578 | 4.720633e-50 | -8.615850e-47 |
| Msa0212990 | Msa1442450 | 0.806838 | 6.771764e-50 | -8.615850e-47 |
| Msa0220580 | Msa1442450 | 0.823801 | 1.138992e-53 | -8.615850e-47 |
| Msa0220740 | Msa1442450 | 0.820788 | 5.698763e-53 | -8.615850e-47 |
| Msa0221060 | Msa1442450 | 0.827830 | 1.259565e-54 | -8.615850e-47 |
| Msa0223690 | Msa1442450 | 0.810206 | 1.293705e-50 | -8.615850e-47 |
| Msa0226890 | Msa1442450 | 0.817862 | 2.645493e-52 | -8.615850e-47 |
| Msa1226660 | Msa1442450 | 0.802215 | 6.235497e-49 | -8.615850e-47 |
| Msa1228210 | Msa1442450 | 0.810127 | 1.345485e-50 | -8.615850e-47 |
| Msa1228590 | Msa1442450 | 0.804955 | 1.684828e-49 | -8.615850e-47 |
| Msa1233890 | Msa1442450 | 0.825009 | 5.919257e-54 | -8.615850e-47 |
| Msa1242220 | Msa1442450 | 0.809707 | 1.656730e-50 | -8.615850e-47 |
| Msa1242230 | Msa1442450 | 0.811584 | 6.509198e-51 | -8.615850e-47 |
| Msa1244250 | Msa1442450 | 0.802709 | 4.932696e-49 | -8.615850e-47 |
| Msa1250890 | Msa1442450 | 0.811101 | 8.284542e-51 | -8.615850e-47 |
| Msa1252140 | Msa1442450 | 0.809246 | 2.079930e-50 | -8.615850e-47 |
| Msa1271300 | Msa1442450 | 0.816601 | 5.084966e-52 | -8.615850e-47 |
| Msa1278840 | Msa1442450 | 0.808658 | 2.780256e-50 | -8.615850e-47 |
| Msa1283860 | Msa1442450 | 0.811033 | 8.570639e-51 | -8.615850e-47 |
| Msa1284260 | Msa1442450 | 0.802129 | 6.494911e-49 | -8.615850e-47 |
| Msa1284680 | Msa1442450 | 0.814651 | 1.381931e-51 | -8.615850e-47 |
| Msa1288420 | Msa1442450 | 0.800279 | 1.552842e-48 | -8.615850e-47 |
| Msa1292760 | Msa1442450 | 0.807179 | 5.736232e-50 | -8.615850e-47 |
| Msa1313140 | Msa1442450 | 0.808656 | 2.782924e-50 | -8.615850e-47 |
| Msa1313150 | Msa1442450 | 0.813945 | 1.979482e-51 | -8.615850e-47 |
| Msa1318240 | Msa1442450 | 0.803468 | 3.436553e-49 | -8.615850e-47 |
| Msa1318990 | Msa1442450 | 0.804989 | 1.657330e-49 | -8.615850e-47 |
| Msa1322860 | Msa1442450 | 0.820487 | 6.682913e-53 | -8.615850e-47 |
| Msa1322890 | Msa1442450 | 0.814496 | 1.495574e-51 | -8.615850e-47 |
| Msa1324500 | Msa1442450 | 0.804028 | 2.628725e-49 | -8.615850e-47 |
| Msa1327050 | Msa1442450 | 0.816056 | 6.732445e-52 | -8.615850e-47 |
| Msa1327680 | Msa1442450 | 0.813191 | 2.900263e-51 | -8.615850e-47 |
| Msa1340650 | Msa1442450 | 0.808992 | 2.357805e-50 | -8.615850e-47 |
| Msa0373930 | Msa1442450 | 0.819668 | 1.029089e-52 | -8.615850e-47 |
| Msa0376350 | Msa1442450 | 0.817457 | 3.265339e-52 | -8.615850e-47 |
| Msa0376590 | Msa1442450 | 0.823320 | 1.475833e-53 | -8.615850e-47 |
| Msa0379640 | Msa1442450 | 0.822485 | 2.309623e-53 | -8.615850e-47 |
| Msa0388950 | Msa1442450 | 0.805207 | 1.492298e-49 | -8.615850e-47 |
| Msa0388960 | Msa1442450 | 0.819808 | 9.560061e-53 | -8.615850e-47 |
| Msa0389340 | Msa1442450 | 0.832600 | 8.617190e-56 | -8.615850e-47 |
| Msa0402290 | Msa1442450 | 0.805320 | 1.413381e-49 | -8.615850e-47 |
| Msa0410650 | Msa1442450 | 0.804690 | 1.914061e-49 | -8.615850e-47 |
| Msa0417270 | Msa1442450 | 0.807747 | 4.346927e-50 | -8.615850e-47 |
| Msa0424790 | Msa1442450 | 0.803578 | 3.260959e-49 | -8.615850e-47 |
| Msa0439970 | Msa1442450 | 0.800918 | 1.150246e-48 | -8.615850e-47 |
| Msa0440750 | Msa1442450 | 0.820812 | 5.628701e-53 | -8.615850e-47 |
| Msa0466390 | Msa1442450 | 0.818158 | 2.267624e-52 | -8.615850e-47 |
| Msa0467060 | Msa1442450 | 0.806891 | 6.598372e-50 | -8.615850e-47 |
| Msa0479970 | Msa1442450 | 0.808224 | 3.440403e-50 | -8.615850e-47 |
| Msa0480980 | Msa1442450 | 0.802547 | 5.328493e-49 | -8.615850e-47 |
| Msa0993290 | Msa1442450 | 0.819705 | 1.009535e-52 | -8.615850e-47 |
| Msa0993600 | Msa1442450 | 0.817831 | 2.688571e-52 | -8.615850e-47 |
