Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220030 | KEH32452.1 | 93.355 | 301 | 1 | 2 | 1 | 283 | 1 | 300 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220030 | sp|Q8L8A6|GRF5_ARATH | 71.053 | 114 | 27 | 3 | 7 | 117 | 14 | 124 | 5.99e-52 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1220030 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa1220030 | 0.829563 | 4.801126e-55 | -8.615850e-47 |
| Msa0015570 | Msa1220030 | 0.816458 | 5.474144e-52 | -8.615850e-47 |
| Msa0018920 | Msa1220030 | 0.831447 | 1.660573e-55 | -8.615850e-47 |
| Msa0020540 | Msa1220030 | 0.821731 | 3.454272e-53 | -8.615850e-47 |
| Msa0032980 | Msa1220030 | 0.808299 | 3.315698e-50 | -8.615850e-47 |
| Msa0053070 | Msa1220030 | 0.826578 | 2.511916e-54 | -8.615850e-47 |
| Msa0057640 | Msa1220030 | 0.806681 | 7.309459e-50 | -8.615850e-47 |
| Msa0067060 | Msa1220030 | 0.841461 | 4.687242e-58 | -8.615850e-47 |
| Msa0090440 | Msa1220030 | 0.804887 | 1.741154e-49 | -8.615850e-47 |
| Msa0091350 | Msa1220030 | 0.818578 | 1.821732e-52 | -8.615850e-47 |
| Msa0098410 | Msa1220030 | 0.849679 | 2.769821e-60 | -8.615850e-47 |
| Msa0106630 | Msa1220030 | 0.818621 | 1.781207e-52 | -8.615850e-47 |
| Msa0112670 | Msa1220030 | 0.829643 | 4.589004e-55 | -8.615850e-47 |
| Msa0606100 | Msa1220030 | 0.862185 | 6.062981e-64 | -8.615850e-47 |
| Msa0607800 | Msa1220030 | 0.812557 | 3.993951e-51 | -8.615850e-47 |
| Msa0608350 | Msa1220030 | 0.821306 | 4.330941e-53 | -8.615850e-47 |
| Msa0613580 | Msa1220030 | 0.800226 | 1.592079e-48 | -8.615850e-47 |
| Msa0613630 | Msa1220030 | 0.822978 | 1.773598e-53 | -8.615850e-47 |
| Msa0615630 | Msa1220030 | 0.856783 | 2.546984e-62 | -8.615850e-47 |
| Msa0620500 | Msa1220030 | 0.847037 | 1.489940e-59 | -8.615850e-47 |
| Msa0621710 | Msa1220030 | 0.801916 | 7.182833e-49 | -8.615850e-47 |
| Msa0622920 | Msa1220030 | 0.848116 | 7.521751e-60 | -8.615850e-47 |
| Msa0625620 | Msa1220030 | 0.806607 | 7.576073e-50 | -8.615850e-47 |
| Msa0647050 | Msa1220030 | 0.848452 | 6.075725e-60 | -8.615850e-47 |
| Msa0647440 | Msa1220030 | 0.811757 | 5.968385e-51 | -8.615850e-47 |
| Msa0648040 | Msa1220030 | 0.809974 | 1.450991e-50 | -8.615850e-47 |
| Msa0648760 | Msa1220030 | 0.827336 | 1.655166e-54 | -8.615850e-47 |
| Msa0654740 | Msa1220030 | 0.824949 | 6.117020e-54 | -8.615850e-47 |
| Msa0657210 | Msa1220030 | 0.826075 | 3.310566e-54 | -8.615850e-47 |
| Msa0668900 | Msa1220030 | 0.814210 | 1.730412e-51 | -8.615850e-47 |
| Msa0689720 | Msa1220030 | 0.804928 | 1.706767e-49 | -8.615850e-47 |
| Msa0690320 | Msa1220030 | 0.805648 | 1.205963e-49 | -8.615850e-47 |
| Msa0690740 | Msa1220030 | 0.815178 | 1.056184e-51 | -8.615850e-47 |
| Msa0691270 | Msa1220030 | 0.823294 | 1.496373e-53 | -8.615850e-47 |
| Msa0698730 | Msa1220030 | 0.825775 | 3.900170e-54 | -8.615850e-47 |
| Msa0700210 | Msa1220030 | 0.802121 | 6.519859e-49 | -8.615850e-47 |
| Msa0700500 | Msa1220030 | 0.809461 | 1.870790e-50 | -8.615850e-47 |
| Msa0701250 | Msa1220030 | 0.832416 | 9.569760e-56 | -8.615850e-47 |
| Msa0707260 | Msa1220030 | 0.802996 | 4.303290e-49 | -8.615850e-47 |
| Msa0713920 | Msa1220030 | 0.831267 | 1.839208e-55 | -8.615850e-47 |
| Msa0714520 | Msa1220030 | 0.801435 | 9.015564e-49 | -8.615850e-47 |
| Msa0717900 | Msa1220030 | 0.831121 | 1.997162e-55 | -8.615850e-47 |
| Msa0720280 | Msa1220030 | 0.811705 | 6.124643e-51 | -8.615850e-47 |
| Msa0743440 | Msa1220030 | 0.803590 | 3.242462e-49 | -8.615850e-47 |
| Msa0747740 | Msa1220030 | 0.845974 | 2.906064e-59 | -8.615850e-47 |
| Msa0769730 | Msa1220030 | 0.804627 | 1.972618e-49 | -8.615850e-47 |
| Msa0790630 | Msa1220030 | 0.804241 | 2.374227e-49 | -8.615850e-47 |
| Msa0800660 | Msa1220030 | 0.807520 | 4.854952e-50 | -8.615850e-47 |
| Msa0803140 | Msa1220030 | 0.810442 | 1.150437e-50 | -8.615850e-47 |
| Msa0811020 | Msa1220030 | 0.806779 | 6.969829e-50 | -8.615850e-47 |
| Msa0816080 | Msa1220030 | 0.828338 | 9.505511e-55 | -8.615850e-47 |
| Msa0818150 | Msa1220030 | 0.825866 | 3.710766e-54 | -8.615850e-47 |
| Msa0821160 | Msa1220030 | 0.803227 | 3.855670e-49 | -8.615850e-47 |
| Msa0837680 | Msa1220030 | 0.811017 | 8.638640e-51 | -8.615850e-47 |
| Msa0841500 | Msa1220030 | 0.808079 | 3.694302e-50 | -8.615850e-47 |
| Msa0123320 | Msa1220030 | 0.816689 | 4.857342e-52 | -8.615850e-47 |
| Msa0125590 | Msa1220030 | 0.805882 | 1.077041e-49 | -8.615850e-47 |
| Msa0127340 | Msa1220030 | 0.802728 | 4.887333e-49 | -8.615850e-47 |
| Msa0127680 | Msa1220030 | 0.804063 | 2.585463e-49 | -8.615850e-47 |
| Msa0141640 | Msa1220030 | 0.816303 | 5.928228e-52 | -8.615850e-47 |
| Msa0141750 | Msa1220030 | 0.807905 | 4.023337e-50 | -8.615850e-47 |
| Msa0153210 | Msa1220030 | 0.823842 | 1.113961e-53 | -8.615850e-47 |
| Msa0156050 | Msa1220030 | 0.806734 | 7.122648e-50 | -8.615850e-47 |
| Msa0156090 | Msa1220030 | 0.812175 | 4.838412e-51 | -8.615850e-47 |
| Msa0156510 | Msa1220030 | 0.807239 | 5.569964e-50 | -8.615850e-47 |
| Msa0159590 | Msa1220030 | 0.833167 | 6.229149e-56 | -8.615850e-47 |
| Msa0159620 | Msa1220030 | 0.822113 | 2.818027e-53 | -8.615850e-47 |
| Msa0160160 | Msa1220030 | 0.828522 | 8.579705e-55 | -8.615850e-47 |
| Msa0160170 | Msa1220030 | 0.831038 | 2.093642e-55 | -8.615850e-47 |
| Msa0165830 | Msa1220030 | 0.820371 | 7.106466e-53 | -8.615850e-47 |
| Msa0166170 | Msa1220030 | 0.801019 | 1.096669e-48 | -8.615850e-47 |
| Msa0168050 | Msa1220030 | 0.815451 | 9.180959e-52 | -8.615850e-47 |
| Msa0170070 | Msa1220030 | 0.804032 | 2.624845e-49 | -8.615850e-47 |
| Msa0186360 | Msa1220030 | 0.819524 | 1.109954e-52 | -8.615850e-47 |
| Msa0368860 | Msa1220030 | 0.803780 | 2.960295e-49 | -8.615850e-47 |
| Msa0373170 | Msa1220030 | 0.860553 | 1.906869e-63 | -8.615850e-47 |
| Msa0373500 | Msa1220030 | 0.813426 | 2.574746e-51 | -8.615850e-47 |
