Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220170 | KEH32452.1 | 98.182 | 385 | 6 | 1 | 1 | 385 | 1 | 384 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220170 | sp|Q6AWY6|GRF3_ORYSJ | 39.247 | 372 | 177 | 14 | 9 | 370 | 53 | 385 | 8.30e-56 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220170 | A0A072US13 | 98.182 | 385 | 6 | 1 | 1 | 385 | 1 | 384 | 0.0 | 786 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1220170 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa1220170 | 0.818419 | 1.979860e-52 | -8.615850e-47 |
| Msa0015570 | Msa1220170 | 0.811133 | 8.153781e-51 | -8.615850e-47 |
| Msa0016040 | Msa1220170 | 0.822162 | 2.744993e-53 | -8.615850e-47 |
| Msa0016530 | Msa1220170 | 0.816272 | 6.024122e-52 | -8.615850e-47 |
| Msa0018920 | Msa1220170 | 0.817474 | 3.237306e-52 | -8.615850e-47 |
| Msa0020540 | Msa1220170 | 0.828567 | 8.366266e-55 | -8.615850e-47 |
| Msa0032980 | Msa1220170 | 0.821093 | 4.849815e-53 | -8.615850e-47 |
| Msa0053070 | Msa1220170 | 0.830249 | 3.265794e-55 | -8.615850e-47 |
| Msa0062340 | Msa1220170 | 0.813906 | 2.019527e-51 | -8.615850e-47 |
| Msa0067060 | Msa1220170 | 0.845504 | 3.896713e-59 | -8.615850e-47 |
| Msa0068150 | Msa1220170 | 0.805234 | 1.472888e-49 | -8.615850e-47 |
| Msa0075530 | Msa1220170 | 0.803599 | 3.227886e-49 | -8.615850e-47 |
| Msa0091350 | Msa1220170 | 0.824326 | 8.577631e-54 | -8.615850e-47 |
| Msa0091360 | Msa1220170 | 0.815852 | 7.476860e-52 | -8.615850e-47 |
| Msa0093860 | Msa1220170 | 0.808679 | 2.750867e-50 | -8.615850e-47 |
| Msa0098410 | Msa1220170 | 0.838932 | 2.143990e-57 | -8.615850e-47 |
| Msa0106630 | Msa1220170 | 0.824325 | 8.580951e-54 | -8.615850e-47 |
| Msa0112670 | Msa1220170 | 0.840058 | 1.092699e-57 | -8.615850e-47 |
| Msa0603410 | Msa1220170 | 0.801156 | 1.028309e-48 | -8.615850e-47 |
| Msa0606100 | Msa1220170 | 0.859943 | 2.915317e-63 | -8.615850e-47 |
| Msa0608350 | Msa1220170 | 0.827021 | 1.969108e-54 | -8.615850e-47 |
| Msa0613630 | Msa1220170 | 0.839111 | 1.926166e-57 | -8.615850e-47 |
| Msa0615630 | Msa1220170 | 0.827481 | 1.527426e-54 | -8.615850e-47 |
| Msa0620500 | Msa1220170 | 0.839328 | 1.692719e-57 | -8.615850e-47 |
| Msa0621710 | Msa1220170 | 0.826669 | 2.389532e-54 | -8.615850e-47 |
| Msa0622920 | Msa1220170 | 0.844118 | 9.211870e-59 | -8.615850e-47 |
| Msa0625620 | Msa1220170 | 0.803419 | 3.517527e-49 | -8.615850e-47 |
| Msa0647050 | Msa1220170 | 0.843631 | 1.244351e-58 | -8.615850e-47 |
| Msa0647440 | Msa1220170 | 0.812896 | 3.366660e-51 | -8.615850e-47 |
| Msa0648760 | Msa1220170 | 0.812635 | 3.839479e-51 | -8.615850e-47 |
| Msa0654740 | Msa1220170 | 0.832117 | 1.135119e-55 | -8.615850e-47 |
| Msa0657210 | Msa1220170 | 0.816272 | 6.024114e-52 | -8.615850e-47 |
| Msa0666700 | Msa1220170 | 0.803442 | 3.480078e-49 | -8.615850e-47 |
| Msa0668900 | Msa1220170 | 0.802857 | 4.598584e-49 | -8.615850e-47 |
| Msa0689720 | Msa1220170 | 0.806125 | 9.573544e-50 | -8.615850e-47 |
| Msa0690320 | Msa1220170 | 0.813572 | 2.391416e-51 | -8.615850e-47 |
| Msa0691270 | Msa1220170 | 0.833574 | 4.931666e-56 | -8.615850e-47 |
| Msa0698730 | Msa1220170 | 0.825733 | 3.990468e-54 | -8.615850e-47 |
| Msa0700210 | Msa1220170 | 0.801516 | 8.679678e-49 | -8.615850e-47 |
| Msa0700500 | Msa1220170 | 0.812954 | 3.268728e-51 | -8.615850e-47 |
| Msa0701250 | Msa1220170 | 0.818747 | 1.668205e-52 | -8.615850e-47 |
| Msa0713920 | Msa1220170 | 0.828715 | 7.704545e-55 | -8.615850e-47 |
| Msa0714520 | Msa1220170 | 0.813396 | 2.615159e-51 | -8.615850e-47 |
| Msa0717900 | Msa1220170 | 0.825594 | 4.305617e-54 | -8.615850e-47 |
| Msa0718040 | Msa1220170 | 0.803466 | 3.439497e-49 | -8.615850e-47 |
| Msa0722220 | Msa1220170 | 0.822886 | 1.863758e-53 | -8.615850e-47 |
| Msa0728780 | Msa1220170 | 0.814575 | 1.436828e-51 | -8.615850e-47 |
| Msa0743440 | Msa1220170 | 0.806282 | 8.870979e-50 | -8.615850e-47 |
| Msa0747740 | Msa1220170 | 0.845689 | 3.471392e-59 | -8.615850e-47 |
| Msa0769730 | Msa1220170 | 0.808744 | 2.664538e-50 | -8.615850e-47 |
| Msa0773630 | Msa1220170 | 0.803222 | 3.863850e-49 | -8.615850e-47 |
| Msa0800660 | Msa1220170 | 0.829980 | 3.798785e-55 | -8.615850e-47 |
| Msa0805680 | Msa1220170 | 0.827575 | 1.450224e-54 | -8.615850e-47 |
| Msa0811020 | Msa1220170 | 0.820584 | 6.350051e-53 | -8.615850e-47 |
| Msa0816080 | Msa1220170 | 0.812922 | 3.321653e-51 | -8.615850e-47 |
| Msa0818150 | Msa1220170 | 0.820702 | 5.966521e-53 | -8.615850e-47 |
| Msa0821160 | Msa1220170 | 0.813041 | 3.128324e-51 | -8.615850e-47 |
| Msa0835350 | Msa1220170 | 0.814076 | 1.852144e-51 | -8.615850e-47 |
| Msa0121330 | Msa1220170 | 0.812758 | 3.608095e-51 | -8.615850e-47 |
| Msa0123320 | Msa1220170 | 0.815225 | 1.031072e-51 | -8.615850e-47 |
| Msa0127340 | Msa1220170 | 0.800745 | 1.247669e-48 | -8.615850e-47 |
| Msa0127680 | Msa1220170 | 0.816412 | 5.604080e-52 | -8.615850e-47 |
| Msa0140380 | Msa1220170 | 0.814863 | 1.240452e-51 | -8.615850e-47 |
| Msa0141640 | Msa1220170 | 0.815356 | 9.639603e-52 | -8.615850e-47 |
| Msa0153210 | Msa1220170 | 0.835026 | 2.132084e-56 | -8.615850e-47 |
| Msa0156050 | Msa1220170 | 0.801945 | 7.086047e-49 | -8.615850e-47 |
| Msa0156090 | Msa1220170 | 0.806239 | 9.057815e-50 | -8.615850e-47 |
| Msa0159590 | Msa1220170 | 0.843558 | 1.301840e-58 | -8.615850e-47 |
| Msa0159620 | Msa1220170 | 0.830551 | 2.755957e-55 | -8.615850e-47 |
| Msa0160160 | Msa1220170 | 0.813890 | 2.035615e-51 | -8.615850e-47 |
| Msa0160170 | Msa1220170 | 0.816629 | 5.011661e-52 | -8.615850e-47 |
