AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249200 MtrunA17_Chr8g0364791 86.522 460 45 3 1 459 1 444 0.0 796
Msa1249200 MtrunA17_Chr8g0384201 73.361 488 90 11 1 453 1 483 0.0 674
Msa1249200 MtrunA17_Chr3g0130101 64.255 235 78 3 1 229 1 235 4.90e-105 316
Msa1249200 MtrunA17_Chr1g0201021 54.857 175 79 0 7 181 20 194 4.95e-65 219
Msa1249200 MtrunA17_Chr1g0197361 55.233 172 71 3 8 176 10 178 7.41e-65 219
Msa1249200 MtrunA17_Chr3g0092671 52.571 175 77 3 7 178 6 177 9.75e-63 212
Msa1249200 MtrunA17_Chr1g0197351 49.558 226 98 6 6 225 42 257 9.72e-61 205
Msa1249200 MtrunA17_Chr6g0481091 53.595 153 71 0 6 158 6 158 2.28e-55 184
Msa1249200 MtrunA17_Chr2g0309891 52.866 157 73 1 1 156 1 157 8.79e-54 183
Msa1249200 MtrunA17_Chr5g0433781 50.888 169 82 1 1 168 1 169 6.71e-53 188
Msa1249200 MtrunA17_Chr3g0109821 50.888 169 81 2 1 167 1 169 3.28e-52 186
Msa1249200 MtrunA17_Chr5g0428991 49.045 157 80 0 1 157 20 176 1.79e-50 181
Msa1249200 MtrunA17_Chr3g0128111 50.000 152 72 2 7 156 43 192 2.53e-49 168
Msa1249200 MtrunA17_Chr3g0128151 49.359 156 79 0 1 156 17 172 1.19e-48 175
Msa1249200 MtrunA17_Chr5g0400461 45.405 185 91 2 1 178 1 182 7.96e-48 167
Msa1249200 MtrunA17_Chr4g0056541 42.453 212 112 6 8 215 9 214 9.18e-48 168
Msa1249200 MtrunA17_Chr4g0054791 47.273 165 84 1 1 162 1 165 2.08e-47 166
Msa1249200 MtrunA17_Chr1g0200561 49.080 163 74 4 8 166 21 178 1.22e-46 164
Msa1249200 MtrunA17_Chr2g0309331 46.471 170 83 4 8 175 12 175 1.30e-46 164
Msa1249200 MtrunA17_Chr4g0060931 47.170 159 80 2 6 162 17 173 4.03e-46 163
Msa1249200 MtrunA17_Chr3g0091921 47.799 159 79 2 6 162 16 172 1.20e-45 160
Msa1249200 MtrunA17_Chr8g0372121 47.682 151 76 2 8 157 8 156 1.37e-45 160
Msa1249200 MtrunA17_Chr4g0018391 41.111 180 94 5 8 183 9 180 3.03e-45 160
Msa1249200 MtrunA17_Chr4g0017921 50.323 155 65 4 8 157 10 157 4.46e-45 160
Msa1249200 MtrunA17_Chr7g0217721 42.541 181 86 3 5 169 18 196 1.13e-44 159
Msa1249200 MtrunA17_Chr5g0398971 40.816 196 101 6 8 196 9 196 1.13e-44 159
Msa1249200 MtrunA17_Chr6g0484441 47.682 151 75 2 6 156 5 151 1.43e-44 158
Msa1249200 MtrunA17_Chr6g0453451 44.186 172 88 3 5 172 19 186 1.68e-44 158
Msa1249200 MtrunA17_Chr4g0076731 45.513 156 76 4 6 158 54 203 3.16e-44 160
Msa1249200 MtrunA17_Chr4g0038751 52.288 153 63 3 7 156 16 161 3.66e-44 156
Msa1249200 MtrunA17_Chr2g0318081 45.513 156 83 1 1 156 11 164 1.66e-43 156
Msa1249200 MtrunA17_Chr5g0405211 46.104 154 74 3 8 157 10 158 2.97e-43 155
Msa1249200 MtrunA17_Chr2g0316971 48.428 159 76 3 6 160 23 179 3.52e-43 156
Msa1249200 MtrunA17_Chr6g0453131 45.963 161 75 5 6 156 15 173 7.50e-43 155
Msa1249200 MtrunA17_Chr8g0361731 43.210 162 79 4 6 156 14 173 1.28e-42 155
Msa1249200 MtrunA17_Chr3g0124761 45.860 157 79 3 5 158 6 159 1.97e-42 151
Msa1249200 MtrunA17_Chr8g0346001 42.945 163 77 3 8 157 17 176 2.75e-42 155
Msa1249200 MtrunA17_Chr7g0253011 47.134 157 75 3 6 156 17 171 3.35e-42 154
Msa1249200 MtrunA17_Chr6g0461661 46.154 156 76 4 6 156 18 170 1.34e-41 152
Msa1249200 MtrunA17_Chr3g0139331 44.654 159 82 3 6 162 11 165 1.75e-41 150
Msa1249200 MtrunA17_Chr5g0417001 43.478 161 79 4 6 156 14 172 3.23e-41 151
Msa1249200 MtrunA17_Chr7g0217711 48.201 139 70 1 5 143 18 154 5.53e-41 144
Msa1249200 MtrunA17_Chr7g0252971 37.441 211 105 6 6 201 8 206 6.52e-41 149
Msa1249200 MtrunA17_Chr2g0318101 40.625 192 94 5 4 182 13 197 4.33e-40 147
Msa1249200 MtrunA17_Chr8g0359921 45.752 153 79 2 6 156 14 164 7.92e-40 145
Msa1249200 MtrunA17_Chr4g0042561 43.558 163 86 3 2 160 5 165 8.31e-40 144
Msa1249200 MtrunA17_Chr3g0130731 42.675 157 84 3 5 158 6 159 1.53e-39 144
Msa1249200 MtrunA17_Chr8g0384721 42.405 158 84 3 5 158 6 160 3.58e-39 143
Msa1249200 MtrunA17_Chr8g0345691 45.946 148 71 5 9 153 15 156 3.44e-38 143
Msa1249200 MtrunA17_Chr7g0214071 42.771 166 82 4 5 166 14 170 6.11e-38 139
Msa1249200 MtrunA17_Chr5g0417791 42.038 157 85 2 5 157 2 156 6.77e-38 139
Msa1249200 MtrunA17_Chr2g0312321 43.396 159 81 4 1 156 6 158 9.73e-38 139
Msa1249200 MtrunA17_Chr5g0442771 41.718 163 81 4 6 156 18 178 1.07e-37 139
Msa1249200 MtrunA17_Chr1g0147421 44.805 154 78 4 6 156 27 176 1.43e-37 140
Msa1249200 MtrunA17_Chr7g0263931 40.476 168 91 4 5 166 10 174 2.36e-37 139
Msa1249200 MtrunA17_Chr4g0047841 39.326 178 81 4 4 156 13 188 2.56e-37 139
Msa1249200 MtrunA17_Chr2g0311651 41.212 165 81 3 7 156 23 186 3.71e-37 138
Msa1249200 MtrunA17_Chr2g0326361 43.226 155 80 4 8 156 16 168 4.51e-37 138
Msa1249200 MtrunA17_Chr1g0183741 33.750 240 137 6 6 241 10 231 5.56e-37 137
Msa1249200 MtrunA17_Chr2g0311661 48.855 131 62 2 7 133 22 151 1.90e-36 135
Msa1249200 MtrunA17_Chr3g0144271 46.715 137 68 3 6 139 23 157 5.65e-36 137
Msa1249200 MtrunA17_Chr8g0345671 43.919 148 74 5 9 153 14 155 7.20e-36 137
Msa1249200 MtrunA17_Chr7g0261411 41.447 152 81 3 6 155 10 155 2.58e-35 132
Msa1249200 MtrunA17_Chr2g0321741 44.531 128 63 2 26 153 12 131 2.07e-34 132
Msa1249200 MtrunA17_Chr8g0345711 46.457 127 64 3 9 132 15 140 9.29e-34 125
Msa1249200 MtrunA17_Chr8g0385991 38.506 174 92 4 2 168 10 175 7.30e-33 124
Msa1249200 MtrunA17_Chr3g0131911 37.572 173 94 3 2 164 10 178 7.13e-32 122
Msa1249200 MtrunA17_Chr8g0345721 39.506 162 62 6 9 135 38 198 2.45e-31 119
Msa1249200 MtrunA17_Chr8g0345731 40.260 154 78 5 9 156 27 172 5.62e-31 117
Msa1249200 MtrunA17_Chr8g0345741 47.009 117 58 3 19 132 4 119 1.96e-30 115
Msa1249200 MtrunA17_Chr2g0321631 38.365 159 90 5 8 158 6 164 1.53e-28 113
Msa1249200 MtrunA17_Chr3g0113001 41.525 118 62 2 60 172 17 132 1.65e-28 114
Msa1249200 MtrunA17_Chr7g0266701 34.591 159 94 5 8 156 6 164 2.46e-26 107
Msa1249200 MtrunA17_Chr4g0026141 36.076 158 94 4 8 158 7 164 1.21e-25 105
Msa1249200 MtrunA17_Chr8g0345701 39.716 141 65 5 9 132 10 147 1.57e-25 102
Msa1249200 MtrunA17_Chr3g0113031 42.308 104 53 3 72 169 4 106 2.99e-25 104
Msa1249200 MtrunA17_Chr4g0050701 37.500 160 82 5 6 157 11 160 4.98e-25 101
Msa1249200 MtrunA17_Chr7g0243371 48.718 78 36 2 60 133 14 91 1.41e-19 84.3
Msa1249200 MtrunA17_Chr8g0384351 33.537 164 81 7 5 165 9 147 1.90e-18 83.2
Msa1249200 MtrunA17_Chr3g0130321 32.768 177 96 7 5 167 6 173 1.48e-15 75.5
Msa1249200 MtrunA17_Chr7g0251651 29.688 128 86 3 5 131 17 141 2.02e-13 68.9
Msa1249200 MtrunA17_Chr4g0040541 29.885 174 98 8 3 159 45 211 1.86e-11 64.7
Msa1249200 MtrunA17_Chr2g0282871 28.736 174 99 7 3 159 50 215 3.76e-11 63.9
Msa1249200 MtrunA17_Chr7g0251661 26.846 149 102 4 9 153 13 158 3.81e-11 61.2