| Msa0413170 | Msa1220030 | 0.804222 | 2.395594e-49 | -8.615850e-47 |
| Msa0420670 | Msa1220030 | 0.812505 | 4.098971e-51 | -8.615850e-47 |
| Msa0421750 | Msa1220030 | 0.860192 | 2.451537e-63 | -8.615850e-47 |
| Msa0430480 | Msa1220030 | 0.802493 | 5.464959e-49 | -8.615850e-47 |
| Msa0433760 | Msa1220030 | 0.826695 | 2.355994e-54 | -8.615850e-47 |
| Msa0456670 | Msa1220030 | 0.821041 | 4.986075e-53 | -8.615850e-47 |
| Msa0462780 | Msa1220030 | 0.811360 | 7.279447e-51 | -8.615850e-47 |
| Msa0466520 | Msa1220030 | 0.811283 | 7.564583e-51 | -8.615850e-47 |
| Msa0467690 | Msa1220030 | 0.858965 | 5.735058e-63 | -8.615850e-47 |
| Msa0468620 | Msa1220030 | 0.815542 | 8.765240e-52 | -8.615850e-47 |
| Msa0477630 | Msa1220030 | 0.819834 | 9.430843e-53 | -8.615850e-47 |
| Msa0480730 | Msa1220030 | 0.804495 | 2.102017e-49 | -8.615850e-47 |
| Msa0989370 | Msa1220030 | 0.810642 | 1.041445e-50 | -8.615850e-47 |
| Msa1000780 | Msa1220030 | 0.809983 | 1.444804e-50 | -8.615850e-47 |
| Msa1000970 | Msa1220030 | 0.815286 | 9.990574e-52 | -8.615850e-47 |
| Msa1008670 | Msa1220030 | 0.840673 | 7.544863e-58 | -8.615850e-47 |
| Msa1008680 | Msa1220030 | 0.802463 | 5.542637e-49 | -8.615850e-47 |
| Msa1033920 | Msa1220030 | 0.816575 | 5.153962e-52 | -8.615850e-47 |
| Msa1036090 | Msa1220030 | 0.836078 | 1.155295e-56 | -8.615850e-47 |
| Msa1060900 | Msa1220030 | 0.829717 | 4.402140e-55 | -8.615850e-47 |
| Msa1076020 | Msa1220030 | 0.844510 | 7.228828e-59 | -8.615850e-47 |
| Msa1078880 | Msa1220030 | 0.833248 | 5.948617e-56 | -8.615850e-47 |
| Msa1078970 | Msa1220030 | 0.826225 | 3.049420e-54 | -8.615850e-47 |
| Msa1082380 | Msa1220030 | 0.830145 | 3.462186e-55 | -8.615850e-47 |
| Msa0270680 | Msa1220030 | 0.802670 | 5.024550e-49 | -8.615850e-47 |
| Msa0281540 | Msa1220030 | 0.803785 | 2.953081e-49 | -8.615850e-47 |
| Msa0320580 | Msa1220030 | 0.806076 | 9.806585e-50 | -8.615850e-47 |
| Msa0344110 | Msa1220030 | 0.808888 | 2.481654e-50 | -8.615850e-47 |
| Msa0358060 | Msa1220030 | 0.813005 | 3.186211e-51 | -8.615850e-47 |
| Msa1114630 | Msa1220030 | 0.801599 | 8.346112e-49 | -8.615850e-47 |
| Msa1116190 | Msa1220030 | 0.807968 | 3.900827e-50 | -8.615850e-47 |
| Msa1116660 | Msa1220030 | 0.803118 | 4.060874e-49 | -8.615850e-47 |
| Msa1116740 | Msa1220030 | 0.801255 | 9.816070e-49 | -8.615850e-47 |
| Msa1122560 | Msa1220030 | 0.814282 | 1.667980e-51 | -8.615850e-47 |
| Msa1127280 | Msa1220030 | 0.834743 | 2.512716e-56 | -8.615850e-47 |
| Msa1139050 | Msa1220030 | 0.832449 | 9.396240e-56 | -8.615850e-47 |
| Msa1148630 | Msa1220030 | 0.836166 | 1.097290e-56 | -8.615850e-47 |
| Msa1149450 | Msa1220030 | 0.836265 | 1.035777e-56 | -8.615850e-47 |
| Msa1159590 | Msa1220030 | 0.829074 | 6.307074e-55 | -8.615850e-47 |
| Msa1162880 | Msa1220030 | 0.833444 | 5.314055e-56 | -8.615850e-47 |
| Msa1163180 | Msa1220030 | 0.842924 | 1.921164e-58 | -8.615850e-47 |
| Msa1163350 | Msa1220030 | 0.818335 | 2.068335e-52 | -8.615850e-47 |
| Msa1165480 | Msa1220030 | 0.843039 | 1.790350e-58 | -8.615850e-47 |
| Msa1169190 | Msa1220030 | 0.833258 | 5.911917e-56 | -8.615850e-47 |
| Msa1169690 | Msa1220030 | 0.802860 | 4.590050e-49 | -8.615850e-47 |
| Msa1183740 | Msa1220030 | 0.814437 | 1.541437e-51 | -8.615850e-47 |
| Msa1190390 | Msa1220030 | 0.836889 | 7.182429e-57 | -8.615850e-47 |
| Msa1191000 | Msa1220030 | 0.833033 | 6.729317e-56 | -8.615850e-47 |
| Msa1201780 | Msa1220030 | 0.807219 | 5.625295e-50 | -8.615850e-47 |
| Msa1213830 | Msa1220030 | 0.834412 | 3.042282e-56 | -8.615850e-47 |
| Msa1214350 | Msa1220030 | 0.834094 | 3.654974e-56 | -8.615850e-47 |
| Msa1215980 | Msa1220030 | 0.848065 | 7.768748e-60 | -8.615850e-47 |
| Msa1218820 | Msa1220030 | 0.811839 | 5.727320e-51 | -8.615850e-47 |
| Msa1219770 | Msa1220030 | 0.810784 | 9.703998e-51 | -8.615850e-47 |
| Msa1220030 | Msa1220170 | 0.913690 | 4.591854e-84 | -8.615850e-47 |
| Msa1220030 | Msa1223390 | 0.819386 | 1.193701e-52 | -8.615850e-47 |
| Msa1220030 | Msa1252790 | 0.805749 | 1.148749e-49 | -8.615850e-47 |
| Msa1220030 | Msa1254420 | 0.830072 | 3.607919e-55 | -8.615850e-47 |
| Msa1220030 | Msa1254540 | 0.836652 | 8.255819e-57 | -8.615850e-47 |
| Msa1220030 | Msa1261050 | 0.837936 | 3.872939e-57 | -8.615850e-47 |
| Msa1220030 | Msa1263740 | 0.811837 | 5.733880e-51 | -8.615850e-47 |
| Msa1220030 | Msa1263780 | 0.817504 | 3.187287e-52 | -8.615850e-47 |
| Msa1220030 | Msa1266300 | 0.903169 | 4.580604e-79 | -8.615850e-47 |
| Msa1220030 | Msa1266690 | 0.822466 | 2.333405e-53 | -8.615850e-47 |
| Msa1220030 | Msa1267930 | 0.830801 | 2.393188e-55 | -8.615850e-47 |
| Msa1220030 | Msa1268540 | 0.830541 | 2.771067e-55 | -8.615850e-47 |
| Msa1220030 | Msa1279120 | 0.812752 | 3.620237e-51 | -8.615850e-47 |
| Msa1220030 | Msa1294460 | 0.819313 | 1.239972e-52 | -8.615850e-47 |
| Msa1220030 | Msa1294790 | 0.825999 | 3.450328e-54 | -8.615850e-47 |
| Msa1220030 | Msa1300460 | 0.853233 | 2.735958e-61 | -8.615850e-47 |
| Msa1220030 | Msa1301820 | 0.820262 | 7.526711e-53 | -8.615850e-47 |
| Msa1220030 | Msa1305780 | 0.815319 | 9.826604e-52 | -8.615850e-47 |
| Msa1220030 | Msa1305920 | 0.831283 | 1.822794e-55 | -8.615850e-47 |
| Msa1220030 | Msa1332950 | 0.838851 | 2.249521e-57 | -8.615850e-47 |
| Msa1220030 | Msa1333360 | 0.815935 | 7.162665e-52 | -8.615850e-47 |
| Msa1220030 | Msa1339170 | 0.848001 | 8.090847e-60 | -8.615850e-47 |
| Msa1220030 | Msa1361930 | 0.831557 | 1.560181e-55 | -8.615850e-47 |
| Msa1220030 | Msa1381470 | 0.817871 | 2.633656e-52 | -8.615850e-47 |
| Msa1220030 | Msa1393560 | 0.838866 | 2.229668e-57 | -8.615850e-47 |
| Msa1220030 | Msa1399190 | 0.823824 | 1.124748e-53 | -8.615850e-47 |
| Msa1220030 | Msa1406720 | 0.807038 | 6.142783e-50 | -8.615850e-47 |
| Msa1220030 | Msa1417060 | 0.808431 | 3.107498e-50 | -8.615850e-47 |