| Msa0165830 | Msa1220170 | 0.824866 | 6.400047e-54 | -8.615850e-47 |
| Msa0166170 | Msa1220170 | 0.828793 | 7.377970e-55 | -8.615850e-47 |
| Msa0168050 | Msa1220170 | 0.802550 | 5.319233e-49 | -8.615850e-47 |
| Msa0200050 | Msa1220170 | 0.802964 | 4.368694e-49 | -8.615850e-47 |
| Msa0209980 | Msa1220170 | 0.832904 | 7.241828e-56 | -8.615850e-47 |
| Msa0232760 | Msa1220170 | 0.817526 | 3.150526e-52 | -8.615850e-47 |
| Msa0367520 | Msa1220170 | 0.801361 | 9.336707e-49 | -8.615850e-47 |
| Msa0368860 | Msa1220170 | 0.812063 | 5.118721e-51 | -8.615850e-47 |
| Msa0373170 | Msa1220170 | 0.843497 | 1.351351e-58 | -8.615850e-47 |
| Msa0373500 | Msa1220170 | 0.805691 | 1.181111e-49 | -8.615850e-47 |
| Msa0383000 | Msa1220170 | 0.811093 | 8.315903e-51 | -8.615850e-47 |
| Msa0389950 | Msa1220170 | 0.805821 | 1.109445e-49 | -8.615850e-47 |
| Msa0412130 | Msa1220170 | 0.814701 | 1.347086e-51 | -8.615850e-47 |
| Msa0415140 | Msa1220170 | 0.817200 | 3.731356e-52 | -8.615850e-47 |
| Msa0420670 | Msa1220170 | 0.805367 | 1.381715e-49 | -8.615850e-47 |
| Msa0421150 | Msa1220170 | 0.817850 | 2.662223e-52 | -8.615850e-47 |
| Msa0421750 | Msa1220170 | 0.837575 | 4.794670e-57 | -8.615850e-47 |
| Msa0430480 | Msa1220170 | 0.812051 | 5.148542e-51 | -8.615850e-47 |
| Msa0433150 | Msa1220170 | 0.804909 | 1.722345e-49 | -8.615850e-47 |
| Msa0433760 | Msa1220170 | 0.821652 | 3.603794e-53 | -8.615850e-47 |
| Msa0447750 | Msa1220170 | 0.807249 | 5.542554e-50 | -8.615850e-47 |
| Msa0462780 | Msa1220170 | 0.802838 | 4.639528e-49 | -8.615850e-47 |
| Msa0467690 | Msa1220170 | 0.841280 | 5.230764e-58 | -8.615850e-47 |
| Msa0477630 | Msa1220170 | 0.818736 | 1.677341e-52 | -8.615850e-47 |
| Msa0480730 | Msa1220170 | 0.825546 | 4.418537e-54 | -8.615850e-47 |
| Msa0989370 | Msa1220170 | 0.825114 | 5.592536e-54 | -8.615850e-47 |
| Msa1000970 | Msa1220170 | 0.805171 | 1.518432e-49 | -8.615850e-47 |
| Msa1008670 | Msa1220170 | 0.824351 | 8.462597e-54 | -8.615850e-47 |
| Msa1008680 | Msa1220170 | 0.826390 | 2.785220e-54 | -8.615850e-47 |
| Msa1033920 | Msa1220170 | 0.808610 | 2.846120e-50 | -8.615850e-47 |
| Msa1035570 | Msa1220170 | 0.800797 | 1.217639e-48 | -8.615850e-47 |
| Msa1035610 | Msa1220170 | 0.804008 | 2.654205e-49 | -8.615850e-47 |
| Msa1036090 | Msa1220170 | 0.821952 | 3.070337e-53 | -8.615850e-47 |
| Msa1060900 | Msa1220170 | 0.815666 | 8.223538e-52 | -8.615850e-47 |
| Msa1076020 | Msa1220170 | 0.827129 | 1.855170e-54 | -8.615850e-47 |
| Msa1078880 | Msa1220170 | 0.852539 | 4.321452e-61 | -8.615850e-47 |
| Msa1078970 | Msa1220170 | 0.845726 | 3.393128e-59 | -8.615850e-47 |
| Msa1082380 | Msa1220170 | 0.861838 | 7.741459e-64 | -8.615850e-47 |
| Msa1104220 | Msa1220170 | 0.802436 | 5.614265e-49 | -8.615850e-47 |
| Msa1114630 | Msa1220170 | 0.822799 | 1.952115e-53 | -8.615850e-47 |
| Msa1116190 | Msa1220170 | 0.810070 | 1.383465e-50 | -8.615850e-47 |
| Msa1116660 | Msa1220170 | 0.826407 | 2.758632e-54 | -8.615850e-47 |
| Msa1116740 | Msa1220170 | 0.822764 | 1.989760e-53 | -8.615850e-47 |
| Msa1122560 | Msa1220170 | 0.812569 | 3.968115e-51 | -8.615850e-47 |
| Msa1127280 | Msa1220170 | 0.852418 | 4.676080e-61 | -8.615850e-47 |
| Msa1130420 | Msa1220170 | 0.807779 | 4.277663e-50 | -8.615850e-47 |
| Msa1139050 | Msa1220170 | 0.849923 | 2.367189e-60 | -8.615850e-47 |
| Msa1148630 | Msa1220170 | 0.817101 | 3.926737e-52 | -8.615850e-47 |
| Msa1149450 | Msa1220170 | 0.836068 | 1.161867e-56 | -8.615850e-47 |
| Msa1159590 | Msa1220170 | 0.838614 | 2.590291e-57 | -8.615850e-47 |
| Msa1162880 | Msa1220170 | 0.837762 | 4.293000e-57 | -8.615850e-47 |
| Msa1163180 | Msa1220170 | 0.818785 | 1.634923e-52 | -8.615850e-47 |
| Msa1163350 | Msa1220170 | 0.803596 | 3.233343e-49 | -8.615850e-47 |
| Msa1165480 | Msa1220170 | 0.855935 | 4.515705e-62 | -8.615850e-47 |
| Msa1169190 | Msa1220170 | 0.847629 | 1.024781e-59 | -8.615850e-47 |
| Msa1183740 | Msa1220170 | 0.819145 | 1.354307e-52 | -8.615850e-47 |
| Msa1190390 | Msa1220170 | 0.833310 | 5.740068e-56 | -8.615850e-47 |
| Msa1213830 | Msa1220170 | 0.823568 | 1.291277e-53 | -8.615850e-47 |
| Msa1214350 | Msa1220170 | 0.834331 | 3.188567e-56 | -8.615850e-47 |
| Msa1215980 | Msa1220170 | 0.840128 | 1.047951e-57 | -8.615850e-47 |
| Msa1218820 | Msa1220170 | 0.806858 | 6.706128e-50 | -8.615850e-47 |
| Msa1219770 | Msa1220170 | 0.806872 | 6.660612e-50 | -8.615850e-47 |
| Msa1220030 | Msa1220170 | 0.913690 | 4.591854e-84 | -8.615850e-47 |
| Msa1220170 | Msa1223390 | 0.822987 | 1.765091e-53 | -8.615850e-47 |
| Msa1220170 | Msa1244240 | 0.807452 | 5.020503e-50 | -8.615850e-47 |
| Msa1220170 | Msa1252790 | 0.817953 | 2.524159e-52 | -8.615850e-47 |
| Msa1220170 | Msa1254420 | 0.829898 | 3.977386e-55 | -8.615850e-47 |
| Msa1220170 | Msa1254540 | 0.842819 | 2.048988e-58 | -8.615850e-47 |
| Msa1220170 | Msa1261050 | 0.867401 | 1.406293e-65 | -8.615850e-47 |
| Msa1220170 | Msa1263740 | 0.815565 | 8.663151e-52 | -8.615850e-47 |
| Msa1220170 | Msa1263780 | 0.818401 | 1.998848e-52 | -8.615850e-47 |
| Msa1220170 | Msa1266300 | 0.852433 | 4.630696e-61 | -8.615850e-47 |
| Msa1220170 | Msa1266690 | 0.810244 | 1.269595e-50 | -8.615850e-47 |
| Msa1220170 | Msa1267930 | 0.816875 | 4.412577e-52 | -8.615850e-47 |
| Msa1220170 | Msa1268540 | 0.817952 | 2.525346e-52 | -8.615850e-47 |
| Msa1220170 | Msa1279120 | 0.821715 | 3.484755e-53 | -8.615850e-47 |
| Msa1220170 | Msa1294460 | 0.829523 | 4.909794e-55 | -8.615850e-47 |
| Msa1220170 | Msa1294790 | 0.817506 | 3.182788e-52 | -8.615850e-47 |