Msa1249200 MtrunA17_Chr1g0168571 30.263 152 94 7 12 156 11 157 7.88e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249200 AT5G09330.5 52.157 255 108 3 1 243 1 253 3.72e-87 275
Msa1249200 AT5G09330.2 52.157 255 108 3 1 243 1 253 3.72e-87 275
Msa1249200 AT5G09330.4 52.157 255 108 3 1 243 1 253 3.72e-87 275
Msa1249200 AT5G09330.3 52.157 255 108 3 1 243 1 253 3.72e-87 275
Msa1249200 AT5G09330.1 52.157 255 108 3 1 243 1 253 3.72e-87 275
Msa1249200 AT5G64060.1 54.741 232 95 2 1 228 1 226 5.10e-82 257
Msa1249200 AT5G04410.1 57.303 178 76 0 2 179 5 182 9.75e-74 242
Msa1249200 AT3G10500.1 57.059 170 73 0 2 171 5 174 1.76e-69 231
Msa1249200 AT3G10490.1 55.682 176 76 2 6 180 27 201 1.74e-67 216
Msa1249200 AT3G10480.1 56.897 174 73 2 6 178 27 199 8.72e-67 221
Msa1249200 AT3G10480.2 56.069 173 75 1 6 178 27 198 1.55e-66 220
Msa1249200 AT3G10490.2 55.682 176 76 2 6 180 27 201 1.73e-66 220
Msa1249200 AT3G10480.3 47.826 207 73 3 6 178 27 232 5.55e-60 205
Msa1249200 AT1G34190.1 50.000 174 87 0 7 180 17 190 9.05e-59 202
Msa1249200 AT1G34180.3 47.826 184 90 1 7 184 17 200 1.01e-58 199
Msa1249200 AT1G34180.1 47.826 184 90 1 7 184 17 200 6.74e-58 200
Msa1249200 AT3G17730.1 54.430 158 72 0 1 158 1 158 1.60e-56 187
Msa1249200 AT1G34180.4 44.898 196 90 2 7 184 17 212 3.17e-55 191
Msa1249200 AT1G34180.2 44.898 196 90 2 7 184 17 212 1.90e-54 191
Msa1249200 AT1G65910.1 50.299 167 83 0 1 167 1 167 6.26e-54 191
Msa1249200 AT3G49530.2 45.274 201 95 3 1 200 8 194 1.72e-53 185
Msa1249200 AT3G49530.1 45.274 201 95 3 1 200 8 194 7.68e-53 184
Msa1249200 AT1G33060.1 50.641 156 77 0 1 156 19 174 3.87e-52 186
Msa1249200 AT1G33060.2 50.641 156 77 0 1 156 19 174 3.92e-52 186
Msa1249200 AT5G24590.2 50.633 158 77 1 1 157 8 165 5.05e-52 182
Msa1249200 AT2G27300.1 50.980 153 67 2 1 153 9 153 2.66e-51 177
Msa1249200 AT3G03200.1 52.866 157 73 1 1 156 1 157 1.53e-49 176
Msa1249200 AT5G46590.1 52.597 154 69 3 6 156 6 158 4.55e-49 169
Msa1249200 AT4G17980.1 50.968 155 72 2 6 156 6 160 1.39e-48 167
Msa1249200 AT5G17260.1 50.318 157 77 1 1 156 1 157 2.25e-48 172
Msa1249200 AT4G17980.2 50.000 160 76 2 1 156 1 160 2.98e-48 167
Msa1249200 AT5G22290.1 49.351 154 69 3 1 153 16 161 1.07e-47 167
Msa1249200 AT5G61430.1 48.428 159 78 2 6 162 16 172 1.46e-47 167
Msa1249200 AT4G35580.3 46.795 156 83 0 1 156 4 159 1.70e-47 171
Msa1249200 AT4G35580.1 46.795 156 83 0 1 156 4 159 1.76e-47 171
Msa1249200 AT4G35580.2 46.795 156 83 0 1 156 4 159 1.84e-47 171
Msa1249200 AT5G46590.2 55.556 135 59 1 6 139 6 140 2.66e-47 164
Msa1249200 AT1G54330.1 49.080 163 80 1 1 163 1 160 6.28e-47 164
Msa1249200 AT3G44290.2 47.368 152 72 2 2 153 10 153 6.57e-47 162
Msa1249200 AT4G10350.1 48.701 154 72 2 8 157 11 161 1.00e-46 165
Msa1249200 AT1G12260.2 42.077 183 97 4 8 187 9 185 1.18e-46 165
Msa1249200 AT1G12260.1 42.077 183 97 4 8 187 9 185 1.36e-46 166
Msa1249200 AT1G62700.1 38.462 221 114 7 8 222 9 213 1.90e-46 166
Msa1249200 AT1G62700.2 38.462 221 114 7 8 222 9 213 1.90e-46 166
Msa1249200 AT1G33280.1 48.701 154 69 3 8 157 10 157 4.30e-46 162
Msa1249200 AT1G71930.2 46.203 158 78 3 8 162 11 164 4.73e-46 162
Msa1249200 AT1G71930.1 46.203 158 78 3 8 162 11 164 4.73e-46 162
Msa1249200 AT5G39610.1 49.057 159 77 2 6 162 20 176 5.34e-46 161
Msa1249200 AT3G44290.1 47.368 152 72 2 2 153 10 153 6.28e-46 162
Msa1249200 AT1G32870.1 49.405 168 81 2 6 171 10 175 7.91e-45 164
Msa1249200 AT1G32870.2 49.405 168 81 2 6 171 10 175 8.82e-45 164
Msa1249200 AT1G32510.1 45.283 159 79 2 6 156 6 164 1.08e-44 158
Msa1249200 AT5G07680.2 46.875 160 79 3 6 162 3 159 1.19e-44 159
Msa1249200 AT5G07680.1 46.875 160 79 3 6 162 17 173 1.63e-44 159
Msa1249200 AT1G32870.3 49.405 168 81 2 6 171 46 211 2.16e-44 164
Msa1249200 AT4G27410.2 36.325 234 146 2 1 233 9 240 6.23e-44 156
Msa1249200 AT4G36160.1 44.000 175 80 5 8 177 12 173 9.01e-44 158
Msa1249200 AT4G36160.3 44.000 175 80 5 8 177 12 173 9.01e-44 158
Msa1249200 AT4G36160.2 44.000 175 80 5 8 177 16 177 9.05e-44 158
Msa1249200 AT2G18060.3 42.857 175 81 5 8 177 11 171 1.38e-43 157
Msa1249200 AT2G18060.1 42.857 175 81 5 8 177 11 171 1.38e-43 157
Msa1249200 AT1G01720.1 42.553 188 97 4 5 184 6 190 1.53e-43 155
Msa1249200 AT2G24430.2 47.712 153 75 3 6 156 16 165 2.43e-43 155
Msa1249200 AT2G24430.1 47.712 153 75 3 6 156 16 165 2.43e-43 155
Msa1249200 AT2G02450.1 44.805 154 80 3 6 158 51 200 2.67e-43 157
Msa1249200 AT3G12977.1 44.099 161 87 2 1 160 13 171 2.86e-43 154
Msa1249200 AT5G62380.2 45.283 159 80 3 2 157 3 157 3.63e-43 155
Msa1249200 AT5G62380.1 45.283 159 80 3 2 157 3 157 3.63e-43 155
Msa1249200 AT2G02450.2 44.805 154 80 3 6 158 51 200 4.69e-43 157
Msa1249200 AT3G04060.1 46.497 157 79 3 6 159 20 174 7.07e-43 154
Msa1249200 AT5G18270.2 48.428 159 73 4 6 159 21 175 8.10e-43 154
Msa1249200 AT3G29035.1 46.108 167 86 2 6 170 24 188 8.42e-43 154
Msa1249200 AT2G43000.1 47.020 151 77 2 7 156 19 167 9.66e-43 152
Msa1249200 AT5G18270.1 47.799 159 74 4 6 159 21 175 9.87e-43 154
Msa1249200 AT3G18400.1 45.000 160 79 3 6 162 5 158 1.00e-42 153
Msa1249200 AT1G79580.3 47.368 152 75 3 8 157 19 167 1.72e-42 154
Msa1249200 AT1G79580.5 47.368 152 75 3 8 157 19 167 1.72e-42 154
Msa1249200 AT1G79580.4 47.368 152 75 3 8 157 19 167 1.72e-42 154
Msa1249200 AT1G79580.2 47.368 152 75 3 8 157 19 167 1.72e-42 154
Msa1249200 AT1G79580.1 47.368 152 75 3 8 157 19 167 1.72e-42 154
Msa1249200 AT5G66300.1 43.636 165 89 3 8 170 14 176 3.23e-42 151
Msa1249200 AT5G08790.1 44.304 158 80 3 6 158 7 161 7.97e-42 150
Msa1249200 AT4G27410.3 34.940 249 146 3 1 233 9 257 8.11e-42 151
Msa1249200 AT1G26870.1 45.062 162 76 4 6 156 16 175 8.20e-42 154
Msa1249200 AT1G69490.1 41.398 186 101 4 6 187 9 190 1.73e-41 149
Msa1249200 AT5G53950.1 49.359 156 71 4 6 156 17 169 2.33e-41 151
Msa1249200 AT1G76420.1 46.452 155 78 3 6 158 22 173 2.83e-41 150
Msa1249200 AT3G15500.1 43.949 157 86 1 1 157 9 163 2.86e-41 150
Msa1249200 AT5G39820.1 41.379 174 77 4 6 156 20 191 3.54e-41 150
Msa1249200 AT2G17040.1 45.752 153 73 3 7 156 7 152 3.65e-41 148
Msa1249200 AT1G52890.1 43.949 157 86 1 6 162 14 168 3.71e-41 149
Msa1249200 AT2G46770.1 41.916 167 77 4 8 157 18 181 4.19e-41 150
Msa1249200 AT1G77450.1 45.455 154 78 3 8 158 12 162 4.67e-41 147
Msa1249200 AT3G15170.1 45.912 159 80 3 8 162 22 178 1.33e-40 147
Msa1249200 AT1G56010.2 40.884 181 93 4 1 173 14 188 1.31e-39 145
Msa1249200 AT3G61910.1 41.566 166 77 3 8 156 13 175 2.09e-39 145
Msa1249200 AT1G32770.1 41.071 168 82 3 5 158 15 179 5.48e-39 144