| Msa1220030 | Msa1426320 | 0.806346 | 8.603484e-50 | -8.615850e-47 |
| Msa1220030 | Msa1432520 | 0.804349 | 2.254109e-49 | -8.615850e-47 |
| Msa1220030 | Msa1434380 | 0.987990 | 2.701212e-172 | -8.615850e-47 |
| Msa1220030 | Msa1434640 | 0.820194 | 7.801613e-53 | -8.615850e-47 |
| Msa1220030 | Msa1442260 | 0.817114 | 3.899957e-52 | -8.615850e-47 |
| Msa1220030 | Msa1446100 | 0.801494 | 8.769800e-49 | -8.615850e-47 |
| Msa1220030 | Msa1447170 | 0.813210 | 2.871983e-51 | -8.615850e-47 |
| Msa1220030 | Msa1457840 | 0.805774 | 1.134748e-49 | -8.615850e-47 |
| Msa0503990 | Msa1220030 | 0.812422 | 4.273356e-51 | -8.615850e-47 |
| Msa0504720 | Msa1220030 | 0.808825 | 2.560349e-50 | -8.615850e-47 |
| Msa0506540 | Msa1220030 | 0.801444 | 8.980485e-49 | -8.615850e-47 |
| Msa0506880 | Msa1220030 | 0.806396 | 8.396663e-50 | -8.615850e-47 |
| Msa0507810 | Msa1220030 | 0.801702 | 7.950244e-49 | -8.615850e-47 |
| Msa0507820 | Msa1220030 | 0.800645 | 1.307909e-48 | -8.615850e-47 |
| Msa0507920 | Msa1220030 | 0.810477 | 1.130329e-50 | -8.615850e-47 |
| Msa0512530 | Msa1220030 | 0.812140 | 4.925272e-51 | -8.615850e-47 |
| Msa0513560 | Msa1220030 | 0.822371 | 2.454958e-53 | -8.615850e-47 |
| Msa0513620 | Msa1220030 | 0.819823 | 9.484285e-53 | -8.615850e-47 |
| Msa0514020 | Msa1220030 | 0.855389 | 6.518110e-62 | -8.615850e-47 |
| Msa0514500 | Msa1220030 | 0.818270 | 2.139977e-52 | -8.615850e-47 |
| Msa0520870 | Msa1220030 | 0.817861 | 2.647572e-52 | -8.615850e-47 |
| Msa0521680 | Msa1220030 | 0.822866 | 1.883980e-53 | -8.615850e-47 |
| Msa0527850 | Msa1220030 | 0.824461 | 7.970114e-54 | -8.615850e-47 |
| Msa0534100 | Msa1220030 | 0.816635 | 4.996039e-52 | -8.615850e-47 |
| Msa0537990 | Msa1220030 | 0.812778 | 3.571757e-51 | -8.615850e-47 |
| Msa0541740 | Msa1220030 | 0.830818 | 2.370982e-55 | -8.615850e-47 |
| Msa0550590 | Msa1220030 | 0.842590 | 2.356913e-58 | -8.615850e-47 |
| Msa0554300 | Msa1220030 | 0.822568 | 2.209340e-53 | -8.615850e-47 |
| Msa0561560 | Msa1220030 | 0.844877 | 5.757984e-59 | -8.615850e-47 |
| Msa0563740 | Msa1220030 | 0.826167 | 3.147278e-54 | -8.615850e-47 |
| Msa0563900 | Msa1220030 | 0.819758 | 9.815077e-53 | -8.615850e-47 |
| Msa0564980 | Msa1220030 | 0.823977 | 1.035843e-53 | -8.615850e-47 |
| Msa0572830 | Msa1220030 | 0.831928 | 1.264058e-55 | -8.615850e-47 |
| Msa0577280 | Msa1220030 | 0.851689 | 7.535806e-61 | -8.615850e-47 |
| Msa0577330 | Msa1220030 | 0.853605 | 2.140010e-61 | -8.615850e-47 |
| Msa0582460 | Msa1220030 | 0.816705 | 4.819253e-52 | -8.615850e-47 |
| Msa0586200 | Msa1220030 | 0.827833 | 1.257806e-54 | -8.615850e-47 |
| Msa0590200 | Msa1220030 | 0.816791 | 4.609207e-52 | -8.615850e-47 |
| Msa0593400 | Msa1220030 | 0.803725 | 3.039920e-49 | -8.615850e-47 |
| Msa0861440 | Msa1220030 | 0.815179 | 1.055361e-51 | -8.615850e-47 |
| Msa0863620 | Msa1220030 | 0.820159 | 7.945679e-53 | -8.615850e-47 |
| Msa0900760 | Msa1220030 | 0.803224 | 3.861410e-49 | -8.615850e-47 |
| Msa0901150 | Msa1220030 | 0.807078 | 6.025609e-50 | -8.615850e-47 |
| Msa0909760 | Msa1220030 | 0.801452 | 8.945420e-49 | -8.615850e-47 |
| Msa0926310 | Msa1220030 | 0.823643 | 1.240028e-53 | -8.615850e-47 |
| Msa0931590 | Msa1220030 | 0.806982 | 6.312249e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220030 | MtrunA17_Chr4g0070591 | 93.355 | 301 | 1 | 2 | 1 | 283 | 1 | 300 | 0.0 | 570 |
| Msa1220030 | MtrunA17_Chr2g0300511 | 60.656 | 305 | 84 | 10 | 5 | 278 | 3 | 302 | 1.17e-105 | 311 |
| Msa1220030 | MtrunA17_Chr8g0343881 | 70.161 | 124 | 29 | 4 | 1 | 119 | 1 | 121 | 8.86e-56 | 183 |
| Msa1220030 | MtrunA17_Chr4g0021261 | 40.433 | 277 | 138 | 9 | 9 | 279 | 25 | 280 | 5.66e-52 | 173 |
| Msa1220030 | MtrunA17_Chr5g0409471 | 36.508 | 252 | 141 | 5 | 9 | 259 | 16 | 249 | 1.94e-40 | 142 |
| Msa1220030 | MtrunA17_Chr1g0152191 | 56.897 | 116 | 44 | 2 | 7 | 117 | 142 | 256 | 2.45e-40 | 148 |
| Msa1220030 | MtrunA17_Chr7g0265931 | 52.206 | 136 | 44 | 4 | 6 | 127 | 68 | 196 | 1.53e-37 | 136 |
| Msa1220030 | MtrunA17_Chr3g0127641 | 48.739 | 119 | 42 | 4 | 9 | 127 | 112 | 211 | 6.31e-28 | 112 |
| Msa1220030 | MtrunA17_Chr8g0351521 | 45.536 | 112 | 47 | 3 | 6 | 117 | 51 | 148 | 1.30e-21 | 94.0 |
| Msa1220030 | MtrunA17_Chr8g0351521 | 45.714 | 70 | 29 | 1 | 73 | 142 | 302 | 362 | 2.17e-13 | 69.7 |
| Msa1220030 | MtrunA17_Chr8g0351291 | 64.103 | 39 | 14 | 0 | 73 | 111 | 51 | 89 | 8.76e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220030 | AT3G13960.1 | 71.053 | 114 | 27 | 3 | 7 | 117 | 14 | 124 | 6.09e-53 | 177 |
| Msa1220030 | AT2G06200.2 | 66.667 | 120 | 29 | 2 | 7 | 115 | 43 | 162 | 4.72e-49 | 164 |
| Msa1220030 | AT2G06200.1 | 66.667 | 120 | 29 | 2 | 7 | 115 | 4 | 123 | 6.19e-49 | 163 |
| Msa1220030 | AT4G37740.1 | 54.264 | 129 | 54 | 3 | 7 | 134 | 162 | 286 | 5.90e-42 | 151 |
| Msa1220030 | AT2G36400.1 | 57.377 | 122 | 43 | 3 | 10 | 125 | 77 | 195 | 2.12e-37 | 137 |
| Msa1220030 | AT2G22840.1 | 57.143 | 112 | 44 | 2 | 7 | 117 | 131 | 239 | 2.22e-35 | 133 |
| Msa1220030 | AT3G52910.1 | 53.390 | 118 | 39 | 3 | 10 | 117 | 83 | 194 | 1.14e-33 | 126 |
| Msa1220030 | AT5G53660.1 | 50.000 | 110 | 38 | 2 | 8 | 117 | 58 | 150 | 1.90e-27 | 109 |
| Msa1220030 | AT2G06200.3 | 92.157 | 51 | 2 | 1 | 67 | 115 | 1 | 51 | 1.43e-26 | 102 |
| Msa1220030 | AT4G24150.3 | 42.149 | 121 | 64 | 2 | 2 | 117 | 104 | 223 | 1.85e-23 | 99.4 |
| Msa1220030 | AT4G24150.2 | 42.149 | 121 | 64 | 2 | 2 | 117 | 142 | 261 | 2.63e-23 | 99.4 |
| Msa1220030 | AT4G24150.1 | 36.986 | 146 | 61 | 3 | 2 | 117 | 142 | 286 | 2.84e-21 | 93.6 |
| Msa1220030 | AT2G45480.2 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 6.65e-19 | 85.1 |
| Msa1220030 | AT2G45480.3 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 2.96e-18 | 84.7 |