| Msa1220170 | Msa1300460 | 0.867047 | 1.824091e-65 | -8.615850e-47 |
| Msa1220170 | Msa1301820 | 0.813586 | 2.374849e-51 | -8.615850e-47 |
| Msa1220170 | Msa1305780 | 0.821612 | 3.679775e-53 | -8.615850e-47 |
| Msa1220170 | Msa1305920 | 0.804054 | 2.597388e-49 | -8.615850e-47 |
| Msa1220170 | Msa1306790 | 0.803684 | 3.098995e-49 | -8.615850e-47 |
| Msa1220170 | Msa1332950 | 0.830970 | 2.174843e-55 | -8.615850e-47 |
| Msa1220170 | Msa1333360 | 0.800483 | 1.410885e-48 | -8.615850e-47 |
| Msa1220170 | Msa1339170 | 0.835809 | 1.351917e-56 | -8.615850e-47 |
| Msa1220170 | Msa1361930 | 0.851944 | 6.380701e-61 | -8.615850e-47 |
| Msa1220170 | Msa1364410 | 0.825304 | 5.042519e-54 | -8.615850e-47 |
| Msa1220170 | Msa1381470 | 0.808712 | 2.706204e-50 | -8.615850e-47 |
| Msa1220170 | Msa1393560 | 0.820647 | 6.143033e-53 | -8.615850e-47 |
| Msa1220170 | Msa1400010 | 0.807445 | 5.038169e-50 | -8.615850e-47 |
| Msa1220170 | Msa1426110 | 0.814618 | 1.405605e-51 | -8.615850e-47 |
| Msa1220170 | Msa1434380 | 0.886212 | 4.164035e-72 | -8.615850e-47 |
| Msa1220170 | Msa1434640 | 0.817795 | 2.739015e-52 | -8.615850e-47 |
| Msa1220170 | Msa1442260 | 0.821049 | 4.963123e-53 | -8.615850e-47 |
| Msa1220170 | Msa1446100 | 0.818363 | 2.038038e-52 | -8.615850e-47 |
| Msa1220170 | Msa1447170 | 0.824294 | 8.727125e-54 | -8.615850e-47 |
| Msa1220170 | Msa1450190 | 0.809184 | 2.144699e-50 | -8.615850e-47 |
| Msa1220170 | Msa1457840 | 0.814550 | 1.454868e-51 | -8.615850e-47 |
| Msa0503990 | Msa1220170 | 0.813856 | 2.070699e-51 | -8.615850e-47 |
| Msa0504720 | Msa1220170 | 0.817310 | 3.524037e-52 | -8.615850e-47 |
| Msa0507820 | Msa1220170 | 0.804117 | 2.519192e-49 | -8.615850e-47 |
| Msa0507920 | Msa1220170 | 0.810464 | 1.137842e-50 | -8.615850e-47 |
| Msa0512530 | Msa1220170 | 0.802806 | 4.710733e-49 | -8.615850e-47 |
| Msa0513080 | Msa1220170 | 0.806972 | 6.344127e-50 | -8.615850e-47 |
| Msa0513560 | Msa1220170 | 0.826698 | 2.352479e-54 | -8.615850e-47 |
| Msa0514020 | Msa1220170 | 0.832051 | 1.178657e-55 | -8.615850e-47 |
| Msa0514500 | Msa1220170 | 0.801175 | 1.019000e-48 | -8.615850e-47 |
| Msa0520870 | Msa1220170 | 0.826110 | 3.247837e-54 | -8.615850e-47 |
| Msa0521680 | Msa1220170 | 0.819814 | 9.529196e-53 | -8.615850e-47 |
| Msa0522760 | Msa1220170 | 0.805766 | 1.139062e-49 | -8.615850e-47 |
| Msa0527850 | Msa1220170 | 0.803734 | 3.026377e-49 | -8.615850e-47 |
| Msa0531960 | Msa1220170 | 0.814143 | 1.789796e-51 | -8.615850e-47 |
| Msa0541740 | Msa1220170 | 0.815306 | 9.889373e-52 | -8.615850e-47 |
| Msa0550590 | Msa1220170 | 0.832286 | 1.031032e-55 | -8.615850e-47 |
| Msa0554300 | Msa1220170 | 0.809900 | 1.505778e-50 | -8.615850e-47 |
| Msa0559100 | Msa1220170 | 0.809897 | 1.507464e-50 | -8.615850e-47 |
| Msa0561560 | Msa1220170 | 0.846141 | 2.616400e-59 | -8.615850e-47 |
| Msa0563740 | Msa1220170 | 0.857710 | 1.356159e-62 | -8.615850e-47 |
| Msa0563900 | Msa1220170 | 0.813471 | 2.517228e-51 | -8.615850e-47 |
| Msa0563980 | Msa1220170 | 0.815905 | 7.273806e-52 | -8.615850e-47 |
| Msa0564980 | Msa1220170 | 0.811233 | 7.757034e-51 | -8.615850e-47 |
| Msa0572830 | Msa1220170 | 0.804672 | 1.930088e-49 | -8.615850e-47 |
| Msa0577280 | Msa1220170 | 0.847432 | 1.161084e-59 | -8.615850e-47 |
| Msa0577330 | Msa1220170 | 0.849284 | 3.570153e-60 | -8.615850e-47 |
| Msa0582460 | Msa1220170 | 0.800613 | 1.327290e-48 | -8.615850e-47 |
| Msa0586200 | Msa1220170 | 0.808782 | 2.615239e-50 | -8.615850e-47 |
| Msa0593400 | Msa1220170 | 0.806542 | 7.820625e-50 | -8.615850e-47 |
| Msa0863620 | Msa1220170 | 0.820326 | 7.276344e-53 | -8.615850e-47 |
| Msa0866530 | Msa1220170 | 0.801141 | 1.035527e-48 | -8.615850e-47 |
| Msa0879920 | Msa1220170 | 0.808971 | 2.382367e-50 | -8.615850e-47 |
| Msa0888790 | Msa1220170 | 0.816852 | 4.466804e-52 | -8.615850e-47 |
| Msa0909760 | Msa1220170 | 0.814738 | 1.322109e-51 | -8.615850e-47 |
| Msa0924430 | Msa1220170 | 0.818589 | 1.811424e-52 | -8.615850e-47 |
| Msa0931590 | Msa1220170 | 0.831394 | 1.711827e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220170 | MtrunA17_Chr4g0070591 | 98.910 | 367 | 3 | 1 | 1 | 367 | 1 | 366 | 0.0 | 748 |
| Msa1220170 | MtrunA17_Chr2g0300511 | 61.804 | 377 | 101 | 12 | 5 | 365 | 3 | 352 | 2.19e-137 | 396 |
| Msa1220170 | MtrunA17_Chr8g0343881 | 42.582 | 364 | 157 | 15 | 1 | 338 | 1 | 338 | 2.01e-68 | 219 |
| Msa1220170 | MtrunA17_Chr4g0021261 | 39.266 | 354 | 147 | 14 | 9 | 352 | 25 | 320 | 4.26e-55 | 184 |
| Msa1220170 | MtrunA17_Chr5g0409471 | 60.550 | 109 | 31 | 2 | 9 | 117 | 16 | 112 | 2.81e-39 | 142 |
| Msa1220170 | MtrunA17_Chr1g0152191 | 56.897 | 116 | 44 | 2 | 7 | 117 | 142 | 256 | 3.94e-39 | 148 |
| Msa1220170 | MtrunA17_Chr7g0265931 | 52.206 | 136 | 44 | 4 | 6 | 127 | 68 | 196 | 1.05e-36 | 137 |
| Msa1220170 | MtrunA17_Chr3g0127641 | 48.739 | 119 | 42 | 4 | 9 | 127 | 112 | 211 | 4.70e-27 | 112 |
| Msa1220170 | MtrunA17_Chr8g0351521 | 45.536 | 112 | 47 | 3 | 6 | 117 | 51 | 148 | 6.77e-21 | 94.0 |
| Msa1220170 | MtrunA17_Chr8g0351521 | 43.750 | 80 | 34 | 2 | 73 | 152 | 302 | 370 | 4.92e-13 | 70.1 |
| Msa1220170 | MtrunA17_Chr8g0351291 | 64.103 | 39 | 14 | 0 | 73 | 111 | 51 | 89 | 1.43e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220170 | AT3G13960.1 | 71.053 | 114 | 27 | 3 | 7 | 117 | 14 | 124 | 1.08e-51 | 178 |
| Msa1220170 | AT2G06200.2 | 66.667 | 120 | 29 | 2 | 7 | 115 | 43 | 162 | 7.86e-48 | 164 |
| Msa1220170 | AT2G06200.1 | 66.667 | 120 | 29 | 2 | 7 | 115 | 4 | 123 | 1.17e-47 | 162 |
