AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1293570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293570 MtrunA17_Chr8g0360401 99.382 809 5 0 1 809 1 809 0.0 1668
Msa1293570 MtrunA17_Chr4g0050661 30.590 559 350 13 27 564 21 562 5.24e-63 226
Msa1293570 MtrunA17_Chr7g0233071 27.052 329 217 6 46 372 40 347 5.27e-20 95.1
Msa1293570 MtrunA17_Chr8g0388271 26.627 338 216 6 31 356 9 326 9.27e-19 90.9
Msa1293570 MtrunA17_Chr8g0337041 32.632 190 115 4 46 231 40 220 1.20e-18 90.9
Msa1293570 MtrunA17_Chr5g0396561 31.963 219 119 6 31 231 9 215 4.70e-18 89.0
Msa1293570 MtrunA17_Chr8g0391891 25.698 358 222 9 31 372 12 341 2.08e-17 86.7
Msa1293570 MtrunA17_Chr4g0055051 29.858 211 133 3 31 231 9 214 8.64e-17 84.7
Msa1293570 MtrunA17_Chr8g0379961 29.555 247 155 8 11 253 37 268 4.19e-16 82.8
Msa1293570 MtrunA17_Chr8g0346971 29.464 224 133 5 27 231 5 222 3.50e-15 79.7
Msa1293570 MtrunA17_Chr4g0049731 30.288 208 128 4 31 231 20 217 8.16e-15 78.6
Msa1293570 MtrunA17_Chr8g0379941 28.516 256 160 9 11 257 40 281 2.77e-14 77.0
Msa1293570 MtrunA17_Chr2g0279671 29.187 209 129 4 31 231 29 226 1.91e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293570 AT1G53140.1 76.005 821 169 8 5 809 9 817 0.0 1252
Msa1293570 AT3G19720.2 31.083 563 346 14 25 564 27 570 4.15e-61 220
Msa1293570 AT3G19720.1 31.083 563 346 14 25 564 27 570 5.50e-61 221
Msa1293570 AT3G19720.3 29.766 598 344 16 25 564 27 606 2.11e-55 204
Msa1293570 AT1G60530.1 28.736 261 159 7 1 253 21 262 7.55e-20 91.7
Msa1293570 AT3G60190.1 32.796 186 120 2 46 231 40 220 9.06e-20 94.7
Msa1293570 AT3G61760.3 26.822 343 223 9 24 356 2 326 9.77e-19 90.5
Msa1293570 AT3G61760.2 27.083 336 217 9 31 356 9 326 1.29e-18 90.9
Msa1293570 AT3G61760.1 27.083 336 217 9 31 356 9 326 1.52e-18 90.9
Msa1293570 AT1G14830.1 26.722 363 227 11 24 372 5 342 2.73e-18 90.1
Msa1293570 AT2G44590.3 31.183 186 123 2 46 231 35 215 8.44e-18 88.6
Msa1293570 AT1G60500.1 30.488 246 149 8 12 253 38 265 3.39e-17 86.7
Msa1293570 AT5G42080.2 30.045 223 140 4 31 243 9 225 7.38e-17 84.3
Msa1293570 AT5G42080.4 30.332 211 132 3 31 231 9 214 1.22e-16 84.7
Msa1293570 AT5G42080.1 30.332 211 132 3 31 231 9 214 1.22e-16 84.7
Msa1293570 AT5G42080.3 30.332 211 132 3 31 231 9 214 1.38e-16 84.7
Msa1293570 AT4G33650.2 29.524 210 132 4 31 231 42 244 5.08e-14 76.6
Msa1293570 AT4G33650.1 29.524 210 132 4 31 231 42 244 5.25e-14 76.6
Msa1293570 AT2G14120.3 30.189 212 129 6 31 231 26 229 1.74e-12 71.6
Msa1293570 AT2G14120.2 30.189 212 129 6 31 231 26 229 1.79e-12 71.6
Msa1293570 AT2G14120.1 30.189 212 129 6 31 231 26 229 1.87e-12 71.6
Msa1293570 AT2G14120.4 30.189 212 129 6 31 231 26 229 2.07e-12 71.2
Msa1293570 AT2G44590.1 26.882 186 114 3 46 231 35 198 4.82e-11 66.6
Msa1293570 AT2G44590.2 26.882 186 114 3 46 231 35 198 4.99e-11 66.6

Find 236 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACGGCAACAATTTC+AGG 0.151688 8_3:-50953169 None:intergenic
GAGGTCACTTGTGAACTTTC+TGG 0.154101 8_3:+50954685 Msa1293570:CDS
AATGCCACTCTTCGTCTTTA+TGG 0.169993 8_3:+50955046 Msa1293570:CDS
CTCCCCATTTCCAAATAAAA+TGG 0.180476 8_3:-50956490 None:intergenic
CTTGAGACGATTATCAAATT+TGG 0.197072 8_3:-50953956 None:intergenic
TGCTTACACTCGATTCTTAA+AGG 0.220715 8_3:+50956008 Msa1293570:CDS
ATTCTAGACGCTCTCTTTCT+TGG 0.228334 8_3:-50956420 None:intergenic
TTCAAATCCTATATTGGTTT+TGG 0.239603 8_3:+50954571 Msa1293570:CDS
CGCAATTCAGGTCAACAAAT+TGG 0.253583 8_3:+50957515 Msa1293570:three_prime_UTR
TGAACCTCGTTGCCGCTTCC+AGG 0.270752 8_3:+50953315 Msa1293570:CDS
CCAGTGTTGCATTCTTTAGA+TGG 0.279464 8_3:-50957573 None:intergenic
GAAAAGTTCAAATCCTATAT+TGG 0.285422 8_3:+50954565 Msa1293570:CDS
TTTAGGAAGCTTATTTGATT+TGG 0.292118 8_3:+50955404 Msa1293570:CDS
CTCAAAGTGGCATTGGGATT+TGG 0.294675 8_3:+50954993 Msa1293570:CDS
TGACGAGACCCTCTGTAATT+TGG 0.297105 8_3:+50957542 Msa1293570:three_prime_UTR
CACGTATACGTGCGAAATGC+TGG 0.302416 8_3:-50956554 None:intergenic
TGGCCGTCTGAGAGATTATT+TGG 0.324676 8_3:+50954591 Msa1293570:CDS
CGAACGTGTGCTGCTTTACT+TGG 0.330929 8_3:-50956282 None:intergenic
CTTAGGAGAAACTGCTGTTT+TGG 0.332944 8_3:-50953583 None:intergenic
GTTGACCTGAATTGCGTCAT+AGG 0.333781 8_3:-50957508 None:intergenic
AAGAGAAGAGAAGAGAAGAT+AGG 0.345103 8_3:-50952974 None:intergenic
GGATGTGGATGGAGTCTTTG+TGG 0.345262 8_3:-50953050 None:intergenic
TGATCAGGAGATGGGGTCTC+AGG 0.345824 8_3:-50956336 None:intergenic
CATCAGGGTGCCTTGATTGA+TGG 0.346683 8_3:+50954917 Msa1293570:intron
AAGTAGCAGACCTGTGAGTA+TGG 0.356134 8_3:-50956087 None:intergenic
GATCGCCTTGTTGTGGCTCT+CGG 0.357701 8_3:+50957257 Msa1293570:CDS
GTGAACCTATGACGCAATTC+AGG 0.362569 8_3:+50957503 Msa1293570:three_prime_UTR
GAAAAGGAGGGGAGCGATGC+AGG 0.370679 8_3:-50952950 None:intergenic
GTAAGCTTCGAAGCGAGATT+TGG 0.370913 8_3:-50953098 None:intergenic
GTATGGAAGTCCGGTGGTTT+CGG 0.371097 8_3:+50953506 Msa1293570:CDS
CAGCCAGGTGATCCTGTATA+TGG 0.379808 8_3:+50956357 Msa1293570:CDS
ACAGGATCACCTGGCTGATC+AGG 0.382456 8_3:-50956351 None:intergenic
GAGGAAGATTCAGAAGAGTA+TGG 0.382821 8_3:+50953489 Msa1293570:CDS