| Msa1220030 | AT2G45480.3 | 41.935 | 93 | 42 | 3 | 70 | 155 | 303 | 390 | 3.19e-13 | 69.7 |
| Msa1220030 | AT2G45480.1 | 41.441 | 111 | 64 | 1 | 5 | 114 | 17 | 127 | 2.96e-18 | 84.7 |
| Msa1220030 | AT2G45480.1 | 41.935 | 93 | 42 | 3 | 70 | 155 | 301 | 388 | 3.26e-13 | 69.7 |
Find 63 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGGAACAGGTATGTTTA+TGG | 0.231611 | 8_1:+83040090 | Msa1220030:intron |
| TGCCACTGAGTTGGAGTAAA+AGG | 0.276188 | 8_1:-83039017 | None:intergenic |
| CTTCTGCACCTCCCTGGCTC+TGG | 0.278943 | 8_1:-83039302 | None:intergenic |
| GCTTTCTTCACTGAACCTTC+TGG | 0.302685 | 8_1:+83040138 | Msa1220030:CDS |
| CTTTCACAGTACTTTGAATC+TGG | 0.319625 | 8_1:-83039365 | None:intergenic |
| AAAAGAGGAAGAGGAGCTTA+TGG | 0.356828 | 8_1:-83040220 | None:intergenic |
| CTTCTTCAATGGATGATTCA+TGG | 0.368355 | 8_1:+83040181 | Msa1220030:CDS |
| TTCTGCACCTCCCTGGCTCT+GGG | 0.368474 | 8_1:-83039301 | None:intergenic |
| ATCTACAAATACATGGCTTC+TGG | 0.368517 | 8_1:+83039062 | Msa1220030:CDS |
| TTGTCTTGAAATGAGAAGTT+AGG | 0.391585 | 8_1:-83039641 | None:intergenic |
| AGAGGAAAGGGTGGTTAAGA+TGG | 0.391821 | 8_1:-83039595 | None:intergenic |
| GAACTATTTACCAATGGGAT+TGG | 0.400450 | 8_1:+83039265 | Msa1220030:CDS |
| TTTAAACAGAGAAATTGTTC+TGG | 0.401538 | 8_1:+83040240 | Msa1220030:CDS |
| AACTATTTACCAATGGGATT+GGG | 0.420553 | 8_1:+83039266 | Msa1220030:CDS |
| GCCTTGAGGATGGAGGGTTA+TGG | 0.442680 | 8_1:-83039619 | None:intergenic |
| AAGTTTATCAGCTTCTTCAA+TGG | 0.445043 | 8_1:+83040170 | Msa1220030:CDS |
| GAGGGTTATGGTAGAGGAAA+GGG | 0.446918 | 8_1:-83039607 | None:intergenic |
| TTGATAGTGAGTAGAAGATC+AGG | 0.446923 | 8_1:-83039098 | None:intergenic |
| AAGCATAAGAAGAGTGTTGA+GGG | 0.452542 | 8_1:-83039568 | None:intergenic |
| TCTGTTCTTCTGCACCTCCC+TGG | 0.454328 | 8_1:-83039308 | None:intergenic |
| ACAATTTCTCTGTTTAAAAG+AGG | 0.457057 | 8_1:-83040235 | None:intergenic |
| GAGGAAAGGGTGGTTAAGAT+GGG | 0.457253 | 8_1:-83039594 | None:intergenic |
| GAGTAGAAGATCAGGAGGAA+TGG | 0.465599 | 8_1:-83039090 | None:intergenic |
| GTAAGAGTACTCATTGTCAT+TGG | 0.465700 | 8_1:-83040268 | None:intergenic |
| CTTCCACAGGCTTTCTTGAA+CGG | 0.472599 | 8_1:-83039409 | None:intergenic |
| GGATGGAACTATTTACCAAT+GGG | 0.479254 | 8_1:+83039260 | Msa1220030:CDS |
| CAATGATGAATGGAAGAAAC+AGG | 0.479723 | 8_1:+83038991 | Msa1220030:exon |
| GAAGAACAGATGGAAAGAAA+TGG | 0.480263 | 8_1:+83039321 | Msa1220030:CDS |
| AAGAAGAGTGTTGAGGGTAA+TGG | 0.482978 | 8_1:-83039562 | None:intergenic |
| GATCAAGGTTGTTACATCTC+AGG | 0.490399 | 8_1:+83040327 | Msa1220030:CDS |
| TCTCTGTTTAAAAGAGGAAG+AGG | 0.498513 | 8_1:-83040229 | None:intergenic |
| TAACAAACAACAATGATGAA+TGG | 0.501615 | 8_1:+83038981 | Msa1220030:exon |
| AGGATGGAGGGTTATGGTAG+AGG | 0.503413 | 8_1:-83039613 | None:intergenic |
| GTGTGGTGCATGCAGTTGGA+TGG | 0.510680 | 8_1:+83039243 | Msa1220030:intron |
| TCAAGCTCTTGCCACTGAGT+TGG | 0.513392 | 8_1:-83039026 | None:intergenic |
| TTATGGACTGAAAGAGGAGG+TGG | 0.522907 | 8_1:+83040107 | Msa1220030:CDS |
| GAAGAGGAGCTTATGGTAAG+TGG | 0.526833 | 8_1:-83040213 | None:intergenic |
| AAGATTGTTGAAGTAGCAGC+AGG | 0.534940 | 8_1:-83039461 | None:intergenic |
| AAACAACCACAGCAAGATCA+AGG | 0.541674 | 8_1:+83040312 | Msa1220030:CDS |
| GTGAAAGGCACATGCATAGA+GGG | 0.547205 | 8_1:+83039381 | Msa1220030:CDS |
| AAGAGAAGAGAAGAGAAGAG+AGG | 0.547431 | 8_1:-83038946 | None:intergenic |
| GAAGCATAAGAAGAGTGTTG+AGG | 0.548399 | 8_1:-83039569 | None:intergenic |
| GGAGGGTTATGGTAGAGGAA+AGG | 0.556801 | 8_1:-83039608 | None:intergenic |
| GAACAGATGGAAAGAAATGG+AGG | 0.559737 | 8_1:+83039324 | Msa1220030:CDS |
| TGGATGGAACTATTTACCAA+TGG | 0.564553 | 8_1:+83039259 | Msa1220030:CDS |
| ATAGTGAGTAGAAGATCAGG+AGG | 0.571348 | 8_1:-83039095 | None:intergenic |
| CAGATTCAAAGTACTGTGAA+AGG | 0.571794 | 8_1:+83039366 | Msa1220030:CDS |
| GGGAGGTGCAGAAGAACAGA+TGG | 0.577454 | 8_1:+83039311 | Msa1220030:CDS |
| AAACTTCTTATAGTTCCAGA+AGG | 0.579842 | 8_1:-83040153 | None:intergenic |
| AAGTTAGGCCTTGAGGATGG+AGG | 0.587194 | 8_1:-83039626 | None:intergenic |
| ACCATAACCCTCCATCCTCA+AGG | 0.592083 | 8_1:+83039618 | Msa1220030:CDS |
| AAATGAGAAGTTAGGCCTTG+AGG | 0.594153 | 8_1:-83039633 | None:intergenic |
| AGTTAGGCCTTGAGGATGGA+GGG | 0.597805 | 8_1:-83039625 | None:intergenic |
| GTATGTTTATGGACTGAAAG+AGG | 0.601366 | 8_1:+83040101 | Msa1220030:CDS |
| GAGAAGTTAGGCCTTGAGGA+TGG | 0.604526 | 8_1:-83039629 | None:intergenic |
| AGCTCTTATCTACAAATACA+TGG | 0.606523 | 8_1:+83039055 | Msa1220030:CDS |
| TAACAACCTTGATCTTGCTG+TGG | 0.626299 | 8_1:-83040318 | None:intergenic |
| TGTGAAAGGCACATGCATAG+AGG | 0.626931 | 8_1:+83039380 | Msa1220030:CDS |
| AAACCGTTCAAGAAAGCCTG+TGG | 0.641388 | 8_1:+83039406 | Msa1220030:CDS |
| TGTTTATGGACTGAAAGAGG+AGG | 0.650765 | 8_1:+83040104 | Msa1220030:CDS |
| AAATAGACCCAGAGCCAGGG+AGG | 0.659120 | 8_1:+83039294 | Msa1220030:CDS |
| GGTTATGGTAGAGGAAAGGG+TGG | 0.659870 | 8_1:-83039604 | None:intergenic |
| TTACAGTGTTGAGACTGATG+AGG | 0.793602 | 8_1:-83039152 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAATAAAATAAAAAC+AGG | + | chr8_1:83042621-83042640 | Msa1220030:intron | 10.0% |
| !! | TATATATAGTCATTCATATA+TGG | - | chr8_1:83039190-83039209 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTCAAATTATTAT+CGG | - | chr8_1:83040684-83040703 | None:intergenic | 15.0% |
| !! | ACAATGGTAAAAATTATTAT+TGG | - | chr8_1:83040747-83040766 | None:intergenic | 15.0% |
| !! | TAATTGAATGTAAATTATCA+TGG | + | chr8_1:83040882-83040901 | Msa1220030:intron | 15.0% |
| !!! | TGATTAATGTGTTAAAATTT+TGG | + | chr8_1:83041539-83041558 | Msa1220030:intron | 15.0% |
| !!! | GATTAATGTGTTAAAATTTT+GGG | + | chr8_1:83041540-83041559 | Msa1220030:intron | 15.0% |
| !!! | TTAAAAATTAGTTTCATAGT+AGG | - | chr8_1:83041737-83041756 | None:intergenic | 15.0% |
