Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163350 | KEH23814.1 | 78.431 | 51 | 11 | 0 | 610 | 660 | 474 | 524 | 1.71e-13 | 86.7 |
| Msa1163350 | KEH23814.1 | 84.395 | 628 | 41 | 8 | 1 | 615 | 1 | 584 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163350 | sp|Q8W4K5|VAB_ARATH | 63.786 | 486 | 143 | 13 | 3 | 468 | 10 | 482 | 3.95e-155 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163350 | A0A072U287 | 78.431 | 51 | 11 | 0 | 610 | 660 | 474 | 524 | 8.15e-14 | 86.7 |
| Msa1163350 | A0A072U287 | 84.395 | 628 | 41 | 8 | 1 | 615 | 1 | 584 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018920 | Msa1163350 | 0.822499 | 2.292874e-53 | -8.615850e-47 |
| Msa0020540 | Msa1163350 | 0.825101 | 5.631391e-54 | -8.615850e-47 |
| Msa0112670 | Msa1163350 | 0.804414 | 2.184792e-49 | -8.615850e-47 |
| Msa0603410 | Msa1163350 | 0.808478 | 3.036178e-50 | -8.615850e-47 |
| Msa0615630 | Msa1163350 | 0.827844 | 1.249787e-54 | -8.615850e-47 |
| Msa0620500 | Msa1163350 | 0.823789 | 1.146593e-53 | -8.615850e-47 |
| Msa0622920 | Msa1163350 | 0.803984 | 2.684983e-49 | -8.615850e-47 |
| Msa0648760 | Msa1163350 | 0.811238 | 7.738584e-51 | -8.615850e-47 |
| Msa0654740 | Msa1163350 | 0.826222 | 3.054311e-54 | -8.615850e-47 |
| Msa0707260 | Msa1163350 | 0.805002 | 1.647452e-49 | -8.615850e-47 |
| Msa0713920 | Msa1163350 | 0.800187 | 1.620852e-48 | -8.615850e-47 |
| Msa0717900 | Msa1163350 | 0.827837 | 1.254822e-54 | -8.615850e-47 |
| Msa0720280 | Msa1163350 | 0.812316 | 4.507231e-51 | -8.615850e-47 |
| Msa0803140 | Msa1163350 | 0.807029 | 6.169637e-50 | -8.615850e-47 |
| Msa0816080 | Msa1163350 | 0.802807 | 4.709224e-49 | -8.615850e-47 |
| Msa0837680 | Msa1163350 | 0.805848 | 1.094675e-49 | -8.615850e-47 |
| Msa0841500 | Msa1163350 | 0.804652 | 1.948735e-49 | -8.615850e-47 |
| Msa0156090 | Msa1163350 | 0.804824 | 1.794102e-49 | -8.615850e-47 |
| Msa0159590 | Msa1163350 | 0.802955 | 4.387280e-49 | -8.615850e-47 |
| Msa0170070 | Msa1163350 | 0.803932 | 2.752836e-49 | -8.615850e-47 |
| Msa0373170 | Msa1163350 | 0.837174 | 6.074700e-57 | -8.615850e-47 |
| Msa0412130 | Msa1163350 | 0.806729 | 7.142503e-50 | -8.615850e-47 |
| Msa0421750 | Msa1163350 | 0.841531 | 4.492439e-58 | -8.615850e-47 |
| Msa0433760 | Msa1163350 | 0.821318 | 4.302461e-53 | -8.615850e-47 |
| Msa0467690 | Msa1163350 | 0.838853 | 2.246692e-57 | -8.615850e-47 |
| Msa0477630 | Msa1163350 | 0.820540 | 6.499412e-53 | -8.615850e-47 |
| Msa1000970 | Msa1163350 | 0.802569 | 5.272561e-49 | -8.615850e-47 |
| Msa1008670 | Msa1163350 | 0.825755 | 3.942180e-54 | -8.615850e-47 |
| Msa1033920 | Msa1163350 | 0.806861 | 6.697363e-50 | -8.615850e-47 |
| Msa1036090 | Msa1163350 | 0.965244 | 2.354745e-124 | -8.615850e-47 |
| Msa1060900 | Msa1163350 | 0.813627 | 2.325781e-51 | -8.615850e-47 |
| Msa1076020 | Msa1163350 | 0.820937 | 5.268089e-53 | -8.615850e-47 |
| Msa1082380 | Msa1163350 | 0.808617 | 2.835939e-50 | -8.615850e-47 |
| Msa0358060 | Msa1163350 | 0.971656 | 1.653607e-133 | -8.615850e-47 |
| Msa1122560 | Msa1163350 | 0.976438 | 7.960176e-142 | -8.615850e-47 |
| Msa1127280 | Msa1163350 | 0.816444 | 5.513284e-52 | -8.615850e-47 |
| Msa1159590 | Msa1163350 | 0.806174 | 9.350132e-50 | -8.615850e-47 |
| Msa1162880 | Msa1163350 | 0.816007 | 6.902082e-52 | -8.615850e-47 |
| Msa1163180 | Msa1163350 | 0.811985 | 5.323922e-51 | -8.615850e-47 |
| Msa1163350 | Msa1165480 | 0.815501 | 8.948981e-52 | -8.615850e-47 |
| Msa1163350 | Msa1215980 | 0.824027 | 1.008251e-53 | -8.615850e-47 |
| Msa1163350 | Msa1220030 | 0.818335 | 2.068335e-52 | -8.615850e-47 |
| Msa1163350 | Msa1220170 | 0.803596 | 3.233343e-49 | -8.615850e-47 |
| Msa1163350 | Msa1254540 | 0.801261 | 9.786494e-49 | -8.615850e-47 |
| Msa1163350 | Msa1266690 | 0.816217 | 6.198146e-52 | -8.615850e-47 |
| Msa1163350 | Msa1268540 | 0.805454 | 1.324405e-49 | -8.615850e-47 |
| Msa1163350 | Msa1300460 | 0.807027 | 6.176985e-50 | -8.615850e-47 |
| Msa1163350 | Msa1301820 | 0.812449 | 4.215931e-51 | -8.615850e-47 |
| Msa1163350 | Msa1333360 | 0.807217 | 5.631176e-50 | -8.615850e-47 |
| Msa1163350 | Msa1339170 | 0.812349 | 4.432968e-51 | -8.615850e-47 |
| Msa1163350 | Msa1339230 | 0.820821 | 5.600255e-53 | -8.615850e-47 |
| Msa1163350 | Msa1361930 | 0.807732 | 4.377369e-50 | -8.615850e-47 |
| Msa1163350 | Msa1381470 | 0.814222 | 1.719236e-51 | -8.615850e-47 |
| Msa1163350 | Msa1393560 | 0.834751 | 2.500086e-56 | -8.615850e-47 |
| Msa1163350 | Msa1399190 | 0.806849 | 6.737235e-50 | -8.615850e-47 |
| Msa1163350 | Msa1426320 | 0.812995 | 3.202491e-51 | -8.615850e-47 |
| Msa1163350 | Msa1435100 | 0.801001 | 1.106283e-48 | -8.615850e-47 |
| Msa1163350 | Msa1447170 | 0.813709 | 2.231561e-51 | -8.615850e-47 |
| Msa0514020 | Msa1163350 | 0.834035 | 3.782997e-56 | -8.615850e-47 |
| Msa0521680 | Msa1163350 | 0.814882 | 1.228564e-51 | -8.615850e-47 |
| Msa0548000 | Msa1163350 | 0.836293 | 1.018959e-56 | -8.615850e-47 |
| Msa0554300 | Msa1163350 | 0.806446 | 8.195355e-50 | -8.615850e-47 |
| Msa0561560 | Msa1163350 | 0.824190 | 9.233419e-54 | -8.615850e-47 |
| Msa0564980 | Msa1163350 | 0.801292 | 9.647413e-49 | -8.615850e-47 |
| Msa0572830 | Msa1163350 | 0.844715 | 6.368839e-59 | -8.615850e-47 |
| Msa0577280 | Msa1163350 | 0.803687 | 3.095775e-49 | -8.615850e-47 |
| Msa0577330 | Msa1163350 | 0.808092 | 3.670099e-50 | -8.615850e-47 |
| Msa0861440 | Msa1163350 | 0.810836 | 9.455293e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163350 | MtrunA17_Chr7g0260211 | 96.383 | 470 | 10 | 2 | 1 | 468 | 1 | 465 | 0.0 | 919 |
| Msa1163350 | MtrunA17_Chr1g0185201 | 75.783 | 479 | 101 | 10 | 1 | 468 | 1 | 475 | 0.0 | 585 |
| Msa1163350 | MtrunA17_Chr1g0166381 | 62.554 | 462 | 149 | 9 | 18 | 468 | 11 | 459 | 1.14e-135 | 408 |
| Msa1163350 | MtrunA17_Chr1g0204831 | 58.495 | 465 | 161 | 10 | 8 | 468 | 10 | 446 | 1.94e-121 | 370 |
| Msa1163350 | MtrunA17_Chr3g0140081 | 46.233 | 292 | 129 | 5 | 177 | 467 | 103 | 367 | 1.41e-58 | 202 |
| Msa1163350 | MtrunA17_Chr4g0019631 | 47.390 | 249 | 104 | 4 | 177 | 424 | 64 | 286 | 1.12e-47 | 170 |
| Msa1163350 | MtrunA17_Chr5g0399391 | 36.913 | 298 | 147 | 6 | 178 | 466 | 113 | 378 | 8.53e-43 | 159 |
| Msa1163350 | MtrunA17_Chr4g0073191 | 33.333 | 294 | 152 | 9 | 178 | 468 | 146 | 398 | 4.52e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163350 | AT3G63300.1 | 63.786 | 486 | 143 | 13 | 3 | 468 | 10 | 482 | 4.01e-156 | 462 |
| Msa1163350 | AT3G22810.1 | 59.382 | 453 | 172 | 7 | 20 | 468 | 18 | 462 | 4.85e-153 | 453 |
| Msa1163350 | AT4G14740.1 | 59.737 | 457 | 169 | 6 | 20 | 468 | 18 | 467 | 4.87e-153 | 453 |
| Msa1163350 | AT4G14740.2 | 59.737 | 457 | 169 | 6 | 20 | 468 | 18 | 467 | 4.87e-153 | 453 |
| Msa1163350 | AT5G43870.1 | 57.081 | 459 | 152 | 10 | 20 | 468 | 22 | 445 | 1.49e-132 | 399 |
| Msa1163350 | AT4G14740.4 | 59.194 | 397 | 147 | 7 | 20 | 408 | 18 | 407 | 5.37e-120 | 365 |
| Msa1163350 | AT3G22810.3 | 62.848 | 323 | 119 | 1 | 146 | 468 | 3 | 324 | 8.50e-119 | 360 |
| Msa1163350 | AT3G22810.2 | 58.929 | 392 | 149 | 7 | 20 | 407 | 18 | 401 | 9.36e-119 | 362 |
| Msa1163350 | AT4G14740.3 | 63.914 | 327 | 113 | 2 | 146 | 468 | 3 | 328 | 3.00e-118 | 358 |
| Msa1163350 | AT3G63300.2 | 63.636 | 330 | 108 | 5 | 145 | 468 | 1 | 324 | 1.16e-101 | 315 |
| Msa1163350 | AT5G43870.2 | 56.391 | 399 | 129 | 10 | 20 | 408 | 22 | 385 | 1.38e-99 | 312 |
| Msa1163350 | AT4G17350.1 | 37.458 | 299 | 147 | 7 | 178 | 466 | 115 | 383 | 4.70e-39 | 149 |
| Msa1163350 | AT4G16670.1 | 35.235 | 298 | 163 | 6 | 178 | 466 | 132 | 408 | 2.31e-38 | 148 |
| Msa1163350 | AT4G32780.2 | 41.196 | 301 | 142 | 7 | 177 | 472 | 150 | 420 | 2.53e-35 | 139 |
| Msa1163350 | AT5G47440.1 | 34.130 | 293 | 162 | 5 | 189 | 478 | 134 | 398 | 2.77e-35 | 139 |
| Msa1163350 | AT4G32780.1 | 41.196 | 301 | 142 | 7 | 177 | 472 | 131 | 401 | 3.07e-35 | 139 |
| Msa1163350 | AT4G16670.2 | 37.238 | 239 | 121 | 5 | 178 | 407 | 132 | 350 | 3.73e-28 | 117 |
| Msa1163350 | AT4G16670.3 | 33.209 | 268 | 121 | 6 | 178 | 407 | 132 | 379 | 1.17e-22 | 101 |
| Msa1163350 | AT5G57770.1 | 32.069 | 290 | 164 | 7 | 178 | 465 | 128 | 386 | 1.84e-20 | 95.1 |