GAGAAGATAGGGGAAAAGGA+GGG 0.388362 8_3:-50952962 None:intergenic
CAAGCCGCAGCTGTCGCTTT+CGG 0.391417 8_3:+50953130 Msa1293570:CDS
AAACCCCGGTGTGTCAATAA+TGG 0.393318 8_3:-50953649 None:intergenic
CACTTGTGAACTTTCTGGAT+TGG 0.394884 8_3:+50954690 Msa1293570:CDS
GTTGAAGGAACAAGAGTATA+CGG 0.395803 8_3:-50953846 None:intergenic
AGTCTTTGTGGGAGTGGTGG+TGG 0.399337 8_3:-50953038 None:intergenic
ATCGGAGTGCTTTCTTGAAC+GGG 0.404155 8_3:-50953074 None:intergenic
ATTCCACACTACTTTGTTGA+AGG 0.404178 8_3:-50953861 None:intergenic
TTGCCCATGCTGGCCGAGGT+GGG 0.406137 8_3:+50955280 Msa1293570:CDS
CAGACGGCCAAAACCAATAT+AGG 0.406834 8_3:-50954578 None:intergenic
AGAGAAGAGAAGAGAAGATA+GGG 0.407112 8_3:-50952973 None:intergenic
TGAACTCATTCAAGCAAGAA+TGG 0.407252 8_3:-50957394 None:intergenic
AGAAGAGAAGATAGGGGAAA+AGG 0.407773 8_3:-50952966 None:intergenic
TGCCCATGCTGGCCGAGGTG+GGG 0.410115 8_3:+50955281 Msa1293570:CDS
GATGTGGATGGAGTCTTTGT+GGG 0.411443 8_3:-50953049 None:intergenic
AGAGAAGATAGGGGAAAAGG+AGG 0.412828 8_3:-50952963 None:intergenic
CCTTGTTGTGGCTCTCGGGT+TGG 0.414030 8_3:+50957262 Msa1293570:CDS
TATTCAGCTTTGAGTACAAT+TGG 0.418369 8_3:-50953606 None:intergenic
TGGAATGGTGCTCCTCTTTG+TGG 0.418865 8_3:+50953878 Msa1293570:CDS
GTGTCAATAATGGTAAGATT+TGG 0.420577 8_3:-50953639 None:intergenic
GCCCATGCTGGCCGAGGTGG+GGG 0.421052 8_3:+50955282 Msa1293570:CDS
TTTGGAAATGGGGAGAGAAC+AGG 0.425343 8_3:+50956498 Msa1293570:CDS
GCGTCTAGAATGACAGGAAA+TGG 0.428588 8_3:+50956432 Msa1293570:CDS
GGGTCTCAGGGATAGTCATC+TGG 0.431491 8_3:-50956323 None:intergenic
TTTCTATGCCCTCCATATAC+AGG 0.431806 8_3:-50956369 None:intergenic
ATGACATGGTGGTGTCTGTT+TGG 0.436481 8_3:-50953015 None:intergenic
GGGAGTGGTGGTGGATGACA+TGG 0.438859 8_3:-50953029 None:intergenic
GGTTATCTTCAAAAGTGCTT+CGG 0.440026 8_3:-50953562 None:intergenic
GCTTTGAGTACAATTGGCTT+AGG 0.447637 8_3:-50953600 None:intergenic
TAGAAGCTTACCAAGGAGTC+AGG 0.448083 8_3:-50956623 None:intergenic
GGATGGAGTCTTTGTGGGAG+TGG 0.448353 8_3:-50953044 None:intergenic
AAGAGAGCGTCTAGAATGAC+AGG 0.452216 8_3:+50956426 Msa1293570:CDS
ATGGACATGTTTGTCGCTCC+TGG 0.456326 8_3:+50957314 Msa1293570:CDS
ATCTCATCAGGCGTGTTCTC+CGG 0.457464 8_3:-50953787 None:intergenic
TAAAGACGAAGAGTGGCATT+GGG 0.457812 8_3:-50955043 None:intergenic
CCTGAAATTGTTGCCGTTGG+TGG 0.458140 8_3:+50953169 Msa1293570:CDS
CTTGCCCATGCTGGCCGAGG+TGG 0.459436 8_3:+50955279 Msa1293570:CDS
CAGTGTTGCATTCTTTAGAT+GGG 0.462728 8_3:-50957572 None:intergenic
TGAAGCATTTGAAGAATAAG+AGG 0.464570 8_3:-50953277 None:intergenic
CGTGAAGTTCTTGTTGAAAG+AGG 0.465409 8_3:+50956573 Msa1293570:CDS
AAGCGACAGCTGCGGCTTGG+AGG 0.465991 8_3:-50953126 None:intergenic
GAAATGTTGCCTCTATCCTT+AGG 0.466550 8_3:-50954454 None:intergenic
GTGGCTCTGCCTAAGGATAG+AGG 0.469322 8_3:+50954445 Msa1293570:CDS
CGACAGCTGCGGCTTGGAGG+CGG 0.469566 8_3:-50953123 None:intergenic
TCAAGCAAGGCAAGAGTTGA+TGG 0.470376 8_3:-50954649 None:intergenic
AATATATTGCTTGCCCATGC+TGG 0.470464 8_3:+50955270 Msa1293570:CDS
GAGCGGTCTCAAAGTGGCAT+TGG 0.471095 8_3:+50954986 Msa1293570:CDS
TTTCCCCACTGCTCAGGGGA+AGG 0.472652 8_3:-50954950 None:intergenic
AATCGGAGTGCTTTCTTGAA+CGG 0.472734 8_3:-50953075 None:intergenic
AGCAGTGCAAGCAGCTTGTT+AGG 0.478959 8_3:+50956040 Msa1293570:CDS
GGGAGCTCTTTCCATCAGAT+TGG 0.479145 8_3:-50953192 None:intergenic
AGCGGTCTCAAAGTGGCATT+GGG 0.479457 8_3:+50954987 Msa1293570:CDS
TGGAGTCTTTGTGGGAGTGG+TGG 0.483490 8_3:-50953041 None:intergenic
CTTTCTTGAACGGGTGGATG+TGG 0.485584 8_3:-50953065 None:intergenic
AGAAGATAGGGGAAAAGGAG+GGG 0.488082 8_3:-50952961 None:intergenic
ACTCTGGATTCCTGACTCCT+TGG 0.488697 8_3:+50956613 Msa1293570:CDS
AAATGAAGAGGCTGAAGCCT+GGG 0.492594 8_3:-50956163 None:intergenic
ATTCTGCTTCTCATGATGTA+AGG 0.492714 8_3:+50956208 Msa1293570:CDS
CGAAAGCGACAGCTGCGGCT+TGG 0.493583 8_3:-50953129 None:intergenic
CCACTCTTCGTCTTTATGGA+GGG 0.493817 8_3:+50955050 Msa1293570:CDS
CACACCGGGGTTTGTTCTCA+AGG 0.496399 8_3:+50953659 Msa1293570:CDS
TTGAGTGCAAGTGGTTACCT+TGG 0.496456 8_3:+50954400 Msa1293570:CDS
AAAATGAAGAGGCTGAAGCC+TGG 0.498478 8_3:-50956164 None:intergenic
TTCAGAAGAGTATGGAAGTC+CGG 0.500297 8_3:+50953497 Msa1293570:CDS
CAATGTCCGTGAAGTTGAGA+TGG 0.505101 8_3:+50953243 Msa1293570:CDS
TCCCTTCTCGAAGCACTCCT+CGG 0.506447 8_3:+50953211 Msa1293570:CDS
CACTCTTCGTCTTTATGGAG+GGG 0.509742 8_3:+50955051 Msa1293570:CDS
ATGGAGGGGCTGCATTTGAG+AGG 0.509770 8_3:+50955065 Msa1293570:CDS
TGTGAACGATGAGAAATTCA+TGG 0.512127 8_3:+50957295 Msa1293570:CDS
AGTGGTGGTGGATGACATGG+TGG 0.512129 8_3:-50953026 None:intergenic
ATCTGCTGCACCATCAATCA+AGG 0.512415 8_3:-50954927 None:intergenic
AGTGGCATTGGGATTTGGCC+TGG 0.512652 8_3:+50954998 Msa1293570:CDS
TTTGTATGGTAGGCGAAGAA+GGG 0.513608 8_3:+50953760 Msa1293570:intron
ACGTATACGTGCGAAATGCT+GGG 0.513649 8_3:-50956553 None:intergenic
GCCACTCTTCGTCTTTATGG+AGG 0.514353 8_3:+50955049 Msa1293570:CDS
ATCTAGTAACTCTAATCAAA+GGG 0.514624 8_3:-50957432 None:intergenic
GATCTAGTAACTCTAATCAA+AGG 0.515206 8_3:-50957433 None:intergenic