| Msa1003620 | Msa1442450 | 0.803841 | 2.875345e-49 | -8.615850e-47 |
| Msa1014540 | Msa1442450 | 0.814212 | 1.728706e-51 | -8.615850e-47 |
| Msa1030970 | Msa1442450 | 0.821404 | 4.110221e-53 | -8.615850e-47 |
| Msa1045200 | Msa1442450 | 0.826375 | 2.807755e-54 | -8.615850e-47 |
| Msa1046460 | Msa1442450 | 0.800142 | 1.655582e-48 | -8.615850e-47 |
| Msa1075220 | Msa1442450 | -0.838718 | 2.435142e-57 | -8.615850e-47 |
| Msa1082500 | Msa1442450 | 0.831353 | 1.751143e-55 | -8.615850e-47 |
| Msa1085200 | Msa1442450 | 0.805617 | 1.224398e-49 | -8.615850e-47 |
| Msa1090260 | Msa1442450 | 0.812076 | 5.084141e-51 | -8.615850e-47 |
| Msa0243710 | Msa1442450 | 0.825309 | 5.029442e-54 | -8.615850e-47 |
| Msa0257460 | Msa1442450 | 0.815228 | 1.029262e-51 | -8.615850e-47 |
| Msa0258760 | Msa1442450 | 0.816719 | 4.783919e-52 | -8.615850e-47 |
| Msa0262520 | Msa1442450 | 0.808506 | 2.995025e-50 | -8.615850e-47 |
| Msa0270100 | Msa1442450 | 0.800946 | 1.135396e-48 | -8.615850e-47 |
| Msa0284420 | Msa1442450 | 0.806211 | 9.182286e-50 | -8.615850e-47 |
| Msa0287650 | Msa1442450 | 0.833615 | 4.818252e-56 | -8.615850e-47 |
| Msa0294950 | Msa1442450 | 0.811434 | 7.013530e-51 | -8.615850e-47 |
| Msa0296560 | Msa1442450 | 0.800487 | 1.408362e-48 | -8.615850e-47 |
| Msa0315290 | Msa1442450 | 0.818967 | 1.486933e-52 | -8.615850e-47 |
| Msa0315530 | Msa1442450 | 0.802894 | 4.516893e-49 | -8.615850e-47 |
| Msa0322690 | Msa1442450 | 0.818984 | 1.473430e-52 | -8.615850e-47 |
| Msa0323080 | Msa1442450 | 0.824797 | 6.642258e-54 | -8.615850e-47 |
| Msa0335040 | Msa1442450 | 0.803597 | 3.231652e-49 | -8.615850e-47 |
| Msa0336420 | Msa1442450 | 0.802602 | 5.189501e-49 | -8.615850e-47 |
| Msa0338110 | Msa1442450 | 0.824433 | 8.094533e-54 | -8.615850e-47 |
| Msa0341540 | Msa1442450 | 0.808497 | 3.008908e-50 | -8.615850e-47 |
| Msa0345970 | Msa1442450 | 0.807407 | 5.132476e-50 | -8.615850e-47 |
| Msa0351810 | Msa1442450 | 0.807485 | 4.940882e-50 | -8.615850e-47 |
| Msa1116130 | Msa1442450 | -0.824808 | 6.602772e-54 | -8.615850e-47 |
| Msa1117660 | Msa1442450 | 0.801413 | 9.112360e-49 | -8.615850e-47 |
| Msa1130270 | Msa1442450 | -0.804561 | 2.035948e-49 | -8.615850e-47 |
| Msa1137570 | Msa1442450 | 0.813040 | 3.130513e-51 | -8.615850e-47 |
| Msa1139000 | Msa1442450 | -0.818459 | 1.939277e-52 | -8.615850e-47 |
| Msa1151910 | Msa1442450 | 0.804915 | 1.717864e-49 | -8.615850e-47 |
| Msa1154280 | Msa1442450 | 0.809948 | 1.469777e-50 | -8.615850e-47 |
| Msa1154710 | Msa1442450 | 0.818692 | 1.716618e-52 | -8.615850e-47 |
| Msa1162550 | Msa1442450 | -0.835912 | 1.273217e-56 | -8.615850e-47 |
| Msa1174040 | Msa1442450 | 0.805170 | 1.518819e-49 | -8.615850e-47 |
| Msa0484780 | Msa1442450 | 0.822581 | 2.193968e-53 | -8.615850e-47 |
| Msa0498060 | Msa1442450 | 0.801244 | 9.866208e-49 | -8.615850e-47 |
| Msa0502880 | Msa1442450 | 0.804842 | 1.779141e-49 | -8.615850e-47 |
| Msa0509610 | Msa1442450 | 0.813504 | 2.475410e-51 | -8.615850e-47 |
| Msa0516170 | Msa1442450 | 0.811053 | 8.487551e-51 | -8.615850e-47 |
| Msa0516370 | Msa1442450 | 0.808388 | 3.173666e-50 | -8.615850e-47 |
| Msa0536220 | Msa1442450 | 0.813168 | 2.934284e-51 | -8.615850e-47 |
| Msa0547890 | Msa1442450 | 0.800818 | 1.205606e-48 | -8.615850e-47 |
| Msa0563840 | Msa1442450 | 0.802445 | 5.592622e-49 | -8.615850e-47 |
| Msa0581760 | Msa1442450 | 0.802006 | 6.885081e-49 | -8.615850e-47 |
| Msa0599890 | Msa1442450 | 0.817302 | 3.538073e-52 | -8.615850e-47 |
| Msa0600430 | Msa1442450 | 0.807268 | 5.492344e-50 | -8.615850e-47 |
| Msa0843780 | Msa1442450 | -0.803350 | 3.635937e-49 | -8.615850e-47 |
| Msa0844240 | Msa1442450 | 0.811467 | 6.900119e-51 | -8.615850e-47 |