| Msa1163350 | AT5G57770.2 | 35.714 | 224 | 118 | 3 | 178 | 401 | 128 | 325 | 7.96e-20 | 92.0 |
Find 158 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAATCTTGTCATTCTT+TGG | 0.201898 | 7_4:-54574146 | Msa1163360:intron |
| AACGGTGGCGGTTCTTTAAC+TGG | 0.219424 | 7_4:+54567411 | Msa1163350:CDS |
| TATTCTGTCTCTGCCATTCT+TGG | 0.227595 | 7_4:+54574107 | Msa1163350:CDS |
| TCTGGACTCAAGGGGTTTCT+AGG | 0.252811 | 7_4:+54569261 | Msa1163350:CDS |
| CTCTTCCACCATTGAATAAT+GGG | 0.255578 | 7_4:-54567613 | None:intergenic |
| GCTCTTCCACCATTGAATAA+TGG | 0.258525 | 7_4:-54567614 | None:intergenic |
| ATCATTAGTCGTGCCACTTT+TGG | 0.262600 | 7_4:-54574725 | Msa1163360:intron |
| TGCCCTTAGCAAGTAGTTCT+TGG | 0.278237 | 7_4:-54568699 | None:intergenic |
| AATTCATCTGAATGAGAAAT+TGG | 0.282397 | 7_4:-54567444 | None:intergenic |
| TAAGCTTTATCTTGTTCATT+TGG | 0.304748 | 7_4:-54574661 | Msa1163360:intron |
| GCGTTATTATCCGACGGTTT+TGG | 0.306770 | 7_4:-54570051 | None:intergenic |
| CTGCCACTCGGAACCGATTC+AGG | 0.307254 | 7_4:-54566960 | None:intergenic |
| CTAGAGCTGTGAAGGACTTA+TGG | 0.308647 | 7_4:+54568533 | Msa1163350:CDS |
| GGCAATGGCACGGCTTGTTC+AGG | 0.312483 | 7_4:+54567650 | Msa1163350:CDS |
| ATCAAAGAGAATATGATATC+TGG | 0.312576 | 7_4:+54569243 | Msa1163350:CDS |
| GAGTGGTTAGTGGTTTCTTC+AGG | 0.337132 | 7_4:-54567128 | None:intergenic |
| GATAATCTACCTGACGTTAA+TGG | 0.341993 | 7_4:-54567369 | None:intergenic |
| TATCTCAGAGATTTGCTCAT+AGG | 0.357780 | 7_4:+54574684 | Msa1163350:CDS |
| ATGGGAGGTATACCAATATC+TGG | 0.367567 | 7_4:+54568589 | Msa1163350:CDS |
| AGAGATTTGCTCATAGGATT+GGG | 0.375125 | 7_4:+54574690 | Msa1163350:CDS |
| CGACCCTGATTGATAGATAC+TGG | 0.376538 | 7_4:-54574212 | Msa1163360:intron |
| TTCGATGGACCTGGATCATA+TGG | 0.389234 | 7_4:-54570117 | None:intergenic |
| TTTGTGTGGTTGTCATGCTT+TGG | 0.394458 | 7_4:-54569823 | None:intergenic |
| TAATGATAATGTACCGTTAC+GGG | 0.396975 | 7_4:-54568740 | None:intergenic |
| TGGCGAAGCCACCTATGAAT+TGG | 0.403705 | 7_4:-54570011 | None:intergenic |
| TCTTGTCATTCTTTGGACTA+AGG | 0.403952 | 7_4:-54574139 | Msa1163360:intron |
| TTGGATGCACATCTGCCTTA+AGG | 0.405043 | 7_4:-54574642 | Msa1163360:intron |
| CAAAATCCTCAAGAGTATAA+AGG | 0.409938 | 7_4:-54574079 | Msa1163360:intron |
| CAGAGATTTGCTCATAGGAT+TGG | 0.411711 | 7_4:+54574689 | Msa1163350:CDS |
| TATTCCGTCTCTGCCATTGT+TGG | 0.412327 | 7_4:+54569784 | Msa1163350:CDS |
| ACAAAATCGTCAAGTGTAGA+AGG | 0.414935 | 7_4:-54569757 | None:intergenic |
| ATGAAGAGCAAACATGTTGC+AGG | 0.415682 | 7_4:+54568988 | Msa1163350:CDS |
| ATATCCAGTATCTATCAATC+AGG | 0.420745 | 7_4:+54574208 | Msa1163350:CDS |
| CACAATTTCTCCACTATCAC+TGG | 0.431487 | 7_4:-54568647 | None:intergenic |
| TCCATTCACCCATTATTCAA+TGG | 0.432610 | 7_4:+54567605 | Msa1163350:CDS |
| TTTGAACGAGGCTCGACCCT+TGG | 0.434784 | 7_4:-54569874 | None:intergenic |
| GACAGACGTGGCTGTTGCTT+CGG | 0.436071 | 7_4:+54567853 | Msa1163350:CDS |
| GCAACTAACATCCAATTCAT+AGG | 0.437213 | 7_4:+54570000 | Msa1163350:CDS |
| AACAACAGCTCCAGTGATAG+TGG | 0.442876 | 7_4:+54568637 | Msa1163350:CDS |
| TAGTTATGTTGGATGCCTTA+AGG | 0.446454 | 7_4:+54574627 | Msa1163350:intron |
| CAATTGTCTGCGTCCTGAAT+CGG | 0.446737 | 7_4:+54566947 | Msa1163350:CDS |
| AGCAAGTAGTTCTTGGCTGC+AGG | 0.448375 | 7_4:-54568692 | None:intergenic |
| TCATCTGATAGATCTCTTCC+TGG | 0.453162 | 7_4:-54569152 | None:intergenic |
| TCTGTTTACATACATCGAAC+AGG | 0.458457 | 7_4:+54568869 | Msa1163350:CDS |
| GATGATGATCTTAGTTATGT+TGG | 0.463134 | 7_4:+54574616 | Msa1163350:intron |
| CTTGTCATTCTTTGGACTAA+GGG | 0.463295 | 7_4:-54574138 | Msa1163360:intron |
| TCTTCATGCATGCCTTCAAA+TGG | 0.464517 | 7_4:+54567098 | Msa1163350:CDS |
| TTCAGATAAAGAGTGGTTAG+TGG | 0.466917 | 7_4:-54567138 | None:intergenic |
| TCAGGACGCAGACAATTGAT+TGG | 0.473398 | 7_4:-54566942 | None:intergenic |
| GGCAGAGGGGTGCTGCCACT+CGG | 0.474082 | 7_4:-54566972 | None:intergenic |
| ACCATTGAATAATGGGTGAA+TGG | 0.477885 | 7_4:-54567606 | None:intergenic |
| CCTCCCATTCCTTTCTCCAA+TGG | 0.478119 | 7_4:-54568574 | None:intergenic |
| GGAGAGTCCTCGAGTTCCTA+TGG | 0.478365 | 7_4:+54566995 | Msa1163350:CDS |
| CTTGGAGTGTTGATTGATAC+CGG | 0.481427 | 7_4:-54569856 | None:intergenic |
| AGCAACAGCCACGTCTGTCT+TGG | 0.481577 | 7_4:-54567849 | None:intergenic |
| GGTATACCAATATCTGGAAA+AGG | 0.489627 | 7_4:+54568595 | Msa1163350:CDS |
| ATAATGATAATGTACCGTTA+CGG | 0.489717 | 7_4:-54568741 | None:intergenic |
| GAGTGGCAGCACCCCTCTGC+CGG | 0.491471 | 7_4:+54566974 | Msa1163350:CDS |
| CAGCCAAGAACTACTTGCTA+AGG | 0.492651 | 7_4:+54568696 | Msa1163350:CDS |
| CTTTCAGTGTTGCTGCTCCT+CGG | 0.496117 | 7_4:-54568510 | None:intergenic |
| ACTCGAGGACTCTCCGGCAG+AGG | 0.496378 | 7_4:-54566987 | None:intergenic |
| CTCGAGGACTCTCCGGCAGA+GGG | 0.502516 | 7_4:-54566986 | None:intergenic |
| ATAGGAACTCGAGGACTCTC+CGG | 0.511006 | 7_4:-54566993 | None:intergenic |
| TTACAAATGCTGCAGGTTGG+TGG | 0.513407 | 7_4:-54569939 | None:intergenic |
| TCAGGAATAGAACCATTTGA+AGG | 0.517205 | 7_4:-54567110 | None:intergenic |
| ATATGAATCGTTAAAGTCTA+CGG | 0.525493 | 7_4:+54569729 | Msa1163350:CDS |
| CTTACTGCTGCAGCTGCCAC+AGG | 0.532447 | 7_4:+54567998 | Msa1163350:CDS |
| ACAAAACAAGGATGAGAAGA+TGG | 0.533868 | 7_4:+54567826 | Msa1163350:CDS |
| TTTAACGATTCATATGATCC+AGG | 0.536010 | 7_4:-54569721 | None:intergenic |
| AGCGAACCTTTGAACGGTGG+CGG | 0.538212 | 7_4:+54567399 | Msa1163350:CDS |
| GAATATGATATCTGGACTCA+AGG | 0.538804 | 7_4:+54569251 | Msa1163350:CDS |
| ACACCATTGGAGAAAGGAAT+GGG | 0.539484 | 7_4:+54568571 | Msa1163350:CDS |
| TTACTCAAACGCACCCGTAA+CGG | 0.540696 | 7_4:+54568727 | Msa1163350:CDS |
| CAAATGCTGCAGGTTGGTGG+TGG | 0.541546 | 7_4:-54569936 | None:intergenic |
| AGATCTCTTCCTGGCCATGC+TGG | 0.541598 | 7_4:-54569143 | None:intergenic |
| ATTTGCTGTTGCCGCCGCGA+TGG | 0.542104 | 7_4:-54567795 | None:intergenic |
| GATGAGCCTTTATACTCTTG+AGG | 0.542435 | 7_4:+54574073 | Msa1163350:CDS |
| TGGTGGTAGTGGCTGTGGAA+TGG | 0.546348 | 7_4:-54570031 | None:intergenic |
| AATATGATATCTGGACTCAA+GGG | 0.546826 | 7_4:+54569252 | Msa1163350:CDS |
| GGAAGAGATCTATCAGATGA+TGG | 0.550853 | 7_4:+54569155 | Msa1163350:CDS |
| CGGTATCAATCAACACTCCA+AGG | 0.551287 | 7_4:+54569857 | Msa1163350:CDS |
| ATCAGAGATTTCGATGGACC+TGG | 0.551970 | 7_4:-54570126 | None:intergenic |
| GCAGTAACACCATTGGAGAA+AGG | 0.553514 | 7_4:+54568565 | Msa1163350:CDS |
| AACACCATTGGAGAAAGGAA+TGG | 0.555483 | 7_4:+54568570 | Msa1163350:CDS |
| ATCACTGAACCATATGATCC+AGG | 0.557945 | 7_4:+54570108 | Msa1163350:CDS |
| AAAGAACCGCCACCGTTCAA+AGG | 0.558652 | 7_4:-54567405 | None:intergenic |
| GACGAGCTGCGAAGTAGCAG+AGG | 0.558780 | 7_4:-54567201 | None:intergenic |
| TGTCATTCTTTGGACTAAGG+GGG | 0.559738 | 7_4:-54574136 | Msa1163360:intron |
| TTGAGTTATTCAAAGAGACC+TGG | 0.560456 | 7_4:+54569703 | Msa1163350:intron |
| TGAATTTGACGATGTTGTCA+AGG | 0.561851 | 7_4:+54567461 | Msa1163350:CDS |
| GAGATACAATGGAAATCCAA+TGG | 0.564791 | 7_4:-54569973 | None:intergenic |
| ACGGATTTACCAGCATGGCC+AGG | 0.567017 | 7_4:+54569134 | Msa1163350:CDS |
| GTCGCCAACAATGGCAGAGA+CGG | 0.568307 | 7_4:-54569788 | None:intergenic |
| GAGATTTGCTCATAGGATTG+GGG | 0.571398 | 7_4:+54574691 | Msa1163350:CDS |
| GCGCGACCACCTTGCATCGG+TGG | 0.573326 | 7_4:+54567931 | Msa1163350:CDS |
| TGTGGAGGCTGCTGAAGCAA+TGG | 0.573897 | 7_4:+54567901 | Msa1163350:CDS |
| GAAGTGTCGCCATTAACGTC+AGG | 0.575049 | 7_4:+54567360 | Msa1163350:CDS |
| GGGAGTGATTAAACCAAAAG+TGG | 0.578515 | 7_4:+54574712 | Msa1163350:CDS |
| CTGAGCTGACCACCGATGCA+AGG | 0.581486 | 7_4:-54567940 | None:intergenic |
| CGGATTGAAAACAGACTCGA+GGG | 0.581533 | 7_4:+54569196 | Msa1163350:CDS |
| TATGTCACACTCTGCTAGAG+AGG | 0.585361 | 7_4:+54567235 | Msa1163350:CDS |
| TAACTGCAGGTGATCTACAC+TGG | 0.586350 | 7_4:+54568837 | Msa1163350:intron |
| CATGCTTTGGACTGAGCAGA+CGG | 0.588822 | 7_4:-54569810 | None:intergenic |
| ACTGAAAGCTAGAGCTGTGA+AGG | 0.590453 | 7_4:+54568525 | Msa1163350:CDS |
| TGGTGCTGCAGTAACACCAT+TGG | 0.591757 | 7_4:+54568558 | Msa1163350:CDS |
| GTGGAGGCTGCTGAAGCAAT+GGG | 0.591770 | 7_4:+54567902 | Msa1163350:CDS |
| GTATCTATCAATCAGGGTCG+AGG | 0.592461 | 7_4:+54574215 | Msa1163350:CDS |
| GGAGAAATTGTGAATGCAGA+TGG | 0.594536 | 7_4:+54568658 | Msa1163350:CDS |