| Msa1220170 | AT4G37740.1 | 54.264 | 129 | 54 | 3 | 7 | 134 | 162 | 286 | 7.95e-41 | 151 |
| Msa1220170 | AT2G36400.1 | 57.377 | 122 | 43 | 3 | 10 | 125 | 77 | 195 | 2.01e-36 | 137 |
| Msa1220170 | AT2G22840.1 | 57.143 | 112 | 44 | 2 | 7 | 117 | 131 | 239 | 3.59e-34 | 133 |
| Msa1220170 | AT3G52910.1 | 53.390 | 118 | 39 | 3 | 10 | 117 | 83 | 194 | 8.72e-33 | 127 |
| Msa1220170 | AT5G53660.1 | 50.000 | 110 | 38 | 2 | 8 | 117 | 58 | 150 | 1.04e-26 | 110 |
| Msa1220170 | AT2G06200.3 | 92.157 | 51 | 2 | 1 | 67 | 115 | 1 | 51 | 8.89e-26 | 102 |
| Msa1220170 | AT4G24150.3 | 42.149 | 121 | 64 | 2 | 2 | 117 | 104 | 223 | 1.27e-22 | 99.4 |
| Msa1220170 | AT4G24150.2 | 42.149 | 121 | 64 | 2 | 2 | 117 | 142 | 261 | 1.99e-22 | 99.0 |
| Msa1220170 | AT4G24150.1 | 36.986 | 146 | 61 | 3 | 2 | 117 | 142 | 286 | 1.70e-20 | 93.6 |
| Msa1220170 | AT2G45480.2 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 3.29e-18 | 85.1 |
| Msa1220170 | AT2G45480.1 | 41.441 | 111 | 64 | 1 | 5 | 114 | 17 | 127 | 1.36e-17 | 84.3 |
| Msa1220170 | AT2G45480.1 | 41.935 | 93 | 42 | 3 | 70 | 155 | 301 | 388 | 1.24e-12 | 69.3 |
| Msa1220170 | AT2G45480.3 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 1.45e-17 | 84.3 |
| Msa1220170 | AT2G45480.3 | 41.935 | 93 | 42 | 3 | 70 | 155 | 303 | 390 | 1.30e-12 | 69.3 |
Find 82 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGAGTTTCTGCTGCTTT+TGG | 0.148849 | 8_1:-83182257 | None:intergenic |
| TGAAGGAACAGGTATGTTTA+TGG | 0.231611 | 8_1:+83181920 | Msa1220170:intron |
| TGCCACTGAGTTGGAGTAAA+AGG | 0.276188 | 8_1:-83180847 | None:intergenic |
| CTTCTGCACCTCCCTGGCTC+TGG | 0.278943 | 8_1:-83181132 | None:intergenic |
| CCACAAACCAACGAGGTAAA+TGG | 0.279949 | 8_1:+83182362 | Msa1220170:CDS |
| CCCTTGTTTCTTGACAATAC+TGG | 0.290985 | 8_1:+83181501 | Msa1220170:CDS |
| CAGAAACTCATGGCTTGATT+TGG | 0.299180 | 8_1:+83182267 | Msa1220170:CDS |
| GCTTTCTTCACTGAACCTTC+TGG | 0.302685 | 8_1:+83181968 | Msa1220170:CDS |
| CTTTCACAGTACTTTGAATC+TGG | 0.319625 | 8_1:-83181195 | None:intergenic |
| CTTCTTCAATGGATGATTCA+TGG | 0.368355 | 8_1:+83182011 | Msa1220170:CDS |
| TTCTGCACCTCCCTGGCTCT+GGG | 0.368474 | 8_1:-83181131 | None:intergenic |
| ATCTACAAATACATGGCTTC+TGG | 0.368517 | 8_1:+83180892 | Msa1220170:CDS |
| TTGTCTTGAAATGAGAAGTT+AGG | 0.391585 | 8_1:-83181471 | None:intergenic |
| AGAGGAAAGGGTGGTTAAGA+TGG | 0.391821 | 8_1:-83181425 | None:intergenic |
| GAACTATTTACCAATGGGAT+TGG | 0.400450 | 8_1:+83181095 | Msa1220170:CDS |
| TTTAAACAGAGAAATTGTTC+TGG | 0.401538 | 8_1:+83182070 | Msa1220170:CDS |
| TTCATCGTTTCTTTGATGAA+TGG | 0.411092 | 8_1:+83182230 | Msa1220170:CDS |
| AACTATTTACCAATGGGATT+GGG | 0.420553 | 8_1:+83181096 | Msa1220170:CDS |
| CCATTTACCTCGTTGGTTTG+TGG | 0.423824 | 8_1:-83182362 | None:intergenic |
| AAGAAGAGTGTTGAGGGTAA+TGG | 0.427004 | 8_1:-83181392 | None:intergenic |
| GCCTTGAGGATGGAGGGTTA+TGG | 0.442680 | 8_1:-83181449 | None:intergenic |
| AAGTTTATCAGCTTCTTCAA+TGG | 0.445043 | 8_1:+83182000 | Msa1220170:CDS |
| GAGGGTTATGGTAGAGGAAA+GGG | 0.446918 | 8_1:-83181437 | None:intergenic |
| TTGATAGTGAGTAGAAGATC+AGG | 0.446923 | 8_1:-83180928 | None:intergenic |
| AAGCATAAGAAGAGTGTTGA+GGG | 0.452542 | 8_1:-83181398 | None:intergenic |
| TCTGTTCTTCTGCACCTCCC+TGG | 0.454328 | 8_1:-83181138 | None:intergenic |
| ACAATTTCTCTGTTTAAAAG+AGG | 0.457057 | 8_1:-83182065 | None:intergenic |
| GAGGAAAGGGTGGTTAAGAT+GGG | 0.457253 | 8_1:-83181424 | None:intergenic |
| GAGTAGAAGATCAGGAGGAA+TGG | 0.465599 | 8_1:-83180920 | None:intergenic |
| GTAAGAGTACTCATTGTCAT+TGG | 0.465700 | 8_1:-83182098 | None:intergenic |
| CTTCCACAGGCTTTCTTGAA+CGG | 0.472599 | 8_1:-83181239 | None:intergenic |
| GGATGGAACTATTTACCAAT+GGG | 0.479254 | 8_1:+83181090 | Msa1220170:CDS |
| CAATGATGAATGGAAGAAAC+AGG | 0.479723 | 8_1:+83180821 | Msa1220170:exon |
| GAAGAACAGATGGAAAGAAA+TGG | 0.480263 | 8_1:+83181151 | Msa1220170:CDS |
| ATAACAACAACACTGATTGC+AGG | 0.480287 | 8_1:+83181538 | Msa1220170:CDS |
| GAAGAGGAGCTTATAGTAAG+TGG | 0.487573 | 8_1:-83182043 | None:intergenic |
| GATCAAGGTTGTTACATCTC+AGG | 0.490399 | 8_1:+83182157 | Msa1220170:CDS |
| TCTCTGTTTAAAAGAGGAAG+AGG | 0.498513 | 8_1:-83182059 | None:intergenic |
| TAACAAACAACAATGATGAA+TGG | 0.501615 | 8_1:+83180811 | Msa1220170:exon |
| AGGATGGAGGGTTATGGTAG+AGG | 0.503413 | 8_1:-83181443 | None:intergenic |
| TCAAGCTCTTGCCACTGAGT+TGG | 0.513392 | 8_1:-83180856 | None:intergenic |
| TTATGGACTGAAAGAGGAGG+TGG | 0.522907 | 8_1:+83181937 | Msa1220170:CDS |
| AAGATTGTTGAAGTAGCAGC+AGG | 0.534940 | 8_1:-83181291 | None:intergenic |
| ATCATGAGAAGATGTAGGAA+TGG | 0.536076 | 8_1:-83182323 | None:intergenic |
| ACCAGTATTGTCAAGAAACA+AGG | 0.541001 | 8_1:-83181502 | None:intergenic |
| AAACAACCACAGCAAGATCA+AGG | 0.541674 | 8_1:+83182142 | Msa1220170:CDS |
| AGAGAAACCATTTACCTCGT+TGG | 0.542197 | 8_1:-83182369 | None:intergenic |
| GTGAAATCATGAGAAGATGT+AGG | 0.543173 | 8_1:-83182328 | None:intergenic |
| GTGAAAGGCACATGCATAGA+GGG | 0.547205 | 8_1:+83181211 | Msa1220170:CDS |
| AAGAGAAGAGAAGAGAAGAG+AGG | 0.547431 | 8_1:-83180776 | None:intergenic |
| GAAGCATAAGAAGAGTGTTG+AGG | 0.548399 | 8_1:-83181399 | None:intergenic |
| ATGTGGTGCATGCAGTTGGA+TGG | 0.552338 | 8_1:+83181073 | Msa1220170:intron |
| GGAGGGTTATGGTAGAGGAA+AGG | 0.556801 | 8_1:-83181438 | None:intergenic |
| GAACAGATGGAAAGAAATGG+AGG | 0.559737 | 8_1:+83181154 | Msa1220170:CDS |
| TGGATGGAACTATTTACCAA+TGG | 0.564553 | 8_1:+83181089 | Msa1220170:CDS |
| CGACACTGACACATCGCCAT+AGG | 0.567506 | 8_1:+83182432 | Msa1220170:CDS |