Msa1249200 AT5G63790.1 42.405 158 83 3 6 158 50 204 6.67e-39 143
Msa1249200 AT5G63790.2 42.405 158 83 3 6 158 60 214 7.13e-39 143
Msa1249200 AT5G13180.1 45.122 164 82 3 2 163 10 167 1.98e-38 140
Msa1249200 AT1G61110.1 42.169 166 81 3 4 156 14 177 5.18e-38 141
Msa1249200 AT2G33480.2 44.872 156 79 2 2 157 11 159 2.15e-36 135
Msa1249200 AT3G04070.2 42.683 164 78 4 6 156 10 170 2.47e-36 137
Msa1249200 AT3G15510.1 43.125 160 76 5 10 156 21 178 2.65e-36 137
Msa1249200 AT2G33480.1 44.872 156 81 1 2 157 11 161 3.67e-36 134
Msa1249200 AT3G12910.1 40.120 167 80 4 7 156 22 185 2.70e-35 133
Msa1249200 AT4G28530.1 41.765 170 75 4 5 156 9 172 7.78e-35 133
Msa1249200 AT3G04070.1 37.430 179 82 3 6 156 10 186 1.74e-34 132
Msa1249200 AT4G01520.1 44.444 153 75 4 9 156 7 154 3.40e-34 130
Msa1249200 AT5G04395.1 45.205 146 66 3 6 137 28 173 7.02e-34 126
Msa1249200 AT4G01540.3 45.098 153 74 4 9 156 7 154 2.47e-33 130
Msa1249200 AT4G01540.4 45.098 153 74 4 9 156 7 154 2.75e-33 130
Msa1249200 AT4G01540.2 45.098 153 74 4 9 156 7 154 3.17e-33 130
Msa1249200 AT4G01540.1 45.098 153 74 4 9 156 7 154 4.30e-33 130
Msa1249200 AT3G12977.2 50.485 103 50 1 60 161 17 119 7.08e-33 124
Msa1249200 AT3G10490.4 54.902 102 44 2 80 180 1 101 1.69e-32 127
Msa1249200 AT3G10490.3 54.902 102 44 2 80 180 1 101 1.69e-32 127
Msa1249200 AT5G61430.2 50.476 105 50 1 60 162 5 109 3.95e-32 124
Msa1249200 AT1G52880.1 40.881 159 80 4 10 156 21 177 2.34e-31 123
Msa1249200 AT4G01550.1 37.327 217 111 8 5 209 3 206 2.48e-31 125
Msa1249200 AT4G10350.2 51.579 95 46 0 63 157 20 114 1.56e-30 120
Msa1249200 AT1G56010.1 43.590 117 63 1 60 173 5 121 2.24e-28 113
Msa1249200 AT3G44350.2 37.500 160 93 6 5 158 4 162 3.12e-26 107
Msa1249200 AT5G22380.1 34.783 161 98 5 5 158 4 164 1.15e-25 105
Msa1249200 AT3G44350.1 37.580 157 93 5 5 156 4 160 4.02e-24 98.6
Msa1249200 AT3G04420.2 37.333 150 87 3 9 156 6 150 6.74e-23 99.0
Msa1249200 AT2G33480.3 47.368 95 50 0 63 157 10 104 2.06e-22 95.5
Msa1249200 AT3G04420.1 37.333 150 87 3 9 156 6 150 2.31e-22 98.2
Msa1249200 AT1G02230.1 37.333 150 82 5 9 153 6 148 3.08e-22 98.2
Msa1249200 AT1G02250.1 38.281 128 71 3 9 131 6 130 9.09e-21 94.0
Msa1249200 AT4G28530.2 37.405 131 62 3 5 117 9 137 2.48e-19 89.0
Msa1249200 AT1G02220.1 33.108 148 89 4 9 154 6 145 1.38e-18 87.8
Msa1249200 AT2G18060.2 30.366 191 97 8 86 270 2 162 1.49e-18 85.9
Msa1249200 AT5G64530.1 39.394 132 64 5 6 135 3 120 3.02e-18 82.8
Msa1249200 AT5G64530.2 39.394 132 64 5 6 135 3 120 3.71e-18 82.0
Msa1249200 AT2G43000.2 42.529 87 49 1 71 156 3 89 1.13e-17 81.6
Msa1249200 AT5G22290.2 47.059 68 28 2 87 153 2 62 7.73e-17 80.1
Msa1249200 AT1G01010.1 32.692 156 86 6 9 153 6 153 4.56e-16 80.5
Msa1249200 AT3G56530.1 30.201 149 99 3 8 154 54 199 8.11e-14 72.8
Msa1249200 AT3G04430.1 30.435 138 72 6 12 132 6 136 2.87e-12 65.9
Msa1249200 AT4G28500.1 30.286 175 96 9 3 159 56 222 5.50e-11 63.9
Msa1249200 AT5G56620.2 28.750 240 119 10 6 210 43 265 5.76e-11 64.7
Msa1249200 AT5G56620.3 29.167 240 118 11 6 210 43 265 5.90e-11 64.7

Find 181 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATCTCCTCCTCCGAATT+AGG 0.112675 8_2:-43717522 Msa1249200:five_prime_UTR
TGAAAACGATGATTCAATTT+TGG 0.123042 8_2:+43717477 None:intergenic
CCCATATTGTGCACCATTCC+TGG 0.177058 8_2:+43715840 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.199186 8_2:+43715814 None:intergenic
TTCGATGGCTATACCGAAAT+TGG 0.217229 8_2:-43717113 Msa1249200:exon
AGCAACCCGAGAAACGATTT+TGG 0.238011 8_2:-43717585 Msa1249200:five_prime_UTR
TGAGCATCGGACTTAATATT+TGG 0.263076 8_2:-43714656 Msa1249200:three_prime_UTR
CTCCATGCTATTGGATATAA+TGG 0.269719 8_2:-43715697 Msa1249200:CDS
CCCAGGAATGGTGCACAATA+TGG 0.271510 8_2:-43715841 Msa1249200:CDS
CCTATTTGACATTCATTTGC+AGG 0.281187 8_2:+43715406 None:intergenic
ATCCAATAGCATGGAGATTC+TGG 0.283199 8_2:+43715704 None:intergenic
CGAAACCCCGGAACCAATTT+CGG 0.285219 8_2:+43717100 None:intergenic
TTATCTCCAAAACGGGGATT+TGG 0.288256 8_2:-43716849 Msa1249200:CDS
CAATCTCCTCCTCCGAATTA+GGG 0.309625 8_2:-43717521 Msa1249200:five_prime_UTR
CCTGTTTGACATGAATTTGC+AGG 0.309691 8_2:+43715574 None:intergenic
CCTGCAAATTCATGTCAAAT+AGG 0.314809 8_2:-43715532 Msa1249200:CDS
CCTGTTTGACGTGAATTTGC+AGG 0.316892 8_2:+43715367 None:intergenic
CCTGCAAATGAATGTCAAAT+AGG 0.318011 8_2:-43715406 Msa1249200:CDS
CCTATTTGACATGAATTTGC+AGG 0.318113 8_2:+43715532 None:intergenic
AGTAATGTATTATTGTGATT+TGG 0.319209 8_2:-43714513 Msa1249200:three_prime_UTR
TAAAGACGCATTGTTTGAAT+TGG 0.325929 8_2:-43714580 Msa1249200:three_prime_UTR
ATGAATCGATCTACGGAAAC+AGG 0.329353 8_2:-43716776 Msa1249200:CDS
ATCTAGACTCCGAGATGTTC+TGG 0.337030 8_2:-43714758 Msa1249200:CDS
GACCAGAATCTCCATGCTAT+TGG 0.337192 8_2:-43715706 Msa1249200:CDS
CCTGTTTGACATGAATTTGC+TGG 0.344593 8_2:+43715628 None:intergenic
ACCACTCCAAATCCCCGTTT+TGG 0.346187 8_2:+43716843 None:intergenic
GTAATGTATTATTGTGATTT+GGG 0.350537 8_2:-43714512 Msa1249200:three_prime_UTR
TTTCACTTTAGAACCTTGTT+TGG 0.353707 8_2:-43714373 Msa1249200:three_prime_UTR
GATCTACGGAAACAGGGTTT+TGG 0.358106 8_2:-43716769 Msa1249200:CDS
GATAAGGACCTAACTGATAA+AGG 0.358909 8_2:-43716611 Msa1249200:CDS
GGCTATACCGAAATTGGTTC+CGG 0.364984 8_2:-43717107 Msa1249200:CDS
ATTTATCTTATCTCCAAAAC+GGG 0.365480 8_2:-43716856 Msa1249200:CDS
CCTTCAAATTCATGTCAAAC+AGG 0.368528 8_2:-43715448 Msa1249200:CDS
TGGCACTATTGCTGCTGTGC+TGG 0.372503 8_2:-43714636 Msa1249200:three_prime_UTR
CTCGTGGTGATCGCACTGAT+TGG 0.372975 8_2:-43716658 Msa1249200:CDS
CCAGAAGGTGATTTGGTCAT+TGG 0.375489 8_2:-43714613 Msa1249200:three_prime_UTR
TGACATTCATTTGCAGGATC+GGG 0.375493 8_2:+43715412 None:intergenic
GAACAATTCCTTTATCAGTT+AGG 0.379956 8_2:+43716603 None:intergenic
GGGTTTCGATTCTCTCCAAC+TGG 0.381256 8_2:-43717085 Msa1249200:CDS
TTATGAACCTTGGCAAGCTT+TGG 0.383206 8_2:-43717432 Msa1249200:five_prime_UTR
GGATGACTACTTGGATTTCA+TGG 0.384800 8_2:-43714790 Msa1249200:CDS
TTTGGGAGACCTGGATTGCT+TGG 0.388164 8_2:-43714865 Msa1249200:CDS
AACTACTAAAATATATATAA+AGG 0.389993 8_2:+43714553 None:intergenic
GATTTGGTCATTGGCACATA+TGG 0.392401 8_2:-43714604 Msa1249200:three_prime_UTR
TTGGGAGACCTGGATTGCTT+GGG 0.394189 8_2:-43714864 Msa1249200:CDS
ATGTGCTAAAGTCAGCATTC+TGG 0.394807 8_2:+43714832 None:intergenic
TTTCTCAAAAGGAAAGTGTT+GGG 0.395776 8_2:-43717043 Msa1249200:CDS
CCAATGACCAAATCACCTTC+TGG 0.400154 8_2:+43714613 None:intergenic
TCATCGGCGGAACCCTAATT+CGG 0.407702 8_2:+43717509 None:intergenic