| GAGCAGACGGTCGCCAACAA+TGG | 0.596169 | 7_4:-54569797 | None:intergenic |
| TGCTATAGCTGCCATCGCGG+CGG | 0.598800 | 7_4:+54567784 | Msa1163350:CDS |
| GCAAATGCTGGTGTTGGCAA+TGG | 0.603762 | 7_4:+54567635 | Msa1163350:CDS |
| TTGTCATTCTTTGGACTAAG+GGG | 0.607780 | 7_4:-54574137 | Msa1163360:intron |
| TAGTTGCTTCAGAGATACAA+TGG | 0.609236 | 7_4:-54569984 | None:intergenic |
| TGAGCGCGACCACCTTGCAT+CGG | 0.609517 | 7_4:+54567928 | Msa1163350:CDS |
| AGTGTGACATAATGCGCTCA+AGG | 0.610828 | 7_4:-54567223 | None:intergenic |
| ATTCACCCATTATTCAATGG+TGG | 0.611363 | 7_4:+54567608 | Msa1163350:CDS |
| TCTAGTTGCTGCACAATGTG+TGG | 0.616322 | 7_4:+54567883 | Msa1163350:CDS |
| TGTTCAGGACCTAAAACTGT+AGG | 0.617678 | 7_4:+54567665 | Msa1163350:CDS |
| GGAAGAGCAAATGCTGGTGT+TGG | 0.620253 | 7_4:+54567629 | Msa1163350:CDS |
| AAATTCATCAACACAAAACA+AGG | 0.621432 | 7_4:+54567814 | Msa1163350:CDS |
| TATTGTGCTAGACGTGTGCA+CGG | 0.621908 | 7_4:+54569115 | Msa1163350:CDS |
| TATCCAGTATCTATCAATCA+GGG | 0.622894 | 7_4:+54574209 | Msa1163350:CDS |
| TGCTGGTGTTGGCAATGGCA+CGG | 0.627563 | 7_4:+54567640 | Msa1163350:CDS |
| AGCCAAGAACTACTTGCTAA+GGG | 0.627681 | 7_4:+54568697 | Msa1163350:CDS |
| AGAGATCTTCAGATAAAGAG+TGG | 0.631675 | 7_4:-54567145 | None:intergenic |
| CACAGCAGCGAACCTTTGAA+CGG | 0.633000 | 7_4:+54567393 | Msa1163350:CDS |
| GCCACTACCACCAAAACCGT+CGG | 0.635853 | 7_4:+54570041 | Msa1163350:CDS |
| AGTTGCTGCACAATGTGTGG+AGG | 0.636318 | 7_4:+54567886 | Msa1163350:CDS |
| AGATTTGCTCATAGGATTGG+GGG | 0.646213 | 7_4:+54574692 | Msa1163350:CDS |
| GAAGGCATGCATGAAGAATG+AGG | 0.646788 | 7_4:-54567092 | None:intergenic |
| ACATTGTGCAGCAACTAGAG+TGG | 0.648949 | 7_4:-54567879 | None:intergenic |
| TAGTGATCGATAACGACACA+AGG | 0.654030 | 7_4:-54570086 | None:intergenic |
| ATATGATATCTGGACTCAAG+GGG | 0.656490 | 7_4:+54569253 | Msa1163350:CDS |
| ATAGTGATCAGAGATTTCGA+TGG | 0.656718 | 7_4:-54570132 | None:intergenic |
| AGAAATTCCATAGGAACTCG+AGG | 0.657611 | 7_4:-54567002 | None:intergenic |
| AATGGTGGAAGAGCAAATGC+TGG | 0.658370 | 7_4:+54567623 | Msa1163350:CDS |
| TTCTGCTATAGCTGCCATCG+CGG | 0.658786 | 7_4:+54567781 | Msa1163350:CDS |
| TCGGATTGAAAACAGACTCG+AGG | 0.660819 | 7_4:+54569195 | Msa1163350:CDS |
| TTAGATGCGTTATTATCCGA+CGG | 0.662367 | 7_4:-54570057 | None:intergenic |
| TGAGGTGGTTGAGAATGAGC+TGG | 0.666197 | 7_4:-54567074 | None:intergenic |
| GACCTAAAACTGTAGGAAGG+TGG | 0.671239 | 7_4:+54567672 | Msa1163350:CDS |
| GGTATCAATCAACACTCCAA+GGG | 0.673986 | 7_4:+54569858 | Msa1163350:CDS |
| GACCTTGACAGAAATTCCAT+AGG | 0.674441 | 7_4:-54567011 | None:intergenic |
| CCTTGATATGTAGCTCTCCG+AGG | 0.677249 | 7_4:+54568493 | Msa1163350:intron |
| CAGGACCTAAAACTGTAGGA+AGG | 0.679190 | 7_4:+54567669 | Msa1163350:CDS |
| ACTAACATCCAATTCATAGG+TGG | 0.680779 | 7_4:+54570003 | Msa1163350:CDS |
| GAAGATGGCCAAGACAGACG+TGG | 0.685054 | 7_4:+54567841 | Msa1163350:CDS |
| CGTCCTGAATCGGTTCCGAG+TGG | 0.686606 | 7_4:+54566957 | Msa1163350:CDS |
| CCATTGGAGAAAGGAATGGG+AGG | 0.688222 | 7_4:+54568574 | Msa1163350:CDS |
| TCGAGGACTCTCCGGCAGAG+GGG | 0.689304 | 7_4:-54566985 | None:intergenic |
| AGCTGACCACCGATGCAAGG+TGG | 0.692885 | 7_4:-54567937 | None:intergenic |
| AGCAGCGAACCTTTGAACGG+TGG | 0.695192 | 7_4:+54567396 | Msa1163350:CDS |
| TGTGCACGGATTTACCAGCA+TGG | 0.708131 | 7_4:+54569129 | Msa1163350:CDS |
| GCTGTGAAGGACTTATGGAA+TGG | 0.718299 | 7_4:+54568538 | Msa1163350:CDS |
| GCTGCACGCTACAATTACTG+TGG | 0.727804 | 7_4:+54567748 | Msa1163350:CDS |
| AGTGATCGATAACGACACAA+GGG | 0.740645 | 7_4:-54570085 | None:intergenic |
| GGATTGAAAACAGACTCGAG+GGG | 0.769794 | 7_4:+54569197 | Msa1163350:CDS |
| GGCATGCATGAAGAATGAGG+TGG | 0.810503 | 7_4:-54567089 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATTATATATGTAAC+AGG | + | chr7_4:54567338-54567357 | Msa1163350:intron | 10.0% |
| !! | TCAATATTAAATATTTGTTT+CGG | + | chr7_4:54571263-54571282 | Msa1163350:intron | 10.0% |
| !! | AGAATTAATTAATAAAAATC+AGG | + | chr7_4:54571646-54571665 | Msa1163350:intron | 10.0% |
| !!! | AAAACAATTAAATTCTGTTT+TGG | + | chr7_4:54568811-54568830 | Msa1163350:intron | 15.0% |
| !!! | TATTTTGTTTCTTCATAATT+CGG | - | chr7_4:54571166-54571185 | Msa1163360:intron | 15.0% |
| !!! | TTAATAATTTTTAAAAGGTG+TGG | - | chr7_4:54571360-54571379 | Msa1163360:intron | 15.0% |
| !!! | GTAGGTTAATAATTTTTAAA+AGG | - | chr7_4:54571365-54571384 | Msa1163360:intron | 15.0% |
| !!! | TCAATTTTCAATAACAATTA+GGG | - | chr7_4:54571502-54571521 | Msa1163360:intron | 15.0% |
| !!! | TTCAATTTTCAATAACAATT+AGG | - | chr7_4:54571503-54571522 | Msa1163360:intron | 15.0% |
| !!! | TTTTGAAGTAAATTAATAGA+AGG | - | chr7_4:54571560-54571579 | Msa1163360:intron | 15.0% |
| !!! | TTTTTTTTTTACAAGATACT+AGG | + | chr7_4:54572204-54572223 | Msa1163350:intron | 15.0% |
| !!! | TTTTTTTTTACAAGATACTA+GGG | + | chr7_4:54572205-54572224 | Msa1163350:intron | 15.0% |
| !! | TTGAATATAATTGTATTTGT+TGG | + | chr7_4:54572499-54572518 | Msa1163350:intron | 15.0% |
| !!! | ATTTTTAAATTGTTGATTAC+TGG | + | chr7_4:54573456-54573475 | Msa1163350:intron | 15.0% |
| !!! | AGTTCTATATTTTTACTATG+TGG | + | chr7_4:54567528-54567547 | Msa1163350:intron | 20.0% |
| !! | GCATCTATTTCATAATATAA+TGG | + | chr7_4:54568046-54568065 | Msa1163350:intron | 20.0% |
| !! | TGTATTTAACTAAAATTCTC+TGG | - | chr7_4:54568115-54568134 | None:intergenic | 20.0% |
| !!! | ACATTTTAATGGTTTATTGT+AGG | - | chr7_4:54568240-54568259 | None:intergenic | 20.0% |
| !!! | AATAGTCTTAGACATTTTAA+TGG | - | chr7_4:54568251-54568270 | None:intergenic | 20.0% |
| !!! | ATTTAATTAGCGATTTTGTA+TGG | - | chr7_4:54568343-54568362 | None:intergenic | 20.0% |
| !! | TTAATAGCATAATCTGTAAT+TGG | - | chr7_4:54568769-54568788 | None:intergenic | 20.0% |
| !! | TATTAAGACTACAAAATTTC+TGG | + | chr7_4:54568783-54568802 | Msa1163350:intron | 20.0% |
| !!! | ATAAAGTGTTGAATCAAATT+TGG | - | chr7_4:54569358-54569377 | None:intergenic | 20.0% |
| !! | TTGTAATATCTATATACCAA+AGG | - | chr7_4:54569526-54569545 | None:intergenic | 20.0% |
| !!! | TTTTAAAATGAACTCATACT+TGG | + | chr7_4:54569628-54569647 | Msa1163350:intron | 20.0% |
| !!! | ATTGTAGCTATTACATTTTA+TGG | - | chr7_4:54570836-54570855 | Msa1163360:CDS | 20.0% |
| !!! | GGTTTTGAATTATTTTGAAT+TGG | - | chr7_4:54571228-54571247 | Msa1163360:intron | 20.0% |
| !!! | TATTGATTATTGATTTTGAG+TGG | - | chr7_4:54571249-54571268 | Msa1163360:intron | 20.0% |
| !! | TCCAAATAATAAAATACTCA+CGG | - | chr7_4:54571430-54571449 | Msa1163360:intron | 20.0% |
| !!! | GAGTATTTTATTATTTGGAT+CGG | + | chr7_4:54571431-54571450 | Msa1163350:intron | 20.0% |
| !! | TTTCAGTAATGATTTACTAT+TGG | - | chr7_4:54571603-54571622 | Msa1163360:intron | 20.0% |
| !!! | ATTCATCCTTTTTGTTTTTA+GGG | + | chr7_4:54572577-54572596 | Msa1163350:intron | 20.0% |
| !! | TGAGTTACATATTATATAGT+AGG | + | chr7_4:54573364-54573383 | Msa1163350:intron | 20.0% |
| !! | GAGTTACATATTATATAGTA+GGG | + | chr7_4:54573365-54573384 | Msa1163350:intron | 20.0% |
| !!! | GTTAATTTTGATCTTAATGT+TGG | + | chr7_4:54573429-54573448 | Msa1163350:intron | 20.0% |
| !! | TACTATATAGGAAAATTCTA+CGG | - | chr7_4:54573792-54573811 | Msa1163360:intron | 20.0% |
| !! | TTGTAATATCTATATACCAA+AGG | - | chr7_4:54569526-54569545 | None:intergenic | 20.0% |
| ! | AATTCATCTGAATGAGAAAT+TGG | - | chr7_4:54567447-54567466 | None:intergenic | 25.0% |
| ! | AAATTCATCAACACAAAACA+AGG | + | chr7_4:54567814-54567833 | Msa1163350:CDS | 25.0% |
| ! | ATCACAATTCTTGATATTAC+AGG | + | chr7_4:54568146-54568165 | Msa1163350:intron | 25.0% |
| ! | TTACATAAACTGCGAATATA+AGG | - | chr7_4:54568461-54568480 | None:intergenic | 25.0% |
| ! | CAGTTTATGTAATGTGTATA+TGG | + | chr7_4:54568469-54568488 | Msa1163350:intron | 25.0% |
| !! | TTATTACCTTTTCCAGATAT+TGG | - | chr7_4:54568604-54568623 | None:intergenic | 25.0% |
| !! | ATAATGATAATGTACCGTTA+CGG | - | chr7_4:54568744-54568763 | None:intergenic | 25.0% |
| ! | ATCAAAGAGAATATGATATC+TGG | + | chr7_4:54569243-54569262 | Msa1163350:CDS | 25.0% |
| !! | ATTGACAACTATTCAAGTTA+CGG | - | chr7_4:54569447-54569466 | None:intergenic | 25.0% |
| ! | CAAAATGCGAAAAGTAATTA+CGG | + | chr7_4:54569575-54569594 | Msa1163350:intron | 25.0% |