| GAAGAAACATTCATGAAACA+TGG | 0.569282 | 8_1:+83182184 | Msa1220170:CDS |
| ATAGTGAGTAGAAGATCAGG+AGG | 0.571348 | 8_1:-83180925 | None:intergenic |
| CAGATTCAAAGTACTGTGAA+AGG | 0.571794 | 8_1:+83181196 | Msa1220170:CDS |
| GGGAGGTGCAGAAGAACAGA+TGG | 0.577454 | 8_1:+83181141 | Msa1220170:CDS |
| AAACTTCTTATAGTTCCAGA+AGG | 0.579842 | 8_1:-83181983 | None:intergenic |
| AAGTTAGGCCTTGAGGATGG+AGG | 0.587194 | 8_1:-83181456 | None:intergenic |
| ACCATAACCCTCCATCCTCA+AGG | 0.592083 | 8_1:+83181448 | Msa1220170:CDS |
| AAATGAGAAGTTAGGCCTTG+AGG | 0.594153 | 8_1:-83181463 | None:intergenic |
| AGTTAGGCCTTGAGGATGGA+GGG | 0.597805 | 8_1:-83181455 | None:intergenic |
| GTATGTTTATGGACTGAAAG+AGG | 0.601366 | 8_1:+83181931 | Msa1220170:CDS |
| AAGAAACATTCATGAAACAT+GGG | 0.603745 | 8_1:+83182185 | Msa1220170:CDS |
| GAGAAGTTAGGCCTTGAGGA+TGG | 0.604526 | 8_1:-83181459 | None:intergenic |
| CCAAAAGCAGCAGAAACTCA+TGG | 0.605608 | 8_1:+83182257 | Msa1220170:CDS |
| AGCTCTTATCTACAAATACA+TGG | 0.606523 | 8_1:+83180885 | Msa1220170:CDS |
| AGTGTTGTTGTTATTGTGAG+AGG | 0.610925 | 8_1:-83181529 | None:intergenic |
| GGAGATTGAAAGCTGAGTGG+TGG | 0.613550 | 8_1:-83182302 | None:intergenic |
| TAACAACCTTGATCTTGCTG+TGG | 0.626299 | 8_1:-83182148 | None:intergenic |
| TGTGAAAGGCACATGCATAG+AGG | 0.626931 | 8_1:+83181210 | Msa1220170:CDS |
| AAACCGTTCAAGAAAGCCTG+TGG | 0.641388 | 8_1:+83181236 | Msa1220170:CDS |
| TGTTTATGGACTGAAAGAGG+AGG | 0.650765 | 8_1:+83181934 | Msa1220170:CDS |
| CCAGTATTGTCAAGAAACAA+GGG | 0.652005 | 8_1:-83181501 | None:intergenic |
| AAATAGACCCAGAGCCAGGG+AGG | 0.659120 | 8_1:+83181124 | Msa1220170:CDS |
| GGTTATGGTAGAGGAAAGGG+TGG | 0.659870 | 8_1:-83181434 | None:intergenic |
| TTTAGTTCCACAAACCAACG+AGG | 0.729736 | 8_1:+83182355 | Msa1220170:CDS |
| AATGGAGATTGAAAGCTGAG+TGG | 0.781428 | 8_1:-83182305 | None:intergenic |
| TTACAGTGTTGAGACTGATG+AGG | 0.793602 | 8_1:-83180982 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAGTCATTCATATA+TGG | - | chr8_1:83181020-83181039 | None:intergenic | 15.0% |
| !! | TATATATAGTCATTCATATA+TGG | - | chr8_1:83181020-83181039 | None:intergenic | 15.0% |
| !!! | TTAAGTTGTTTATTCAAACA+TGG | - | chr8_1:83181599-83181618 | None:intergenic | 20.0% |
| !!! | CTTATCGATTATAAACTTAT+AGG | - | chr8_1:83181671-83181690 | None:intergenic | 20.0% |
| !! | AGAGAACTTATAAAAATAAG+TGG | + | chr8_1:83181729-83181748 | Msa1220170:intron | 20.0% |
| !!! | TTTATGAAAGATTCTCTTTT+TGG | + | chr8_1:83181882-83181901 | Msa1220170:intron | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+TGG | - | chr8_1:83181599-83181618 | None:intergenic | 20.0% |
| !!! | CTTATCGATTATAAACTTAT+AGG | - | chr8_1:83181671-83181690 | None:intergenic | 20.0% |
| !! | AGAGAACTTATAAAAATAAG+TGG | + | chr8_1:83181729-83181748 | Msa1220170:intron | 20.0% |
| !!! | TTTATGAAAGATTCTCTTTT+TGG | + | chr8_1:83181882-83181901 | Msa1220170:intron | 20.0% |
| ! | TAACAAACAACAATGATGAA+TGG | + | chr8_1:83180811-83180830 | Msa1220170:exon | 25.0% |
| ! | CTTTAAACCAACACATATTT+AGG | + | chr8_1:83181573-83181592 | Msa1220170:intron | 25.0% |
| ! | ACAATTTCTCTGTTTAAAAG+AGG | - | chr8_1:83182068-83182087 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAATTGTTC+TGG | + | chr8_1:83182070-83182089 | Msa1220170:CDS | 25.0% |
| ! | AAGAAACATTCATGAAACAT+GGG | + | chr8_1:83182185-83182204 | Msa1220170:CDS | 25.0% |
| ! | TAACAAACAACAATGATGAA+TGG | + | chr8_1:83180811-83180830 | Msa1220170:exon | 25.0% |
| ! | CTTTAAACCAACACATATTT+AGG | + | chr8_1:83181573-83181592 | Msa1220170:intron | 25.0% |
| ! | ACAATTTCTCTGTTTAAAAG+AGG | - | chr8_1:83182068-83182087 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAATTGTTC+TGG | + | chr8_1:83182070-83182089 | Msa1220170:CDS | 25.0% |
| ! | AAGAAACATTCATGAAACAT+GGG | + | chr8_1:83182185-83182204 | Msa1220170:CDS | 25.0% |
| AGCTCTTATCTACAAATACA+TGG | + | chr8_1:83180885-83180904 | Msa1220170:CDS | 30.0% | |
| AACTATTTACCAATGGGATT+GGG | + | chr8_1:83181096-83181115 | Msa1220170:CDS | 30.0% | |
| TTGTCTTGAAATGAGAAGTT+AGG | - | chr8_1:83181474-83181493 | None:intergenic | 30.0% | |
| TCAAATAGTCCAATCCAAAA+AGG | + | chr8_1:83181821-83181840 | Msa1220170:intron | 30.0% | |
| ! | GGTATTGTTGTTATCTTTGA+AGG | + | chr8_1:83181903-83181922 | Msa1220170:intron | 30.0% |
| AAACTTCTTATAGTTCCAGA+AGG | - | chr8_1:83181986-83182005 | None:intergenic | 30.0% | |
| AAGTTTATCAGCTTCTTCAA+TGG | + | chr8_1:83182000-83182019 | Msa1220170:CDS | 30.0% | |
| GAAGAAACATTCATGAAACA+TGG | + | chr8_1:83182184-83182203 | Msa1220170:CDS | 30.0% | |
| AAACGATGAAAAATCTTCTG+AGG | - | chr8_1:83182220-83182239 | None:intergenic | 30.0% | |
| TTCATCGTTTCTTTGATGAA+TGG | + | chr8_1:83182230-83182249 | Msa1220170:CDS | 30.0% | |
| AGCTCTTATCTACAAATACA+TGG | + | chr8_1:83180885-83180904 | Msa1220170:CDS | 30.0% | |
| AACTATTTACCAATGGGATT+GGG | + | chr8_1:83181096-83181115 | Msa1220170:CDS | 30.0% | |
| TTGTCTTGAAATGAGAAGTT+AGG | - | chr8_1:83181474-83181493 | None:intergenic | 30.0% | |
| TCAAATAGTCCAATCCAAAA+AGG | + | chr8_1:83181821-83181840 | Msa1220170:intron | 30.0% | |
| ! | GGTATTGTTGTTATCTTTGA+AGG | + | chr8_1:83181903-83181922 | Msa1220170:intron | 30.0% |
| AAACTTCTTATAGTTCCAGA+AGG | - | chr8_1:83181986-83182005 | None:intergenic | 30.0% | |
| AAGTTTATCAGCTTCTTCAA+TGG | + | chr8_1:83182000-83182019 | Msa1220170:CDS | 30.0% | |
| GAAGAAACATTCATGAAACA+TGG | + | chr8_1:83182184-83182203 | Msa1220170:CDS | 30.0% | |
| AAACGATGAAAAATCTTCTG+AGG | - | chr8_1:83182220-83182239 | None:intergenic | 30.0% | |