| !!! | TATGAAACTAATTTTTAAGT+TGG | + | chr8_1:83041739-83041758 | Msa1220030:intron | 15.0% |
| !! | AAATAATTCAATAAGAAGTT+TGG | - | chr8_1:83041798-83041817 | None:intergenic | 15.0% |
| !!! | TTGTATTAGTTTTAAAAGAA+AGG | + | chr8_1:83042222-83042241 | Msa1220030:intron | 15.0% |
| !!! | TTTAAAGTTTTTCTTACATA+TGG | - | chr8_1:83042417-83042436 | None:intergenic | 15.0% |
| !! | AAAATAGGGTTATTAATTAT+TGG | + | chr8_1:83042723-83042742 | Msa1220030:intron | 15.0% |
| !! | AGAAATATATATGATAGTAT+AGG | + | chr8_1:83042965-83042984 | Msa1220030:intron | 15.0% |
| !!! | TTAAGTTGTTTATTCAAACA+TGG | - | chr8_1:83039769-83039788 | None:intergenic | 20.0% |
| !!! | CTTATCGATTATAAACTTAT+AGG | - | chr8_1:83039841-83039860 | None:intergenic | 20.0% |
| !! | AGAGAACTTATAAAAATAAG+TGG | + | chr8_1:83039899-83039918 | Msa1220030:intron | 20.0% |
| !!! | TTTATGAAAGATTCTCTTTT+TGG | + | chr8_1:83040052-83040071 | Msa1220030:intron | 20.0% |
| !!! | ACTAATTTTTAAGTTGGTAA+TGG | + | chr8_1:83041745-83041764 | Msa1220030:intron | 20.0% |
| !! | AACTATAAAAACATCACATT+GGG | - | chr8_1:83042092-83042111 | None:intergenic | 20.0% |
| !! | AAACTATAAAAACATCACAT+TGG | - | chr8_1:83042093-83042112 | None:intergenic | 20.0% |
| !! | TCTATAACAAATCTAACAAT+TGG | + | chr8_1:83042478-83042497 | Msa1220030:intron | 20.0% |
| !! | CTATAACAAATCTAACAATT+GGG | + | chr8_1:83042479-83042498 | Msa1220030:intron | 20.0% |
| !! | TAGTATTACTACAAGAAAAT+AGG | + | chr8_1:83042708-83042727 | Msa1220030:intron | 20.0% |
| !! | AGTATTACTACAAGAAAATA+GGG | + | chr8_1:83042709-83042728 | Msa1220030:intron | 20.0% |
| ! | TAACAAACAACAATGATGAA+TGG | + | chr8_1:83038981-83039000 | Msa1220030:exon | 25.0% |
| ! | CTTTAAACCAACACATATTT+AGG | + | chr8_1:83039743-83039762 | Msa1220030:intron | 25.0% |
| ! | ACAATTTCTCTGTTTAAAAG+AGG | - | chr8_1:83040238-83040257 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAATTGTTC+TGG | + | chr8_1:83040240-83040259 | Msa1220030:CDS | 25.0% |
| ! | AAGAAACATTCATGAAACAT+GGG | + | chr8_1:83040355-83040374 | Msa1220030:intron | 25.0% |
| !!! | TATTATTGGTGTCAATGTAT+CGG | - | chr8_1:83040848-83040867 | None:intergenic | 25.0% |
| ! | TGAGTTTCGCAAATTATTAT+TGG | - | chr8_1:83040862-83040881 | None:intergenic | 25.0% |
| ! | GACCTTAGATTCAATTAAAA+GGG | - | chr8_1:83040986-83041005 | None:intergenic | 25.0% |
| ! | TGACCTTAGATTCAATTAAA+AGG | - | chr8_1:83040987-83041006 | None:intergenic | 25.0% |
| !! | GTTCATTCATATTTTCTGTA+AGG | + | chr8_1:83041043-83041062 | Msa1220030:intron | 25.0% |
| ! | TAGTTAGAATATTTGACCTA+TGG | + | chr8_1:83041624-83041643 | Msa1220030:intron | 25.0% |
| !!! | TTTATTGGCTCCTATTTTAT+CGG | + | chr8_1:83041825-83041844 | Msa1220030:intron | 25.0% |
| ! | ATTAAGTTCTTATCACCAAA+AGG | - | chr8_1:83041881-83041900 | None:intergenic | 25.0% |
| !! | TAAGTGCGTTTTTGATATTA+CGG | - | chr8_1:83042137-83042156 | None:intergenic | 25.0% |
| ! | AAATTCAAAACAAACATCGA+GGG | - | chr8_1:83042203-83042222 | None:intergenic | 25.0% |
| ! | AAAATTCAAAACAAACATCG+AGG | - | chr8_1:83042204-83042223 | None:intergenic | 25.0% |
| !!! | TTTTAAAAGAAAGGTTTACC+TGG | + | chr8_1:83042231-83042250 | Msa1220030:intron | 25.0% |
| ! | TTTGAGAAGGACAATATAAT+TGG | - | chr8_1:83042577-83042596 | None:intergenic | 25.0% |
| !! | ATTTAAAATCTCACTCACTT+TGG | - | chr8_1:83042818-83042837 | None:intergenic | 25.0% |
| ! | AAATTGTTAGCAAAGTCTAA+AGG | - | chr8_1:83042888-83042907 | None:intergenic | 25.0% |
| ! | AATGCAATTGTACACAATAA+AGG | + | chr8_1:83043020-83043039 | Msa1220030:intron | 25.0% |
| !!! | TTTGATTTTGATTATGAACG+TGG | + | chr8_1:83043113-83043132 | Msa1220030:intron | 25.0% |
| AGCTCTTATCTACAAATACA+TGG | + | chr8_1:83039055-83039074 | Msa1220030:CDS | 30.0% | |
| ! | TATGTATGCACTTGTTGATT+TGG | + | chr8_1:83039221-83039240 | Msa1220030:intron | 30.0% |
| AACTATTTACCAATGGGATT+GGG | + | chr8_1:83039266-83039285 | Msa1220030:CDS | 30.0% | |
| TTGTCTTGAAATGAGAAGTT+AGG | - | chr8_1:83039644-83039663 | None:intergenic | 30.0% | |
| TCAAATAGTCCAATCCAAAA+AGG | + | chr8_1:83039991-83040010 | Msa1220030:intron | 30.0% | |
| ! | GGTATTGTTGTTATCTTTGA+AGG | + | chr8_1:83040073-83040092 | Msa1220030:intron | 30.0% |
| AAACTTCTTATAGTTCCAGA+AGG | - | chr8_1:83040156-83040175 | None:intergenic | 30.0% | |
| AAGTTTATCAGCTTCTTCAA+TGG | + | chr8_1:83040170-83040189 | Msa1220030:CDS | 30.0% | |
| GAAGAAACATTCATGAAACA+TGG | + | chr8_1:83040354-83040373 | Msa1220030:intron | 30.0% | |
| AAACGATGAAAAATCTTCTG+AGG | - | chr8_1:83040390-83040409 | None:intergenic | 30.0% | |
| TTCATCGTTTCTTTGATGAA+TGG | + | chr8_1:83040400-83040419 | Msa1220030:intron | 30.0% | |
| TTTCCTCAAATTATCACCTA+TGG | - | chr8_1:83040621-83040640 | None:intergenic | 30.0% | |
| AGTGATTAGTGATTTCTCAT+TGG | + | chr8_1:83040908-83040927 | Msa1220030:intron | 30.0% | |
| !! | ATTTCTCATTGGCTTGAATT+TGG | + | chr8_1:83040919-83040938 | Msa1220030:intron | 30.0% |
| !! | GTCCCTTTTAATTGAATCTA+AGG | + | chr8_1:83040981-83041000 | Msa1220030:intron | 30.0% |
| AACAACACATGTACAATAGT+GGG | - | chr8_1:83041108-83041127 | None:intergenic | 30.0% | |
| !! | TAAAATTTTGGGTGAAGATG+CGG | + | chr8_1:83041551-83041570 | Msa1220030:intron | 30.0% |
| ! | TACTTTGATAGTCTCATAGT+GGG | - | chr8_1:83041690-83041709 | None:intergenic | 30.0% |
| ! | ATACTTTGATAGTCTCATAG+TGG | - | chr8_1:83041691-83041710 | None:intergenic | 30.0% |
| ! | AGTCCTTCTGAAAACATATT+AGG | + | chr8_1:83042031-83042050 | Msa1220030:intron | 30.0% |
| ! | GTCCTTCTGAAAACATATTA+GGG | + | chr8_1:83042032-83042051 | Msa1220030:intron | 30.0% |
| TAAAAAACTGTATTCTGACC+AGG | - | chr8_1:83042252-83042271 | None:intergenic | 30.0% | |
| GTCAAAAAAACACATGCATA+AGG | + | chr8_1:83042315-83042334 | Msa1220030:intron | 30.0% | |
| !! | TAAATACCGTGTGTTTTGTT+TGG | + | chr8_1:83042371-83042390 | Msa1220030:intron | 30.0% |