| ! | AAAATGCGAAAAGTAATTAC+GGG | + | chr7_4:54569576-54569595 | Msa1163350:intron | 25.0% |
| ! | ATATGAATCGTTAAAGTCTA+CGG | + | chr7_4:54569729-54569748 | Msa1163350:CDS | 25.0% |
| !!! | TGTTAATTTTGAGAATCGAA+TGG | + | chr7_4:54570226-54570245 | Msa1163350:intron | 25.0% |
| !! | TGTCAAATTTAACTGATTCT+AGG | + | chr7_4:54570500-54570519 | Msa1163350:intron | 25.0% |
| !! | AAGAAGTATACATAAGTAGA+AGG | + | chr7_4:54570736-54570755 | Msa1163350:intron | 25.0% |
| !! | AGAAGTATACATAAGTAGAA+GGG | + | chr7_4:54570737-54570756 | Msa1163350:intron | 25.0% |
| ! | ACTTAACCTACAACAAAAAA+AGG | + | chr7_4:54570894-54570913 | Msa1163350:intron | 25.0% |
| !!! | TTTGATCCTTTTTTTGTTGT+AGG | - | chr7_4:54570903-54570922 | Msa1163360:intron | 25.0% |
| !!! | ATATCAAAAGCACTACTATA+AGG | + | chr7_4:54570933-54570952 | Msa1163350:intron | 25.0% |
| !!! | TATCAAAAGCACTACTATAA+GGG | + | chr7_4:54570934-54570953 | Msa1163350:intron | 25.0% |
| !! | CTTGATTCTTTACACATTTT+GGG | - | chr7_4:54571089-54571108 | Msa1163360:CDS | 25.0% |
| ! | TGATATAACAGATACTAGAA+TGG | + | chr7_4:54571129-54571148 | Msa1163350:intron | 25.0% |
| !!! | AATTTTTAAAAGGTGTGGTT+CGG | - | chr7_4:54571355-54571374 | Msa1163360:intron | 25.0% |
| ! | ATAATAAAATACTCACGGTT+TGG | - | chr7_4:54571425-54571444 | Msa1163360:intron | 25.0% |
| !! | ACCGTGAGTATTTTATTATT+TGG | + | chr7_4:54571426-54571445 | Msa1163350:intron | 25.0% |
| ! | TTGTTATGACAATAGTAAAG+TGG | + | chr7_4:54571774-54571793 | Msa1163350:intron | 25.0% |
| ! | TTGAAGAAGAAATTAGCAAT+GGG | + | chr7_4:54571955-54571974 | Msa1163350:intron | 25.0% |
| ! | ACTTATTCAACTAGAAAAGA+AGG | - | chr7_4:54572259-54572278 | Msa1163360:intron | 25.0% |
| ! | CAAAAACAAACGAAAAAAGA+CGG | - | chr7_4:54572298-54572317 | Msa1163360:intron | 25.0% |
| ! | TCAAATCTGATAAATGACTT+TGG | + | chr7_4:54572432-54572451 | Msa1163350:intron | 25.0% |
| !!! | GATTCATCCTTTTTGTTTTT+AGG | + | chr7_4:54572576-54572595 | Msa1163350:intron | 25.0% |
| !!! | ATCCTTTTTGATGACATATA+TGG | + | chr7_4:54573077-54573096 | Msa1163350:intron | 25.0% |
| ! | ATACTGTGTTGAAACAAATT+TGG | - | chr7_4:54573270-54573289 | Msa1163360:intron | 25.0% |
| !! | ATTGACAACTATTCAAGTTA+AGG | - | chr7_4:54569447-54569466 | None:intergenic | 25.0% |
| ! | AAAATGCGATAAAGTAATTG+CGG | + | chr7_4:54573903-54573922 | Msa1163350:intron | 25.0% |
| ! | ACTAAGAGACAATTACTATA+TGG | + | chr7_4:54573975-54573994 | Msa1163350:intron | 25.0% |
| ! | AAATGAATCTTGTCATTCTT+TGG | - | chr7_4:54574149-54574168 | Msa1163360:intron | 25.0% |
| !!! | TGTTAGTTTTGAGAATAGAA+TGG | + | chr7_4:54574551-54574570 | Msa1163350:intron | 25.0% |
| !! | TAAGCTTTATCTTGTTCATT+TGG | - | chr7_4:54574664-54574683 | Msa1163360:intron | 25.0% |
| !!! | CAATGTATGTGCAGTTTTTT+CGG | + | chr7_4:54567573-54567592 | Msa1163350:intron | 30.0% |
| AAATAGATGCTCAATGATGT+GGG | - | chr7_4:54568036-54568055 | None:intergenic | 30.0% | |
| GCATAATCTAAATGTCTTAG+TGG | - | chr7_4:54568279-54568298 | None:intergenic | 30.0% | |
| AGACATTTAGATTATGCTCT+TGG | + | chr7_4:54568282-54568301 | Msa1163350:intron | 30.0% | |
| ! | AATTAGCGATTTTGTATGGT+TGG | - | chr7_4:54568339-54568358 | None:intergenic | 30.0% |
| ! | CACTTAACTTTAGTTTCACA+AGG | + | chr7_4:54568379-54568398 | Msa1163350:intron | 30.0% |
| ! | TAATGATAATGTACCGTTAC+GGG | - | chr7_4:54568743-54568762 | None:intergenic | 30.0% |
| !!! | ACAATTTTTTTTACCAGCAC+AGG | + | chr7_4:54569053-54569072 | Msa1163350:intron | 30.0% |
| AATATGATATCTGGACTCAA+GGG | + | chr7_4:54569252-54569271 | Msa1163350:CDS | 30.0% | |
| !! | CGTAATTACTTTTCGCATTT+TGG | - | chr7_4:54569577-54569596 | None:intergenic | 30.0% |
| ACTTGGAGACAATTATTACA+TGG | + | chr7_4:54569645-54569664 | Msa1163350:intron | 30.0% | |
| TTTAACGATTCATATGATCC+AGG | - | chr7_4:54569724-54569743 | None:intergenic | 30.0% | |
| CCACACAAAAATAACATATC+CGG | + | chr7_4:54569837-54569856 | Msa1163350:CDS | 30.0% | |
| !! | TGTAAAAACTCTGAAACCAT+TGG | + | chr7_4:54569957-54569976 | Msa1163350:CDS | 30.0% |
| AATTAACACCTTCAGTTGTT+TGG | - | chr7_4:54570214-54570233 | None:intergenic | 30.0% | |
| TAGTTATGTTTGATGCCTTA+AGG | + | chr7_4:54570302-54570321 | Msa1163350:intron | 30.0% | |
| TAAGCTTCATCTTGTTCATT+TGG | - | chr7_4:54570339-54570358 | None:intergenic | 30.0% | |
| ! | TGCTAACAAGCATTTAGAAT+TGG | + | chr7_4:54570467-54570486 | Msa1163350:intron | 30.0% |
| ! | CATTCATCTGAATCTGAAAT+TGG | - | chr7_4:54570553-54570572 | None:intergenic | 30.0% |
| !! | ACAGCTTGTTTTCTATTAAG+CGG | + | chr7_4:54570615-54570634 | Msa1163350:intron | 30.0% |
| TCCATTCACCAATTATTCTT+TGG | + | chr7_4:54570688-54570707 | Msa1163350:intron | 30.0% | |
| ACCAAAGAATAATTGGTGAA+TGG | - | chr7_4:54570692-54570711 | None:intergenic | 30.0% | |
| ATTCACCAATTATTCTTTGG+TGG | + | chr7_4:54570691-54570710 | Msa1163350:intron | 30.0% | |
| GAAGTATACATAAGTAGAAG+GGG | + | chr7_4:54570738-54570757 | Msa1163350:intron | 30.0% | |
| ! | CTCAAATGATGAGTACATTT+TGG | - | chr7_4:54570789-54570808 | Msa1163360:CDS | 30.0% |
| TTGTAGGTTAAGTTTCCATT+GGG | - | chr7_4:54570887-54570906 | Msa1163360:intron | 30.0% | |
| !!! | TTTTTACACCGATTCTTGTT+CGG | - | chr7_4:54571040-54571059 | Msa1163360:CDS | 30.0% |
| ! | GCTTGATTCTTTACACATTT+TGG | - | chr7_4:54571090-54571109 | Msa1163360:CDS | 30.0% |
| CACCATAAACAAGAAACAAT+CGG | + | chr7_4:54571287-54571306 | Msa1163350:intron | 30.0% | |
| ! | AACCGATTGTTTCTTGTTTA+TGG | - | chr7_4:54571292-54571311 | Msa1163360:intron | 30.0% |
| TAAACAAGAAACAATCGGTT+TGG | + | chr7_4:54571292-54571311 | Msa1163350:intron | 30.0% | |
| ! | TTCGATTTGAATCGGTTATA+AGG | - | chr7_4:54571470-54571489 | Msa1163360:intron | 30.0% |
| ! | AATAACAATTAGGGTGTTTG+CGG | - | chr7_4:54571493-54571512 | Msa1163360:intron | 30.0% |
| GAGAAGAGAATTGATTAAGT+TGG | - | chr7_4:54571538-54571557 | Msa1163360:intron | 30.0% | |
| !! | TTTTCCAATTGGATTGACTT+GGG | - | chr7_4:54571706-54571725 | Msa1163360:CDS | 30.0% |
| ! | AATTGGAAAAGGTATAACGA+CGG | + | chr7_4:54571716-54571735 | Msa1163350:intron | 30.0% |
| GTTGAAGAAGAAATTAGCAA+TGG | + | chr7_4:54571954-54571973 | Msa1163350:intron | 30.0% | |
| ACATTTAAGCAAGGATACTA+GGG | + | chr7_4:54572139-54572158 | Msa1163350:intron | 30.0% | |
| GAAAAAAGACGGAAAATATG+TGG | - | chr7_4:54572287-54572306 | Msa1163360:intron | 30.0% | |
| AAAAATACACTGCACAAAAC+GGG | - | chr7_4:54572357-54572376 | Msa1163360:intron | 30.0% | |
| CAAAAATACACTGCACAAAA+CGG | - | chr7_4:54572358-54572377 | Msa1163360:intron | 30.0% | |
| ATCAAATAAACACTGCAGAT+GGG | - | chr7_4:54572385-54572404 | Msa1163360:intron | 30.0% | |
| GTTTAAATCATCTTTCAACC+CGG | - | chr7_4:54572408-54572427 | Msa1163360:intron | 30.0% | |
| TGTTAATAGGATAAACGACA+AGG | - | chr7_4:54572533-54572552 | Msa1163360:intron | 30.0% | |
| ! | TGTCGTTTATCCTATTAACA+TGG | + | chr7_4:54572533-54572552 | Msa1163350:intron | 30.0% |
| CTCATAACATCCATGTTAAT+AGG | - | chr7_4:54572546-54572565 | Msa1163360:intron | 30.0% | |
| CAAAGTCCCTAAAAACAAAA+AGG | - | chr7_4:54572586-54572605 | Msa1163360:intron | 30.0% | |
| !!! | CTTTTTGTTTTTAGGGACTT+TGG | + | chr7_4:54572584-54572603 | Msa1163350:intron | 30.0% |
| ! | TGCAATTTTACAAGCATAAC+TGG | - | chr7_4:54572778-54572797 | Msa1163360:intron | 30.0% |
| TAGATCCAAACTCAAATACA+TGG | - | chr7_4:54572832-54572851 | Msa1163360:intron | 30.0% | |
| ! | ATTTGAGTTTGGATCTAGAT+AGG | + | chr7_4:54572835-54572854 | Msa1163350:intron | 30.0% |
| ! | TTTGAGTTTGGATCTAGATA+GGG | + | chr7_4:54572836-54572855 | Msa1163350:intron | 30.0% |
| TGAAAGTCATTCCATGTATT+TGG | + | chr7_4:54572872-54572891 | Msa1163350:intron | 30.0% | |
| GAAAGTCATTCCATGTATTT+GGG | + | chr7_4:54572873-54572892 | Msa1163350:intron | 30.0% | |
| TTGAAGATATGTGATCAAAG+AGG | - | chr7_4:54573054-54573073 | Msa1163360:intron | 30.0% | |
| ATCAAATAGAGTATGATGTC+TGG | + | chr7_4:54573155-54573174 | Msa1163350:intron | 30.0% | |
| !!! | ACTCTCATTTTGTTATTGCT+AGG | + | chr7_4:54573242-54573261 | Msa1163350:intron | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr7_4:54573593-54573612 | Msa1163350:intron | 30.0% | |
| ACGGTACAATGTTACTATAT+AGG | - | chr7_4:54573804-54573823 | Msa1163360:intron | 30.0% | |
| ! | GCAATAGAGTGTTTATAAGA+CGG | - | chr7_4:54573823-54573842 | Msa1163360:intron | 30.0% |