TAAAATCCAAAATCGTTTCT+CGG 0.418105 8_2:+43717579 None:intergenic
GATTTATCTTATCTCCAAAA+CGG 0.426997 8_2:-43716857 Msa1249200:CDS
AAGTCAGCATTCTGGCCAAC+AGG 0.430726 8_2:+43714840 None:intergenic
AACTGATAAAGGAATTGTTC+AGG 0.431894 8_2:-43716600 Msa1249200:intron
GCTATACCGAAATTGGTTCC+GGG 0.435182 8_2:-43717106 Msa1249200:CDS
CCATATTGTGCACCATTCCT+GGG 0.435926 8_2:+43715841 None:intergenic
AAAACACTGATATTTCATAC+TGG 0.437726 8_2:-43716689 Msa1249200:CDS
TGACATGAATTTGCAGGGTA+GGG 0.440925 8_2:+43715538 None:intergenic
TGACATGAATTTGCAGGGTC+GGG 0.444499 8_2:+43715580 None:intergenic
TGTCCGATAGGGAAGAAGTA+TGG 0.449188 8_2:-43716812 Msa1249200:CDS
TGACATGAATTTGCTGGATC+GGG 0.450774 8_2:+43715634 None:intergenic
CCTGTTTGACATGAATTTGA+AGG 0.451294 8_2:+43715448 None:intergenic
CCTGCAAATTCACGTCAAAC+AGG 0.452097 8_2:-43715367 Msa1249200:CDS
GTGCTGGCCAGAAGGTGATT+TGG 0.452395 8_2:-43714620 Msa1249200:three_prime_UTR
TGACGTGAATTTGCAGGGTC+GGG 0.454809 8_2:+43715373 None:intergenic
TGTCAAACAGGATTACAAAC+AGG 0.456291 8_2:-43715616 Msa1249200:CDS
AAAATCCAAAATCGTTTCTC+GGG 0.458565 8_2:+43717580 None:intergenic
CCAGCAAATTCATGTCAAAC+AGG 0.459332 8_2:-43715628 Msa1249200:CDS
CAACAGGTCCCAAGCAATCC+AGG 0.459478 8_2:+43714856 None:intergenic
CCTGTGAATTCATGTCAAAC+AGG 0.460258 8_2:-43715490 Msa1249200:CDS
TGACATGAATTTGAAGGGTC+GGG 0.460660 8_2:+43715454 None:intergenic
GGAGATTGAATGATTTCAAT+CGG 0.460952 8_2:+43717536 None:intergenic
CAACAGAATAATCAAATTGT+GGG 0.461766 8_2:-43716719 Msa1249200:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.462659 8_2:-43716627 Msa1249200:CDS
TTGACATTCATTTGCAGGAT+CGG 0.462975 8_2:+43715411 None:intergenic
CGTCACTGGACTTGATCACT+AGG 0.464527 8_2:-43717388 Msa1249200:five_prime_UTR
CCAGGAATGGTGCACAATAT+GGG 0.464995 8_2:-43715840 Msa1249200:CDS
ATTGGGTTATGCATGAGTAT+AGG 0.467758 8_2:-43716640 Msa1249200:CDS
ATATCCATGCCATGTCAATC+AGG 0.469355 8_2:-43715670 Msa1249200:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.469358 8_2:-43715574 Msa1249200:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 8_2:-43715858 Msa1249200:CDS
CACATACGGAATGGCTCCTA+CGG 0.471738 8_2:-43714814 Msa1249200:CDS
CGTTCATACTTTATGAACCT+TGG 0.474224 8_2:-43717442 Msa1249200:five_prime_UTR
CATATACAAATACGCACCTT+GGG 0.480163 8_2:-43716984 Msa1249200:CDS
TTGACGTGAATTTGCAGGGT+CGG 0.485241 8_2:+43715372 None:intergenic
TTGACATGAATTTGCAGGGT+AGG 0.487996 8_2:+43715537 None:intergenic
AGTGCAGCTGGCTCAGCAAA+TGG 0.489746 8_2:+43715772 None:intergenic
AAAGTGGGAGCTAGTGCAGC+TGG 0.489936 8_2:+43715760 None:intergenic
TCGTGGTGATCGCACTGATT+GGG 0.491503 8_2:-43716657 Msa1249200:CDS
AACCATTTAATGAGGAAGAC+TGG 0.493900 8_2:-43715816 Msa1249200:CDS
CTGGATTGCTTGGGACCTGT+TGG 0.494191 8_2:-43714855 Msa1249200:CDS
CCTGTTTGACATGAATTCAC+AGG 0.497735 8_2:+43715490 None:intergenic
AAATTCATGTAAAACAAGAT+TGG 0.499270 8_2:-43715317 Msa1249200:CDS
AATCTGTAAGGTATTTCAAA+AGG 0.505571 8_2:-43715875 Msa1249200:CDS
TTGATCAATTCAACTCCAGT+TGG 0.510807 8_2:+43717070 None:intergenic
CTTCCATACTTCTTCCCTAT+CGG 0.514378 8_2:+43716809 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.514389 8_2:+43715579 None:intergenic
TTGACATGAATTTGCTGGAT+CGG 0.514396 8_2:+43715633 None:intergenic
ACATATACAAATACGCACCT+TGG 0.514869 8_2:-43716985 Msa1249200:CDS
ATCGTGAATGAACACGCTCT+TGG 0.516021 8_2:-43714462 Msa1249200:three_prime_UTR
CTGTTTGACATGAATTTGAA+GGG 0.516573 8_2:+43715449 None:intergenic
ATTGATTTGATTCGATTCGA+TGG 0.521027 8_2:-43717128 Msa1249200:exon
GAATTTGCAGGGTCGGGAGA+AGG 0.521896 8_2:+43715586 None:intergenic
CTGTTTGACGTGAATTTGCA+GGG 0.521995 8_2:+43715368 None:intergenic
GGATTCCTATGTAATCTGTA+AGG 0.523374 8_2:-43715887 Msa1249200:CDS
AGAAGTATGGAAGTGGGTCG+AGG 0.523425 8_2:-43716799 Msa1249200:CDS
TCAACAGAATAATCAAATTG+TGG 0.524176 8_2:-43716720 Msa1249200:CDS
TGGTATTTCTTCTGTCCGAT+AGG 0.528063 8_2:-43716824 Msa1249200:CDS
TTGACATGAATTTGAAGGGT+CGG 0.530544 8_2:+43715453 None:intergenic
CTGTTTGACATGAATTTGCA+GGG 0.532638 8_2:+43715575 None:intergenic
GAGTGCTGCGGAACCTAAGT+TGG 0.533048 8_2:-43714733 Msa1249200:CDS
GTGAATGAACACGCTCTTGG+TGG 0.533344 8_2:-43714459 Msa1249200:three_prime_UTR
CAATCCTGATTGACATGGCA+TGG 0.533909 8_2:+43715666 None:intergenic
TATGAATTATCCACAGGGTC+GGG 0.534846 8_2:+43715286 None:intergenic
CATGAATTTGCAGGGCCAGT+GGG 0.536500 8_2:+43715331 None:intergenic
AAATACCTTACAGATTACAT+AGG 0.536956 8_2:+43715882 None:intergenic
TTCTCAAAAGGAAAGTGTTG+GGG 0.537474 8_2:-43717042 Msa1249200:CDS
AACCATTATATCCAATAGCA+TGG 0.540691 8_2:+43715695 None:intergenic
GAATTTGCTGGATCGGGAGA+AGG 0.544144 8_2:+43715640 None:intergenic
TTATCCACAGGGTCGGGAGA+AGG 0.544235 8_2:+43715292 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8_2:+43715238 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8_2:+43715280 None:intergenic
GAATTTGAAGGGTCGGGAGA+CGG 0.546357 8_2:+43715460 None:intergenic
GGATTGGAGCTGTCTCCCAC+TGG 0.549474 8_2:-43715346 Msa1249200:CDS
GGTATTTCTTCTGTCCGATA+GGG 0.553898 8_2:-43716823 Msa1249200:CDS
AATGCTGACTTTAGCACATA+CGG 0.554890 8_2:-43714828 Msa1249200:CDS
TGTAAGGTATTTCAAAAGGA+AGG 0.556870 8_2:-43715871 Msa1249200:CDS
ACATACGGAATGGCTCCTAC+GGG 0.561143 8_2:-43714813 Msa1249200:CDS
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 8_2:-43715853 Msa1249200:CDS
GAATTTGCAGGGTAGGGAGA+AGG 0.564019 8_2:+43715544 None:intergenic
GACTGGAGTGATGATGAAGT+AGG 0.564465 8_2:-43715799 Msa1249200:CDS
TCATTTGCAGGATCGGGAGA+CGG 0.564896 8_2:+43715418 None:intergenic
TTGCTGCTGTGCTGGCCAGA+AGG 0.573325 8_2:-43714628 Msa1249200:three_prime_UTR
ACATGAATTTGCAGGGCCAG+TGG 0.576347 8_2:+43715330 None:intergenic
GGCCAGGAAAACAATGCTGA+AGG 0.577250 8_2:-43714915 Msa1249200:intron
AAATTCACGTCAAACAGGAT+TGG 0.579546 8_2:-43715362 Msa1249200:CDS
TGAGACAATTATCAAAGGAA+AGG 0.579744 8_2:+43714487 None:intergenic
ATATGAATTATCCACAGGGT+CGG 0.580394 8_2:+43715285 None:intergenic
ATAGGGAAGAAGTATGGAAG+TGG 0.581783 8_2:-43716806 Msa1249200:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.582263 8_2:-43715865 Msa1249200:CDS
AAAGTATGAACGGTGACGAA+CGG 0.583154 8_2:+43717453 None:intergenic
ATACGGAATGGCTCCTACGG+GGG 0.584987 8_2:-43714811 Msa1249200:CDS
GTCACTGGACTTGATCACTA+GGG 0.585300 8_2:-43717387 Msa1249200:five_prime_UTR
TTAGATGTCACAGGCAAAGT+GGG 0.587463 8_2:+43715745 None:intergenic
ACAAAACTATTAGATGTCAC+AGG 0.590588 8_2:+43715736 None:intergenic
CTGTTTGACATGAATTCACA+GGG 0.594081 8_2:+43715491 None:intergenic
CTATTTGACATGAATTTGCA+GGG 0.594947 8_2:+43715533 None:intergenic