| Msa0871270 | Msa1442450 | 0.812223 | 4.722962e-51 | -8.615850e-47 |
| Msa0880140 | Msa1442450 | 0.839796 | 1.278889e-57 | -8.615850e-47 |
| Msa0908050 | Msa1442450 | 0.803836 | 2.882256e-49 | -8.615850e-47 |
| Msa0922410 | Msa1442450 | 0.803776 | 2.966895e-49 | -8.615850e-47 |
| Msa0933100 | Msa1442450 | 0.807650 | 4.556265e-50 | -8.615850e-47 |
| Msa0933230 | Msa1442450 | 0.822500 | 2.291434e-53 | -8.615850e-47 |
| Msa0933310 | Msa1442450 | 0.800529 | 1.380693e-48 | -8.615850e-47 |
| Msa0938220 | Msa1442450 | 0.803973 | 2.699529e-49 | -8.615850e-47 |
| Msa0942200 | Msa1442450 | 0.815532 | 8.811544e-52 | -8.615850e-47 |
| Msa0944030 | Msa1442450 | 0.812831 | 3.478645e-51 | -8.615850e-47 |
| Msa0947660 | Msa1442450 | 0.807242 | 5.563149e-50 | -8.615850e-47 |
| Msa0954130 | Msa1442450 | 0.802110 | 6.553754e-49 | -8.615850e-47 |
| Msa0968680 | Msa1442450 | 0.804447 | 2.151259e-49 | -8.615850e-47 |
| Msa0969520 | Msa1442450 | 0.810906 | 9.131036e-51 | -8.615850e-47 |
| Msa0971090 | Msa1442450 | 0.803490 | 3.400911e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442450 | MtrunA17_Chr5g0419631 | 80.364 | 275 | 5 | 1 | 12 | 237 | 386 | 660 | 3.57e-151 | 435 |
| Msa1442450 | MtrunA17_Chr5g0419341 | 80.000 | 275 | 6 | 1 | 12 | 237 | 390 | 664 | 1.76e-150 | 434 |
| Msa1442450 | MtrunA17_Chr4g0042181 | 27.402 | 281 | 144 | 5 | 12 | 235 | 508 | 785 | 1.75e-29 | 115 |
| Msa1442450 | MtrunA17_Chr1g0181661 | 24.739 | 287 | 153 | 5 | 12 | 235 | 415 | 701 | 5.33e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442450 | AT1G69290.1 | 61.011 | 277 | 57 | 3 | 12 | 237 | 382 | 658 | 6.34e-109 | 327 |
| Msa1442450 | AT1G68980.1 | 52.963 | 270 | 71 | 2 | 13 | 233 | 353 | 615 | 7.33e-88 | 272 |
| Msa1442450 | AT1G03100.1 | 29.078 | 282 | 139 | 7 | 12 | 236 | 516 | 793 | 4.46e-31 | 120 |
| Msa1442450 | AT4G17616.1 | 21.973 | 223 | 147 | 4 | 9 | 210 | 427 | 643 | 8.90e-11 | 61.6 |
Find 58 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAGGCTCTGTGGGTCTT+GGG | 0.176003 | tig0030010:+48998 | Msa1442450:CDS |
| TTGGGAGGCTCTGTGGGTCT+TGG | 0.177689 | tig0030010:+48997 | Msa1442450:CDS |
| TGAAAATATTTGTTGATAAG+TGG | 0.364460 | tig0030010:+49652 | Msa1442450:CDS |
| AACTATAATGACAGGTTTGA+TGG | 0.371868 | tig0030010:+49239 | Msa1442450:CDS |
| CTTGATAAGATGAATGCTTT+GGG | 0.377761 | tig0030010:+48979 | Msa1442450:CDS |
| TCTTGATAAGATGAATGCTT+TGG | 0.380553 | tig0030010:+48978 | Msa1442450:CDS |
| AGCTCAAAGTGGCCAGGTTA+AGG | 0.380872 | tig0030010:+49709 | Msa1442450:CDS |
| GGAATGCATCAATCAGATTC+TGG | 0.383498 | tig0030010:-49563 | Msa1442450:intergenic |
| GTCATGGAGATTAGTAGTTC+AGG | 0.393686 | tig0030010:+49084 | Msa1442450:CDS |
| GAGATACAAGCAAGCGTTCA+TGG | 0.416295 | tig0030010:+49674 | Msa1442450:CDS |
| TGTTTCTATCAAAGCATCAT+AGG | 0.418085 | tig0030010:-49127 | Msa1442450:intergenic |
| GGGAGGCTCTGTGGGTCTTG+GGG | 0.421493 | tig0030010:+48999 | Msa1442450:CDS |
| TGGTCAAATTTGATCCCCTT+CGG | 0.433100 | tig0030010:-49543 | Msa1442450:intergenic |
| AACTGCGGAGGCTACTCTAT+TGG | 0.433212 | tig0030010:+49062 | Msa1442450:CDS |
| CTCTGTTTAGGGACATGAGA+GGG | 0.436667 | tig0030010:+49184 | Msa1442450:CDS |
| ATTAATGCTTGTGTTAGTAT+TGG | 0.447831 | tig0030010:+48933 | None:intergenic |
| GAGGTAAAGAGAAAGTTAGC+AGG | 0.460627 | tig0030010:+49513 | Msa1442450:CDS |
| AATGCTTTGGGAGGCTCTGT+GGG | 0.462220 | tig0030010:+48991 | Msa1442450:CDS |
| GAACCATCGACCTGAGTTGA+TGG | 0.464968 | tig0030010:+49263 | Msa1442450:CDS |
| CGAGGGTTCTTGATTTGAAA+GGG | 0.470046 | tig0030010:+49208 | Msa1442450:CDS |
| AGGTAAAGAGAAAGTTAGCA+GGG | 0.497465 | tig0030010:+49514 | Msa1442450:CDS |