CACCTGGCTGATCAGGAGAT+GGG 0.515425 8_3:-50956344 None:intergenic
ATTTACTGATCGGTGGGAAG+TGG 0.515582 8_3:+50954369 Msa1293570:CDS
AAATTGATCCCACGTTTAGA+CGG 0.515819 8_3:+50953917 Msa1293570:CDS
TGGTGTCTGTTTGGTAAGTA+AGG 0.518740 8_3:-50953006 None:intergenic
GCAGATCTCTCATGTGGACT+CGG 0.519793 8_3:+50954495 Msa1293570:CDS
GAAACTTGAAGCGTTTATGC+CGG 0.520142 8_3:-50956130 None:intergenic
TCATCTTCGCGACGGTGTCA+AGG 0.520175 8_3:+50954528 Msa1293570:CDS
GTAGGCGAAGAAGGGTGAAC+CGG 0.523086 8_3:+50953768 Msa1293570:intron
TCACCTGGCTGATCAGGAGA+TGG 0.523556 8_3:-50956345 None:intergenic
CTTGAACGGGTGGATGTGGA+TGG 0.528374 8_3:-50953061 None:intergenic
ATAAAGACGAAGAGTGGCAT+TGG 0.529100 8_3:-50955044 None:intergenic
CACCAACGGCAACAATTTCA+GGG 0.530283 8_3:-50953168 None:intergenic
ATCCCTGAAATTGTTGCCGT+TGG 0.530967 8_3:+50953166 Msa1293570:CDS
GGAAACATGGATGGCTATGT+AGG 0.531101 8_3:+50955964 Msa1293570:CDS
ACCATGGAAAGAATCTCATC+AGG 0.532315 8_3:-50953799 None:intergenic
CTCTTGCCTTGCTTGAGCAA+AGG 0.532479 8_3:+50954656 Msa1293570:CDS
TCCATCAGATTGGCCACCAA+CGG 0.533133 8_3:-50953182 None:intergenic
GCCTGATGAGATTCTTTCCA+TGG 0.536247 8_3:+50953798 Msa1293570:CDS
TCTTTCCATGGTGAAGACAT+TGG 0.538252 8_3:+50953810 Msa1293570:CDS
ACGGCAACAATTTCAGGGAT+GGG 0.539046 8_3:-50953163 None:intergenic
AAGTTTCAACAAATTTCCCC+AGG 0.541943 8_3:+50956146 Msa1293570:CDS
ATAGCAAAACCATGGCTCCT+TGG 0.542677 8_3:-50957457 None:intergenic
ACCTCCAGAAAAGAATGCAC+TGG 0.543318 8_3:+50956248 Msa1293570:CDS
GAGAAGAGAAGAGAAGATAG+GGG 0.544023 8_3:-50952972 None:intergenic
CACGTGCTGCTGCTAGATCA+TGG 0.544481 8_3:+50955337 Msa1293570:CDS
TTCGAAGCGAGATTTGGAAT+CGG 0.545179 8_3:-50953092 None:intergenic
AGATCCTTCCCCTGAGCAGT+GGG 0.546793 8_3:+50954946 Msa1293570:CDS
AACGGCAACAATTTCAGGGA+TGG 0.548624 8_3:-50953164 None:intergenic
CTTACCATTATTGACACACC+GGG 0.551065 8_3:+50953645 Msa1293570:CDS
GATCAGGAGATGGGGTCTCA+GGG 0.554324 8_3:-50956335 None:intergenic
ACCGAGGAGTGCTTCGAGAA+GGG 0.554409 8_3:-50953212 None:intergenic
AATGACTTTCAACCATGTGC+CGG 0.555549 8_3:+50956111 Msa1293570:CDS
AACCGAGGAGTGCTTCGAGA+AGG 0.556754 8_3:-50953213 None:intergenic
CCTCCATATACAGGATCACC+TGG 0.558162 8_3:-50956360 None:intergenic
TGTATATGGAGGGCATAGAA+AGG 0.559667 8_3:+50956371 Msa1293570:CDS
CGGCAACAATTTCAGGGATG+GGG 0.560566 8_3:-50953162 None:intergenic
CATCTTCGCGACGGTGTCAA+GGG 0.562680 8_3:+50954529 Msa1293570:CDS
GGAGGGCATAGAAAGGAGCT+TGG 0.564041 8_3:+50956378 Msa1293570:CDS
AAGGGCGAGTGTTGTCTCCA+AGG 0.564899 8_3:-50954417 None:intergenic
CAGATCCTTCCCCTGAGCAG+TGG 0.565180 8_3:+50954945 Msa1293570:CDS
CAGATGAGAAATGTCTGAAG+TGG 0.568898 8_3:-50954728 None:intergenic
ACCCCATCTCCTGATCAGCC+AGG 0.569139 8_3:+50956342 Msa1293570:CDS
CTTCAGACATTTCTCATCTG+AGG 0.569507 8_3:+50954731 Msa1293570:CDS
TGCTTCTCATGATGTAAGGA+GGG 0.572516 8_3:+50956212 Msa1293570:CDS
TGAATGAATTTACCTGGAAG+CGG 0.574973 8_3:-50953327 None:intergenic
ATGGACTGGTAACTGAATCA+AGG 0.577837 8_3:-50956068 None:intergenic
TTCACATCGGTGATGACACC+AGG 0.578996 8_3:-50955016 None:intergenic
CTGCTTCTCATGATGTAAGG+AGG 0.579370 8_3:+50956211 Msa1293570:CDS
GAGCCACAACAAGGCGATCG+CGG 0.580908 8_3:-50957253 None:intergenic
GAGTACCCATCTCAACTTCA+CGG 0.582067 8_3:-50953249 None:intergenic
GACGAAGAGTGGCATTGGGG+GGG 0.582077 8_3:-50955039 None:intergenic
GCCGTTGGTGGCCAATCTGA+TGG 0.582734 8_3:+50953181 Msa1293570:CDS
GTAGGAATTTACTGATCGGT+GGG 0.584050 8_3:+50954363 Msa1293570:intron
TGTAGCACATCTATGGCACC+AGG 0.584087 8_3:-50957332 None:intergenic
CAAATTTGATAATCGTCTCA+AGG 0.587563 8_3:+50953957 Msa1293570:CDS
TCTTACCATTATTGACACAC+CGG 0.591780 8_3:+50953644 Msa1293570:CDS
TGTAGGAATTTACTGATCGG+TGG 0.592128 8_3:+50954362 Msa1293570:intron
AGACGAAGAGTGGCATTGGG+GGG 0.592146 8_3:-50955040 None:intergenic
GAAGCGTTTATGCCGGCACA+TGG 0.592289 8_3:-50956123 None:intergenic
TGGAGGGGCTGCATTTGAGA+GGG 0.593307 8_3:+50955066 Msa1293570:CDS
GCTTGGAATATGCAATGACA+TGG 0.594337 8_3:+50956395 Msa1293570:CDS
ACTAGATCTCCAAGGAGCCA+TGG 0.595731 8_3:+50957448 Msa1293570:three_prime_UTR
AAAGACGAAGAGTGGCATTG+GGG 0.597295 8_3:-50955042 None:intergenic
GCAACGAGGTTCAAGAGCGG+AGG 0.599376 8_3:-50953305 None:intergenic
ATCGTAGATGCCGAAACCAC+CGG 0.600918 8_3:-50953516 None:intergenic
ACCTGGCTGATCAGGAGATG+GGG 0.601811 8_3:-50956343 None:intergenic
CCAGGTGATCCTGTATATGG+AGG 0.602528 8_3:+50956360 Msa1293570:CDS
CAGCCGCGATCGCCTTGTTG+TGG 0.604218 8_3:+50957250 Msa1293570:intron
TTGCTTGCCCATGCTGGCCG+AGG 0.604281 8_3:+50955276 Msa1293570:CDS
TTCAACAAAGTAGTGTGGAA+TGG 0.605436 8_3:+50953863 Msa1293570:CDS
GGAGTGCTTTCTTGAACGGG+TGG 0.607124 8_3:-50953071 None:intergenic
CTTCGCGACGGTGTCAAGGG+AGG 0.607661 8_3:+50954532 Msa1293570:CDS
AATGTCCGTGAAGTTGAGAT+GGG 0.609276 8_3:+50953244 Msa1293570:CDS
CAACGAGGTTCAAGAGCGGA+GGG 0.610546 8_3:-50953304 None:intergenic
GCAGACCTGTGAGTATGGAC+TGG 0.612333 8_3:-50956082 None:intergenic
GATCGCTATTTGAGTGCAAG+TGG 0.616547 8_3:+50954391 Msa1293570:CDS
CCATCTAAAGAATGCAACAC+TGG 0.618459 8_3:+50957573 Msa1293570:three_prime_UTR