| !!! | AAATACCGTGTGTTTTGTTT+GGG | + | chr8_1:83042372-83042391 | Msa1220030:intron | 30.0% |
| ! | GATTTTGTGTATCATTGCAA+CGG | + | chr8_1:83042443-83042462 | Msa1220030:intron | 30.0% |
| GTAAAAAAATGCTCCTGTTT+AGG | - | chr8_1:83042601-83042620 | None:intergenic | 30.0% | |
| AAGATATCTAACGTTATGCA+TGG | - | chr8_1:83042648-83042667 | None:intergenic | 30.0% | |
| !! | GTGTTGATGTGTATTTTGTT+TGG | - | chr8_1:83042757-83042776 | None:intergenic | 30.0% |
| TTGTGTACAATTGCATTACA+TGG | - | chr8_1:83043017-83043036 | None:intergenic | 30.0% | |
| CAATGATGAATGGAAGAAAC+AGG | + | chr8_1:83038991-83039010 | Msa1220030:exon | 35.0% | |
| ATCTACAAATACATGGCTTC+TGG | + | chr8_1:83039062-83039081 | Msa1220030:CDS | 35.0% | |
| !! | TTGATAGTGAGTAGAAGATC+AGG | - | chr8_1:83039101-83039120 | None:intergenic | 35.0% |
| TGGATGGAACTATTTACCAA+TGG | + | chr8_1:83039259-83039278 | Msa1220030:CDS | 35.0% | |
| GGATGGAACTATTTACCAAT+GGG | + | chr8_1:83039260-83039279 | Msa1220030:CDS | 35.0% | |
| GAACTATTTACCAATGGGAT+TGG | + | chr8_1:83039265-83039284 | Msa1220030:CDS | 35.0% | |
| ! | ATTTTTCTTCCCAATCCCAT+TGG | - | chr8_1:83039278-83039297 | None:intergenic | 35.0% |
| GAAGAACAGATGGAAAGAAA+TGG | + | chr8_1:83039321-83039340 | Msa1220030:CDS | 35.0% | |
| CTTTCACAGTACTTTGAATC+TGG | - | chr8_1:83039368-83039387 | None:intergenic | 35.0% | |
| !! | CAGATTCAAAGTACTGTGAA+AGG | + | chr8_1:83039366-83039385 | Msa1220030:CDS | 35.0% |
| !! | GTTGTTTTCAAAACTTCCAC+AGG | - | chr8_1:83039425-83039444 | None:intergenic | 35.0% |
| !! | AAGCATAAGAAGAGTGTTGA+GGG | - | chr8_1:83039571-83039590 | None:intergenic | 35.0% |
| CCAGTATTGTCAAGAAACAA+GGG | - | chr8_1:83039674-83039693 | None:intergenic | 35.0% | |
| ACCAGTATTGTCAAGAAACA+AGG | - | chr8_1:83039675-83039694 | None:intergenic | 35.0% | |
| ! | AGTGTTGTTGTTATTGTGAG+AGG | - | chr8_1:83039702-83039721 | None:intergenic | 35.0% |
| ! | ATAACAACAACACTGATTGC+AGG | + | chr8_1:83039708-83039727 | Msa1220030:intron | 35.0% |
| AACATGGCCTAAATATGTGT+TGG | - | chr8_1:83039753-83039772 | None:intergenic | 35.0% | |
| ! | CATCATGAACCTTTTTGGAT+TGG | - | chr8_1:83040003-83040022 | None:intergenic | 35.0% |
| CAATCCAAAAAGGTTCATGA+TGG | + | chr8_1:83040001-83040020 | Msa1220030:intron | 35.0% | |
| ! | GTTGTTATCTTTGAAGGAAC+AGG | + | chr8_1:83040079-83040098 | Msa1220030:intron | 35.0% |
| TGAAGGAACAGGTATGTTTA+TGG | + | chr8_1:83040090-83040109 | Msa1220030:intron | 35.0% | |
| ! | GTATGTTTATGGACTGAAAG+AGG | + | chr8_1:83040101-83040120 | Msa1220030:CDS | 35.0% |
| CTTCTTCAATGGATGATTCA+TGG | + | chr8_1:83040181-83040200 | Msa1220030:CDS | 35.0% | |
| TCTCTGTTTAAAAGAGGAAG+AGG | - | chr8_1:83040232-83040251 | None:intergenic | 35.0% | |
| !! | GTAAGAGTACTCATTGTCAT+TGG | - | chr8_1:83040271-83040290 | None:intergenic | 35.0% |
| ATCATGAGAAGATGTAGGAA+TGG | - | chr8_1:83040496-83040515 | None:intergenic | 35.0% | |
| GTGAAATCATGAGAAGATGT+AGG | - | chr8_1:83040501-83040520 | None:intergenic | 35.0% | |
| !! | ATTATCGGTGTTGATGTGTT+TGG | - | chr8_1:83040669-83040688 | None:intergenic | 35.0% |
| !!! | CTTGAATTTGGTTTTGCAGA+TGG | + | chr8_1:83040931-83040950 | Msa1220030:intron | 35.0% |
| ! | GTACAATAGTGGGATAAAGT+GGG | - | chr8_1:83041098-83041117 | None:intergenic | 35.0% |
| ! | TGTACAATAGTGGGATAAAG+TGG | - | chr8_1:83041099-83041118 | None:intergenic | 35.0% |
| CAACAACACATGTACAATAG+TGG | - | chr8_1:83041109-83041128 | None:intergenic | 35.0% | |
| ! | TTGTACATGTGTTGTTGAAG+TGG | + | chr8_1:83041112-83041131 | Msa1220030:intron | 35.0% |
| !! | TTGTTTGTTTCTGCCAAACA+TGG | + | chr8_1:83041221-83041240 | Msa1220030:intron | 35.0% |
| CTGAAAACTGAAACCATGTT+TGG | - | chr8_1:83041237-83041256 | None:intergenic | 35.0% | |
| TTCAGACTCTACCAGTTATT+TGG | + | chr8_1:83041252-83041271 | Msa1220030:intron | 35.0% | |
| TGAAACCACATAAACAGACA+CGG | - | chr8_1:83041278-83041297 | None:intergenic | 35.0% | |
| GTATGTGATGAGTACGTTAT+TGG | + | chr8_1:83041325-83041344 | Msa1220030:intron | 35.0% | |
| ATTGGATGCTAGCATTATGA+TGG | + | chr8_1:83041343-83041362 | Msa1220030:intron | 35.0% | |
| AACAAACAAACAAAACCCCA+GGG | - | chr8_1:83041370-83041389 | None:intergenic | 35.0% | |
| AAACAAACAAACAAAACCCC+AGG | - | chr8_1:83041371-83041390 | None:intergenic | 35.0% | |
| !! | TACTTTGAAGTGACTACCAT+AGG | - | chr8_1:83041643-83041662 | None:intergenic | 35.0% |
| !! | GAGAGTTGATAACATGATTG+AGG | - | chr8_1:83041776-83041795 | None:intergenic | 35.0% |
| ! | GTCCCTAATATGTTTTCAGA+AGG | - | chr8_1:83042037-83042056 | None:intergenic | 35.0% |
| !! | GGACTAAAGTTGATAGTAAG+TGG | + | chr8_1:83042053-83042072 | Msa1220030:intron | 35.0% |
| TTTCTCCCAAACAAAACACA+CGG | - | chr8_1:83042380-83042399 | None:intergenic | 35.0% | |
| !! | GTGTATTTTGTTTGGCTGAA+TGG | - | chr8_1:83042749-83042768 | None:intergenic | 35.0% |
| ! | ACATCTTATTCCTCTCCTTT+TGG | - | chr8_1:83042782-83042801 | None:intergenic | 35.0% |
| AAAAGGAGAGGAATAAGATG+TGG | + | chr8_1:83042781-83042800 | Msa1220030:intron | 35.0% | |
| GAATAAGATGTGGTCAAAGT+GGG | + | chr8_1:83042791-83042810 | Msa1220030:intron | 35.0% | |
| ! | TAATTTGTATCCTCTGACTC+AGG | + | chr8_1:83042991-83043010 | Msa1220030:intron | 35.0% |
| CAGTGCATGCTTTAGTAATA+AGG | + | chr8_1:83043082-83043101 | Msa1220030:intron | 35.0% | |
| !!! | GATTTTGATTATGAACGTGG+TGG | + | chr8_1:83043116-83043135 | Msa1220030:intron | 35.0% |
| !!! | GACACAGTTGTTGGTAATTT+TGG | + | chr8_1:83043150-83043169 | Msa1220030:intron | 35.0% |
| AAGAGAAGAGAAGAGAAGAG+AGG | - | chr8_1:83038949-83038968 | None:intergenic | 40.0% | |
| ! | ATCCTTTTACTCCAACTCAG+TGG | + | chr8_1:83039015-83039034 | Msa1220030:CDS | 40.0% |
| ATAGTGAGTAGAAGATCAGG+AGG | - | chr8_1:83039098-83039117 | None:intergenic | 40.0% | |