| ! | GCAATTACTTTATCGCATTT+TGG | - | chr7_4:54573904-54573923 | Msa1163360:intron | 30.0% |
| AAATGCGATAAAGTAATTGC+GGG | + | chr7_4:54573904-54573923 | Msa1163350:intron | 30.0% | |
| TTCAGTGATTAATATGATCC+AGG | - | chr7_4:54574046-54574065 | Msa1163360:intron | 30.0% | |
| ATATTAATCACTGAAGACTG+CGG | + | chr7_4:54574051-54574070 | Msa1163350:intron | 30.0% | |
| ! | CAAAATCCTCAAGAGTATAA+AGG | - | chr7_4:54574082-54574101 | Msa1163360:intron | 30.0% |
| ATATCCAGTATCTATCAATC+AGG | + | chr7_4:54574208-54574227 | Msa1163350:CDS | 30.0% | |
| TATCCAGTATCTATCAATCA+GGG | + | chr7_4:54574209-54574228 | Msa1163350:CDS | 30.0% | |
| TTTCACAAATATAATGCTGC+AGG | - | chr7_4:54574300-54574319 | Msa1163360:intron | 30.0% | |
| GATGATGATCTTAGTTATGT+TGG | + | chr7_4:54570291-54570310 | Msa1163350:intron | 30.0% | |
| TTCCTATGGAATTTCTGTCA+AGG | + | chr7_4:54567009-54567028 | Msa1163350:intron | 35.0% | |
| TCAGGAATAGAACCATTTGA+AGG | - | chr7_4:54567113-54567132 | None:intergenic | 35.0% | |
| TTCAGATAAAGAGTGGTTAG+TGG | - | chr7_4:54567141-54567160 | None:intergenic | 35.0% | |
| AGAGATCTTCAGATAAAGAG+TGG | - | chr7_4:54567148-54567167 | None:intergenic | 35.0% | |
| TGAATGTGATTGTGTCTTTG+TGG | - | chr7_4:54567281-54567300 | None:intergenic | 35.0% | |
| GATAATCTACCTGACGTTAA+TGG | - | chr7_4:54567372-54567391 | None:intergenic | 35.0% | |
| TGAATTTGACGATGTTGTCA+AGG | + | chr7_4:54567461-54567480 | Msa1163350:CDS | 35.0% | |
| AAAACTGCACATACATTGAC+AGG | - | chr7_4:54567571-54567590 | None:intergenic | 35.0% | |
| TCCATTCACCCATTATTCAA+TGG | + | chr7_4:54567605-54567624 | Msa1163350:CDS | 35.0% | |
| !! | ACCATTGAATAATGGGTGAA+TGG | - | chr7_4:54567609-54567628 | None:intergenic | 35.0% |
| ATTCACCCATTATTCAATGG+TGG | + | chr7_4:54567608-54567627 | Msa1163350:CDS | 35.0% | |
| CTCTTCCACCATTGAATAAT+GGG | - | chr7_4:54567616-54567635 | None:intergenic | 35.0% | |
| ACAAAACAAGGATGAGAAGA+TGG | + | chr7_4:54567826-54567845 | Msa1163350:CDS | 35.0% | |
| GAAATAGATGCTCAATGATG+TGG | - | chr7_4:54568037-54568056 | None:intergenic | 35.0% | |
| GGAATCAATGTTTCATATCG+CGG | + | chr7_4:54568067-54568086 | Msa1163350:intron | 35.0% | |
| TTAGATTATGCTCTTGGACA+AGG | + | chr7_4:54568288-54568307 | Msa1163350:intron | 35.0% | |
| GGTATACCAATATCTGGAAA+AGG | + | chr7_4:54568595-54568614 | Msa1163350:CDS | 35.0% | |
| !!! | GTGAATGCAGATGGTTTTAT+AGG | + | chr7_4:54568667-54568686 | Msa1163350:CDS | 35.0% |
| TCTGTTTACATACATCGAAC+AGG | + | chr7_4:54568869-54568888 | Msa1163350:CDS | 35.0% | |
| GAATATGATATCTGGACTCA+AGG | + | chr7_4:54569251-54569270 | Msa1163350:CDS | 35.0% | |
| ATATGATATCTGGACTCAAG+GGG | + | chr7_4:54569253-54569272 | Msa1163350:CDS | 35.0% | |
| ACTAGCAATAACAGAATGAG+AGG | - | chr7_4:54569333-54569352 | None:intergenic | 35.0% | |
| CACTCTTTCACTATTTCCTT+TGG | + | chr7_4:54569507-54569526 | Msa1163350:intron | 35.0% | |
| TTGAGTTATTCAAAGAGACC+TGG | + | chr7_4:54569703-54569722 | Msa1163350:intron | 35.0% | |
| ACAAAATCGTCAAGTGTAGA+AGG | - | chr7_4:54569760-54569779 | None:intergenic | 35.0% | |
| !!! | CCGGATATGTTATTTTTGTG+TGG | - | chr7_4:54569840-54569859 | None:intergenic | 35.0% |
| ! | TTTTTACAAATGCTGCAGGT+TGG | - | chr7_4:54569945-54569964 | None:intergenic | 35.0% |
| ! | AGAGTTTTTACAAATGCTGC+AGG | - | chr7_4:54569949-54569968 | None:intergenic | 35.0% |
| GAGATACAATGGAAATCCAA+TGG | - | chr7_4:54569976-54569995 | None:intergenic | 35.0% | |
| TAGTTGCTTCAGAGATACAA+TGG | - | chr7_4:54569987-54570006 | None:intergenic | 35.0% | |
| GCAACTAACATCCAATTCAT+AGG | + | chr7_4:54570000-54570019 | Msa1163350:CDS | 35.0% | |
| ACTAACATCCAATTCATAGG+TGG | + | chr7_4:54570003-54570022 | Msa1163350:CDS | 35.0% | |
| TTAGATGCGTTATTATCCGA+CGG | - | chr7_4:54570060-54570079 | None:intergenic | 35.0% | |
| ATAGTGATCAGAGATTTCGA+TGG | - | chr7_4:54570135-54570154 | None:intergenic | 35.0% | |
| !! | ATTTTGAGAATCGAATGGTC+TGG | + | chr7_4:54570231-54570250 | Msa1163350:intron | 35.0% |
| ! | TCTCATAGAGATTTGCTCAT+AGG | + | chr7_4:54570361-54570380 | Msa1163350:intron | 35.0% |
| ! | AGAGATTTGCTCATAGGATT+AGG | + | chr7_4:54570367-54570386 | Msa1163350:intron | 35.0% |
| ! | GAGATTTGCTCATAGGATTA+GGG | + | chr7_4:54570368-54570387 | Msa1163350:intron | 35.0% |
| ! | AGATTTGCTCATAGGATTAG+GGG | + | chr7_4:54570369-54570388 | Msa1163350:intron | 35.0% |
| ATTCTAGGTTAAGTCGAAGA+CGG | + | chr7_4:54570515-54570534 | Msa1163350:intron | 35.0% | |
| TGAATGTGACGATGTTGTTA+AGG | + | chr7_4:54570567-54570586 | Msa1163350:intron | 35.0% | |
| !!! | TTTCTTGTGCAGTTTTTTCG+CGG | + | chr7_4:54570655-54570674 | Msa1163350:intron | 35.0% |
| CTCTTCCACCAAAGAATAAT+TGG | - | chr7_4:54570699-54570718 | None:intergenic | 35.0% | |
| !!! | TGATGAGTACATTTTGGCTT+CGG | - | chr7_4:54570783-54570802 | Msa1163360:CDS | 35.0% |
| GCTACATTATCTTTGACAAG+AGG | - | chr7_4:54570814-54570833 | Msa1163360:CDS | 35.0% | |
| AGTTGTCACATGTGATCTAT+GGG | - | chr7_4:54570862-54570881 | Msa1163360:CDS | 35.0% | |
| AAGTTGTCACATGTGATCTA+TGG | - | chr7_4:54570863-54570882 | Msa1163360:CDS | 35.0% | |
| GTTGTAGGTTAAGTTTCCAT+TGG | - | chr7_4:54570888-54570907 | Msa1163360:intron | 35.0% | |
| TATTCTCTTTGCTCTGATTC+TGG | - | chr7_4:54571002-54571021 | Msa1163360:CDS | 35.0% | |
| GAATCAGAGCAAAGAGAATA+AGG | + | chr7_4:54571002-54571021 | Msa1163350:intron | 35.0% | |
| ! | GAAATCATGACCTCTTTTTG+TGG | + | chr7_4:54571063-54571082 | Msa1163350:intron | 35.0% |
| TTTCTTCATAATTCGGATGC+AGG | - | chr7_4:54571159-54571178 | Msa1163360:intron | 35.0% | |
| ! | CGATTGTTTCTTGTTTATGG+TGG | - | chr7_4:54571289-54571308 | Msa1163360:intron | 35.0% |
| !! | AAGAAACAATCGGTTTGGTT+TGG | + | chr7_4:54571297-54571316 | Msa1163350:intron | 35.0% |
| !!! | AATCGGTTTGGTTTGGATTT+TGG | + | chr7_4:54571304-54571323 | Msa1163350:intron | 35.0% |
| !! | AAAATACTCACGGTTTGGTT+TGG | - | chr7_4:54571420-54571439 | Msa1163360:intron | 35.0% |
| ! | CTTTTCCAATTGGATTGACT+TGG | - | chr7_4:54571707-54571726 | Msa1163360:CDS | 35.0% |
| CAAGTCAATCCAATTGGAAA+AGG | + | chr7_4:54571705-54571724 | Msa1163350:intron | 35.0% | |
| ! | GTCGTTATACCTTTTCCAAT+TGG | - | chr7_4:54571717-54571736 | Msa1163360:CDS | 35.0% |
| GTATAACGACGGTGAAAATT+AGG | + | chr7_4:54571727-54571746 | Msa1163350:intron | 35.0% | |
| ACAGAACACGTACTTATGAA+TGG | + | chr7_4:54571889-54571908 | Msa1163350:intron | 35.0% | |
| TTATGAATGGAACAGAGAGA+AGG | + | chr7_4:54571902-54571921 | Msa1163350:intron | 35.0% | |
| TTCTTCTTCAACTCCAAACT+AGG | - | chr7_4:54571946-54571965 | Msa1163360:CDS | 35.0% | |
| AAGAAGGACCATCTTAATTC+AGG | + | chr7_4:54572054-54572073 | Msa1163350:intron | 35.0% | |
| AGAAGGACCATCTTAATTCA+GGG | + | chr7_4:54572055-54572074 | Msa1163350:intron | 35.0% | |
| CTTGCTTAAATGTCTGGAAA+TGG | - | chr7_4:54572132-54572151 | Msa1163360:intron | 35.0% | |
| CATTTCCAGACATTTAAGCA+AGG | + | chr7_4:54572130-54572149 | Msa1163350:intron | 35.0% | |
| AGTATCCTTGCTTAAATGTC+TGG | - | chr7_4:54572138-54572157 | Msa1163360:intron | 35.0% | |
| GACATTTAAGCAAGGATACT+AGG | + | chr7_4:54572138-54572157 | Msa1163350:intron | 35.0% | |
| ATTAGAAGAATGCAGAAGCA+AGG | + | chr7_4:54572166-54572185 | Msa1163350:intron | 35.0% | |
| GATCAAATAAACACTGCAGA+TGG | - | chr7_4:54572386-54572405 | Msa1163360:intron | 35.0% | |
| TCTGCAGTGTTTATTTGATC+CGG | + | chr7_4:54572386-54572405 | Msa1163350:intron | 35.0% | |
| AACGTTAAGCTCAACTGTAA+AGG | + | chr7_4:54572682-54572701 | Msa1163350:intron | 35.0% | |
| TAGAAACACTCCCAAATACA+TGG | - | chr7_4:54572886-54572905 | Msa1163360:intron | 35.0% | |
| AGGTGCAAATTAACCATACT+TGG | + | chr7_4:54572934-54572953 | Msa1163350:intron | 35.0% | |
| !!! | CTTTGAACGCTTTTGATTTG+TGG | + | chr7_4:54573002-54573021 | Msa1163350:intron | 35.0% |
| CGCCATATATGTCATCAAAA+AGG | - | chr7_4:54573082-54573101 | Msa1163360:intron | 35.0% | |
| AGTATGATGTCTGGACTTAA+GGG | + | chr7_4:54573164-54573183 | Msa1163350:intron | 35.0% | |
| TATATAGTAGGGAGCTTCTA+CGG | + | chr7_4:54573376-54573395 | Msa1163350:intron | 35.0% | |
| TAGTAATGCTTGCAACATCT+TGG | + | chr7_4:54573502-54573521 | Msa1163350:intron | 35.0% | |