| TTCATCGTTTCTTTGATGAA+TGG | + | chr8_1:83182230-83182249 | Msa1220170:CDS | 30.0% | |
| CAATGATGAATGGAAGAAAC+AGG | + | chr8_1:83180821-83180840 | Msa1220170:exon | 35.0% | |
| ATCTACAAATACATGGCTTC+TGG | + | chr8_1:83180892-83180911 | Msa1220170:CDS | 35.0% | |
| !! | TTGATAGTGAGTAGAAGATC+AGG | - | chr8_1:83180931-83180950 | None:intergenic | 35.0% |
| !! | ATGCACTTGTTGATTTGATG+TGG | + | chr8_1:83181056-83181075 | Msa1220170:intron | 35.0% |
| TGGATGGAACTATTTACCAA+TGG | + | chr8_1:83181089-83181108 | Msa1220170:CDS | 35.0% | |
| GGATGGAACTATTTACCAAT+GGG | + | chr8_1:83181090-83181109 | Msa1220170:CDS | 35.0% | |
| GAACTATTTACCAATGGGAT+TGG | + | chr8_1:83181095-83181114 | Msa1220170:CDS | 35.0% | |
| ! | ATTTTTCTTCCCAATCCCAT+TGG | - | chr8_1:83181108-83181127 | None:intergenic | 35.0% |
| GAAGAACAGATGGAAAGAAA+TGG | + | chr8_1:83181151-83181170 | Msa1220170:CDS | 35.0% | |
| CTTTCACAGTACTTTGAATC+TGG | - | chr8_1:83181198-83181217 | None:intergenic | 35.0% | |
| !! | CAGATTCAAAGTACTGTGAA+AGG | + | chr8_1:83181196-83181215 | Msa1220170:CDS | 35.0% |
| !! | GTTGTTTTCAAAACTTCCAC+AGG | - | chr8_1:83181255-83181274 | None:intergenic | 35.0% |
| !! | AAGCATAAGAAGAGTGTTGA+GGG | - | chr8_1:83181401-83181420 | None:intergenic | 35.0% |
| CCAGTATTGTCAAGAAACAA+GGG | - | chr8_1:83181504-83181523 | None:intergenic | 35.0% | |
| ACCAGTATTGTCAAGAAACA+AGG | - | chr8_1:83181505-83181524 | None:intergenic | 35.0% | |
| ! | AGTGTTGTTGTTATTGTGAG+AGG | - | chr8_1:83181532-83181551 | None:intergenic | 35.0% |
| ! | ATAACAACAACACTGATTGC+AGG | + | chr8_1:83181538-83181557 | Msa1220170:CDS | 35.0% |
| AACATGGCCTAAATATGTGT+TGG | - | chr8_1:83181583-83181602 | None:intergenic | 35.0% | |
| ! | CATCATGAACCTTTTTGGAT+TGG | - | chr8_1:83181833-83181852 | None:intergenic | 35.0% |
| CAATCCAAAAAGGTTCATGA+TGG | + | chr8_1:83181831-83181850 | Msa1220170:intron | 35.0% | |
| ! | GTTGTTATCTTTGAAGGAAC+AGG | + | chr8_1:83181909-83181928 | Msa1220170:intron | 35.0% |
| TGAAGGAACAGGTATGTTTA+TGG | + | chr8_1:83181920-83181939 | Msa1220170:intron | 35.0% | |
| ! | GTATGTTTATGGACTGAAAG+AGG | + | chr8_1:83181931-83181950 | Msa1220170:CDS | 35.0% |
| CTTCTTCAATGGATGATTCA+TGG | + | chr8_1:83182011-83182030 | Msa1220170:CDS | 35.0% | |
| TCTCTGTTTAAAAGAGGAAG+AGG | - | chr8_1:83182062-83182081 | None:intergenic | 35.0% | |
| !! | GTAAGAGTACTCATTGTCAT+TGG | - | chr8_1:83182101-83182120 | None:intergenic | 35.0% |
| ATCATGAGAAGATGTAGGAA+TGG | - | chr8_1:83182326-83182345 | None:intergenic | 35.0% | |
| GTGAAATCATGAGAAGATGT+AGG | - | chr8_1:83182331-83182350 | None:intergenic | 35.0% | |
| CAATGATGAATGGAAGAAAC+AGG | + | chr8_1:83180821-83180840 | Msa1220170:exon | 35.0% | |
| ATCTACAAATACATGGCTTC+TGG | + | chr8_1:83180892-83180911 | Msa1220170:CDS | 35.0% | |
| !! | TTGATAGTGAGTAGAAGATC+AGG | - | chr8_1:83180931-83180950 | None:intergenic | 35.0% |
| !! | ATGCACTTGTTGATTTGATG+TGG | + | chr8_1:83181056-83181075 | Msa1220170:intron | 35.0% |
| TGGATGGAACTATTTACCAA+TGG | + | chr8_1:83181089-83181108 | Msa1220170:CDS | 35.0% | |
| GGATGGAACTATTTACCAAT+GGG | + | chr8_1:83181090-83181109 | Msa1220170:CDS | 35.0% | |
| GAACTATTTACCAATGGGAT+TGG | + | chr8_1:83181095-83181114 | Msa1220170:CDS | 35.0% | |
| ! | ATTTTTCTTCCCAATCCCAT+TGG | - | chr8_1:83181108-83181127 | None:intergenic | 35.0% |
| GAAGAACAGATGGAAAGAAA+TGG | + | chr8_1:83181151-83181170 | Msa1220170:CDS | 35.0% | |
| CTTTCACAGTACTTTGAATC+TGG | - | chr8_1:83181198-83181217 | None:intergenic | 35.0% | |
| !! | CAGATTCAAAGTACTGTGAA+AGG | + | chr8_1:83181196-83181215 | Msa1220170:CDS | 35.0% |
| !! | GTTGTTTTCAAAACTTCCAC+AGG | - | chr8_1:83181255-83181274 | None:intergenic | 35.0% |
| !! | AAGCATAAGAAGAGTGTTGA+GGG | - | chr8_1:83181401-83181420 | None:intergenic | 35.0% |
| CCAGTATTGTCAAGAAACAA+GGG | - | chr8_1:83181504-83181523 | None:intergenic | 35.0% | |
| ACCAGTATTGTCAAGAAACA+AGG | - | chr8_1:83181505-83181524 | None:intergenic | 35.0% | |
| ! | AGTGTTGTTGTTATTGTGAG+AGG | - | chr8_1:83181532-83181551 | None:intergenic | 35.0% |
| ! | ATAACAACAACACTGATTGC+AGG | + | chr8_1:83181538-83181557 | Msa1220170:CDS | 35.0% |
| AACATGGCCTAAATATGTGT+TGG | - | chr8_1:83181583-83181602 | None:intergenic | 35.0% | |
| ! | CATCATGAACCTTTTTGGAT+TGG | - | chr8_1:83181833-83181852 | None:intergenic | 35.0% |
| CAATCCAAAAAGGTTCATGA+TGG | + | chr8_1:83181831-83181850 | Msa1220170:intron | 35.0% | |
| ! | GTTGTTATCTTTGAAGGAAC+AGG | + | chr8_1:83181909-83181928 | Msa1220170:intron | 35.0% |
| TGAAGGAACAGGTATGTTTA+TGG | + | chr8_1:83181920-83181939 | Msa1220170:intron | 35.0% | |
| ! | GTATGTTTATGGACTGAAAG+AGG | + | chr8_1:83181931-83181950 | Msa1220170:CDS | 35.0% |
| CTTCTTCAATGGATGATTCA+TGG | + | chr8_1:83182011-83182030 | Msa1220170:CDS | 35.0% | |
| TCTCTGTTTAAAAGAGGAAG+AGG | - | chr8_1:83182062-83182081 | None:intergenic | 35.0% | |
| !! | GTAAGAGTACTCATTGTCAT+TGG | - | chr8_1:83182101-83182120 | None:intergenic | 35.0% |
| ATCATGAGAAGATGTAGGAA+TGG | - | chr8_1:83182326-83182345 | None:intergenic | 35.0% | |
| GTGAAATCATGAGAAGATGT+AGG | - | chr8_1:83182331-83182350 | None:intergenic | 35.0% | |
| AAGAGAAGAGAAGAGAAGAG+AGG | - | chr8_1:83180779-83180798 | None:intergenic | 40.0% | |
| ! | ATCCTTTTACTCCAACTCAG+TGG | + | chr8_1:83180845-83180864 | Msa1220170:CDS | 40.0% |
| ATAGTGAGTAGAAGATCAGG+AGG | - | chr8_1:83180928-83180947 | None:intergenic | 40.0% | |
| ! | TTACAGTGTTGAGACTGATG+AGG | - | chr8_1:83180985-83181004 | None:intergenic | 40.0% |
| GAACAGATGGAAAGAAATGG+AGG | + | chr8_1:83181154-83181173 | Msa1220170:CDS | 40.0% | |