CCAACCCGAGAGCCACAACA+AGG 0.618603 8_3:-50957262 None:intergenic
GTTCCTTCAACAAAGTAGTG+TGG 0.620081 8_3:+50953858 Msa1293570:CDS
AATGATTGTCCGTCTAAACG+TGG 0.620311 8_3:-50953926 None:intergenic
AAGACGAAGAGTGGCATTGG+GGG 0.622835 8_3:-50955041 None:intergenic
CAGGTGATCCTGTATATGGA+GGG 0.623092 8_3:+50956361 Msa1293570:CDS
TTTCAAATGAAGAGTTCCGT+AGG 0.624099 8_3:+50954473 Msa1293570:CDS
CCCTCCATAAAGACGAAGAG+TGG 0.625484 8_3:-50955050 None:intergenic
ACTACACCTTTGCTCAAGCA+AGG 0.627943 8_3:-50954662 None:intergenic
TCACATGCAGTATCAAGAAG+AGG 0.637274 8_3:-50955366 None:intergenic
AGTTACCAGTCCATACTCAC+AGG 0.637819 8_3:+50956077 Msa1293570:CDS
CTTGGAATATGCAATGACAT+GGG 0.638221 8_3:+50956396 Msa1293570:CDS
TCCAGAAAAGAATGCACTGG+AGG 0.638622 8_3:+50956251 Msa1293570:CDS
AGCTTCCTAAAACAAAAGCA+AGG 0.639138 8_3:-50955392 None:intergenic
AATGAAGAGGCTGAAGCCTG+GGG 0.640485 8_3:-50956162 None:intergenic
ACTCCAAATAATCTCTCAGA+CGG 0.641458 8_3:-50954594 None:intergenic
ACATGTAGGAATTTACTGAT+CGG 0.642242 8_3:+50954359 Msa1293570:intron
AATAGAGTCTAACCACAAAG+AGG 0.646234 8_3:-50953890 None:intergenic
TTCAAAGCATAGCAAAACCA+TGG 0.646496 8_3:-50957465 None:intergenic
AACAAGAGTATACGGTGTGG+AGG 0.647370 8_3:-50953838 None:intergenic
GAAGCATTTGAAGAATAAGA+GGG 0.647522 8_3:-50953276 None:intergenic
TGGCTCTAGAAAGAAACCGC+AGG 0.648302 8_3:+50955424 Msa1293570:CDS
GTTACATCGACATTAAACTC+TGG 0.649396 8_3:+50956597 Msa1293570:CDS
TTAGAGTTACTAGATCTCCA+AGG 0.663188 8_3:+50957440 Msa1293570:three_prime_UTR
TTGGAATATGCAATGACATG+GGG 0.665817 8_3:+50956397 Msa1293570:CDS
TTACACATGCTTCAACACGC+AGG 0.667443 8_3:-50957611 None:intergenic
CCGTAGGCAGATCTCTCATG+TGG 0.674279 8_3:+50954489 Msa1293570:CDS
GGTATAATACCAAATTACAG+AGG 0.676272 8_3:-50957551 None:intergenic
CTCGCCGAAAGCGACAGCTG+CGG 0.676909 8_3:-50953134 None:intergenic
AGTAGCCAATGTCTTCACCA+TGG 0.677040 8_3:-50953815 None:intergenic
AGAAGAGTATGGAAGTCCGG+TGG 0.677609 8_3:+50953500 Msa1293570:CDS
GATCTCTCATGTGGACTCGG+AGG 0.678782 8_3:+50954498 Msa1293570:CDS
GTATAATACCAAATTACAGA+GGG 0.679020 8_3:-50957550 None:intergenic
AGCTTCTATCAGCAACCATG+TGG 0.680329 8_3:+50954774 Msa1293570:CDS
GCTTGAGCAAAGGTGTAGTG+AGG 0.681974 8_3:+50954666 Msa1293570:CDS
CCACATGAGAGATCTGCCTA+CGG 0.689058 8_3:-50954489 None:intergenic
GTAGAAGAGCGGTCTCAAAG+TGG 0.702768 8_3:+50954980 Msa1293570:CDS
ATGATTGTCCGTCTAAACGT+GGG 0.703297 8_3:-50953925 None:intergenic
TACATGCTGAATCATGCCTG+CGG 0.705447 8_3:-50955440 None:intergenic
GCATTTGAAGAATAAGAGGG+CGG 0.705612 8_3:-50953273 None:intergenic
GTTATGCATCATCTTCGCGA+CGG 0.711144 8_3:+50954520 Msa1293570:CDS
AATACCTTGAGAACAAACCC+CGG 0.725703 8_3:-50953663 None:intergenic
GCGGCAACGAGGTTCAAGAG+CGG 0.730968 8_3:-50953308 None:intergenic
GGACATTGAAGCGAAAACCG+AGG 0.735109 8_3:-50953228 None:intergenic
TTTACCTGGAAGCGGCAACG+AGG 0.743831 8_3:-50953319 None:intergenic
TTCCTAAAACAAAAGCAAGG+CGG 0.747988 8_3:-50955389 None:intergenic
AGGAACAAGAGTATACGGTG+TGG 0.749192 8_3:-50953841 None:intergenic
GATCCTTCCCCTGAGCAGTG+GGG 0.749398 8_3:+50954947 Msa1293570:CDS
GACTGGTAACTGAATCAAGG+TGG 0.786961 8_3:-50956065 None:intergenic
TTACCATTATTGACACACCG+GGG 0.788837 8_3:+50953646 Msa1293570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAACTTTG+AGG - chr8_3:50956926-50956945 None:intergenic 10.0%
!!! TTTGTTAATTCATGTAATTT+TGG + chr8_3:50953427-50953446 Msa1293570:intron 15.0%
!! TTGTGTAAAAAAAATAATAC+AGG + chr8_3:50953467-50953486 Msa1293570:intron 15.0%
!! AATTGCAATCTTTAATATTA+CGG - chr8_3:50954090-50954109 None:intergenic 15.0%
!!! ATACATATTATTGTTTTACA+GGG + chr8_3:50954299-50954318 Msa1293570:intron 15.0%
!! AAATATAGTTAGAATCTAAA+GGG - chr8_3:50955783-50955802 None:intergenic 15.0%
!! AAAATATAGTTAGAATCTAA+AGG - chr8_3:50955784-50955803 None:intergenic 15.0%
!! CAAGAAATAAAACAAAATAT+AGG - chr8_3:50955884-50955903 None:intergenic 15.0%
!! TGTAAAAAAAATAATACAGG+AGG + chr8_3:50953470-50953489 Msa1293570:intron 20.0%
!!! GATACATATTATTGTTTTAC+AGG + chr8_3:50954298-50954317 Msa1293570:intron 20.0%
!!! AGCAAAATTTATTTTGAACT+TGG + chr8_3:50954825-50954844 Msa1293570:intron 20.0%
!!! GAATTTCAATTTGAAATGAA+AGG - chr8_3:50955218-50955237 None:intergenic 20.0%
!! CATTTCAAATTGAAATTCAT+TGG + chr8_3:50955220-50955239 Msa1293570:intron 20.0%
!! GTATCTATCATTACTTTAAT+AGG + chr8_3:50955242-50955261 Msa1293570:intron 20.0%
!! AATAGACAGGAAATAAATTA+GGG - chr8_3:50955663-50955682 None:intergenic 20.0%
!! TAATAGACAGGAAATAAATT+AGG - chr8_3:50955664-50955683 None:intergenic 20.0%
!!! AAATTAACTTTTCTGTGTTT+TGG + chr8_3:50955713-50955732 Msa1293570:intron 20.0%
!!! AATTAACTTTTCTGTGTTTT+GGG + chr8_3:50955714-50955733 Msa1293570:intron 20.0%
!! TTAGTTTATTTCATTTCTTC+TGG + chr8_3:50955750-50955769 Msa1293570:intron 20.0%
!!! CAAAATGATTCCATTTTATT+TGG + chr8_3:50956480-50956499 Msa1293570:CDS 20.0%
!!! ATTCCATTTTATTTGGAAAT+GGG + chr8_3:50956487-50956506 Msa1293570:CDS 20.0%
!! GAAAATAAGTGACATAAATA+TGG - chr8_3:50956849-50956868 None:intergenic 20.0%
!!! TTGATTTAATTTGTTCAACA+AGG + chr8_3:50956964-50956983 Msa1293570:intron 20.0%