| GTTAGCAGGGGATGGGCCGA+AGG | 0.520097 | tig0030010:+49527 | Msa1442450:CDS |
| AAGAGAAAGTTAGCAGGGGA+TGG | 0.520299 | tig0030010:+49519 | Msa1442450:CDS |
| TTTCTTAGATGAGGTGGATG+AGG | 0.522879 | tig0030010:+49290 | Msa1442450:CDS |
| GAATGCTTTGGGAGGCTCTG+TGG | 0.523683 | tig0030010:+48990 | Msa1442450:CDS |
| TTGATAGAAACATCTATGTC+CGG | 0.531297 | tig0030010:+49138 | Msa1442450:CDS |
| TAGGGACATGAGAGGGGCGA+GGG | 0.531432 | tig0030010:+49191 | Msa1442450:CDS |
| TAGTAGTTCAGGTCTAAAGT+TGG | 0.534004 | tig0030010:+49095 | Msa1442450:CDS |
| CTCCCTTGACCATAGCATAC+AGG | 0.534135 | tig0030010:-49584 | Msa1442450:intergenic |
| TTAGGGACATGAGAGGGGCG+AGG | 0.535492 | tig0030010:+49190 | Msa1442450:CDS |
| GGCAGCTTTCTTAGATGAGG+TGG | 0.541030 | tig0030010:+49284 | Msa1442450:CDS |
| GCGAGGGTTCTTGATTTGAA+AGG | 0.543509 | tig0030010:+49207 | Msa1442450:CDS |
| AGTTACTTAACTATAATGAC+AGG | 0.555158 | tig0030010:+49231 | Msa1442450:CDS |
| TTAGCAGGGGATGGGCCGAA+GGG | 0.566169 | tig0030010:+49528 | Msa1442450:CDS |
| ATTCCTGTATGCTATGGTCA+AGG | 0.570553 | tig0030010:+49581 | Msa1442450:CDS |
| CACCGACTGAAAGTCTTGAC+CGG | 0.576357 | tig0030010:-49157 | Msa1442450:intergenic |
| AAGAAAGCTGCCATCAACTC+AGG | 0.577664 | tig0030010:-49273 | Msa1442450:intergenic |
| AGAGAAAGTTAGCAGGGGAT+GGG | 0.579488 | tig0030010:+49520 | Msa1442450:CDS |
| TGAGGATCCTCGTATTGAAG+TGG | 0.582306 | tig0030010:+49308 | Msa1442450:CDS |
| TCTCTGTTTAGGGACATGAG+AGG | 0.585344 | tig0030010:+49183 | Msa1442450:CDS |
| TTCCTGTATGCTATGGTCAA+GGG | 0.590606 | tig0030010:+49582 | Msa1442450:CDS |
| TGTAATGATGTTGTGGAATG+AGG | 0.594222 | tig0030010:+49494 | Msa1442450:CDS |
| GATGGCAGCTTTCTTAGATG+AGG | 0.600387 | tig0030010:+49281 | Msa1442450:CDS |
| TGATGCATTCCTGTATGCTA+TGG | 0.602058 | tig0030010:+49575 | Msa1442450:CDS |
| CTGCCATCAACTCAGGTCGA+TGG | 0.604479 | tig0030010:-49266 | Msa1442450:intergenic |
| TTCAGGTCTAAAGTTGGACG+TGG | 0.606771 | tig0030010:+49101 | Msa1442450:CDS |
| TGATGCTGTGATGCAAGTTG+TGG | 0.610490 | tig0030010:+49614 | Msa1442450:CDS |
| GGAGGCTACTCTATTGGTCA+TGG | 0.614521 | tig0030010:+49068 | Msa1442450:CDS |
| TAGCAGGGGATGGGCCGAAG+GGG | 0.624535 | tig0030010:+49529 | Msa1442450:CDS |
| TCTGTTTAGGGACATGAGAG+GGG | 0.625777 | tig0030010:+49185 | Msa1442450:CDS |
| CTGTATGCTATGGTCAAGGG+AGG | 0.634721 | tig0030010:+49585 | Msa1442450:CDS |
| GAGGATCCTCGTATTGAAGT+GGG | 0.634866 | tig0030010:+49309 | Msa1442450:CDS |
| GGTAAAGAGAAAGTTAGCAG+GGG | 0.635844 | tig0030010:+49515 | Msa1442450:CDS |
| GATAAGATGAATGCTTTGGG+AGG | 0.643464 | tig0030010:+48982 | Msa1442450:CDS |
| GTCCGGTCAAGACTTTCAGT+CGG | 0.646873 | tig0030010:+49155 | Msa1442450:CDS |
| CAAAGAGAATCGAACTGCGG+AGG | 0.652528 | tig0030010:+49050 | Msa1442450:CDS |
| CTGCAAAGAGAATCGAACTG+CGG | 0.726664 | tig0030010:+49047 | Msa1442450:CDS |
| TGAGTACCCACTTCAATACG+AGG | 0.733899 | tig0030010:-49315 | Msa1442440:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAAAATATTTGTTGATAAG+TGG | + | tig0030010:49652-49671 | Msa1442450:CDS | 20.0% |
| !!! | TGAAAATATTTGTTGATAAG+TGG | + | tig0030010:49652-49671 | Msa1442450:CDS | 20.0% |
| ! | AGTTACTTAACTATAATGAC+AGG | + | tig0030010:49231-49250 | Msa1442450:CDS | 25.0% |
| !!! | ATTTTGATGTAATGATGTTG+TGG | + | tig0030010:49487-49506 | Msa1442450:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | + | tig0030010:49731-49750 | Msa1442450:CDS | 25.0% |
| !!! | GCTTATTGCTTTTAAGAATT+GGG | + | tig0030010:49758-49777 | Msa1442450:CDS | 25.0% |
| ! | AGTTACTTAACTATAATGAC+AGG | + | tig0030010:49231-49250 | Msa1442450:CDS | 25.0% |