ATATGGGAAACCATTTAATG+AGG 0.595239 8_2:-43715824 Msa1249200:CDS
AGCACTCTGCCAGAACATCT+CGG 0.596496 8_2:+43714749 None:intergenic
TAACTACCTGGGAGATCCCA+AGG 0.602529 8_2:+43716968 None:intergenic
TTTGCAGGGTAGGGAGAAGG+TGG 0.603489 8_2:+43715547 None:intergenic
ATTAGATGTCACAGGCAAAG+TGG 0.604507 8_2:+43715744 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.606475 8_2:+43715847 None:intergenic
TACGCACCTTGGGATCTCCC+AGG 0.607324 8_2:-43716974 Msa1249200:intron
TGACTTTAGCACATACGGAA+TGG 0.608742 8_2:-43714823 Msa1249200:CDS
GTCGAGGATGAATCGATCTA+CGG 0.611940 8_2:-43716783 Msa1249200:CDS
GGCATCAATCCTGATTGACA+TGG 0.616405 8_2:+43715661 None:intergenic
TTTGCAGGGTCGGGAGAAGG+CGG 0.617658 8_2:+43715589 None:intergenic
CAAGGTTCATAAAGTATGAA+CGG 0.619816 8_2:+43717443 None:intergenic
GATCTTGAGACAATTATCAA+AGG 0.619869 8_2:+43714482 None:intergenic
CTATACCGAAATTGGTTCCG+GGG 0.624855 8_2:-43717105 Msa1249200:CDS
AAGAACACCAAAGCTTGCCA+AGG 0.628416 8_2:+43717425 None:intergenic
TCCAAAACGGGGATTTGGAG+TGG 0.632470 8_2:-43716844 Msa1249200:CDS
GAATTCACAGGGTCTACAGA+AGG 0.634919 8_2:+43715502 None:intergenic
AACAGAATAATCAAATTGTG+GGG 0.640227 8_2:-43716718 Msa1249200:CDS
CTTCAAATTCATGTCAAACA+GGG 0.645767 8_2:-43715447 Msa1249200:CDS
TGAATCGATCTACGGAAACA+GGG 0.649117 8_2:-43716775 Msa1249200:CDS
GATGTTCTGGCAGAGTGCTG+CGG 0.652067 8_2:-43714745 Msa1249200:CDS
TAGGGAAGAAGTATGGAAGT+GGG 0.665858 8_2:-43716805 Msa1249200:CDS
TCGGCGGAACCCTAATTCGG+AGG 0.668086 8_2:+43717512 None:intergenic
GTTGGAGAGAATCGAAACCC+CGG 0.668142 8_2:+43717088 None:intergenic
TCAGAAAATATCATGCCAAG+AGG 0.673685 8_2:+43714683 None:intergenic
TTTATCTTATCTCCAAAACG+GGG 0.680682 8_2:-43716855 Msa1249200:CDS
CATACGGAATGGCTCCTACG+GGG 0.702272 8_2:-43714812 Msa1249200:CDS
CGACGACGACATATTGCCTG+AGG 0.702294 8_2:-43715173 Msa1249200:intron
GCTACGACAACAAACAACCT+CGG 0.727689 8_2:-43717173 Msa1249200:five_prime_UTR
CAATCAGTGCGATCACCACG+AGG 0.732420 8_2:+43716659 None:intergenic
GATGATATGAATTATCCACA+GGG 0.739152 8_2:+43715239 None:intergenic
CATACTGGAAAAGCACCTCG+TGG 0.744525 8_2:-43716674 Msa1249200:CDS
GATGATATGAATTATCCACA+GGG 0.748736 8_2:+43715281 None:intergenic
AATTACAGAATTCAACACCG+AGG 0.767050 8_2:+43717156 None:intergenic
TGTTAATAATGATGACCCTG+TGG 0.779783 8_2:-43715254 Msa1249200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGAAAAATTCTTTATTTT+GGG + chr8_2:43717234-43717253 None:intergenic 10.0%
!! AACTACTAAAATATATATAA+AGG + chr8_2:43717390-43717409 None:intergenic 10.0%
!!! AAATATTATGTGCTTTATTA+TGG - chr8_2:43715465-43715484 Msa1249200:CDS 15.0%
!!! CAATGAAAAATTCTTTATTT+TGG + chr8_2:43717235-43717254 None:intergenic 15.0%
!!! CAAAATAAAGAATTTTTCAT+TGG - chr8_2:43717233-43717252 Msa1249200:five_prime_UTR 15.0%
!! AAAATAAAAAATTCCAAACA+AGG + chr8_2:43717583-43717602 None:intergenic 15.0%
!!! TGATCAAATATTTTCTCAAA+AGG - chr8_2:43714886-43714905 Msa1249200:CDS 20.0%
!! ATTAACATGATTCTATTTCA+AGG + chr8_2:43715871-43715890 None:intergenic 20.0%
!! AATGATTAAAATATGCAAGA+AGG + chr8_2:43715954-43715973 None:intergenic 20.0%
!! AAATTCATGTAAAACAAGAT+TGG - chr8_2:43716623-43716642 Msa1249200:CDS 20.0%
!!! TGATGTTTCTTTTTTATGTA+TGG - chr8_2:43716846-43716865 Msa1249200:CDS 20.0%
!! ATCACAATCATTTAGTAAAA+TGG + chr8_2:43716951-43716970 None:intergenic 20.0%
!! AGTAATGTATTATTGTGATT+TGG - chr8_2:43717427-43717446 Msa1249200:five_prime_UTR 20.0%
!! GTAATGTATTATTGTGATTT+GGG - chr8_2:43717428-43717447 Msa1249200:five_prime_UTR 20.0%
! TAAAATCCAAAATCGTTTCT+CGG + chr8_2:43714364-43714383 None:intergenic 25.0%
!! AAAACGATGATTCAATTTTG+GGG + chr8_2:43714464-43714483 None:intergenic 25.0%
!! GAAAACGATGATTCAATTTT+GGG + chr8_2:43714465-43714484 None:intergenic 25.0%
!! TGAAAACGATGATTCAATTT+TGG + chr8_2:43714466-43714485 None:intergenic 25.0%
!!! TCAATTTTTTTTTACGACTG+AGG - chr8_2:43714734-43714753 Msa1249200:CDS 25.0%
! GTGAAATTAATTAACTACCT+GGG + chr8_2:43714986-43715005 None:intergenic 25.0%
! TGTGAAATTAATTAACTACC+TGG + chr8_2:43714987-43715006 None:intergenic 25.0%
! GATTTATCTTATCTCCAAAA+CGG - chr8_2:43715083-43715102 Msa1249200:intron 25.0%
! ATTTATCTTATCTCCAAAAC+GGG - chr8_2:43715084-43715103 Msa1249200:intron 25.0%
! TCAACAGAATAATCAAATTG+TGG - chr8_2:43715220-43715239 Msa1249200:CDS 25.0%
! CAACAGAATAATCAAATTGT+GGG - chr8_2:43715221-43715240 Msa1249200:CDS 25.0%
! AACAGAATAATCAAATTGTG+GGG - chr8_2:43715222-43715241 Msa1249200:CDS 25.0%
! AAAACACTGATATTTCATAC+TGG - chr8_2:43715251-43715270 Msa1249200:CDS 25.0%
! TTGAAGCATAGATATTACAT+TGG - chr8_2:43715644-43715663 Msa1249200:CDS 25.0%
! GGATTCAACAAAAGTAAAAT+AGG + chr8_2:43715850-43715869 None:intergenic 25.0%
!! AAAACAGCAAATCTCATTTT+GGG + chr8_2:43715911-43715930 None:intergenic 25.0%
!! AAAAACAGCAAATCTCATTT+TGG + chr8_2:43715912-43715931 None:intergenic 25.0%
! AATGTATTCACAATGAAAAC+AGG + chr8_2:43715996-43716015 None:intergenic 25.0%
!! ACATTTTTAACAAGCTCTTT+TGG - chr8_2:43716011-43716030 Msa1249200:intron 25.0%
! AAATACCTTACAGATTACAT+AGG + chr8_2:43716061-43716080 None:intergenic 25.0%
!! AATCTGTAAGGTATTTCAAA+AGG - chr8_2:43716065-43716084 Msa1249200:intron 25.0%
!!! TTGTTTTACATGAATTTGCA+GGG + chr8_2:43716620-43716639 None:intergenic 25.0%
! AAAATGGCATTAACATTATG+AGG + chr8_2:43716935-43716954 None:intergenic 25.0%
! CCAAAAATAATGTCAGTATT+CGG + chr8_2:43717007-43717026 None:intergenic 25.0%
! GAAAAAATGTATGCACAAAT+CGG + chr8_2:43717551-43717570 None:intergenic 25.0%
AAAATCCAAAATCGTTTCTC+GGG + chr8_2:43714363-43714382 None:intergenic 30.0%
! GAGAAACGATTTTGGATTTT+AGG - chr8_2:43714363-43714382 Msa1249200:three_prime_UTR 30.0%
GGAGATTGAATGATTTCAAT+CGG + chr8_2:43714407-43714426 None:intergenic 30.0%
!! ATTTTGGGGGAAAAATTCAT+CGG + chr8_2:43714450-43714469 None:intergenic 30.0%
! AAACGATGATTCAATTTTGG+GGG + chr8_2:43714463-43714482 None:intergenic 30.0%
CAAGGTTCATAAAGTATGAA+CGG + chr8_2:43714500-43714519 None:intergenic 30.0%
!! ATTGATTTGATTCGATTCGA+TGG - chr8_2:43714812-43714831 Msa1249200:CDS 30.0%
!! TTTTCTCAAAAGGAAAGTGT+TGG - chr8_2:43714896-43714915 Msa1249200:CDS 30.0%
!! TTTCTCAAAAGGAAAGTGTT+GGG - chr8_2:43714897-43714916 Msa1249200:CDS 30.0%
TTTATCTTATCTCCAAAACG+GGG - chr8_2:43715085-43715104 Msa1249200:intron 30.0%
GAACAATTCCTTTATCAGTT+AGG + chr8_2:43715340-43715359 None:intergenic 30.0%
AACTGATAAAGGAATTGTTC+AGG - chr8_2:43715340-43715359 Msa1249200:CDS 30.0%
TAAGTTAGCATCTTGATATG+TGG - chr8_2:43715499-43715518 Msa1249200:CDS 30.0%
!!! GCATTTTAAAGTTTGAAGTG+TGG - chr8_2:43715727-43715746 Msa1249200:CDS 30.0%