| ! | TACGGGTACTATTTTATCGT+TGG | + | chr7_4:54573528-54573547 | Msa1163350:intron | 35.0% |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr7_4:54573592-54573611 | Msa1163350:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr7_4:54573594-54573613 | Msa1163350:intron | 35.0% | |
| GATGAATTGACGATACTATG+AGG | + | chr7_4:54573673-54573692 | Msa1163350:intron | 35.0% | |
| !! | CACTCTATTGCTATTTCCTT+TGG | + | chr7_4:54573832-54573851 | Msa1163350:intron | 35.0% |
| TTGTCATTCTTTGGACTAAG+GGG | - | chr7_4:54574140-54574159 | Msa1163360:intron | 35.0% | |
| CTTGTCATTCTTTGGACTAA+GGG | - | chr7_4:54574141-54574160 | Msa1163360:intron | 35.0% | |
| TCTTGTCATTCTTTGGACTA+AGG | - | chr7_4:54574142-54574161 | Msa1163360:intron | 35.0% | |
| ! | ATTTTTGTGTGATGTCGAGA+TGG | - | chr7_4:54574185-54574204 | Msa1163360:intron | 35.0% |
| ACAAATATAATGCTGCAGGT+TGG | - | chr7_4:54574296-54574315 | Msa1163360:intron | 35.0% | |
| TGTGAAAACTTTGAACCCAT+TGG | + | chr7_4:54574313-54574332 | Msa1163350:intron | 35.0% | |
| AGATACAACGGAAATCCAAT+GGG | - | chr7_4:54574331-54574350 | Msa1163360:intron | 35.0% | |
| TAGTTGCTTCAGAGATACAA+CGG | - | chr7_4:54569987-54570006 | None:intergenic | 35.0% | |
| GCAACTAACATCCAATTCAT+AGG | + | chr7_4:54570000-54570019 | Msa1163350:CDS | 35.0% | |
| ACTAACATCCAATTCATAGG+TGG | + | chr7_4:54570003-54570022 | Msa1163350:CDS | 35.0% | |
| TTAGATGCGTTATTATCCAG+CGG | - | chr7_4:54574416-54574435 | Msa1163360:intron | 35.0% | |
| AACTAACACCTTCAGTTGTT+TGG | - | chr7_4:54574539-54574558 | Msa1163360:intron | 35.0% | |
| TAGTTATGTTGGATGCCTTA+AGG | + | chr7_4:54574627-54574646 | Msa1163350:intron | 35.0% | |
| ! | TATCTCAGAGATTTGCTCAT+AGG | + | chr7_4:54574684-54574703 | Msa1163350:CDS | 35.0% |
| ! | AGAGATTTGCTCATAGGATT+GGG | + | chr7_4:54570367-54570386 | Msa1163350:intron | 35.0% |
| AGAAATTCCATAGGAACTCG+AGG | - | chr7_4:54567005-54567024 | None:intergenic | 40.0% | |
| GACCTTGACAGAAATTCCAT+AGG | - | chr7_4:54567014-54567033 | None:intergenic | 40.0% | |
| TGGAATTTCTGTCAAGGTCA+TGG | + | chr7_4:54567015-54567034 | Msa1163350:intron | 40.0% | |
| TCTTCATGCATGCCTTCAAA+TGG | + | chr7_4:54567098-54567117 | Msa1163350:CDS | 40.0% | |
| GCTCTTCCACCATTGAATAA+TGG | - | chr7_4:54567617-54567636 | None:intergenic | 40.0% | |
| TGTTCAGGACCTAAAACTGT+AGG | + | chr7_4:54567665-54567684 | Msa1163350:CDS | 40.0% | |
| ! | AACCACCTTCCTACAGTTTT+AGG | - | chr7_4:54567677-54567696 | None:intergenic | 40.0% |
| TATGTTTCGATTGCCTCAAG+AGG | - | chr7_4:54568194-54568213 | None:intergenic | 40.0% | |
| AACACCATTGGAGAAAGGAA+TGG | + | chr7_4:54568570-54568589 | Msa1163350:CDS | 40.0% | |
| ACACCATTGGAGAAAGGAAT+GGG | + | chr7_4:54568571-54568590 | Msa1163350:CDS | 40.0% | |
| ! | ATGGGAGGTATACCAATATC+TGG | + | chr7_4:54568589-54568608 | Msa1163350:CDS | 40.0% |
| CACAATTTCTCCACTATCAC+TGG | - | chr7_4:54568650-54568669 | None:intergenic | 40.0% | |
| GGAGAAATTGTGAATGCAGA+TGG | + | chr7_4:54568658-54568677 | Msa1163350:CDS | 40.0% | |
| ! | AGCCAAGAACTACTTGCTAA+GGG | + | chr7_4:54568697-54568716 | Msa1163350:CDS | 40.0% |
| !!! | TCTGTTTTGGTGATAACTGC+AGG | + | chr7_4:54568824-54568843 | Msa1163350:intron | 40.0% |
| TACGTGTTCATTCGTTGACA+AGG | + | chr7_4:54568937-54568956 | Msa1163350:intron | 40.0% | |
| ACAAGGCTTGCAAACATTTC+AGG | + | chr7_4:54568954-54568973 | Msa1163350:intron | 40.0% | |
| ATGAAGAGCAAACATGTTGC+AGG | + | chr7_4:54568988-54569007 | Msa1163350:CDS | 40.0% | |
| ! | TTTTACCAGCACAGGTACAT+AGG | + | chr7_4:54569061-54569080 | Msa1163350:intron | 40.0% |
| TCATCTGATAGATCTCTTCC+TGG | - | chr7_4:54569155-54569174 | None:intergenic | 40.0% | |
| GGAAGAGATCTATCAGATGA+TGG | + | chr7_4:54569155-54569174 | Msa1163350:CDS | 40.0% | |
| CTGCATCTGAGTACTTGATA+TGG | - | chr7_4:54569421-54569440 | None:intergenic | 40.0% | |
| TTTGTGTGGTTGTCATGCTT+TGG | - | chr7_4:54569826-54569845 | None:intergenic | 40.0% | |
| !! | CTTGGAGTGTTGATTGATAC+CGG | - | chr7_4:54569859-54569878 | None:intergenic | 40.0% |
| GGTATCAATCAACACTCCAA+GGG | + | chr7_4:54569858-54569877 | Msa1163350:CDS | 40.0% | |
| !! | TTATTATCCGACGGTTTTGG+TGG | - | chr7_4:54570051-54570070 | None:intergenic | 40.0% |
| AGTGATCGATAACGACACAA+GGG | - | chr7_4:54570088-54570107 | None:intergenic | 40.0% | |
| TAGTGATCGATAACGACACA+AGG | - | chr7_4:54570089-54570108 | None:intergenic | 40.0% | |
| ATCACTGAACCATATGATCC+AGG | + | chr7_4:54570108-54570127 | Msa1163350:CDS | 40.0% | |
| TACTGAGTCCAAACAACTGA+AGG | + | chr7_4:54570203-54570222 | Msa1163350:intron | 40.0% | |
| GGGAGTGATTAAACCAAAAG+CGG | + | chr7_4:54570389-54570408 | Msa1163350:intron | 40.0% | |
| GAAGGGGATGTTCAGATAAA+AGG | + | chr7_4:54570754-54570773 | Msa1163350:intron | 40.0% | |
| ACATGTGACAACTTACCCAA+TGG | + | chr7_4:54570869-54570888 | Msa1163350:intron | 40.0% | |
| ! | ATTCTTGTTCGGAGCTTTGT+TGG | - | chr7_4:54571029-54571048 | Msa1163360:CDS | 40.0% |
| ACAAAGCTCCGAACAAGAAT+CGG | + | chr7_4:54571029-54571048 | Msa1163350:intron | 40.0% | |
| ! | ACATTTTGGGCCACAAAAAG+AGG | - | chr7_4:54571076-54571095 | Msa1163360:CDS | 40.0% |
| ! | GTGACTTGTAGACTAGTAGT+AGG | - | chr7_4:54571383-54571402 | Msa1163360:intron | 40.0% |
| ! | GTTTGCGGTTCGATTTGAAT+CGG | - | chr7_4:54571478-54571497 | Msa1163360:intron | 40.0% |
| TAACGACGGTGAAAATTAGG+AGG | + | chr7_4:54571730-54571749 | Msa1163350:intron | 40.0% | |
| ATCACCATTCAGTTGCTTCT+CGG | - | chr7_4:54572015-54572034 | Msa1163360:CDS | 40.0% | |
| ! | AAGCAACTGAATGGTGATGA+TGG | + | chr7_4:54572017-54572036 | Msa1163350:intron | 40.0% |
| GGAGTATACCTTACGTAAGA+AGG | + | chr7_4:54572038-54572057 | Msa1163350:intron | 40.0% | |
| AAGATGGTCCTTCTTACGTA+AGG | - | chr7_4:54572049-54572068 | Msa1163360:CDS | 40.0% | |
| ATGAGAGCCCTGAATTAAGA+TGG | - | chr7_4:54572065-54572084 | Msa1163360:CDS | 40.0% | |
| AATGCAGAAGCAAGGATACT+AGG | + | chr7_4:54572174-54572193 | Msa1163350:intron | 40.0% | |
| ATGCAGAAGCAAGGATACTA+GGG | + | chr7_4:54572175-54572194 | Msa1163350:intron | 40.0% | |
| CTGCAGTGTTTATTTGATCC+GGG | + | chr7_4:54572387-54572406 | Msa1163350:intron | 40.0% | |
| ! | CTCAATTAACCTTTTCGCTG+TGG | + | chr7_4:54572717-54572736 | Msa1163350:intron | 40.0% |
| ! | AATTAACCTTTTCGCTGTGG+TGG | + | chr7_4:54572720-54572739 | Msa1163350:intron | 40.0% |
| ATGAGTTTCATGCAGAGATG+TGG | + | chr7_4:54572805-54572824 | Msa1163350:intron | 40.0% | |
| TGAGTTTCATGCAGAGATGT+GGG | + | chr7_4:54572806-54572825 | Msa1163350:intron | 40.0% | |
| ! | GGAGTGTTTCTACCTTGATT+CGG | + | chr7_4:54572894-54572913 | Msa1163350:intron | 40.0% |
| CTATTGCTTCACACCAAGTA+TGG | - | chr7_4:54572950-54572969 | Msa1163360:intron | 40.0% | |
| !!! | GGATATTTTGAAGCTCCTAG+AGG | - | chr7_4:54573033-54573052 | Msa1163360:intron | 40.0% |
| TGACATATATGGCGCTACTT+CGG | + | chr7_4:54573088-54573107 | Msa1163350:intron | 40.0% | |
| GAGTATGATGTCTGGACTTA+AGG | + | chr7_4:54573163-54573182 | Msa1163350:intron | 40.0% | |
| GTATGATGTCTGGACTTAAG+GGG | + | chr7_4:54573165-54573184 | Msa1163350:intron | 40.0% | |
| ! | AGTTAAGGAAAGTGCATCTG+AGG | - | chr7_4:54573330-54573349 | Msa1163360:intron | 40.0% |
| CTTGCAACATCTTGGACTTA+CGG | + | chr7_4:54573510-54573529 | Msa1163350:intron | 40.0% | |
| TTGCAACATCTTGGACTTAC+GGG | + | chr7_4:54573511-54573530 | Msa1163350:intron | 40.0% | |
| ! | GTGTTATTCATAAAGCGACC+TGG | + | chr7_4:54574025-54574044 | Msa1163350:intron | 40.0% |
| GATGAGCCTTTATACTCTTG+AGG | + | chr7_4:54574073-54574092 | Msa1163350:CDS | 40.0% | |
| TATTCTGTCTCTGCCATTCT+TGG | + | chr7_4:54574107-54574126 | Msa1163350:CDS | 40.0% | |
| TGTCATTCTTTGGACTAAGG+GGG | - | chr7_4:54574139-54574158 | Msa1163360:intron | 40.0% | |
| ! | AATATAATGCTGCAGGTTGG+TGG | - | chr7_4:54574293-54574312 | Msa1163360:intron | 40.0% |
| GAGATACAACGGAAATCCAA+TGG | - | chr7_4:54574332-54574351 | Msa1163360:intron | 40.0% | |
| !! | TTATTATCCAGCGGTTTTGG+TGG | - | chr7_4:54574407-54574426 | Msa1163360:intron | 40.0% |
| GCTGGATAATAACGCATCTA+AGG | + | chr7_4:54574415-54574434 | Msa1163350:intron | 40.0% | |
| AGTGATCGATAACGACACAA+GGG | - | chr7_4:54570088-54570107 | None:intergenic | 40.0% | |
| TAGTGATCGATAACGACACA+AGG | - | chr7_4:54570089-54570108 | None:intergenic | 40.0% | |
| TACTGAGTCCAAACAACTGA+AGG | + | chr7_4:54570203-54570222 | Msa1163350:intron | 40.0% | |