| !!! | ATTTTGATGTAATGATGTTG+TGG | + | tig0030010:49487-49506 | Msa1442450:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | + | tig0030010:49731-49750 | Msa1442450:CDS | 25.0% |
| !!! | GCTTATTGCTTTTAAGAATT+GGG | + | tig0030010:49758-49777 | Msa1442450:CDS | 25.0% |
| TCTTGATAAGATGAATGCTT+TGG | + | tig0030010:48978-48997 | Msa1442450:CDS | 30.0% | |
| CTTGATAAGATGAATGCTTT+GGG | + | tig0030010:48979-48998 | Msa1442450:CDS | 30.0% | |
| !!! | TTGCAGTAAGCTTTTAAGAT+CGG | - | tig0030010:49033-49052 | Msa1442450:intergenic | 30.0% |
| ! | TGTTTCTATCAAAGCATCAT+AGG | - | tig0030010:49130-49149 | Msa1442450:intergenic | 30.0% |
| TTGATAGAAACATCTATGTC+CGG | + | tig0030010:49138-49157 | Msa1442450:CDS | 30.0% | |
| AACTATAATGACAGGTTTGA+TGG | + | tig0030010:49239-49258 | Msa1442450:CDS | 30.0% | |
| !! | TATAATCCACGCTTTTTGTA+AGG | + | tig0030010:49350-49369 | Msa1442450:intron | 30.0% |
| TGAAACATATCCGTTAATCA+GGG | - | tig0030010:49457-49476 | Msa1442450:intergenic | 30.0% | |
| !! | CGCTTATTGCTTTTAAGAAT+TGG | + | tig0030010:49757-49776 | Msa1442450:CDS | 30.0% |
| TCTTGATAAGATGAATGCTT+TGG | + | tig0030010:48978-48997 | Msa1442450:CDS | 30.0% | |
| CTTGATAAGATGAATGCTTT+GGG | + | tig0030010:48979-48998 | Msa1442450:CDS | 30.0% | |
| !!! | TTGCAGTAAGCTTTTAAGAT+CGG | - | tig0030010:49033-49052 | Msa1442450:intergenic | 30.0% |
| ! | TGTTTCTATCAAAGCATCAT+AGG | - | tig0030010:49130-49149 | Msa1442450:intergenic | 30.0% |
| TTGATAGAAACATCTATGTC+CGG | + | tig0030010:49138-49157 | Msa1442450:CDS | 30.0% | |
| AACTATAATGACAGGTTTGA+TGG | + | tig0030010:49239-49258 | Msa1442450:CDS | 30.0% | |
| !! | TATAATCCACGCTTTTTGTA+AGG | + | tig0030010:49350-49369 | Msa1442450:intron | 30.0% |
| TGAAACATATCCGTTAATCA+GGG | - | tig0030010:49457-49476 | Msa1442450:intergenic | 30.0% | |
| !! | CGCTTATTGCTTTTAAGAAT+TGG | + | tig0030010:49757-49776 | Msa1442450:CDS | 30.0% |
| ! | TAGTAGTTCAGGTCTAAAGT+TGG | + | tig0030010:49095-49114 | Msa1442450:CDS | 35.0% |
| ACATACTTGTCCCTGATTAA+CGG | + | tig0030010:49444-49463 | Msa1442450:intron | 35.0% | |
| CTGAAACATATCCGTTAATC+AGG | - | tig0030010:49458-49477 | Msa1442450:intergenic | 35.0% | |
| TGTAATGATGTTGTGGAATG+AGG | + | tig0030010:49494-49513 | Msa1442450:CDS | 35.0% | |
| AGGTAAAGAGAAAGTTAGCA+GGG | + | tig0030010:49514-49533 | Msa1442450:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | + | tig0030010:49698-49717 | Msa1442450:CDS | 35.0% | |
| ! | GACATTCTTTTTCCTTAACC+TGG | - | tig0030010:49724-49743 | Msa1442450:intergenic | 35.0% |
| !! | ATTGCTTTTAAGAATTGGGC+TGG | + | tig0030010:49762-49781 | Msa1442450:CDS | 35.0% |
| ! | TAGTAGTTCAGGTCTAAAGT+TGG | + | tig0030010:49095-49114 | Msa1442450:CDS | 35.0% |
| ACATACTTGTCCCTGATTAA+CGG | + | tig0030010:49444-49463 | Msa1442450:intron | 35.0% | |
| CTGAAACATATCCGTTAATC+AGG | - | tig0030010:49458-49477 | Msa1442450:intergenic | 35.0% | |
| TGTAATGATGTTGTGGAATG+AGG | + | tig0030010:49494-49513 | Msa1442450:CDS | 35.0% | |
| AGGTAAAGAGAAAGTTAGCA+GGG | + | tig0030010:49514-49533 | Msa1442450:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | + | tig0030010:49698-49717 | Msa1442450:CDS | 35.0% | |
| ! | GACATTCTTTTTCCTTAACC+TGG | - | tig0030010:49724-49743 | Msa1442450:intergenic | 35.0% |
| !! | ATTGCTTTTAAGAATTGGGC+TGG | + | tig0030010:49762-49781 | Msa1442450:CDS | 35.0% |
| ! | GATAAGATGAATGCTTTGGG+AGG | + | tig0030010:48982-49001 | Msa1442450:CDS | 40.0% |
| GTCATGGAGATTAGTAGTTC+AGG | + | tig0030010:49084-49103 | Msa1442450:CDS | 40.0% | |
| !! | AGTCGGTGTTTTCTCTGTTT+AGG | + | tig0030010:49172-49191 | Msa1442450:CDS | 40.0% |
| !! | GTCGGTGTTTTCTCTGTTTA+GGG | + | tig0030010:49173-49192 | Msa1442450:CDS | 40.0% |
| ! | CGAGGGTTCTTGATTTGAAA+GGG | + | tig0030010:49208-49227 | Msa1442450:CDS | 40.0% |