| AAGATTGTTGAAGTAGCAGC+AGG | - | chr8_1:83181294-83181313 | None:intergenic | 40.0% | |
| !! | AAGAAGAGTGTTGAGGGTAA+TGG | - | chr8_1:83181395-83181414 | None:intergenic | 40.0% |
| !! | GAAGCATAAGAAGAGTGTTG+AGG | - | chr8_1:83181402-83181421 | None:intergenic | 40.0% |
| AAATGAGAAGTTAGGCCTTG+AGG | - | chr8_1:83181466-83181485 | None:intergenic | 40.0% | |
| ! | CCCTTGTTTCTTGACAATAC+TGG | + | chr8_1:83181501-83181520 | Msa1220170:CDS | 40.0% |
| AAGCTATCGTTGAGACTGAA+TGG | + | chr8_1:83181701-83181720 | Msa1220170:intron | 40.0% | |
| ! | AGCACCATCATGAACCTTTT+TGG | - | chr8_1:83181838-83181857 | None:intergenic | 40.0% |
| ! | TGTTTATGGACTGAAAGAGG+AGG | + | chr8_1:83181934-83181953 | Msa1220170:CDS | 40.0% |
| GAAGAGGAGCTTATAGTAAG+TGG | - | chr8_1:83182046-83182065 | None:intergenic | 40.0% | |
| AAACAACCACAGCAAGATCA+AGG | + | chr8_1:83182142-83182161 | Msa1220170:CDS | 40.0% | |
| TAACAACCTTGATCTTGCTG+TGG | - | chr8_1:83182151-83182170 | None:intergenic | 40.0% | |
| GATCAAGGTTGTTACATCTC+AGG | + | chr8_1:83182157-83182176 | Msa1220170:CDS | 40.0% | |
| !!! | CATGAGTTTCTGCTGCTTTT+GGG | - | chr8_1:83182259-83182278 | None:intergenic | 40.0% |
| CAGAAACTCATGGCTTGATT+TGG | + | chr8_1:83182267-83182286 | Msa1220170:CDS | 40.0% | |
| AATGGAGATTGAAAGCTGAG+TGG | - | chr8_1:83182308-83182327 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCACAAACCAACG+AGG | + | chr8_1:83182355-83182374 | Msa1220170:CDS | 40.0% |
| AGAGAAACCATTTACCTCGT+TGG | - | chr8_1:83182372-83182391 | None:intergenic | 40.0% | |
| AAGAGAAGAGAAGAGAAGAG+AGG | - | chr8_1:83180779-83180798 | None:intergenic | 40.0% | |
| ! | ATCCTTTTACTCCAACTCAG+TGG | + | chr8_1:83180845-83180864 | Msa1220170:CDS | 40.0% |
| ATAGTGAGTAGAAGATCAGG+AGG | - | chr8_1:83180928-83180947 | None:intergenic | 40.0% | |
| ! | TTACAGTGTTGAGACTGATG+AGG | - | chr8_1:83180985-83181004 | None:intergenic | 40.0% |
| GAACAGATGGAAAGAAATGG+AGG | + | chr8_1:83181154-83181173 | Msa1220170:CDS | 40.0% | |
| AAGATTGTTGAAGTAGCAGC+AGG | - | chr8_1:83181294-83181313 | None:intergenic | 40.0% | |
| !! | AAGAAGAGTGTTGAGGGTAA+TGG | - | chr8_1:83181395-83181414 | None:intergenic | 40.0% |
| !! | GAAGCATAAGAAGAGTGTTG+AGG | - | chr8_1:83181402-83181421 | None:intergenic | 40.0% |
| AAATGAGAAGTTAGGCCTTG+AGG | - | chr8_1:83181466-83181485 | None:intergenic | 40.0% | |
| ! | CCCTTGTTTCTTGACAATAC+TGG | + | chr8_1:83181501-83181520 | Msa1220170:CDS | 40.0% |
| AAGCTATCGTTGAGACTGAA+TGG | + | chr8_1:83181701-83181720 | Msa1220170:intron | 40.0% | |
| ! | AGCACCATCATGAACCTTTT+TGG | - | chr8_1:83181838-83181857 | None:intergenic | 40.0% |
| ! | TGTTTATGGACTGAAAGAGG+AGG | + | chr8_1:83181934-83181953 | Msa1220170:CDS | 40.0% |
| GAAGAGGAGCTTATAGTAAG+TGG | - | chr8_1:83182046-83182065 | None:intergenic | 40.0% | |
| AAACAACCACAGCAAGATCA+AGG | + | chr8_1:83182142-83182161 | Msa1220170:CDS | 40.0% | |
| TAACAACCTTGATCTTGCTG+TGG | - | chr8_1:83182151-83182170 | None:intergenic | 40.0% | |
| GATCAAGGTTGTTACATCTC+AGG | + | chr8_1:83182157-83182176 | Msa1220170:CDS | 40.0% | |
| !!! | CATGAGTTTCTGCTGCTTTT+GGG | - | chr8_1:83182259-83182278 | None:intergenic | 40.0% |
| CAGAAACTCATGGCTTGATT+TGG | + | chr8_1:83182267-83182286 | Msa1220170:CDS | 40.0% | |
| AATGGAGATTGAAAGCTGAG+TGG | - | chr8_1:83182308-83182327 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCACAAACCAACG+AGG | + | chr8_1:83182355-83182374 | Msa1220170:CDS | 40.0% |
| AGAGAAACCATTTACCTCGT+TGG | - | chr8_1:83182372-83182391 | None:intergenic | 40.0% | |
| ! | TGCCACTGAGTTGGAGTAAA+AGG | - | chr8_1:83180850-83180869 | None:intergenic | 45.0% |
| GAGTAGAAGATCAGGAGGAA+TGG | - | chr8_1:83180923-83180942 | None:intergenic | 45.0% | |
| TTTGATGTGGTGCATGCAGT+TGG | + | chr8_1:83181069-83181088 | Msa1220170:intron | 45.0% | |
| AGAAAAATAGACCCAGAGCC+AGG | + | chr8_1:83181120-83181139 | Msa1220170:CDS | 45.0% | |
| GAAAAATAGACCCAGAGCCA+GGG | + | chr8_1:83181121-83181140 | Msa1220170:CDS | 45.0% | |
| ! | TGTGAAAGGCACATGCATAG+AGG | + | chr8_1:83181210-83181229 | Msa1220170:CDS | 45.0% |
| ! | GTGAAAGGCACATGCATAGA+GGG | + | chr8_1:83181211-83181230 | Msa1220170:CDS | 45.0% |
| AAACCGTTCAAGAAAGCCTG+TGG | + | chr8_1:83181236-83181255 | Msa1220170:CDS | 45.0% | |
| CTTCCACAGGCTTTCTTGAA+CGG | - | chr8_1:83181242-83181261 | None:intergenic | 45.0% | |
| GAGGAAAGGGTGGTTAAGAT+GGG | - | chr8_1:83181427-83181446 | None:intergenic | 45.0% | |
| AGAGGAAAGGGTGGTTAAGA+TGG | - | chr8_1:83181428-83181447 | None:intergenic | 45.0% | |
| GAGGGTTATGGTAGAGGAAA+GGG | - | chr8_1:83181440-83181459 | None:intergenic | 45.0% | |
| ! | TTATGGACTGAAAGAGGAGG+TGG | + | chr8_1:83181937-83181956 | Msa1220170:CDS | 45.0% |
| GCTTTCTTCACTGAACCTTC+TGG | + | chr8_1:83181968-83181987 | Msa1220170:CDS | 45.0% | |
| !!! | CCATGAGTTTCTGCTGCTTT+TGG | - | chr8_1:83182260-83182279 | None:intergenic | 45.0% |
| CCAAAAGCAGCAGAAACTCA+TGG | + | chr8_1:83182257-83182276 | Msa1220170:CDS | 45.0% | |
| !! | CCATTTACCTCGTTGGTTTG+TGG | - | chr8_1:83182365-83182384 | None:intergenic | 45.0% |
| CCACAAACCAACGAGGTAAA+TGG | + | chr8_1:83182362-83182381 | Msa1220170:CDS | 45.0% | |
| ! | TGCCACTGAGTTGGAGTAAA+AGG | - | chr8_1:83180850-83180869 | None:intergenic | 45.0% |
| GAGTAGAAGATCAGGAGGAA+TGG | - | chr8_1:83180923-83180942 | None:intergenic | 45.0% | |
| TTTGATGTGGTGCATGCAGT+TGG | + | chr8_1:83181069-83181088 | Msa1220170:intron | 45.0% | |
| AGAAAAATAGACCCAGAGCC+AGG | + | chr8_1:83181120-83181139 | Msa1220170:CDS | 45.0% | |