! AATTTTGCATGCACATGTAT+AGG - chr8_2:43715781-43715800 Msa1249200:CDS 30.0%
AGTAAAATAGGCACTTCATA+AGG + chr8_2:43715838-43715857 None:intergenic 30.0%
!!! CTGTTTTTACATGATGAAGT+TGG - chr8_2:43715924-43715943 Msa1249200:intron 30.0%
TATTCACAATGAAAACAGGA+CGG + chr8_2:43715992-43716011 None:intergenic 30.0%
! GGTTTGTCTTTTTAAATCAC+AGG - chr8_2:43716032-43716051 Msa1249200:intron 30.0%
! TGTAAGGTATTTCAAAAGGA+AGG - chr8_2:43716069-43716088 Msa1249200:intron 30.0%
ATATGGGAAACCATTTAATG+AGG - chr8_2:43716116-43716135 Msa1249200:intron 30.0%
ACAAAACTATTAGATGTCAC+AGG + chr8_2:43716207-43716226 None:intergenic 30.0%
AACCATTATATCCAATAGCA+TGG + chr8_2:43716248-43716267 None:intergenic 30.0%
CTATTTGACATGAATTTGCA+GGG + chr8_2:43716410-43716429 None:intergenic 30.0%
CTGTTTGACATGAATTTGAA+GGG + chr8_2:43716494-43716513 None:intergenic 30.0%
CTTCAAATTCATGTCAAACA+GGG - chr8_2:43716493-43716512 Msa1249200:intron 30.0%
!!! CTTGTTTTACATGAATTTGC+AGG + chr8_2:43716621-43716640 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG + chr8_2:43716662-43716681 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG + chr8_2:43716663-43716682 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG + chr8_2:43716662-43716681 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG + chr8_2:43716663-43716682 None:intergenic 30.0%
GAAAACAAAAAAACACGAGA+AGG + chr8_2:43716814-43716833 None:intergenic 30.0%
!!! CTCGTGTTTTTTTGTTTTCT+TGG - chr8_2:43716815-43716834 Msa1249200:CDS 30.0%
! TTAGTGTTTTCTACTCTTGT+AGG - chr8_2:43716871-43716890 Msa1249200:intron 30.0%
! CCGAATACTGACATTATTTT+TGG - chr8_2:43717004-43717023 Msa1249200:CDS 30.0%
!!! CTATCAACTGACTTTTTTGA+TGG - chr8_2:43717052-43717071 Msa1249200:CDS 30.0%
!!! AACTGACTTTTTTGATGGTT+TGG - chr8_2:43717057-43717076 Msa1249200:CDS 30.0%
!!! ACTGACTTTTTTGATGGTTT+GGG - chr8_2:43717058-43717077 Msa1249200:CDS 30.0%
TAAAGACGCATTGTTTGAAT+TGG - chr8_2:43717360-43717379 Msa1249200:five_prime_UTR 30.0%
TGAGACAATTATCAAAGGAA+AGG + chr8_2:43717456-43717475 None:intergenic 30.0%
GATCTTGAGACAATTATCAA+AGG + chr8_2:43717461-43717480 None:intergenic 30.0%
!! TTTCACTTTAGAACCTTGTT+TGG - chr8_2:43717567-43717586 Msa1249200:five_prime_UTR 30.0%
CGTTCATACTTTATGAACCT+TGG - chr8_2:43714498-43714517 Msa1249200:three_prime_UTR 35.0%
TCAAAAACTTCTTTCGTCAC+TGG - chr8_2:43714538-43714557 Msa1249200:three_prime_UTR 35.0%
! TAATCGTTTTCTGAGTTACG+AGG - chr8_2:43714705-43714724 Msa1249200:exon 35.0%
AATTACAGAATTCAACACCG+AGG + chr8_2:43714787-43714806 None:intergenic 35.0%
TTGATCAATTCAACTCCAGT+TGG + chr8_2:43714873-43714892 None:intergenic 35.0%
!! TTCTCAAAAGGAAAGTGTTG+GGG - chr8_2:43714898-43714917 Msa1249200:CDS 35.0%
ACATATACAAATACGCACCT+TGG - chr8_2:43714955-43714974 Msa1249200:intron 35.0%
CATATACAAATACGCACCTT+GGG - chr8_2:43714956-43714975 Msa1249200:intron 35.0%
ATTGGGTTATGCATGAGTAT+AGG - chr8_2:43715300-43715319 Msa1249200:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG - chr8_2:43715313-43715332 Msa1249200:CDS 35.0%
GATAAGGACCTAACTGATAA+AGG - chr8_2:43715329-43715348 Msa1249200:CDS 35.0%
!! ACTCTTAGTGTTGATGCTAT+TGG - chr8_2:43715572-43715591 Msa1249200:CDS 35.0%
AATGCCATTAGTGACATAGT+AGG + chr8_2:43715684-43715703 None:intergenic 35.0%
GGAGGATCAACAATATTTCA+AGG + chr8_2:43715812-43715831 None:intergenic 35.0%
AATAGGCACTTCATAAGGTA+AGG + chr8_2:43715833-43715852 None:intergenic 35.0%
GGATTCCTATGTAATCTGTA+AGG - chr8_2:43716053-43716072 Msa1249200:intron 35.0%
AACCATTTAATGAGGAAGAC+TGG - chr8_2:43716124-43716143 Msa1249200:intron 35.0%
CTCCATGCTATTGGATATAA+TGG - chr8_2:43716243-43716262 Msa1249200:intron 35.0%
!! TTGACATGAATTTGCTGGAT+CGG + chr8_2:43716310-43716329 None:intergenic 35.0%
TGTCAAACAGGATTACAAAC+AGG - chr8_2:43716324-43716343 Msa1249200:intron 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr8_2:43716368-43716387 None:intergenic 35.0%
CCTATTTGACATGAATTTGC+AGG + chr8_2:43716411-43716430 None:intergenic 35.0%
CCTGCAAATTCATGTCAAAT+AGG - chr8_2:43716408-43716427 Msa1249200:intron 35.0%
CTGTTTGACATGAATTCACA+GGG + chr8_2:43716452-43716471 None:intergenic 35.0%
TTGACATGAATTTGAAGGGT+CGG + chr8_2:43716490-43716509 None:intergenic 35.0%
CCTGTTTGACATGAATTTGA+AGG + chr8_2:43716495-43716514 None:intergenic 35.0%
CCTTCAAATTCATGTCAAAC+AGG - chr8_2:43716492-43716511 Msa1249200:intron 35.0%
TTGACATTCATTTGCAGGAT+CGG + chr8_2:43716532-43716551 None:intergenic 35.0%
CCTATTTGACATTCATTTGC+AGG + chr8_2:43716537-43716556 None:intergenic 35.0%
CCTGCAAATGAATGTCAAAT+AGG - chr8_2:43716534-43716553 Msa1249200:intron 35.0%
AAATTCACGTCAAACAGGAT+TGG - chr8_2:43716578-43716597 Msa1249200:intron 35.0%
ATATGAATTATCCACAGGGT+CGG + chr8_2:43716658-43716677 None:intergenic 35.0%
TGTTAATAATGATGACCCTG+TGG - chr8_2:43716686-43716705 Msa1249200:CDS 35.0%
AGCGACTCTTGATTTCTTTA+AGG - chr8_2:43716977-43716996 Msa1249200:CDS 35.0%
!!! TACTGACATTATTTTTGGCC+AGG - chr8_2:43717009-43717028 Msa1249200:CDS 35.0%
!! AATGCTGACTTTAGCACATA+CGG - chr8_2:43717112-43717131 Msa1249200:CDS 35.0%
!!! CTTTATTTTGGGTCCAACTT+AGG + chr8_2:43717223-43717242 None:intergenic 35.0%
! GAATTTTTCATTGGTCCTCT+TGG - chr8_2:43717242-43717261 Msa1249200:five_prime_UTR 35.0%
TCAGAAAATATCATGCCAAG+AGG + chr8_2:43717260-43717279 None:intergenic 35.0%
!! TGAGCATCGGACTTAATATT+TGG - chr8_2:43717284-43717303 Msa1249200:five_prime_UTR 35.0%
AAAGTATGAACGGTGACGAA+CGG + chr8_2:43714490-43714509 None:intergenic 40.0%
TTATGAACCTTGGCAAGCTT+TGG - chr8_2:43714508-43714527 Msa1249200:three_prime_UTR 40.0%
TTCGATGGCTATACCGAAAT+TGG - chr8_2:43714827-43714846 Msa1249200:CDS 40.0%
TTATCTCCAAAACGGGGATT+TGG - chr8_2:43715091-43715110 Msa1249200:intron 40.0%
TGGTATTTCTTCTGTCCGAT+AGG - chr8_2:43715116-43715135 Msa1249200:intron 40.0%
GGTATTTCTTCTGTCCGATA+GGG - chr8_2:43715117-43715136 Msa1249200:intron 40.0%
CTTCCATACTTCTTCCCTAT+CGG + chr8_2:43715134-43715153 None:intergenic 40.0%
! ATAGGGAAGAAGTATGGAAG+TGG - chr8_2:43715134-43715153 Msa1249200:intron 40.0%
! TAGGGAAGAAGTATGGAAGT+GGG - chr8_2:43715135-43715154 Msa1249200:intron 40.0%
ATGAATCGATCTACGGAAAC+AGG - chr8_2:43715164-43715183 Msa1249200:intron 40.0%
TGAATCGATCTACGGAAACA+GGG - chr8_2:43715165-43715184 Msa1249200:intron 40.0%
!!! GTTTTGGAAAGCTACTGGTA+AGG - chr8_2:43715187-43715206 Msa1249200:CDS 40.0%
!! TGTAGTTGCGCTTTTGATTG+TGG - chr8_2:43715528-43715547 Msa1249200:CDS 40.0%
TCCACCTACTATGTCACTAA+TGG - chr8_2:43715677-43715696 Msa1249200:CDS 40.0%