!! TGTAGTAGTATTTATGTATT+TGG - chr8_3:50957003-50957022 None:intergenic 20.0%
!! AATTATTGAATATACTTACG+TGG - chr8_3:50957190-50957209 None:intergenic 20.0%
!!! TGAGATCTAATTGTTTTGTA+TGG + chr8_3:50953746-50953765 Msa1293570:intron 25.0%
!!! ATCTAATTGTTTTGTATGGT+AGG + chr8_3:50953750-50953769 Msa1293570:intron 25.0%
!! ACATCACTGTTCTAAATAAA+CGG + chr8_3:50954020-50954039 Msa1293570:intron 25.0%
! TTTAATATTACGGACAATTG+CGG - chr8_3:50954080-50954099 None:intergenic 25.0%
!! GGTATGTATCATTTTATACA+AGG - chr8_3:50954153-50954172 None:intergenic 25.0%
! GAAAAGTTCAAATCCTATAT+TGG + chr8_3:50954565-50954584 Msa1293570:CDS 25.0%
!!! TTCAAATCCTATATTGGTTT+TGG + chr8_3:50954571-50954590 Msa1293570:CDS 25.0%
! TTTAGGAAGCTTATTTGATT+TGG + chr8_3:50955404-50955423 Msa1293570:CDS 25.0%
! ACATCATAAATAAGACAGAA+GGG - chr8_3:50955492-50955511 None:intergenic 25.0%
! AACATCATAAATAAGACAGA+AGG - chr8_3:50955493-50955512 None:intergenic 25.0%
! AGATATTAAGAGAAGAAGAA+AGG + chr8_3:50955618-50955637 Msa1293570:intron 25.0%
! GAAATAAATTAGGGTTCAAA+TGG - chr8_3:50955654-50955673 None:intergenic 25.0%
! TATTCAATTGCATAATAGAC+AGG - chr8_3:50955676-50955695 None:intergenic 25.0%
! AACACAGAAAAGTTAATTTC+TGG - chr8_3:50955712-50955731 None:intergenic 25.0%
! CAATTCAAGAAAAAATGAAG+AGG - chr8_3:50956178-50956197 None:intergenic 25.0%
!!! GATTCCATTTTATTTGGAAA+TGG + chr8_3:50956486-50956505 Msa1293570:CDS 25.0%
!!! TTCCATTTTATTTGGAAATG+GGG + chr8_3:50956488-50956507 Msa1293570:CDS 25.0%
!!! TTATTTATTTTCTGCGATCT+TGG + chr8_3:50956663-50956682 Msa1293570:intron 25.0%
! ACATAAATATGGACACAAAA+AGG - chr8_3:50956838-50956857 None:intergenic 25.0%
!!! TTTAATTTGTTCAACAAGGT+TGG + chr8_3:50956968-50956987 Msa1293570:intron 25.0%
! AAAAATACTACTACATATGC+CGG + chr8_3:50957041-50957060 Msa1293570:intron 25.0%
! AATGAAGAAACATGAAATAC+CGG - chr8_3:50957063-50957082 None:intergenic 25.0%
! AGCACTATCATTATCATTAA+GGG - chr8_3:50957108-50957127 None:intergenic 25.0%
! AAGCACTATCATTATCATTA+AGG - chr8_3:50957109-50957128 None:intergenic 25.0%
! ATCTAGTAACTCTAATCAAA+GGG - chr8_3:50957435-50957454 None:intergenic 25.0%
! GTATAATACCAAATTACAGA+GGG - chr8_3:50957553-50957572 None:intergenic 25.0%
! GAAGCATTTGAAGAATAAGA+GGG - chr8_3:50953279-50953298 None:intergenic 30.0%
! TGAAGCATTTGAAGAATAAG+AGG - chr8_3:50953280-50953299 None:intergenic 30.0%
AGAGAATGAATGAATTTACC+TGG - chr8_3:50953336-50953355 None:intergenic 30.0%
!! TATTCAGCTTTGAGTACAAT+TGG - chr8_3:50953609-50953628 None:intergenic 30.0%
GTGTCAATAATGGTAAGATT+TGG - chr8_3:50953642-50953661 None:intergenic 30.0%
CTTGAGACGATTATCAAATT+TGG - chr8_3:50953959-50953978 None:intergenic 30.0%
! CAAATTTGATAATCGTCTCA+AGG + chr8_3:50953957-50953976 Msa1293570:CDS 30.0%
! CATCACTGTTCTAAATAAAC+GGG + chr8_3:50954021-50954040 Msa1293570:intron 30.0%
CAAAGTTGCAATAACATTCA+CGG - chr8_3:50954122-50954141 None:intergenic 30.0%
! TGTTTTACAGGGTTCAATAA+TGG + chr8_3:50954310-50954329 Msa1293570:intron 30.0%
! TTTTAGTGACGAGTTAGTAA+TGG + chr8_3:50954333-50954352 Msa1293570:intron 30.0%
TTTAGTGACGAGTTAGTAAT+GGG + chr8_3:50954334-50954353 Msa1293570:intron 30.0%
ACATGTAGGAATTTACTGAT+CGG + chr8_3:50954359-50954378 Msa1293570:intron 30.0%
! TGGATTGGATTCAAAAATTG+AGG + chr8_3:50954705-50954724 Msa1293570:CDS 30.0%
! TAACTGTTTTACTCTGCAAA+TGG + chr8_3:50954888-50954907 Msa1293570:intron 30.0%
!!! AATATTTTTTCCTCGTGTCT+TGG + chr8_3:50955539-50955558 Msa1293570:intron 30.0%
!! TTGTTTGTTTTCCATGAAGA+TGG + chr8_3:50955931-50955950 Msa1293570:intron 30.0%
!! TGTTTGTTTTCCATGAAGAT+GGG + chr8_3:50955932-50955951 Msa1293570:intron 30.0%
!! TTTCTGGAGGTATATTTTCT+TGG - chr8_3:50956239-50956258 None:intergenic 30.0%
!! ATAAATAACTTTGAGGCTTC+CGG - chr8_3:50956919-50956938 None:intergenic 30.0%
ACTATCATTATCATTAAGGG+AGG - chr8_3:50957105-50957124 None:intergenic 30.0%
! TGATAGTGCTTTCTTTCATT+TGG + chr8_3:50957118-50957137 Msa1293570:intron 30.0%
ATGACATGCAGTATTTAATG+TGG + chr8_3:50957163-50957182 Msa1293570:intron 30.0%
! TTCATTTTGTAGCACATCTA+TGG - chr8_3:50957342-50957361 None:intergenic 30.0%
GATCTAGTAACTCTAATCAA+AGG - chr8_3:50957436-50957455 None:intergenic 30.0%
GGTATAATACCAAATTACAG+AGG - chr8_3:50957554-50957573 None:intergenic 30.0%
AGAGAAGAGAAGAGAAGATA+GGG - chr8_3:50952976-50952995 None:intergenic 35.0%
AAGAGAAGAGAAGAGAAGAT+AGG - chr8_3:50952977-50952996 None:intergenic 35.0%
TGAATGAATTTACCTGGAAG+CGG - chr8_3:50953330-50953349 None:intergenic 35.0%
AGTGCTTCACAAATTCTTGT+TGG + chr8_3:50953392-50953411 Msa1293570:intron 35.0%
!! GGTTATCTTCAAAAGTGCTT+CGG - chr8_3:50953565-50953584 None:intergenic 35.0%
TCTTACCATTATTGACACAC+CGG + chr8_3:50953644-50953663 Msa1293570:CDS 35.0%
ATGATAAGTGATTCGACTGA+TGG + chr8_3:50953701-50953720 Msa1293570:intron 35.0%
CGACTGATGGTATGTTTAAT+TGG + chr8_3:50953714-50953733 Msa1293570:intron 35.0%
! GTTGAAGGAACAAGAGTATA+CGG - chr8_3:50953849-50953868 None:intergenic 35.0%
ATTCCACACTACTTTGTTGA+AGG - chr8_3:50953864-50953883 None:intergenic 35.0%