| ! | CAGAGATTTGCTCATAGGAT+TGG | + | chr7_4:54574689-54574708 | Msa1163350:CDS | 40.0% |
| ! | GAGATTTGCTCATAGGATTG+GGG | + | chr7_4:54574691-54574710 | Msa1163350:CDS | 40.0% |
| ! | AGATTTGCTCATAGGATTGG+GGG | + | chr7_4:54574692-54574711 | Msa1163350:CDS | 40.0% |
| GGGAGTGATTAAACCAAAAG+TGG | + | chr7_4:54570389-54570408 | Msa1163350:intron | 40.0% | |
| !!! | ATCATTAGTCGTGCCACTTT+TGG | - | chr7_4:54574728-54574747 | Msa1163360:intron | 40.0% |
| TCAGGACGCAGACAATTGAT+TGG | - | chr7_4:54566945-54566964 | None:intergenic | 45.0% | |
| CAATTGTCTGCGTCCTGAAT+CGG | + | chr7_4:54566947-54566966 | Msa1163350:CDS | 45.0% | |
| ! | GAAGGCATGCATGAAGAATG+AGG | - | chr7_4:54567095-54567114 | None:intergenic | 45.0% |
| GAGTGGTTAGTGGTTTCTTC+AGG | - | chr7_4:54567131-54567150 | None:intergenic | 45.0% | |
| AGTGTGACATAATGCGCTCA+AGG | - | chr7_4:54567226-54567245 | None:intergenic | 45.0% | |
| TATGTCACACTCTGCTAGAG+AGG | + | chr7_4:54567235-54567254 | Msa1163350:CDS | 45.0% | |
| TGCACATACATTGACAGGAC+AGG | - | chr7_4:54567566-54567585 | None:intergenic | 45.0% | |
| ! | AATGGTGGAAGAGCAAATGC+TGG | + | chr7_4:54567623-54567642 | Msa1163350:CDS | 45.0% |
| CAGGACCTAAAACTGTAGGA+AGG | + | chr7_4:54567669-54567688 | Msa1163350:CDS | 45.0% | |
| GACCTAAAACTGTAGGAAGG+TGG | + | chr7_4:54567672-54567691 | Msa1163350:CDS | 45.0% | |
| ACATTGTGCAGCAACTAGAG+TGG | - | chr7_4:54567882-54567901 | None:intergenic | 45.0% | |
| TCTAGTTGCTGCACAATGTG+TGG | + | chr7_4:54567883-54567902 | Msa1163350:CDS | 45.0% | |
| ! | TGGGCTAATAGTCTTACCTG+TGG | - | chr7_4:54568017-54568036 | None:intergenic | 45.0% |
| ACTGAAAGCTAGAGCTGTGA+AGG | + | chr7_4:54568525-54568544 | Msa1163350:CDS | 45.0% | |
| CTAGAGCTGTGAAGGACTTA+TGG | + | chr7_4:54568533-54568552 | Msa1163350:CDS | 45.0% | |
| GCTGTGAAGGACTTATGGAA+TGG | + | chr7_4:54568538-54568557 | Msa1163350:CDS | 45.0% | |
| GCAGTAACACCATTGGAGAA+AGG | + | chr7_4:54568565-54568584 | Msa1163350:CDS | 45.0% | |
| AACAACAGCTCCAGTGATAG+TGG | + | chr7_4:54568637-54568656 | Msa1163350:CDS | 45.0% | |
| ! | CAGCCAAGAACTACTTGCTA+AGG | + | chr7_4:54568696-54568715 | Msa1163350:CDS | 45.0% |
| TGCCCTTAGCAAGTAGTTCT+TGG | - | chr7_4:54568702-54568721 | None:intergenic | 45.0% | |
| TTACTCAAACGCACCCGTAA+CGG | + | chr7_4:54568727-54568746 | Msa1163350:CDS | 45.0% | |
| TAACTGCAGGTGATCTACAC+TGG | + | chr7_4:54568837-54568856 | Msa1163350:intron | 45.0% | |
| TATGACCTATGTACCTGTGC+TGG | - | chr7_4:54569069-54569088 | None:intergenic | 45.0% | |
| TATTGTGCTAGACGTGTGCA+CGG | + | chr7_4:54569115-54569134 | Msa1163350:CDS | 45.0% | |
| GGAGAAAAACGACGCTACTT+CGG | + | chr7_4:54569176-54569195 | Msa1163350:CDS | 45.0% | |
| TCGGATTGAAAACAGACTCG+AGG | + | chr7_4:54569195-54569214 | Msa1163350:CDS | 45.0% | |
| CGGATTGAAAACAGACTCGA+GGG | + | chr7_4:54569196-54569215 | Msa1163350:CDS | 45.0% | |
| GGATTGAAAACAGACTCGAG+GGG | + | chr7_4:54569197-54569216 | Msa1163350:CDS | 45.0% | |
| TATTCCGTCTCTGCCATTGT+TGG | + | chr7_4:54569784-54569803 | Msa1163350:CDS | 45.0% | |
| CGGTATCAATCAACACTCCA+AGG | + | chr7_4:54569857-54569876 | Msa1163350:CDS | 45.0% | |
| AAAACCGTGTCCTTTGAACG+AGG | - | chr7_4:54569889-54569908 | None:intergenic | 45.0% | |
| ! | TTACAAATGCTGCAGGTTGG+TGG | - | chr7_4:54569942-54569961 | None:intergenic | 45.0% |
| ! | GCGTTATTATCCGACGGTTT+TGG | - | chr7_4:54570054-54570073 | None:intergenic | 45.0% |
| TTCGATGGACCTGGATCATA+TGG | - | chr7_4:54570120-54570139 | None:intergenic | 45.0% | |
| ATCAGAGATTTCGATGGACC+TGG | - | chr7_4:54570129-54570148 | None:intergenic | 45.0% | |
| TTGGATGCACATCTGCCTTA+AGG | - | chr7_4:54570320-54570339 | None:intergenic | 45.0% | |
| !! | TTAAAAGGTGTGGTTCGGTC+TGG | - | chr7_4:54571350-54571369 | Msa1163360:intron | 45.0% |
| AGAGTTACGTACCGCTAAGA+AGG | + | chr7_4:54571679-54571698 | Msa1163350:intron | 45.0% | |
| GAGTTACGTACCGCTAAGAA+GGG | + | chr7_4:54571680-54571699 | Msa1163350:intron | 45.0% | |
| AGGAGGAGGAAGTAATTGAG+AGG | + | chr7_4:54571747-54571766 | Msa1163350:intron | 45.0% | |
| GGAGGAGGAAGTAATTGAGA+GGG | + | chr7_4:54571748-54571767 | Msa1163350:intron | 45.0% | |
| AATGGAGATATCGAGAGTGG+AGG | - | chr7_4:54572114-54572133 | Msa1163360:intron | 45.0% | |
| GGAAATGGAGATATCGAGAG+TGG | - | chr7_4:54572117-54572136 | Msa1163360:intron | 45.0% | |
| TCAAGTCTCATAAACGCTCG+TGG | - | chr7_4:54572483-54572502 | Msa1163360:intron | 45.0% | |
| ! | GTGGGCCATGTATTTGAGTT+TGG | + | chr7_4:54572824-54572843 | Msa1163350:intron | 45.0% |
| GAAGCAATAGAGCAGTGGAT+TGG | + | chr7_4:54572960-54572979 | Msa1163350:intron | 45.0% | |
| ! | TGATTTGTGGAGACTCCTCT+AGG | + | chr7_4:54573015-54573034 | Msa1163350:intron | 45.0% |
| TCGGATTGAAAACAGACTCG+AGG | + | chr7_4:54569195-54569214 | Msa1163350:CDS | 45.0% | |
| CGGATTGAAAACAGACTCGA+GGG | + | chr7_4:54569196-54569215 | Msa1163350:CDS | 45.0% | |
| GGATTGAAAACAGACTCGAG+GGG | + | chr7_4:54569197-54569216 | Msa1163350:CDS | 45.0% | |
| TCTGGACTTAAGGGGTTTCT+AGG | + | chr7_4:54573173-54573192 | Msa1163350:intron | 45.0% | |
| ! | GGGGTGTTACACTTGAAACA+AGG | + | chr7_4:54573613-54573632 | Msa1163350:intron | 45.0% |
| CGACCCTGATTGATAGATAC+TGG | - | chr7_4:54574215-54574234 | Msa1163360:intron | 45.0% | |
| GTATCTATCAATCAGGGTCG+AGG | + | chr7_4:54574215-54574234 | Msa1163350:CDS | 45.0% | |
| ! | GCGTTATTATCCAGCGGTTT+TGG | - | chr7_4:54574410-54574429 | Msa1163360:intron | 45.0% |
| TTGGATGCACATCTGCCTTA+AGG | - | chr7_4:54570320-54570339 | None:intergenic | 45.0% | |
| ATAGGAACTCGAGGACTCTC+CGG | - | chr7_4:54566996-54567015 | None:intergenic | 50.0% | |
| TGAGGTGGTTGAGAATGAGC+TGG | - | chr7_4:54567077-54567096 | None:intergenic | 50.0% | |
| GGCATGCATGAAGAATGAGG+TGG | - | chr7_4:54567092-54567111 | None:intergenic | 50.0% | |
| !! | GAAGTGTCGCCATTAACGTC+AGG | + | chr7_4:54567360-54567379 | Msa1163350:CDS | 50.0% |
| CACAGCAGCGAACCTTTGAA+CGG | + | chr7_4:54567393-54567412 | Msa1163350:CDS | 50.0% | |
| AAAGAACCGCCACCGTTCAA+AGG | - | chr7_4:54567408-54567427 | None:intergenic | 50.0% | |
| ! | AACGGTGGCGGTTCTTTAAC+TGG | + | chr7_4:54567411-54567430 | Msa1163350:CDS | 50.0% |
| GGAAGAGCAAATGCTGGTGT+TGG | + | chr7_4:54567629-54567648 | Msa1163350:CDS | 50.0% | |
| !! | GCAAATGCTGGTGTTGGCAA+TGG | + | chr7_4:54567635-54567654 | Msa1163350:CDS | 50.0% |
| GCTGCACGCTACAATTACTG+TGG | + | chr7_4:54567748-54567767 | Msa1163350:CDS | 50.0% | |
| TTCTGCTATAGCTGCCATCG+CGG | + | chr7_4:54567781-54567800 | Msa1163350:CDS | 50.0% | |
| AGTTGCTGCACAATGTGTGG+AGG | + | chr7_4:54567886-54567905 | Msa1163350:CDS | 50.0% | |
| CTCAAGAGGACTACGATCAG+GGG | - | chr7_4:54568180-54568199 | None:intergenic | 50.0% | |
| CCTCAAGAGGACTACGATCA+GGG | - | chr7_4:54568181-54568200 | None:intergenic | 50.0% | |
| CCTCGGAGAGCTACATATCA+AGG | - | chr7_4:54568496-54568515 | None:intergenic | 50.0% | |
| CCTTGATATGTAGCTCTCCG+AGG | + | chr7_4:54568493-54568512 | Msa1163350:intron | 50.0% | |
| ! | CTTTCAGTGTTGCTGCTCCT+CGG | - | chr7_4:54568513-54568532 | None:intergenic | 50.0% |
| !! | TGGTGCTGCAGTAACACCAT+TGG | + | chr7_4:54568558-54568577 | Msa1163350:CDS | 50.0% |
| CCTCCCATTCCTTTCTCCAA+TGG | - | chr7_4:54568577-54568596 | None:intergenic | 50.0% | |
| CCATTGGAGAAAGGAATGGG+AGG | + | chr7_4:54568574-54568593 | Msa1163350:CDS | 50.0% | |
| AGCAAGTAGTTCTTGGCTGC+AGG | - | chr7_4:54568695-54568714 | None:intergenic | 50.0% | |
| TGTGCACGGATTTACCAGCA+TGG | + | chr7_4:54569129-54569148 | Msa1163350:CDS | 50.0% | |
| TCTGGACTCAAGGGGTTTCT+AGG | + | chr7_4:54569261-54569280 | Msa1163350:CDS | 50.0% | |
| ! | CATGCTTTGGACTGAGCAGA+CGG | - | chr7_4:54569813-54569832 | None:intergenic | 50.0% |
| TGGCGAAGCCACCTATGAAT+TGG | - | chr7_4:54570014-54570033 | None:intergenic | 50.0% | |
| !!! | GTCATTAGTCGTGCCGCTTT+TGG | - | chr7_4:54570405-54570424 | None:intergenic | 50.0% |
| !! | CTGGTTTAGTTCTAGCGTCG+TGG | - | chr7_4:54571331-54571350 | Msa1163360:intron | 50.0% |
| !! | TTGACTTGGGCCCTTCTTAG+CGG | - | chr7_4:54571693-54571712 | Msa1163360:CDS | 50.0% |
| AGGGCCCAAGTCAATCCAAT+TGG | + | chr7_4:54571699-54571718 | Msa1163350:intron | 50.0% | |
| CGACGGTGAAAATTAGGAGG+AGG | + | chr7_4:54571733-54571752 | Msa1163350:intron | 50.0% | |