| GAAAAATAGACCCAGAGCCA+GGG | + | chr8_1:83181121-83181140 | Msa1220170:CDS | 45.0% | |
| ! | TGTGAAAGGCACATGCATAG+AGG | + | chr8_1:83181210-83181229 | Msa1220170:CDS | 45.0% |
| ! | GTGAAAGGCACATGCATAGA+GGG | + | chr8_1:83181211-83181230 | Msa1220170:CDS | 45.0% |
| AAACCGTTCAAGAAAGCCTG+TGG | + | chr8_1:83181236-83181255 | Msa1220170:CDS | 45.0% | |
| CTTCCACAGGCTTTCTTGAA+CGG | - | chr8_1:83181242-83181261 | None:intergenic | 45.0% | |
| GAGGAAAGGGTGGTTAAGAT+GGG | - | chr8_1:83181427-83181446 | None:intergenic | 45.0% | |
| AGAGGAAAGGGTGGTTAAGA+TGG | - | chr8_1:83181428-83181447 | None:intergenic | 45.0% | |
| GAGGGTTATGGTAGAGGAAA+GGG | - | chr8_1:83181440-83181459 | None:intergenic | 45.0% | |
| ! | TTATGGACTGAAAGAGGAGG+TGG | + | chr8_1:83181937-83181956 | Msa1220170:CDS | 45.0% |
| GCTTTCTTCACTGAACCTTC+TGG | + | chr8_1:83181968-83181987 | Msa1220170:CDS | 45.0% | |
| !!! | CCATGAGTTTCTGCTGCTTT+TGG | - | chr8_1:83182260-83182279 | None:intergenic | 45.0% |
| CCAAAAGCAGCAGAAACTCA+TGG | + | chr8_1:83182257-83182276 | Msa1220170:CDS | 45.0% | |
| !! | CCATTTACCTCGTTGGTTTG+TGG | - | chr8_1:83182365-83182384 | None:intergenic | 45.0% |
| CCACAAACCAACGAGGTAAA+TGG | + | chr8_1:83182362-83182381 | Msa1220170:CDS | 45.0% | |
| !!! | ATAAACATTTTAATAAAAAA+AGG | - | chr8_1:83181867-83181886 | None:intergenic | 5.0% |
| !!! | ATAAACATTTTAATAAAAAA+AGG | - | chr8_1:83181867-83181886 | None:intergenic | 5.0% |
| TCAAGCTCTTGCCACTGAGT+TGG | - | chr8_1:83180859-83180878 | None:intergenic | 50.0% | |
| ATGTGGTGCATGCAGTTGGA+TGG | + | chr8_1:83181073-83181092 | Msa1220170:intron | 50.0% | |
| GGTTATGGTAGAGGAAAGGG+TGG | - | chr8_1:83181437-83181456 | None:intergenic | 50.0% | |
| GGAGGGTTATGGTAGAGGAA+AGG | - | chr8_1:83181441-83181460 | None:intergenic | 50.0% | |
| AGGATGGAGGGTTATGGTAG+AGG | - | chr8_1:83181446-83181465 | None:intergenic | 50.0% | |
| ACCATAACCCTCCATCCTCA+AGG | + | chr8_1:83181448-83181467 | Msa1220170:CDS | 50.0% | |
| AGTTAGGCCTTGAGGATGGA+GGG | - | chr8_1:83181458-83181477 | None:intergenic | 50.0% | |
| AAGTTAGGCCTTGAGGATGG+AGG | - | chr8_1:83181459-83181478 | None:intergenic | 50.0% | |
| GAGAAGTTAGGCCTTGAGGA+TGG | - | chr8_1:83181462-83181481 | None:intergenic | 50.0% | |
| !!! | GAGTTTCTGCTGCTTTTGGG+TGG | - | chr8_1:83182256-83182275 | None:intergenic | 50.0% |
| GGAGATTGAAAGCTGAGTGG+TGG | - | chr8_1:83182305-83182324 | None:intergenic | 50.0% | |
| TCAAGCTCTTGCCACTGAGT+TGG | - | chr8_1:83180859-83180878 | None:intergenic | 50.0% | |
| ATGTGGTGCATGCAGTTGGA+TGG | + | chr8_1:83181073-83181092 | Msa1220170:intron | 50.0% | |
| GGTTATGGTAGAGGAAAGGG+TGG | - | chr8_1:83181437-83181456 | None:intergenic | 50.0% | |
| GGAGGGTTATGGTAGAGGAA+AGG | - | chr8_1:83181441-83181460 | None:intergenic | 50.0% | |
| AGGATGGAGGGTTATGGTAG+AGG | - | chr8_1:83181446-83181465 | None:intergenic | 50.0% | |
| ACCATAACCCTCCATCCTCA+AGG | + | chr8_1:83181448-83181467 | Msa1220170:CDS | 50.0% | |
| AGTTAGGCCTTGAGGATGGA+GGG | - | chr8_1:83181458-83181477 | None:intergenic | 50.0% | |
| AAGTTAGGCCTTGAGGATGG+AGG | - | chr8_1:83181459-83181478 | None:intergenic | 50.0% | |
| GAGAAGTTAGGCCTTGAGGA+TGG | - | chr8_1:83181462-83181481 | None:intergenic | 50.0% | |
| !!! | GAGTTTCTGCTGCTTTTGGG+TGG | - | chr8_1:83182256-83182275 | None:intergenic | 50.0% |
| GGAGATTGAAAGCTGAGTGG+TGG | - | chr8_1:83182305-83182324 | None:intergenic | 50.0% | |
| AAATAGACCCAGAGCCAGGG+AGG | + | chr8_1:83181124-83181143 | Msa1220170:CDS | 55.0% | |
| TCTGTTCTTCTGCACCTCCC+TGG | - | chr8_1:83181141-83181160 | None:intergenic | 55.0% | |
| ! | GGGAGGTGCAGAAGAACAGA+TGG | + | chr8_1:83181141-83181160 | Msa1220170:CDS | 55.0% |
| GCCTTGAGGATGGAGGGTTA+TGG | - | chr8_1:83181452-83181471 | None:intergenic | 55.0% | |
| AAATAGACCCAGAGCCAGGG+AGG | + | chr8_1:83181124-83181143 | Msa1220170:CDS | 55.0% | |
| TCTGTTCTTCTGCACCTCCC+TGG | - | chr8_1:83181141-83181160 | None:intergenic | 55.0% | |
| ! | GGGAGGTGCAGAAGAACAGA+TGG | + | chr8_1:83181141-83181160 | Msa1220170:CDS | 55.0% |
| GCCTTGAGGATGGAGGGTTA+TGG | - | chr8_1:83181452-83181471 | None:intergenic | 55.0% | |
| ! | TTCTGCACCTCCCTGGCTCT+GGG | - | chr8_1:83181134-83181153 | None:intergenic | 60.0% |
| ! | TTCTGCACCTCCCTGGCTCT+GGG | - | chr8_1:83181134-83181153 | None:intergenic | 60.0% |
| CTTCTGCACCTCCCTGGCTC+TGG | - | chr8_1:83181135-83181154 | None:intergenic | 65.0% | |
| CTTCTGCACCTCCCTGGCTC+TGG | - | chr8_1:83181135-83181154 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 83180769 | 83182453 | 83180769 | ID=Msa1220170;Name=Msa1220170 |
| chr8_1 | mRNA | 83180769 | 83182453 | 83180769 | ID=Msa1220170-mRNA-1;Parent=Msa1220170;Name=Msa1220170-mRNA-1;_AED=0.15;_eAED=0.15;_QI=54|1|0.66|1|1|1|3|0|392 |
| chr8_1 | exon | 83180769 | 83181000 | 83180769 | ID=Msa1220170-mRNA-1:exon:29837;Parent=Msa1220170-mRNA-1 |
| chr8_1 | exon | 83181088 | 83181559 | 83181088 | ID=Msa1220170-mRNA-1:exon:29838;Parent=Msa1220170-mRNA-1 |
| chr8_1 | exon | 83181925 | 83182453 | 83181925 | ID=Msa1220170-mRNA-1:exon:29839;Parent=Msa1220170-mRNA-1 |
| chr8_1 | five_prime_UTR | 83180769 | 83180822 | 83180769 | ID=Msa1220170-mRNA-1:five_prime_utr;Parent=Msa1220170-mRNA-1 |
| chr8_1 | CDS | 83180823 | 83181000 | 83180823 | ID=Msa1220170-mRNA-1:cds;Parent=Msa1220170-mRNA-1 |
| chr8_1 | CDS | 83181088 | 83181559 | 83181088 | ID=Msa1220170-mRNA-1:cds;Parent=Msa1220170-mRNA-1 |
| chr8_1 | CDS | 83181925 | 83182453 | 83181925 | ID=Msa1220170-mRNA-1:cds;Parent=Msa1220170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