TTCAACAAAGTAGTGTGGAA+TGG + chr8_3:50953863-50953882 Msa1293570:CDS 35.0%
AATAGAGTCTAACCACAAAG+AGG - chr8_3:50953893-50953912 None:intergenic 35.0%
AAATTGATCCCACGTTTAGA+CGG + chr8_3:50953917-50953936 Msa1293570:CDS 35.0%
!! GTCTCAAGTTTGATTTTCTC+CGG + chr8_3:50954234-50954253 Msa1293570:intron 35.0%
!! ATTTTCTCCGGTGTCAATTT+AGG + chr8_3:50954246-50954265 Msa1293570:intron 35.0%
! GTTAGTAATGGGATACATGT+AGG + chr8_3:50954345-50954364 Msa1293570:intron 35.0%
TTTCAAATGAAGAGTTCCGT+AGG + chr8_3:50954473-50954492 Msa1293570:CDS 35.0%
ACTCCAAATAATCTCTCAGA+CGG - chr8_3:50954597-50954616 None:intergenic 35.0%
GAAAAACAACAGTAGAAGAG+CGG + chr8_3:50954969-50954988 Msa1293570:CDS 35.0%
TTTCATAAACTCGTGATCTG+AGG + chr8_3:50955172-50955191 Msa1293570:intron 35.0%
TTCCTAAAACAAAAGCAAGG+CGG - chr8_3:50955392-50955411 None:intergenic 35.0%
AGCTTCCTAAAACAAAAGCA+AGG - chr8_3:50955395-50955414 None:intergenic 35.0%
GCTCTATCAGTATCTTACAT+GGG - chr8_3:50955833-50955852 None:intergenic 35.0%
AGCTCTATCAGTATCTTACA+TGG - chr8_3:50955834-50955853 None:intergenic 35.0%
AAGATACTGATAGAGCTGAA+TGG + chr8_3:50955837-50955856 Msa1293570:intron 35.0%
CCATGAAGATGGGATAAAAA+CGG + chr8_3:50955942-50955961 Msa1293570:intron 35.0%
CATGAAGATGGGATAAAAAC+GGG + chr8_3:50955943-50955962 Msa1293570:intron 35.0%
ATAAAAACGGGAAACATGGA+TGG + chr8_3:50955955-50955974 Msa1293570:CDS 35.0%
!!! TAGGTTTTCATGCTGCTTTA+AGG + chr8_3:50955983-50956002 Msa1293570:CDS 35.0%
TGCTTACACTCGATTCTTAA+AGG + chr8_3:50956008-50956027 Msa1293570:CDS 35.0%
AAGTTTCAACAAATTTCCCC+AGG + chr8_3:50956146-50956165 Msa1293570:CDS 35.0%
ATTCTGCTTCTCATGATGTA+AGG + chr8_3:50956208-50956227 Msa1293570:CDS 35.0%
CTTGGAATATGCAATGACAT+GGG + chr8_3:50956396-50956415 Msa1293570:CDS 35.0%
TTGGAATATGCAATGACATG+GGG + chr8_3:50956397-50956416 Msa1293570:CDS 35.0%
CTCCCCATTTCCAAATAAAA+TGG - chr8_3:50956493-50956512 None:intergenic 35.0%
GTTACATCGACATTAAACTC+TGG + chr8_3:50956597-50956616 Msa1293570:CDS 35.0%
AAATTTCCAGTTCCAGCTTT+AGG + chr8_3:50956714-50956733 Msa1293570:intron 35.0%
AATTTCCAGTTCCAGCTTTA+GGG + chr8_3:50956715-50956734 Msa1293570:intron 35.0%
TAAATTGCAACTGAAGGTGA+TGG - chr8_3:50956895-50956914 None:intergenic 35.0%
ACCTTCAGTTGCAATTTAAC+CGG + chr8_3:50956897-50956916 Msa1293570:intron 35.0%
TGTGAACGATGAGAAATTCA+TGG + chr8_3:50957295-50957314 Msa1293570:CDS 35.0%
TGAACTCATTCAAGCAAGAA+TGG - chr8_3:50957397-50957416 None:intergenic 35.0%
ATGAGTTCAAAAACGTTGCT+CGG + chr8_3:50957408-50957427 Msa1293570:CDS 35.0%
TTAGAGTTACTAGATCTCCA+AGG + chr8_3:50957440-50957459 Msa1293570:three_prime_UTR 35.0%
TTCAAAGCATAGCAAAACCA+TGG - chr8_3:50957468-50957487 None:intergenic 35.0%
CAGTGTTGCATTCTTTAGAT+GGG - chr8_3:50957575-50957594 None:intergenic 35.0%
AGAAGAGAAGATAGGGGAAA+AGG - chr8_3:50952969-50952988 None:intergenic 40.0%
GAGAAGAGAAGAGAAGATAG+GGG - chr8_3:50952975-50952994 None:intergenic 40.0%
TGGTGTCTGTTTGGTAAGTA+AGG - chr8_3:50953009-50953028 None:intergenic 40.0%
! AATCGGAGTGCTTTCTTGAA+CGG - chr8_3:50953078-50953097 None:intergenic 40.0%
! TTCGAAGCGAGATTTGGAAT+CGG - chr8_3:50953095-50953114 None:intergenic 40.0%
AATGTCCGTGAAGTTGAGAT+GGG + chr8_3:50953244-50953263 Msa1293570:CDS 40.0%
GCATTTGAAGAATAAGAGGG+CGG - chr8_3:50953276-50953295 None:intergenic 40.0%
!! GAATTTGTGAAGCACTGACA+CGG - chr8_3:50953388-50953407 None:intergenic 40.0%
GAGGAAGATTCAGAAGAGTA+TGG + chr8_3:50953489-50953508 Msa1293570:CDS 40.0%
! TTCAGAAGAGTATGGAAGTC+CGG + chr8_3:50953497-50953516 Msa1293570:CDS 40.0%
!! CTTAGGAGAAACTGCTGTTT+TGG - chr8_3:50953586-50953605 None:intergenic 40.0%
! GCTTTGAGTACAATTGGCTT+AGG - chr8_3:50953603-50953622 None:intergenic 40.0%
CTTACCATTATTGACACACC+GGG + chr8_3:50953645-50953664 Msa1293570:CDS 40.0%
TTACCATTATTGACACACCG+GGG + chr8_3:50953646-50953665 Msa1293570:CDS 40.0%
AATACCTTGAGAACAAACCC+CGG - chr8_3:50953666-50953685 None:intergenic 40.0%
! TTTTGTATGGTAGGCGAAGA+AGG + chr8_3:50953759-50953778 Msa1293570:intron 40.0%
TTTGTATGGTAGGCGAAGAA+GGG + chr8_3:50953760-50953779 Msa1293570:intron 40.0%
ACCATGGAAAGAATCTCATC+AGG - chr8_3:50953802-50953821 None:intergenic 40.0%
TCTTTCCATGGTGAAGACAT+TGG + chr8_3:50953810-50953829 Msa1293570:CDS 40.0%
GTTCCTTCAACAAAGTAGTG+TGG + chr8_3:50953858-50953877 Msa1293570:CDS 40.0%
ATGATTGTCCGTCTAAACGT+GGG - chr8_3:50953928-50953947 None:intergenic 40.0%
AATGATTGTCCGTCTAAACG+TGG - chr8_3:50953929-50953948 None:intergenic 40.0%
CAATAACATTCACGGTCACA+TGG - chr8_3:50954114-50954133 None:intergenic 40.0%
TGATACATACCAAACCCACT+TGG + chr8_3:50954162-50954181 Msa1293570:intron 40.0%
GATACATACCAAACCCACTT+GGG + chr8_3:50954163-50954182 Msa1293570:intron 40.0%
ATCAAACTTGAGACCTTGAG+AGG - chr8_3:50954228-50954247 None:intergenic 40.0%
TAGCCTACCTAAATTGACAC+CGG - chr8_3:50954256-50954275 None:intergenic 40.0%
TGTAGGAATTTACTGATCGG+TGG + chr8_3:50954362-50954381 Msa1293570:intron 40.0%
GTAGGAATTTACTGATCGGT+GGG + chr8_3:50954363-50954382 Msa1293570:intron 40.0%
TAGGCAGAGCCACAAAAAAA+GGG - chr8_3:50954438-50954457 None:intergenic 40.0%