| TTTCTTAGATGAGGTGGATG+AGG | + | tig0030010:49290-49309 | Msa1442450:CDS | 40.0% | |
| ATGCAAGAAGGACTTTCAGA+AGG | + | tig0030010:49388-49407 | Msa1442450:intron | 40.0% | |
| GACAAGTATGTCTGGTCATT+CGG | - | tig0030010:49435-49454 | Msa1442450:intergenic | 40.0% | |
| TAATCAGGGACAAGTATGTC+TGG | - | tig0030010:49443-49462 | Msa1442450:intergenic | 40.0% | |
| GAGGTAAAGAGAAAGTTAGC+AGG | + | tig0030010:49513-49532 | Msa1442450:CDS | 40.0% | |
| GGTAAAGAGAAAGTTAGCAG+GGG | + | tig0030010:49515-49534 | Msa1442450:CDS | 40.0% | |
| TGGTCAAATTTGATCCCCTT+CGG | - | tig0030010:49546-49565 | Msa1442450:intergenic | 40.0% | |
| GGAATGCATCAATCAGATTC+TGG | - | tig0030010:49566-49585 | Msa1442450:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | + | tig0030010:49575-49594 | Msa1442450:CDS | 40.0% | |
| ATTCCTGTATGCTATGGTCA+AGG | + | tig0030010:49581-49600 | Msa1442450:CDS | 40.0% | |
| TTCCTGTATGCTATGGTCAA+GGG | + | tig0030010:49582-49601 | Msa1442450:CDS | 40.0% | |
| ATAAAAAGCTCAAAGTGGCC+AGG | + | tig0030010:49703-49722 | Msa1442450:CDS | 40.0% | |
| ! | GATAAGATGAATGCTTTGGG+AGG | + | tig0030010:48982-49001 | Msa1442450:CDS | 40.0% |
| GTCATGGAGATTAGTAGTTC+AGG | + | tig0030010:49084-49103 | Msa1442450:CDS | 40.0% | |
| !! | AGTCGGTGTTTTCTCTGTTT+AGG | + | tig0030010:49172-49191 | Msa1442450:CDS | 40.0% |
| !! | GTCGGTGTTTTCTCTGTTTA+GGG | + | tig0030010:49173-49192 | Msa1442450:CDS | 40.0% |
| ! | CGAGGGTTCTTGATTTGAAA+GGG | + | tig0030010:49208-49227 | Msa1442450:CDS | 40.0% |
| TTTCTTAGATGAGGTGGATG+AGG | + | tig0030010:49290-49309 | Msa1442450:CDS | 40.0% | |
| ATGCAAGAAGGACTTTCAGA+AGG | + | tig0030010:49388-49407 | Msa1442450:intron | 40.0% | |
| GACAAGTATGTCTGGTCATT+CGG | - | tig0030010:49435-49454 | Msa1442450:intergenic | 40.0% | |
| TAATCAGGGACAAGTATGTC+TGG | - | tig0030010:49443-49462 | Msa1442450:intergenic | 40.0% | |
| GAGGTAAAGAGAAAGTTAGC+AGG | + | tig0030010:49513-49532 | Msa1442450:CDS | 40.0% | |
| GGTAAAGAGAAAGTTAGCAG+GGG | + | tig0030010:49515-49534 | Msa1442450:CDS | 40.0% | |
| TGGTCAAATTTGATCCCCTT+CGG | - | tig0030010:49546-49565 | Msa1442450:intergenic | 40.0% | |
| GGAATGCATCAATCAGATTC+TGG | - | tig0030010:49566-49585 | Msa1442450:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | + | tig0030010:49575-49594 | Msa1442450:CDS | 40.0% | |
| ATTCCTGTATGCTATGGTCA+AGG | + | tig0030010:49581-49600 | Msa1442450:CDS | 40.0% | |
| TTCCTGTATGCTATGGTCAA+GGG | + | tig0030010:49582-49601 | Msa1442450:CDS | 40.0% | |
| ATAAAAAGCTCAAAGTGGCC+AGG | + | tig0030010:49703-49722 | Msa1442450:CDS | 40.0% | |
| CTGCAAAGAGAATCGAACTG+CGG | + | tig0030010:49047-49066 | Msa1442450:CDS | 45.0% | |
| ! | TTCAGGTCTAAAGTTGGACG+TGG | + | tig0030010:49101-49120 | Msa1442450:CDS | 45.0% |
| TCTCTGTTTAGGGACATGAG+AGG | + | tig0030010:49183-49202 | Msa1442450:CDS | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | + | tig0030010:49184-49203 | Msa1442450:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | + | tig0030010:49185-49204 | Msa1442450:CDS | 45.0% | |
| ! | GCGAGGGTTCTTGATTTGAA+AGG | + | tig0030010:49207-49226 | Msa1442450:CDS | 45.0% |
| AAGAAAGCTGCCATCAACTC+AGG | - | tig0030010:49276-49295 | Msa1442450:intergenic | 45.0% | |
| GATGGCAGCTTTCTTAGATG+AGG | + | tig0030010:49281-49300 | Msa1442450:CDS | 45.0% | |
| TGAGGATCCTCGTATTGAAG+TGG | + | tig0030010:49308-49327 | Msa1442450:CDS | 45.0% | |
| GAGGATCCTCGTATTGAAGT+GGG | + | tig0030010:49309-49328 | Msa1442450:CDS | 45.0% | |
| TGAGTACCCACTTCAATACG+AGG | - | tig0030010:49318-49337 | Msa1442450:intergenic | 45.0% | |
| !! | ATCCACGCTTTTTGTAAGGC+TGG | + | tig0030010:49354-49373 | Msa1442450:intron | 45.0% |