CATTGACCTCCTCTAAATGT+GGG - chr8_2:43715700-43715719 Msa1249200:CDS 40.0%
ATTGACCTCCTCTAAATGTG+GGG - chr8_2:43715701-43715720 Msa1249200:CDS 40.0%
GTATTTCAAAAGGAAGGTCC+TGG - chr8_2:43716075-43716094 Msa1249200:intron 40.0%
CTCCAGTCTTCCTCATTAAA+TGG + chr8_2:43716129-43716148 None:intergenic 40.0%
TTAGATGTCACAGGCAAAGT+GGG + chr8_2:43716198-43716217 None:intergenic 40.0%
ATTAGATGTCACAGGCAAAG+TGG + chr8_2:43716199-43716218 None:intergenic 40.0%
ATCCAATAGCATGGAGATTC+TGG + chr8_2:43716239-43716258 None:intergenic 40.0%
ATATCCATGCCATGTCAATC+AGG - chr8_2:43716270-43716289 Msa1249200:intron 40.0%
!! TGACATGAATTTGCTGGATC+GGG + chr8_2:43716309-43716328 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG + chr8_2:43716315-43716334 None:intergenic 40.0%
CCAGCAAATTCATGTCAAAC+AGG - chr8_2:43716312-43716331 Msa1249200:intron 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr8_2:43716364-43716383 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG + chr8_2:43716315-43716334 None:intergenic 40.0%
CCTGCAAATTCATGTCAAAC+AGG - chr8_2:43716366-43716385 Msa1249200:intron 40.0%
TGACATGAATTTGCAGGGTA+GGG + chr8_2:43716405-43716424 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+AGG + chr8_2:43716364-43716383 None:intergenic 40.0%
CCTGTTTGACATGAATTCAC+AGG + chr8_2:43716453-43716472 None:intergenic 40.0%
CCTGTGAATTCATGTCAAAC+AGG - chr8_2:43716450-43716469 Msa1249200:intron 40.0%
TGACATGAATTTGAAGGGTC+GGG + chr8_2:43716489-43716508 None:intergenic 40.0%
TGACATTCATTTGCAGGATC+GGG + chr8_2:43716531-43716550 None:intergenic 40.0%
CTGTTTGACGTGAATTTGCA+GGG + chr8_2:43716575-43716594 None:intergenic 40.0%
TATGAATTATCCACAGGGTC+GGG + chr8_2:43716657-43716676 None:intergenic 40.0%
GAAACAGATAAGCATACCTC+AGG + chr8_2:43716786-43716805 None:intergenic 40.0%
ATGTGCTAAAGTCAGCATTC+TGG + chr8_2:43717111-43717130 None:intergenic 40.0%
TGACTTTAGCACATACGGAA+TGG - chr8_2:43717117-43717136 Msa1249200:exon 40.0%
GGATGACTACTTGGATTTCA+TGG - chr8_2:43717150-43717169 Msa1249200:five_prime_UTR 40.0%
! ATTTTCTGACGACTGAGCAT+CGG - chr8_2:43717271-43717290 Msa1249200:five_prime_UTR 40.0%
! GATTTGGTCATTGGCACATA+TGG - chr8_2:43717336-43717355 Msa1249200:five_prime_UTR 40.0%
! AGCAACCCGAGAAACGATTT+TGG - chr8_2:43714355-43714374 Msa1249200:three_prime_UTR 45.0%
TCAATCTCCTCCTCCGAATT+AGG - chr8_2:43714418-43714437 Msa1249200:three_prime_UTR 45.0%
CAATCTCCTCCTCCGAATTA+GGG - chr8_2:43714419-43714438 Msa1249200:three_prime_UTR 45.0%
TTGGGGGAAAAATTCATCGG+CGG + chr8_2:43714447-43714466 None:intergenic 45.0%
AAGAACACCAAAGCTTGCCA+AGG + chr8_2:43714518-43714537 None:intergenic 45.0%
GTCACTGGACTTGATCACTA+GGG - chr8_2:43714553-43714572 Msa1249200:three_prime_UTR 45.0%
GCTACGACAACAAACAACCT+CGG - chr8_2:43714767-43714786 Msa1249200:CDS 45.0%
! GGCTATACCGAAATTGGTTC+CGG - chr8_2:43714833-43714852 Msa1249200:CDS 45.0%
! GCTATACCGAAATTGGTTCC+GGG - chr8_2:43714834-43714853 Msa1249200:CDS 45.0%
! CTATACCGAAATTGGTTCCG+GGG - chr8_2:43714835-43714854 Msa1249200:CDS 45.0%
TGTCCGATAGGGAAGAAGTA+TGG - chr8_2:43715128-43715147 Msa1249200:intron 45.0%
GTCGAGGATGAATCGATCTA+CGG - chr8_2:43715157-43715176 Msa1249200:intron 45.0%
! GATCTACGGAAACAGGGTTT+TGG - chr8_2:43715171-43715190 Msa1249200:intron 45.0%
!!! ACAGGGTTTTGGAAAGCTAC+TGG - chr8_2:43715182-43715201 Msa1249200:CDS 45.0%
GCCATTAGTGACATAGTAGG+TGG + chr8_2:43715681-43715700 None:intergenic 45.0%
! GCATTGACCTCCTCTAAATG+TGG - chr8_2:43715699-43715718 Msa1249200:CDS 45.0%
TTGACCTCCTCTAAATGTGG+GGG - chr8_2:43715702-43715721 Msa1249200:CDS 45.0%
AATGCAACCCCCACATTTAG+AGG + chr8_2:43715712-43715731 None:intergenic 45.0%
AGGCACTTCATAAGGTAAGG+AGG + chr8_2:43715830-43715849 None:intergenic 45.0%
CCATATTGTGCACCATTCCT+GGG + chr8_2:43716102-43716121 None:intergenic 45.0%
CCAGGAATGGTGCACAATAT+GGG - chr8_2:43716100-43716119 Msa1249200:intron 45.0%
! GACTGGAGTGATGATGAAGT+AGG - chr8_2:43716141-43716160 Msa1249200:intron 45.0%
GACCAGAATCTCCATGCTAT+TGG - chr8_2:43716234-43716253 Msa1249200:intron 45.0%
CAATCCTGATTGACATGGCA+TGG + chr8_2:43716277-43716296 None:intergenic 45.0%
GGCATCAATCCTGATTGACA+TGG + chr8_2:43716282-43716301 None:intergenic 45.0%
TGACATGAATTTGCAGGGTC+GGG + chr8_2:43716363-43716382 None:intergenic 45.0%
GAATTCACAGGGTCTACAGA+AGG + chr8_2:43716441-43716460 None:intergenic 45.0%
TTGACGTGAATTTGCAGGGT+CGG + chr8_2:43716571-43716590 None:intergenic 45.0%
CCTGTTTGACGTGAATTTGC+AGG + chr8_2:43716576-43716595 None:intergenic 45.0%
CCTGCAAATTCACGTCAAAC+AGG - chr8_2:43716573-43716592 Msa1249200:intron 45.0%
AGGAGACAATGCAAACTGCA+GGG + chr8_2:43716915-43716934 None:intergenic 45.0%
! CACCTTCAGCATTGTTTTCC+TGG + chr8_2:43717030-43717049 None:intergenic 45.0%
!! TTTTGATGGTTTGGGAGACC+TGG - chr8_2:43717066-43717085 Msa1249200:CDS 45.0%
ATCTAGACTCCGAGATGTTC+TGG - chr8_2:43717182-43717201 Msa1249200:five_prime_UTR 45.0%
CCAATGACCAAATCACCTTC+TGG + chr8_2:43717330-43717349 None:intergenic 45.0%
!! CCAGAAGGTGATTTGGTCAT+TGG - chr8_2:43717327-43717346 Msa1249200:five_prime_UTR 45.0%
ATCGTGAATGAACACGCTCT+TGG - chr8_2:43717478-43717497 Msa1249200:five_prime_UTR 45.0%
TCATCGGCGGAACCCTAATT+CGG + chr8_2:43714434-43714453 None:intergenic 50.0%
CGTCACTGGACTTGATCACT+AGG - chr8_2:43714552-43714571 Msa1249200:three_prime_UTR 50.0%
CGAAACCCCGGAACCAATTT+CGG + chr8_2:43714843-43714862 None:intergenic 50.0%
GTTGGAGAGAATCGAAACCC+CGG + chr8_2:43714855-43714874 None:intergenic 50.0%
GGGTTTCGATTCTCTCCAAC+TGG - chr8_2:43714855-43714874 Msa1249200:CDS 50.0%
TAACTACCTGGGAGATCCCA+AGG + chr8_2:43714975-43714994 None:intergenic 50.0%
TCCAAAACGGGGATTTGGAG+TGG - chr8_2:43715096-43715115 Msa1249200:intron 50.0%
! ACCACTCCAAATCCCCGTTT+TGG + chr8_2:43715100-43715119 None:intergenic 50.0%
! AGAAGTATGGAAGTGGGTCG+AGG - chr8_2:43715141-43715160 Msa1249200:intron 50.0%
!! CATACTGGAAAAGCACCTCG+TGG - chr8_2:43715266-43715285 Msa1249200:CDS 50.0%
!! TCGTGGTGATCGCACTGATT+GGG - chr8_2:43715283-43715302 Msa1249200:CDS 50.0%
CCCAGGAATGGTGCACAATA+TGG - chr8_2:43716099-43716118 Msa1249200:intron 50.0%
CCCATATTGTGCACCATTCC+TGG + chr8_2:43716103-43716122 None:intergenic 50.0%
!! GAATTTGCTGGATCGGGAGA+AGG + chr8_2:43716303-43716322 None:intergenic 50.0%
GAATTTGCAGGGTAGGGAGA+AGG + chr8_2:43716399-43716418 None:intergenic 50.0%
GAATTTGAAGGGTCGGGAGA+CGG + chr8_2:43716483-43716502 None:intergenic 50.0%
TCATTTGCAGGATCGGGAGA+CGG + chr8_2:43716525-43716544 None:intergenic 50.0%
TGACGTGAATTTGCAGGGTC+GGG + chr8_2:43716570-43716589 None:intergenic 50.0%