TTAGGCAGAGCCACAAAAAA+AGG - chr8_3:50954439-50954458 None:intergenic 40.0%
!!! TTTTTTTGTGGCTCTGCCTA+AGG + chr8_3:50954438-50954457 Msa1293570:CDS 40.0%
GAAATGTTGCCTCTATCCTT+AGG - chr8_3:50954457-50954476 None:intergenic 40.0%
CACTTGTGAACTTTCTGGAT+TGG + chr8_3:50954690-50954709 Msa1293570:CDS 40.0%
CAGATGAGAAATGTCTGAAG+TGG - chr8_3:50954731-50954750 None:intergenic 40.0%
CTTCAGACATTTCTCATCTG+AGG + chr8_3:50954731-50954750 Msa1293570:CDS 40.0%
AACTATGATTACCCACCACA+TGG - chr8_3:50954792-50954811 None:intergenic 40.0%
TGCAAATGGATGTTCCATCA+GGG + chr8_3:50954902-50954921 Msa1293570:intron 40.0%
TAAAGACGAAGAGTGGCATT+GGG - chr8_3:50955046-50955065 None:intergenic 40.0%
ATAAAGACGAAGAGTGGCAT+TGG - chr8_3:50955047-50955066 None:intergenic 40.0%
AATGCCACTCTTCGTCTTTA+TGG + chr8_3:50955046-50955065 Msa1293570:CDS 40.0%
AATATATTGCTTGCCCATGC+TGG + chr8_3:50955270-50955289 Msa1293570:CDS 40.0%
TCACATGCAGTATCAAGAAG+AGG - chr8_3:50955369-50955388 None:intergenic 40.0%
TTTCTCAAACCCCATTGAGA+GGG - chr8_3:50955584-50955603 None:intergenic 40.0%
ATTTCTCAAACCCCATTGAG+AGG - chr8_3:50955585-50955604 None:intergenic 40.0%
CAATGGGGTTTGAGAAATGT+AGG + chr8_3:50955587-50955606 Msa1293570:intron 40.0%
!! CCGTTTTTATCCCATCTTCA+TGG - chr8_3:50955945-50955964 None:intergenic 40.0%
TGGGATAAAAACGGGAAACA+TGG + chr8_3:50955951-50955970 Msa1293570:CDS 40.0%
!! ATGGACTGGTAACTGAATCA+AGG - chr8_3:50956071-50956090 None:intergenic 40.0%
AATGACTTTCAACCATGTGC+CGG + chr8_3:50956111-50956130 Msa1293570:CDS 40.0%
! GAAACTTGAAGCGTTTATGC+CGG - chr8_3:50956133-50956152 None:intergenic 40.0%
TGCTTCTCATGATGTAAGGA+GGG + chr8_3:50956212-50956231 Msa1293570:CDS 40.0%
TTTCTATGCCCTCCATATAC+AGG - chr8_3:50956372-50956391 None:intergenic 40.0%
! TGTATATGGAGGGCATAGAA+AGG + chr8_3:50956371-50956390 Msa1293570:CDS 40.0%
GCTTGGAATATGCAATGACA+TGG + chr8_3:50956395-50956414 Msa1293570:CDS 40.0%
ATTCTAGACGCTCTCTTTCT+TGG - chr8_3:50956423-50956442 None:intergenic 40.0%
CGTGAAGTTCTTGTTGAAAG+AGG + chr8_3:50956573-50956592 Msa1293570:CDS 40.0%
CACAAGATAGAAGCTTACCA+AGG - chr8_3:50956633-50956652 None:intergenic 40.0%
! ATTTCCAGTTCCAGCTTTAG+GGG + chr8_3:50956716-50956735 Msa1293570:intron 40.0%
TCCGGTTAAATTGCAACTGA+AGG - chr8_3:50956901-50956920 None:intergenic 40.0%
GATACTTCTCTTCAAGCTAC+TGG + chr8_3:50957140-50957159 Msa1293570:intron 40.0%
AGCACAACAAGGTGGTATTA+TGG - chr8_3:50957222-50957241 None:intergenic 40.0%
CGCAATTCAGGTCAACAAAT+TGG + chr8_3:50957515-50957534 Msa1293570:three_prime_UTR 40.0%
CCAGTGTTGCATTCTTTAGA+TGG - chr8_3:50957576-50957595 None:intergenic 40.0%
CCATCTAAAGAATGCAACAC+TGG + chr8_3:50957573-50957592 Msa1293570:three_prime_UTR 40.0%
AGAAGATAGGGGAAAAGGAG+GGG - chr8_3:50952964-50952983 None:intergenic 45.0%
GAGAAGATAGGGGAAAAGGA+GGG - chr8_3:50952965-50952984 None:intergenic 45.0%
AGAGAAGATAGGGGAAAAGG+AGG - chr8_3:50952966-50952985 None:intergenic 45.0%
! ATGACATGGTGGTGTCTGTT+TGG - chr8_3:50953018-50953037 None:intergenic 45.0%
GATGTGGATGGAGTCTTTGT+GGG - chr8_3:50953052-50953071 None:intergenic 45.0%
! ATCGGAGTGCTTTCTTGAAC+GGG - chr8_3:50953077-50953096 None:intergenic 45.0%
GTAAGCTTCGAAGCGAGATT+TGG - chr8_3:50953101-50953120 None:intergenic 45.0%
ACGGCAACAATTTCAGGGAT+GGG - chr8_3:50953166-50953185 None:intergenic 45.0%
AACGGCAACAATTTCAGGGA+TGG - chr8_3:50953167-50953186 None:intergenic 45.0%
ATCCCTGAAATTGTTGCCGT+TGG + chr8_3:50953166-50953185 Msa1293570:CDS 45.0%
CACCAACGGCAACAATTTCA+GGG - chr8_3:50953171-50953190 None:intergenic 45.0%
CAATGTCCGTGAAGTTGAGA+TGG + chr8_3:50953243-50953262 Msa1293570:CDS 45.0%
GAGTACCCATCTCAACTTCA+CGG - chr8_3:50953252-50953271 None:intergenic 45.0%
CTAACACGTTGACACGATGT+TGG - chr8_3:50953362-50953381 None:intergenic 45.0%
AAACCCCGGTGTGTCAATAA+TGG - chr8_3:50953652-50953671 None:intergenic 45.0%
GCCTGATGAGATTCTTTCCA+TGG + chr8_3:50953798-50953817 Msa1293570:CDS 45.0%
AGTAGCCAATGTCTTCACCA+TGG - chr8_3:50953818-50953837 None:intergenic 45.0%
! AACAAGAGTATACGGTGTGG+AGG - chr8_3:50953841-50953860 None:intergenic 45.0%
! AGGAACAAGAGTATACGGTG+TGG - chr8_3:50953844-50953863 None:intergenic 45.0%
TCACTAACTGTAGCCTCACT+TGG + chr8_3:50954054-50954073 Msa1293570:intron 45.0%
! TCTCCGGTGTCAATTTAGGT+AGG + chr8_3:50954250-50954269 Msa1293570:intron 45.0%
ATTTACTGATCGGTGGGAAG+TGG + chr8_3:50954369-50954388 Msa1293570:CDS 45.0%
GATCGCTATTTGAGTGCAAG+TGG + chr8_3:50954391-50954410 Msa1293570:CDS 45.0%
TTGAGTGCAAGTGGTTACCT+TGG + chr8_3:50954400-50954419 Msa1293570:CDS 45.0%
!!! CAACACTCGCCCTTTTTTTG+TGG + chr8_3:50954426-50954445 Msa1293570:CDS 45.0%
GTTATGCATCATCTTCGCGA+CGG + chr8_3:50954520-50954539 Msa1293570:CDS 45.0%
CAGACGGCCAAAACCAATAT+AGG - chr8_3:50954581-50954600 None:intergenic 45.0%
TGGCCGTCTGAGAGATTATT+TGG + chr8_3:50954591-50954610 Msa1293570:CDS 45.0%
TCAAGCAAGGCAAGAGTTGA+TGG - chr8_3:50954652-50954671 None:intergenic 45.0%
ACTACACCTTTGCTCAAGCA+AGG - chr8_3:50954665-50954684 None:intergenic 45.0%
GAGGTCACTTGTGAACTTTC+TGG + chr8_3:50954685-50954704 Msa1293570:CDS 45.0%