| !! | TCCACGCTTTTTGTAAGGCT+GGG | + | tig0030010:49355-49374 | Msa1442450:intron | 45.0% |
| AAGAGAAAGTTAGCAGGGGA+TGG | + | tig0030010:49519-49538 | Msa1442450:CDS | 45.0% | |
| AGAGAAAGTTAGCAGGGGAT+GGG | + | tig0030010:49520-49539 | Msa1442450:CDS | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | + | tig0030010:49614-49633 | Msa1442450:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | + | tig0030010:49674-49693 | Msa1442450:CDS | 45.0% | |
| CTGCAAAGAGAATCGAACTG+CGG | + | tig0030010:49047-49066 | Msa1442450:CDS | 45.0% | |
| ! | TTCAGGTCTAAAGTTGGACG+TGG | + | tig0030010:49101-49120 | Msa1442450:CDS | 45.0% |
| TCTCTGTTTAGGGACATGAG+AGG | + | tig0030010:49183-49202 | Msa1442450:CDS | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | + | tig0030010:49184-49203 | Msa1442450:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | + | tig0030010:49185-49204 | Msa1442450:CDS | 45.0% | |
| ! | GCGAGGGTTCTTGATTTGAA+AGG | + | tig0030010:49207-49226 | Msa1442450:CDS | 45.0% |
| AAGAAAGCTGCCATCAACTC+AGG | - | tig0030010:49276-49295 | Msa1442450:intergenic | 45.0% | |
| GATGGCAGCTTTCTTAGATG+AGG | + | tig0030010:49281-49300 | Msa1442450:CDS | 45.0% | |
| TGAGGATCCTCGTATTGAAG+TGG | + | tig0030010:49308-49327 | Msa1442450:CDS | 45.0% | |
| GAGGATCCTCGTATTGAAGT+GGG | + | tig0030010:49309-49328 | Msa1442450:CDS | 45.0% | |
| TGAGTACCCACTTCAATACG+AGG | - | tig0030010:49318-49337 | Msa1442450:intergenic | 45.0% | |
| !! | ATCCACGCTTTTTGTAAGGC+TGG | + | tig0030010:49354-49373 | Msa1442450:intron | 45.0% |
| !! | TCCACGCTTTTTGTAAGGCT+GGG | + | tig0030010:49355-49374 | Msa1442450:intron | 45.0% |
| AAGAGAAAGTTAGCAGGGGA+TGG | + | tig0030010:49519-49538 | Msa1442450:CDS | 45.0% | |
| AGAGAAAGTTAGCAGGGGAT+GGG | + | tig0030010:49520-49539 | Msa1442450:CDS | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | + | tig0030010:49614-49633 | Msa1442450:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | + | tig0030010:49674-49693 | Msa1442450:CDS | 45.0% | |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | + | tig0030010:48991-49010 | Msa1442450:CDS | 50.0% |
| CAAAGAGAATCGAACTGCGG+AGG | + | tig0030010:49050-49069 | Msa1442450:CDS | 50.0% | |
| AACTGCGGAGGCTACTCTAT+TGG | + | tig0030010:49062-49081 | Msa1442450:CDS | 50.0% | |
| GGAGGCTACTCTATTGGTCA+TGG | + | tig0030010:49068-49087 | Msa1442450:CDS | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | + | tig0030010:49155-49174 | Msa1442450:CDS | 50.0% | |
| ! | CACCGACTGAAAGTCTTGAC+CGG | - | tig0030010:49160-49179 | Msa1442450:intergenic | 50.0% |
| ! | GAACCATCGACCTGAGTTGA+TGG | + | tig0030010:49263-49282 | Msa1442450:CDS | 50.0% |
| GGCAGCTTTCTTAGATGAGG+TGG | + | tig0030010:49284-49303 | Msa1442450:CDS | 50.0% | |
| TCCCAGCCTTACAAAAAGCG+TGG | - | tig0030010:49359-49378 | Msa1442450:intergenic | 50.0% | |
| !! | ACGCTTTTTGTAAGGCTGGG+AGG | + | tig0030010:49358-49377 | Msa1442450:intron | 50.0% |
| GGAGGCTAGAAGATGCAAGA+AGG | + | tig0030010:49376-49395 | Msa1442450:intron | 50.0% | |
| CTCCCTTGACCATAGCATAC+AGG | - | tig0030010:49587-49606 | Msa1442450:intergenic | 50.0% | |
| CTGTATGCTATGGTCAAGGG+AGG | + | tig0030010:49585-49604 | Msa1442450:CDS | 50.0% | |
| AGCTCAAAGTGGCCAGGTTA+AGG | + | tig0030010:49709-49728 | Msa1442450:CDS | 50.0% | |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | + | tig0030010:48991-49010 | Msa1442450:CDS | 50.0% |
| CAAAGAGAATCGAACTGCGG+AGG | + | tig0030010:49050-49069 | Msa1442450:CDS | 50.0% | |
| AACTGCGGAGGCTACTCTAT+TGG | + | tig0030010:49062-49081 | Msa1442450:CDS | 50.0% | |