| ! | TTACAGTGTTGAGACTGATG+AGG | - | chr8_1:83039155-83039174 | None:intergenic | 40.0% |
| !! | ATGCACTTGTTGATTTGGTG+TGG | + | chr8_1:83039226-83039245 | Msa1220030:intron | 40.0% |
| GAACAGATGGAAAGAAATGG+AGG | + | chr8_1:83039324-83039343 | Msa1220030:CDS | 40.0% | |
| AAGATTGTTGAAGTAGCAGC+AGG | - | chr8_1:83039464-83039483 | None:intergenic | 40.0% | |
| !! | AAGAAGAGTGTTGAGGGTAA+TGG | - | chr8_1:83039565-83039584 | None:intergenic | 40.0% |
| !! | GAAGCATAAGAAGAGTGTTG+AGG | - | chr8_1:83039572-83039591 | None:intergenic | 40.0% |
| AAATGAGAAGTTAGGCCTTG+AGG | - | chr8_1:83039636-83039655 | None:intergenic | 40.0% | |
| ! | CCCTTGTTTCTTGACAATAC+TGG | + | chr8_1:83039671-83039690 | Msa1220030:intron | 40.0% |
| AAGCTATCGTTGAGACTGAA+TGG | + | chr8_1:83039871-83039890 | Msa1220030:intron | 40.0% | |
| ! | AGCACCATCATGAACCTTTT+TGG | - | chr8_1:83040008-83040027 | None:intergenic | 40.0% |
| ! | TGTTTATGGACTGAAAGAGG+AGG | + | chr8_1:83040104-83040123 | Msa1220030:CDS | 40.0% |
| AAAAGAGGAAGAGGAGCTTA+TGG | - | chr8_1:83040223-83040242 | None:intergenic | 40.0% | |
| AAACAACCACAGCAAGATCA+AGG | + | chr8_1:83040312-83040331 | Msa1220030:CDS | 40.0% | |
| TAACAACCTTGATCTTGCTG+TGG | - | chr8_1:83040321-83040340 | None:intergenic | 40.0% | |
| GATCAAGGTTGTTACATCTC+AGG | + | chr8_1:83040327-83040346 | Msa1220030:CDS | 40.0% | |
| !!! | CATGAGTTTCTGCTGCTTTT+GGG | - | chr8_1:83040429-83040448 | None:intergenic | 40.0% |
| CAGAAACTCATGGCTTGATT+TGG | + | chr8_1:83040437-83040456 | Msa1220030:intron | 40.0% | |
| AATGGAGATTGAAAGCTGAG+TGG | - | chr8_1:83040478-83040497 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCACAAACCAACG+AGG | + | chr8_1:83040525-83040544 | Msa1220030:intron | 40.0% |
| AGAGAAACCATTTACCTCGT+TGG | - | chr8_1:83040542-83040561 | None:intergenic | 40.0% | |
| TCGCCATAGGTGATAATTTG+AGG | + | chr8_1:83040615-83040634 | Msa1220030:intron | 40.0% | |
| TGACTAGAGCATGTTGACAA+TGG | - | chr8_1:83040763-83040782 | None:intergenic | 40.0% | |
| ! | TTTTGCAGATGGTTGAGCTT+GGG | + | chr8_1:83040942-83040961 | Msa1220030:intron | 40.0% |
| TTGAGCTTGGGTTTCAATGA+TGG | + | chr8_1:83040954-83040973 | Msa1220030:intron | 40.0% | |
| !! | CTTGGGTTTCAATGATGGAT+GGG | + | chr8_1:83040959-83040978 | Msa1220030:intron | 40.0% |
| GGATATGATATGTGTCTCCA+TGG | + | chr8_1:83041133-83041152 | Msa1220030:intron | 40.0% | |
| TATGATATGTGTCTCCATGG+AGG | + | chr8_1:83041136-83041155 | Msa1220030:intron | 40.0% | |
| ATGATATGTGTCTCCATGGA+GGG | + | chr8_1:83041137-83041156 | Msa1220030:intron | 40.0% | |
| ACAAACAAACAAAACCCCAG+GGG | - | chr8_1:83041369-83041388 | None:intergenic | 40.0% | |
| ! | TACCTAGCCTGTACACTTTT+GGG | - | chr8_1:83041413-83041432 | None:intergenic | 40.0% |
| TTATCACCAAAAGGTCCCTT+TGG | - | chr8_1:83041872-83041891 | None:intergenic | 40.0% | |
| AATGTTAGAGACTGAGACGA+TGG | - | chr8_1:83041942-83041961 | None:intergenic | 40.0% | |
| ! | GTGCGTTTTTGATATTACGG+CGG | - | chr8_1:83042134-83042153 | None:intergenic | 40.0% |
| TTGTTGTCGTGAAGCATAGT+TGG | - | chr8_1:83042162-83042181 | None:intergenic | 40.0% | |
| !! | ACAAACATCGAGGGTATTGA+GGG | - | chr8_1:83042194-83042213 | None:intergenic | 40.0% |
| !! | AACAAACATCGAGGGTATTG+AGG | - | chr8_1:83042195-83042214 | None:intergenic | 40.0% |
| GTTTCAGTCTCAGAGATTTG+TGG | - | chr8_1:83042524-83042543 | None:intergenic | 40.0% | |
| GTCCTTCTCAAAACCTAAAC+AGG | + | chr8_1:83042585-83042604 | Msa1220030:intron | 40.0% | |
| !!! | CTCCTGTTTAGGTTTTGAGA+AGG | - | chr8_1:83042590-83042609 | None:intergenic | 40.0% |
| TACACATCAACACAGCCAAA+AGG | + | chr8_1:83042764-83042783 | Msa1220030:intron | 40.0% | |
| GGAATAAGATGTGGTCAAAG+TGG | + | chr8_1:83042790-83042809 | Msa1220030:intron | 40.0% | |
| ! | TGCCACTGAGTTGGAGTAAA+AGG | - | chr8_1:83039020-83039039 | None:intergenic | 45.0% |
| GAGTAGAAGATCAGGAGGAA+TGG | - | chr8_1:83039093-83039112 | None:intergenic | 45.0% | |
| AGAAAAATAGACCCAGAGCC+AGG | + | chr8_1:83039290-83039309 | Msa1220030:CDS | 45.0% | |
| GAAAAATAGACCCAGAGCCA+GGG | + | chr8_1:83039291-83039310 | Msa1220030:CDS | 45.0% | |
| ! | TGTGAAAGGCACATGCATAG+AGG | + | chr8_1:83039380-83039399 | Msa1220030:CDS | 45.0% |
| ! | GTGAAAGGCACATGCATAGA+GGG | + | chr8_1:83039381-83039400 | Msa1220030:CDS | 45.0% |
| AAACCGTTCAAGAAAGCCTG+TGG | + | chr8_1:83039406-83039425 | Msa1220030:CDS | 45.0% | |
| CTTCCACAGGCTTTCTTGAA+CGG | - | chr8_1:83039412-83039431 | None:intergenic | 45.0% | |
| GAGGAAAGGGTGGTTAAGAT+GGG | - | chr8_1:83039597-83039616 | None:intergenic | 45.0% | |
| AGAGGAAAGGGTGGTTAAGA+TGG | - | chr8_1:83039598-83039617 | None:intergenic | 45.0% | |
| GAGGGTTATGGTAGAGGAAA+GGG | - | chr8_1:83039610-83039629 | None:intergenic | 45.0% | |
| ! | TTATGGACTGAAAGAGGAGG+TGG | + | chr8_1:83040107-83040126 | Msa1220030:CDS | 45.0% |
| GCTTTCTTCACTGAACCTTC+TGG | + | chr8_1:83040138-83040157 | Msa1220030:CDS | 45.0% | |
| GAAGAGGAGCTTATGGTAAG+TGG | - | chr8_1:83040216-83040235 | None:intergenic | 45.0% | |
| !!! | CCATGAGTTTCTGCTGCTTT+TGG | - | chr8_1:83040430-83040449 | None:intergenic | 45.0% |
| CCAAAAGCAGCAGAAACTCA+TGG | + | chr8_1:83040427-83040446 | Msa1220030:intron | 45.0% | |
| !! | CCATTTACCTCGTTGGTTTG+TGG | - | chr8_1:83040535-83040554 | None:intergenic | 45.0% |
| CCACAAACCAACGAGGTAAA+TGG | + | chr8_1:83040532-83040551 | Msa1220030:intron | 45.0% | |
| TGCTTCAAAGCTATGAGCCA+CGG | - | chr8_1:83040802-83040821 | None:intergenic | 45.0% | |
| ! | GTTTTGCAGATGGTTGAGCT+TGG | + | chr8_1:83040941-83040960 | Msa1220030:intron | 45.0% |
| ! | GCTTGGGTTTCAATGATGGA+TGG | + | chr8_1:83040958-83040977 | Msa1220030:intron | 45.0% |
| CAGCACACACAACTACACAT+TGG | - | chr8_1:83041165-83041184 | None:intergenic | 45.0% | |
| GTTGTGTGTGCTGTGTTGTA+TGG | + | chr8_1:83041172-83041191 | Msa1220030:intron | 45.0% | |