| GATGCCGAGAAGCAACTGAA+TGG | + | chr7_4:54572008-54572027 | Msa1163350:intron | 50.0% | |
| TCTCATGCATCGCAGGGTAA+AGG | + | chr7_4:54572079-54572098 | Msa1163350:intron | 50.0% | |
| CTCATGCATCGCAGGGTAAA+GGG | + | chr7_4:54572080-54572099 | Msa1163350:intron | 50.0% | |
| AGAAGACCACCACAGCGAAA+AGG | - | chr7_4:54572729-54572748 | Msa1163360:intron | 50.0% | |
| TTCACGAATGCGCCGAATCA+AGG | - | chr7_4:54572909-54572928 | Msa1163360:intron | 50.0% | |
| GGTGTGAAGCAATAGAGCAG+TGG | + | chr7_4:54572955-54572974 | Msa1163350:intron | 50.0% | |
| CATTCTTTGGACTAAGGGGG+TGG | - | chr7_4:54574136-54574155 | Msa1163360:intron | 50.0% | |
| !! | ATAATGCTGCAGGTTGGTGG+TGG | - | chr7_4:54574290-54574309 | Msa1163360:intron | 50.0% |
| TGGCGAAGCCACCTATGAAT+TGG | - | chr7_4:54570014-54570033 | None:intergenic | 50.0% | |
| TGGTGGTAGAGACTGTGGAA+TGG | - | chr7_4:54574390-54574409 | Msa1163360:intron | 50.0% | |
| !! | GGTTTTGGTGGTAGAGACTG+TGG | - | chr7_4:54574395-54574414 | Msa1163360:intron | 50.0% |
| GGAGAGTCCTCGAGTTCCTA+TGG | + | chr7_4:54566995-54567014 | Msa1163350:CDS | 55.0% | |
| AGCAGCGAACCTTTGAACGG+TGG | + | chr7_4:54567396-54567415 | Msa1163350:CDS | 55.0% | |
| AGCGAACCTTTGAACGGTGG+CGG | + | chr7_4:54567399-54567418 | Msa1163350:CDS | 55.0% | |
| !! | TGCTGGTGTTGGCAATGGCA+CGG | + | chr7_4:54567640-54567659 | Msa1163350:CDS | 55.0% |
| GAAGATGGCCAAGACAGACG+TGG | + | chr7_4:54567841-54567860 | Msa1163350:CDS | 55.0% | |
| AGCAACAGCCACGTCTGTCT+TGG | - | chr7_4:54567852-54567871 | None:intergenic | 55.0% | |
| ! | GACAGACGTGGCTGTTGCTT+CGG | + | chr7_4:54567853-54567872 | Msa1163350:CDS | 55.0% |
| TGTGGAGGCTGCTGAAGCAA+TGG | + | chr7_4:54567901-54567920 | Msa1163350:CDS | 55.0% | |
| GTGGAGGCTGCTGAAGCAAT+GGG | + | chr7_4:54567902-54567921 | Msa1163350:CDS | 55.0% | |
| CCCTGATCGTAGTCCTCTTG+AGG | + | chr7_4:54568178-54568197 | Msa1163350:intron | 55.0% | |
| GCCTCAAGAGGACTACGATC+AGG | - | chr7_4:54568182-54568201 | None:intergenic | 55.0% | |
| ACGGATTTACCAGCATGGCC+AGG | + | chr7_4:54569134-54569153 | Msa1163350:CDS | 55.0% | |
| AGATCTCTTCCTGGCCATGC+TGG | - | chr7_4:54569146-54569165 | None:intergenic | 55.0% | |
| GTCGCCAACAATGGCAGAGA+CGG | - | chr7_4:54569791-54569810 | None:intergenic | 55.0% | |
| TTTGAACGAGGCTCGACCCT+TGG | - | chr7_4:54569877-54569896 | None:intergenic | 55.0% | |
| AAGGGTCGAGCCTCGTTCAA+AGG | + | chr7_4:54569876-54569895 | Msa1163350:intron | 55.0% | |
| CGAGCCTCGTTCAAAGGACA+CGG | + | chr7_4:54569882-54569901 | Msa1163350:intron | 55.0% | |
| !! | CAAATGCTGCAGGTTGGTGG+TGG | - | chr7_4:54569939-54569958 | None:intergenic | 55.0% |
| !! | TGGTGGTAGTGGCTGTGGAA+TGG | - | chr7_4:54570034-54570053 | None:intergenic | 55.0% |
| !!! | GGTTTTGGTGGTAGTGGCTG+TGG | - | chr7_4:54570039-54570058 | None:intergenic | 55.0% |
| GCCACTACCACCAAAACCGT+CGG | + | chr7_4:54570041-54570060 | Msa1163350:CDS | 55.0% | |
| !! | TCCGACGGTTTTGGTGGTAG+TGG | - | chr7_4:54570045-54570064 | None:intergenic | 55.0% |
| GATATCGAGAGTGGAGGAGG+AGG | - | chr7_4:54572108-54572127 | Msa1163360:intron | 55.0% | |
| GGAGATATCGAGAGTGGAGG+AGG | - | chr7_4:54572111-54572130 | Msa1163360:intron | 55.0% | |
| CGGCGCATTCGTGAATTGAC+AGG | + | chr7_4:54572914-54572933 | Msa1163350:intron | 55.0% | |
| CTACGGTGCAGTCAGGAAAC+TGG | + | chr7_4:54573393-54573412 | Msa1163350:intron | 55.0% | |
| CAGGGTCGAGGTTCGTTCAA+AGG | + | chr7_4:54574227-54574246 | Msa1163350:intron | 55.0% | |
| GTCTCTACCACCAAAACCGC+TGG | + | chr7_4:54574397-54574416 | Msa1163350:intron | 55.0% | |
| ! | CGTCCTGAATCGGTTCCGAG+TGG | + | chr7_4:54566957-54566976 | Msa1163350:CDS | 60.0% |
| ! | CTGCCACTCGGAACCGATTC+AGG | - | chr7_4:54566963-54566982 | None:intergenic | 60.0% |
| GACGAGCTGCGAAGTAGCAG+AGG | - | chr7_4:54567204-54567223 | None:intergenic | 60.0% | |
| ! | GGCAATGGCACGGCTTGTTC+AGG | + | chr7_4:54567650-54567669 | Msa1163350:CDS | 60.0% |
| TGCTATAGCTGCCATCGCGG+CGG | + | chr7_4:54567784-54567803 | Msa1163350:CDS | 60.0% | |
| !! | ATTTGCTGTTGCCGCCGCGA+TGG | - | chr7_4:54567798-54567817 | None:intergenic | 60.0% |
| TGAGCGCGACCACCTTGCAT+CGG | + | chr7_4:54567928-54567947 | Msa1163350:CDS | 60.0% | |
| AGCTGACCACCGATGCAAGG+TGG | - | chr7_4:54567940-54567959 | None:intergenic | 60.0% | |
| CTGAGCTGACCACCGATGCA+AGG | - | chr7_4:54567943-54567962 | None:intergenic | 60.0% | |
| CTTACTGCTGCAGCTGCCAC+AGG | + | chr7_4:54567998-54568017 | Msa1163350:CDS | 60.0% | |
| GAGCAGACGGTCGCCAACAA+TGG | - | chr7_4:54569800-54569819 | None:intergenic | 60.0% | |
| TCAGGGCTCTCATGCATCGC+AGG | + | chr7_4:54572072-54572091 | Msa1163350:intron | 60.0% | |
| CAGGGCTCTCATGCATCGCA+GGG | + | chr7_4:54572073-54572092 | Msa1163350:intron | 60.0% | |
| GGAGCTTCTACGGTGCAGTC+AGG | + | chr7_4:54573386-54573405 | Msa1163350:intron | 60.0% | |
| AAGGGGGTGGTCGCCAAGAA+TGG | - | chr7_4:54574123-54574142 | Msa1163360:intron | 60.0% | |
| TCGAGGACTCTCCGGCAGAG+GGG | - | chr7_4:54566988-54567007 | None:intergenic | 65.0% | |
| CTCGAGGACTCTCCGGCAGA+GGG | - | chr7_4:54566989-54567008 | None:intergenic | 65.0% | |
| ACTCGAGGACTCTCCGGCAG+AGG | - | chr7_4:54566990-54567009 | None:intergenic | 65.0% | |
| !! | GGCAGAGGGGTGCTGCCACT+CGG | - | chr7_4:54566975-54566994 | None:intergenic | 70.0% |
| GAGTGGCAGCACCCCTCTGC+CGG | + | chr7_4:54566974-54566993 | Msa1163350:CDS | 70.0% | |
| GCGCGACCACCTTGCATCGG+TGG | + | chr7_4:54567931-54567950 | Msa1163350:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 54566936 | 54574808 | 54566936 | ID=Msa1163350;Name=Msa1163350 |
| chr7_4 | mRNA | 54566936 | 54574808 | 54566936 | ID=Msa1163350-mRNA-1;Parent=Msa1163350;Name=Msa1163350-mRNA-1;_AED=0.19;_eAED=0.24;_QI=0|0.54|0.33|1|0.63|0.5|12|0|718 |
| chr7_4 | exon | 54566936 | 54567024 | 54566936 | ID=Msa1163350-mRNA-1:exon:15854;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54567031 | 54567256 | 54567031 | ID=Msa1163350-mRNA-1:exon:15855;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54567360 | 54567482 | 54567360 | ID=Msa1163350-mRNA-1:exon:15856;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54567587 | 54568019 | 54567587 | ID=Msa1163350-mRNA-1:exon:15857;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54568506 | 54568748 | 54568506 | ID=Msa1163350-mRNA-1:exon:15858;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54568846 | 54568895 | 54568846 | ID=Msa1163350-mRNA-1:exon:15859;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54568976 | 54569033 | 54568976 | ID=Msa1163350-mRNA-1:exon:15860;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54569114 | 54569295 | 54569114 | ID=Msa1163350-mRNA-1:exon:15861;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54569718 | 54569889 | 54569718 | ID=Msa1163350-mRNA-1:exon:15862;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54569932 | 54570163 | 54569932 | ID=Msa1163350-mRNA-1:exon:15863;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54574067 | 54574236 | 54574067 | ID=Msa1163350-mRNA-1:exon:15864;Parent=Msa1163350-mRNA-1 |
| chr7_4 | exon | 54574630 | 54574808 | 54574630 | ID=Msa1163350-mRNA-1:exon:15865;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54566936 | 54567024 | 54566936 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54567031 | 54567256 | 54567031 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54567360 | 54567482 | 54567360 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54567587 | 54568019 | 54567587 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54568506 | 54568748 | 54568506 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54568846 | 54568895 | 54568846 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54568976 | 54569033 | 54568976 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54569114 | 54569295 | 54569114 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54569718 | 54569889 | 54569718 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54569932 | 54570163 | 54569932 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54574067 | 54574236 | 54574067 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| chr7_4 | CDS | 54574630 | 54574808 | 54574630 | ID=Msa1163350-mRNA-1:cds;Parent=Msa1163350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