| GGAGGCTACTCTATTGGTCA+TGG | + | tig0030010:49068-49087 | Msa1442450:CDS | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | + | tig0030010:49155-49174 | Msa1442450:CDS | 50.0% | |
| ! | CACCGACTGAAAGTCTTGAC+CGG | - | tig0030010:49160-49179 | Msa1442450:intergenic | 50.0% |
| ! | GAACCATCGACCTGAGTTGA+TGG | + | tig0030010:49263-49282 | Msa1442450:CDS | 50.0% |
| GGCAGCTTTCTTAGATGAGG+TGG | + | tig0030010:49284-49303 | Msa1442450:CDS | 50.0% | |
| TCCCAGCCTTACAAAAAGCG+TGG | - | tig0030010:49359-49378 | Msa1442450:intergenic | 50.0% | |
| !! | ACGCTTTTTGTAAGGCTGGG+AGG | + | tig0030010:49358-49377 | Msa1442450:intron | 50.0% |
| GGAGGCTAGAAGATGCAAGA+AGG | + | tig0030010:49376-49395 | Msa1442450:intron | 50.0% | |
| CTCCCTTGACCATAGCATAC+AGG | - | tig0030010:49587-49606 | Msa1442450:intergenic | 50.0% | |
| CTGTATGCTATGGTCAAGGG+AGG | + | tig0030010:49585-49604 | Msa1442450:CDS | 50.0% | |
| AGCTCAAAGTGGCCAGGTTA+AGG | + | tig0030010:49709-49728 | Msa1442450:CDS | 50.0% | |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | + | tig0030010:48990-49009 | Msa1442450:CDS | 55.0% |
| CTGCCATCAACTCAGGTCGA+TGG | - | tig0030010:49269-49288 | Msa1442450:intergenic | 55.0% | |
| ! | GGTCATTCGGCTCGAATTGC+AGG | - | tig0030010:49422-49441 | Msa1442450:intergenic | 55.0% |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | + | tig0030010:48990-49009 | Msa1442450:CDS | 55.0% |
| CTGCCATCAACTCAGGTCGA+TGG | - | tig0030010:49269-49288 | Msa1442450:intergenic | 55.0% | |
| ! | GGTCATTCGGCTCGAATTGC+AGG | - | tig0030010:49422-49441 | Msa1442450:intergenic | 55.0% |
| TTGGGAGGCTCTGTGGGTCT+TGG | + | tig0030010:48997-49016 | Msa1442450:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | + | tig0030010:48998-49017 | Msa1442450:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | + | tig0030010:49190-49209 | Msa1442450:CDS | 60.0% | |
| TAGGGACATGAGAGGGGCGA+GGG | + | tig0030010:49191-49210 | Msa1442450:CDS | 60.0% | |
| TTAGCAGGGGATGGGCCGAA+GGG | + | tig0030010:49528-49547 | Msa1442450:CDS | 60.0% | |
| TTGGGAGGCTCTGTGGGTCT+TGG | + | tig0030010:48997-49016 | Msa1442450:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | + | tig0030010:48998-49017 | Msa1442450:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | + | tig0030010:49190-49209 | Msa1442450:CDS | 60.0% | |
| TAGGGACATGAGAGGGGCGA+GGG | + | tig0030010:49191-49210 | Msa1442450:CDS | 60.0% | |
| TTAGCAGGGGATGGGCCGAA+GGG | + | tig0030010:49528-49547 | Msa1442450:CDS | 60.0% | |
| GGGAGGCTCTGTGGGTCTTG+GGG | + | tig0030010:48999-49018 | Msa1442450:CDS | 65.0% | |
| GTTAGCAGGGGATGGGCCGA+AGG | + | tig0030010:49527-49546 | Msa1442450:CDS | 65.0% | |
| TAGCAGGGGATGGGCCGAAG+GGG | + | tig0030010:49529-49548 | Msa1442450:CDS | 65.0% | |
| GGGAGGCTCTGTGGGTCTTG+GGG | + | tig0030010:48999-49018 | Msa1442450:CDS | 65.0% | |
| GTTAGCAGGGGATGGGCCGA+AGG | + | tig0030010:49527-49546 | Msa1442450:CDS | 65.0% | |
| TAGCAGGGGATGGGCCGAAG+GGG | + | tig0030010:49529-49548 | Msa1442450:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030010 | gene | 48937 | 49797 | 48937 | ID=Msa1442450;Name=Msa1442450 |
| tig0030010 | mRNA | 48937 | 49797 | 48937 | ID=Msa1442450-mRNA-1;Parent=Msa1442450;Name=Msa1442450-mRNA-1;_AED=0.32;_eAED=0.35;_QI=0|0|0|1|1|1|2|0|237 |
| tig0030010 | exon | 48937 | 49330 | 48937 | ID=Msa1442450-mRNA-1:exon:13339;Parent=Msa1442450-mRNA-1 |
| tig0030010 | exon | 49478 | 49797 | 49478 | ID=Msa1442450-mRNA-1:exon:13340;Parent=Msa1442450-mRNA-1 |
| tig0030010 | CDS | 48937 | 49330 | 48937 | ID=Msa1442450-mRNA-1:cds;Parent=Msa1442450-mRNA-1 |
| tig0030010 | CDS | 49478 | 49797 | 49478 | ID=Msa1442450-mRNA-1:cds;Parent=Msa1442450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