CATGAATTTGCAGGGCCAGT+GGG + chr8_2:43716612-43716631 None:intergenic 50.0%
ACATGAATTTGCAGGGCCAG+TGG + chr8_2:43716613-43716632 None:intergenic 50.0%
GGAGACAATGCAAACTGCAG+GGG + chr8_2:43716914-43716933 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG + chr8_2:43716916-43716935 None:intergenic 50.0%
GGCCAGGAAAACAATGCTGA+AGG - chr8_2:43717025-43717044 Msa1249200:CDS 50.0%
TTTGGGAGACCTGGATTGCT+TGG - chr8_2:43717075-43717094 Msa1249200:CDS 50.0%
TTGGGAGACCTGGATTGCTT+GGG - chr8_2:43717076-43717095 Msa1249200:CDS 50.0%
AAGTCAGCATTCTGGCCAAC+AGG + chr8_2:43717103-43717122 None:intergenic 50.0%
CACATACGGAATGGCTCCTA+CGG - chr8_2:43717126-43717145 Msa1249200:exon 50.0%
ACATACGGAATGGCTCCTAC+GGG - chr8_2:43717127-43717146 Msa1249200:exon 50.0%
AGCACTCTGCCAGAACATCT+CGG + chr8_2:43717194-43717213 None:intergenic 50.0%
GTGAATGAACACGCTCTTGG+TGG - chr8_2:43717481-43717500 Msa1249200:five_prime_UTR 50.0%
CAATCAGTGCGATCACCACG+AGG + chr8_2:43715284-43715303 None:intergenic 55.0%
! CTCGTGGTGATCGCACTGAT+TGG - chr8_2:43715282-43715301 Msa1249200:CDS 55.0%
GCAACCCCCACATTTAGAGG+AGG + chr8_2:43715709-43715728 None:intergenic 55.0%
AAAAGGAAGGTCCTGGTCCC+AGG - chr8_2:43716082-43716101 Msa1249200:intron 55.0%
! AGTGCAGCTGGCTCAGCAAA+TGG + chr8_2:43716171-43716190 None:intergenic 55.0%
AAAGTGGGAGCTAGTGCAGC+TGG + chr8_2:43716183-43716202 None:intergenic 55.0%
GAATTTGCAGGGTCGGGAGA+AGG + chr8_2:43716357-43716376 None:intergenic 55.0%
TTTGCAGGGTAGGGAGAAGG+TGG + chr8_2:43716396-43716415 None:intergenic 55.0%
TTATCCACAGGGTCGGGAGA+AGG + chr8_2:43716651-43716670 None:intergenic 55.0%
CGACGACGACATATTGCCTG+AGG - chr8_2:43716767-43716786 Msa1249200:CDS 55.0%
CAACAGGTCCCAAGCAATCC+AGG + chr8_2:43717087-43717106 None:intergenic 55.0%
CTGGATTGCTTGGGACCTGT+TGG - chr8_2:43717085-43717104 Msa1249200:CDS 55.0%
CATACGGAATGGCTCCTACG+GGG - chr8_2:43717128-43717147 Msa1249200:exon 55.0%
ATACGGAATGGCTCCTACGG+GGG - chr8_2:43717129-43717148 Msa1249200:exon 55.0%
TCCTACGGGGGATGACTACT+TGG - chr8_2:43717141-43717160 Msa1249200:five_prime_UTR 55.0%
TCCAAGTAGTCATCCCCCGT+AGG + chr8_2:43717145-43717164 None:intergenic 55.0%
!! GATGTTCTGGCAGAGTGCTG+CGG - chr8_2:43717195-43717214 Msa1249200:five_prime_UTR 55.0%
! GAGTGCTGCGGAACCTAAGT+TGG - chr8_2:43717207-43717226 Msa1249200:five_prime_UTR 55.0%
TGGCACTATTGCTGCTGTGC+TGG - chr8_2:43717304-43717323 Msa1249200:five_prime_UTR 55.0%
! GTGCTGGCCAGAAGGTGATT+TGG - chr8_2:43717320-43717339 Msa1249200:five_prime_UTR 55.0%
GCGGAACCCTAATTCGGAGG+AGG + chr8_2:43714428-43714447 None:intergenic 60.0%
TCGGCGGAACCCTAATTCGG+AGG + chr8_2:43714431-43714450 None:intergenic 60.0%
TACGCACCTTGGGATCTCCC+AGG - chr8_2:43714966-43714985 Msa1249200:intron 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG - chr8_2:43716087-43716106 Msa1249200:intron 60.0%
TGTGCACCATTCCTGGGACC+AGG + chr8_2:43716096-43716115 None:intergenic 60.0%
TTTGCAGGGTCGGGAGAAGG+CGG + chr8_2:43716354-43716373 None:intergenic 60.0%
GGATTGGAGCTGTCTCCCAC+TGG - chr8_2:43716594-43716613 Msa1249200:intron 60.0%
! TTGCTGCTGTGCTGGCCAGA+AGG - chr8_2:43717312-43717331 Msa1249200:five_prime_UTR 60.0%
GGTGCCTTCTCCCGACCCTG+TGG - chr8_2:43716644-43716663 Msa1249200:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 43714345 43717617 43714345 ID=Msa1249200;Name=Msa1249200
chr8_2 mRNA 43714345 43717617 43714345 ID=Msa1249200-mRNA-1;Parent=Msa1249200;Name=Msa1249200-mRNA-1;_AED=0.06;_eAED=0.06;_QI=486|1|1|1|1|1|4|377|459
chr8_2 exon 43714345 43714931 43714345 ID=Msa1249200-mRNA-1:exon:13312;Parent=Msa1249200-mRNA-1
chr8_2 exon 43715174 43715908 43715174 ID=Msa1249200-mRNA-1:exon:13311;Parent=Msa1249200-mRNA-1
chr8_2 exon 43716601 43716878 43716601 ID=Msa1249200-mRNA-1:exon:13310;Parent=Msa1249200-mRNA-1
chr8_2 exon 43716975 43717617 43716975 ID=Msa1249200-mRNA-1:exon:13309;Parent=Msa1249200-mRNA-1
chr8_2 five_prime_UTR 43717132 43717617 43717132 ID=Msa1249200-mRNA-1:five_prime_utr;Parent=Msa1249200-mRNA-1
chr8_2 CDS 43716975 43717131 43716975 ID=Msa1249200-mRNA-1:cds;Parent=Msa1249200-mRNA-1
chr8_2 CDS 43716601 43716878 43716601 ID=Msa1249200-mRNA-1:cds;Parent=Msa1249200-mRNA-1
chr8_2 CDS 43715174 43715908 43715174 ID=Msa1249200-mRNA-1:cds;Parent=Msa1249200-mRNA-1
chr8_2 CDS 43714722 43714931 43714722 ID=Msa1249200-mRNA-1:cds;Parent=Msa1249200-mRNA-1
chr8_2 three_prime_UTR 43714345 43714721 43714345 ID=Msa1249200-mRNA-1:three_prime_utr;Parent=Msa1249200-mRNA-1
Gene Sequence

>Msa1249200

ATGGCTATACCGAAATTGGTTCCGGGGTTTCGATTCTCTCCAACTGGAGTTGAATTGATCAAATATTTTCTCAAAAGGAAAGTGTTGGGGAAAAAGTTTCATAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGATTTATCTTATCTCCAAAACGGGGATTTGGAGTGGTATTTCTTCTGTCCGATAGGGAAGAAGTATGGAAGTGGGTCGAGGATGAATCGATCTACGGAAACAGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACAGAATAATCAAATTGTGGGGATGATTAAAACACTGATATTTCATACTGGAAAAGCACCTCGTGGTGATCGCACTGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACCTAACTGATAAAGGAATTGTTCAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAAACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCATTTGCTGAGCCAGCTGCACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCATGTCAATCAGGATTGATGCCTTCTCCCGATCCAGCAAATTCATGTCAAACAGGATTACAAACAGGATTACCGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGAGTTCCACCTTCTCCCTACCCTGCAAATTCATGTCAAATAGGATTGACGCCTTCTGTAGACCCTGTGAATTCATGTCAAACAGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGATCCTGCAAATGAATGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACGTCAAACAGGATTGGAGCTGTCTCCCACTGGCCCTGCAAATTCATGTAAAACAAGATTGGTGCCTTCTCCCGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACATTTTATCAATGCTTGATATGTTCGACGACGACATATTGCCTGAGGAAAACAATGCTGAAGGTGCACTATCAACTGACTTTTTTGATGGTTTGGGAGACCTGGATTGCTTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATACGGAATGGCTCCTACGGGGGATGACTACTTGGATTTCATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTGCTGCGGAACCTAAGTTGGACCCAAAATAA
Protein sequence

>Msa1249200

MAIPKLVPGFRFSPTGVELIKYFLKRKVLGKKFHNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIGKKYGSGSRMNRSTETGFWKATGKDRAVQQNNQIVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDKGIVQDSYVICKVFQKEGPGPRNGAQYGKPFNEEDWSDDEVGIPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGSISMPCQSGLMPSPDPANSCQTGLQTGLPPSPDPANSCQTGVPPSPYPANSCQIGLTPSVDPVNSCQTGFMPSPDPSNSCQTGYMPSPDPANECQIGFMSPDPANSRQTGLELSPTGPANSCKTRLVPSPDPVDNSYHQAVNNDDPVDNSYHQAVNNDDILSMLDMFDDDILPEENNAEGALSTDFFDGLGDLDCLGPVGQNADFSTYGMAPTGDDYLDFMELIDLDSEMFWQSAAEPKLDPK*