| AACAGACACGGCCAAATAAC+TGG | - | chr8_1:83041266-83041285 | None:intergenic | 45.0% | |
| TTTGGCCGTGTCTGTTTATG+TGG | + | chr8_1:83041270-83041289 | Msa1220030:intron | 45.0% | |
| !! | CTGTACACTTTTGGGAGTTG+AGG | - | chr8_1:83041405-83041424 | None:intergenic | 45.0% |
| ! | CTCAACTCCCAAAAGTGTAC+AGG | + | chr8_1:83041403-83041422 | Msa1220030:intron | 45.0% |
| ! | GTACCTAGCCTGTACACTTT+TGG | - | chr8_1:83041414-83041433 | None:intergenic | 45.0% |
| !! | GCACATGGTGCCGATAAAAT+AGG | - | chr8_1:83041838-83041857 | None:intergenic | 45.0% |
| ATCAACACAGCCAAAAGGAG+AGG | + | chr8_1:83042769-83042788 | Msa1220030:intron | 45.0% | |
| AATTGGACAGTCCAAAGACG+TGG | - | chr8_1:83043056-83043075 | None:intergenic | 45.0% | |
| AGCATGCACTGTTGCACAAT+TGG | - | chr8_1:83043073-83043092 | None:intergenic | 45.0% | |
| !!! | ATAAACATTTTAATAAAAAA+AGG | - | chr8_1:83040037-83040056 | None:intergenic | 5.0% |
| !!! | AATTATTTTATACATTTTAT+TGG | + | chr8_1:83041810-83041829 | Msa1220030:intron | 5.0% |
| TCAAGCTCTTGCCACTGAGT+TGG | - | chr8_1:83039029-83039048 | None:intergenic | 50.0% | |
| ! | TTTGGTGTGGTGCATGCAGT+TGG | + | chr8_1:83039239-83039258 | Msa1220030:intron | 50.0% |
| GGTTATGGTAGAGGAAAGGG+TGG | - | chr8_1:83039607-83039626 | None:intergenic | 50.0% | |
| GGAGGGTTATGGTAGAGGAA+AGG | - | chr8_1:83039611-83039630 | None:intergenic | 50.0% | |
| AGGATGGAGGGTTATGGTAG+AGG | - | chr8_1:83039616-83039635 | None:intergenic | 50.0% | |
| ACCATAACCCTCCATCCTCA+AGG | + | chr8_1:83039618-83039637 | Msa1220030:CDS | 50.0% | |
| AGTTAGGCCTTGAGGATGGA+GGG | - | chr8_1:83039628-83039647 | None:intergenic | 50.0% | |
| AAGTTAGGCCTTGAGGATGG+AGG | - | chr8_1:83039629-83039648 | None:intergenic | 50.0% | |
| GAGAAGTTAGGCCTTGAGGA+TGG | - | chr8_1:83039632-83039651 | None:intergenic | 50.0% | |
| !!! | GAGTTTCTGCTGCTTTTGGG+TGG | - | chr8_1:83040426-83040445 | None:intergenic | 50.0% |
| GGAGATTGAAAGCTGAGTGG+TGG | - | chr8_1:83040475-83040494 | None:intergenic | 50.0% | |
| CTACACATTGGATCCCTCCA+TGG | - | chr8_1:83041153-83041172 | None:intergenic | 50.0% | |
| CTAGCATTATGATGGCCCCT+GGG | + | chr8_1:83041351-83041370 | Msa1220030:intron | 50.0% | |
| TAGCATTATGATGGCCCCTG+GGG | + | chr8_1:83041352-83041371 | Msa1220030:intron | 50.0% | |
| ! | CTCCCAAAAGTGTACAGGCT+AGG | + | chr8_1:83041408-83041427 | Msa1220030:intron | 50.0% |
| TCGTGCACAACACATGCGTA+AGG | + | chr8_1:83042287-83042306 | Msa1220030:intron | 50.0% | |
| CATTACATGGCCTGAGTCAG+AGG | - | chr8_1:83043004-83043023 | None:intergenic | 50.0% | |
| GCAAGCTAGAACCACGTCTT+TGG | + | chr8_1:83043042-83043061 | Msa1220030:intron | 50.0% | |
| ! | ATTATGAACGTGGTGGTGCG+TGG | + | chr8_1:83043123-83043142 | Msa1220030:intron | 50.0% |
| ! | TTATGAACGTGGTGGTGCGT+GGG | + | chr8_1:83043124-83043143 | Msa1220030:intron | 50.0% |
| GTGTGGTGCATGCAGTTGGA+TGG | + | chr8_1:83039243-83039262 | Msa1220030:intron | 55.0% | |
| AAATAGACCCAGAGCCAGGG+AGG | + | chr8_1:83039294-83039313 | Msa1220030:CDS | 55.0% | |
| TCTGTTCTTCTGCACCTCCC+TGG | - | chr8_1:83039311-83039330 | None:intergenic | 55.0% | |
| ! | GGGAGGTGCAGAAGAACAGA+TGG | + | chr8_1:83039311-83039330 | Msa1220030:CDS | 55.0% |
| GCCTTGAGGATGGAGGGTTA+TGG | - | chr8_1:83039622-83039641 | None:intergenic | 55.0% | |
| CGACACTGACACATCGCCAT+AGG | + | chr8_1:83040602-83040621 | Msa1220030:intron | 55.0% | |
| GCTCTAGTCAGTGTTGTGCC+TGG | + | chr8_1:83040773-83040792 | Msa1220030:intron | 55.0% | |
| GCTAGCATTATGATGGCCCC+TGG | + | chr8_1:83041350-83041369 | Msa1220030:intron | 55.0% | |
| TGGGTGAAGATGCGGTGTGT+TGG | + | chr8_1:83041559-83041578 | Msa1220030:intron | 55.0% | |
| TTGGCAGGTGAAGTCGCACA+TGG | - | chr8_1:83041853-83041872 | None:intergenic | 55.0% | |
| TGTGCGACTTCACCTGCCAA+AGG | + | chr8_1:83041853-83041872 | Msa1220030:intron | 55.0% | |
| GTGCGACTTCACCTGCCAAA+GGG | + | chr8_1:83041854-83041873 | Msa1220030:intron | 55.0% | |
| ! | CACCTGCCAAAGGGACCTTT+TGG | + | chr8_1:83041863-83041882 | Msa1220030:intron | 55.0% |
| CACCAAAAGGTCCCTTTGGC+AGG | - | chr8_1:83041868-83041887 | None:intergenic | 55.0% | |
| CGTGGGACAGACACAGTTGT+TGG | + | chr8_1:83043141-83043160 | Msa1220030:intron | 55.0% | |
| ! | TTCTGCACCTCCCTGGCTCT+GGG | - | chr8_1:83039304-83039323 | None:intergenic | 60.0% |
| AGTGTTGTGCCTGGTGTCCG+TGG | + | chr8_1:83040782-83040801 | Msa1220030:intron | 60.0% | |
| AGCTATGAGCCACGGACACC+AGG | - | chr8_1:83040794-83040813 | None:intergenic | 60.0% | |
| CTTCTGCACCTCCCTGGCTC+TGG | - | chr8_1:83039305-83039324 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 83038939 | 83043228 | 83038939 | ID=Msa1220030;Name=Msa1220030 |
| chr8_1 | mRNA | 83038939 | 83043228 | 83038939 | ID=Msa1220030-mRNA-1;Parent=Msa1220030;Name=Msa1220030-mRNA-1;_AED=0.23;_eAED=0.23;_QI=54|0.33|0.25|0.75|1|1|4|0|286 |
| chr8_1 | exon | 83038939 | 83039170 | 83038939 | ID=Msa1220030-mRNA-1:exon:29721;Parent=Msa1220030-mRNA-1 |
| chr8_1 | exon | 83039258 | 83039675 | 83039258 | ID=Msa1220030-mRNA-1:exon:29722;Parent=Msa1220030-mRNA-1 |
| chr8_1 | exon | 83040095 | 83040348 | 83040095 | ID=Msa1220030-mRNA-1:exon:29723;Parent=Msa1220030-mRNA-1 |
| chr8_1 | exon | 83043218 | 83043228 | 83043218 | ID=Msa1220030-mRNA-1:exon:29724;Parent=Msa1220030-mRNA-1 |
| chr8_1 | five_prime_UTR | 83038939 | 83038992 | 83038939 | ID=Msa1220030-mRNA-1:five_prime_utr;Parent=Msa1220030-mRNA-1 |
| chr8_1 | CDS | 83038993 | 83039170 | 83038993 | ID=Msa1220030-mRNA-1:cds;Parent=Msa1220030-mRNA-1 |
| chr8_1 | CDS | 83039258 | 83039675 | 83039258 | ID=Msa1220030-mRNA-1:cds;Parent=Msa1220030-mRNA-1 |
| chr8_1 | CDS | 83040095 | 83040348 | 83040095 | ID=Msa1220030-mRNA-1:cds;Parent=Msa1220030-mRNA-1 |
| chr8_1 | CDS | 83043218 | 83043228 | 83043218 | ID=Msa1220030-mRNA-1:cds;Parent=Msa1220030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