AGCTTCTATCAGCAACCATG+TGG + chr8_3:50954774-50954793 Msa1293570:CDS 45.0%
TTCTATCAGCAACCATGTGG+TGG + chr8_3:50954777-50954796 Msa1293570:intron 45.0%
TCTATCAGCAACCATGTGGT+GGG + chr8_3:50954778-50954797 Msa1293570:intron 45.0%
CTGCAAATGGATGTTCCATC+AGG + chr8_3:50954901-50954920 Msa1293570:intron 45.0%
ATCTGCTGCACCATCAATCA+AGG - chr8_3:50954930-50954949 None:intergenic 45.0%
!! TTGTTTTTCCCCACTGCTCA+GGG - chr8_3:50954958-50954977 None:intergenic 45.0%
! CTCAAAGTGGCATTGGGATT+TGG + chr8_3:50954993-50955012 Msa1293570:CDS 45.0%
AAAGACGAAGAGTGGCATTG+GGG - chr8_3:50955045-50955064 None:intergenic 45.0%
CCACTCTTCGTCTTTATGGA+GGG + chr8_3:50955050-50955069 Msa1293570:CDS 45.0%
CACTCTTCGTCTTTATGGAG+GGG + chr8_3:50955051-50955070 Msa1293570:CDS 45.0%
! TCACCTTTTCCCTTGAGACT+GGG - chr8_3:50955135-50955154 None:intergenic 45.0%
! ATCACCTTTTCCCTTGAGAC+TGG - chr8_3:50955136-50955155 None:intergenic 45.0%
!!! GACCGCCTTGCTTTTGTTTT+AGG + chr8_3:50955387-50955406 Msa1293570:CDS 45.0%
TACATGCTGAATCATGCCTG+CGG - chr8_3:50955443-50955462 None:intergenic 45.0%
ATGTGAAGCTTCTTCCTTGC+TGG + chr8_3:50955462-50955481 Msa1293570:intron 45.0%
CTATCGTTATCCAAGACACG+AGG - chr8_3:50955552-50955571 None:intergenic 45.0%
TTCTCAAACCCCATTGAGAG+GGG - chr8_3:50955583-50955602 None:intergenic 45.0%
GGAAACATGGATGGCTATGT+AGG + chr8_3:50955964-50955983 Msa1293570:CDS 45.0%
GACTGGTAACTGAATCAAGG+TGG - chr8_3:50956068-50956087 None:intergenic 45.0%
AGTTACCAGTCCATACTCAC+AGG + chr8_3:50956077-50956096 Msa1293570:CDS 45.0%
AAGTAGCAGACCTGTGAGTA+TGG - chr8_3:50956090-50956109 None:intergenic 45.0%
AAATGAAGAGGCTGAAGCCT+GGG - chr8_3:50956166-50956185 None:intergenic 45.0%
AAAATGAAGAGGCTGAAGCC+TGG - chr8_3:50956167-50956186 None:intergenic 45.0%
CTGCTTCTCATGATGTAAGG+AGG + chr8_3:50956211-50956230 Msa1293570:CDS 45.0%
ACCTCCAGAAAAGAATGCAC+TGG + chr8_3:50956248-50956267 Msa1293570:CDS 45.0%
! TCCAGTGCATTCTTTTCTGG+AGG - chr8_3:50956252-50956271 None:intergenic 45.0%
TCCAGAAAAGAATGCACTGG+AGG + chr8_3:50956251-50956270 Msa1293570:CDS 45.0%
! TCCTCCAGTGCATTCTTTTC+TGG - chr8_3:50956255-50956274 None:intergenic 45.0%
CAGGTGATCCTGTATATGGA+GGG + chr8_3:50956361-50956380 Msa1293570:CDS 45.0%
!! AAGAGAGCGTCTAGAATGAC+AGG + chr8_3:50956426-50956445 Msa1293570:CDS 45.0%
! GCGTCTAGAATGACAGGAAA+TGG + chr8_3:50956432-50956451 Msa1293570:CDS 45.0%
TTTGGAAATGGGGAGAGAAC+AGG + chr8_3:50956498-50956517 Msa1293570:CDS 45.0%
ACGTATACGTGCGAAATGCT+GGG - chr8_3:50956556-50956575 None:intergenic 45.0%
TAGAAGCTTACCAAGGAGTC+AGG - chr8_3:50956626-50956645 None:intergenic 45.0%
CGATCTTGGATGCTTGAATG+TGG + chr8_3:50956677-50956696 Msa1293570:intron 45.0%
TTGGATGCTTGAATGTGGCA+AGG + chr8_3:50956682-50956701 Msa1293570:intron 45.0%
CACAAACAAGCACAACAAGG+TGG - chr8_3:50957230-50957249 None:intergenic 45.0%
CTGCACAAACAAGCACAACA+AGG - chr8_3:50957233-50957252 None:intergenic 45.0%
ATAGCAAAACCATGGCTCCT+TGG - chr8_3:50957460-50957479 None:intergenic 45.0%
GTGAACCTATGACGCAATTC+AGG + chr8_3:50957503-50957522 Msa1293570:three_prime_UTR 45.0%
GTTGACCTGAATTGCGTCAT+AGG - chr8_3:50957511-50957530 None:intergenic 45.0%
TGACGAGACCCTCTGTAATT+TGG + chr8_3:50957542-50957561 Msa1293570:three_prime_UTR 45.0%
TTACACATGCTTCAACACGC+AGG - chr8_3:50957614-50957633 None:intergenic 45.0%
!!! ATTTAATTTAATTTATTTTC+TGG + chr8_3:50956941-50956960 Msa1293570:intron 5.0%
GGATGTGGATGGAGTCTTTG+TGG - chr8_3:50953053-50953072 None:intergenic 50.0%
CTTTCTTGAACGGGTGGATG+TGG - chr8_3:50953068-50953087 None:intergenic 50.0%
CGGCAACAATTTCAGGGATG+GGG - chr8_3:50953165-50953184 None:intergenic 50.0%
CCACCAACGGCAACAATTTC+AGG - chr8_3:50953172-50953191 None:intergenic 50.0%
CCTGAAATTGTTGCCGTTGG+TGG + chr8_3:50953169-50953188 Msa1293570:CDS 50.0%
! TCCATCAGATTGGCCACCAA+CGG - chr8_3:50953185-50953204 None:intergenic 50.0%
GGGAGCTCTTTCCATCAGAT+TGG - chr8_3:50953195-50953214 None:intergenic 50.0%
GGACATTGAAGCGAAAACCG+AGG - chr8_3:50953231-50953250 None:intergenic 50.0%
! AGAAGAGTATGGAAGTCCGG+TGG + chr8_3:50953500-50953519 Msa1293570:CDS 50.0%
GTATGGAAGTCCGGTGGTTT+CGG + chr8_3:50953506-50953525 Msa1293570:CDS 50.0%
ATCGTAGATGCCGAAACCAC+CGG - chr8_3:50953519-50953538 None:intergenic 50.0%
ATCTCATCAGGCGTGTTCTC+CGG - chr8_3:50953790-50953809 None:intergenic 50.0%
TGGAATGGTGCTCCTCTTTG+TGG + chr8_3:50953878-50953897 Msa1293570:CDS 50.0%
CATACCAAACCCACTTGGGT+TGG + chr8_3:50954167-50954186 Msa1293570:intron 50.0%
CCACATGAGAGATCTGCCTA+CGG - chr8_3:50954492-50954511 None:intergenic 50.0%
GCAGATCTCTCATGTGGACT+CGG + chr8_3:50954495-50954514 Msa1293570:CDS 50.0%
CTCTTGCCTTGCTTGAGCAA+AGG + chr8_3:50954656-50954675 Msa1293570:CDS 50.0%
! GCTTGAGCAAAGGTGTAGTG+AGG + chr8_3:50954666-50954685 Msa1293570:CDS 50.0%
! CATCAATCAAGGCACCCTGA+TGG - chr8_3:50954919-50954938 None:intergenic 50.0%
! CATCAGGGTGCCTTGATTGA+TGG + chr8_3:50954917-50954936 Msa1293570:intron 50.0%
! TGTTTTTCCCCACTGCTCAG+GGG - chr8_3:50954957-50954976 None:intergenic 50.0%
!!! GTTGTTTTTCCCCACTGCTC+AGG - chr8_3:50954959-50954978 None:intergenic 50.0%
GTAGAAGAGCGGTCTCAAAG+TGG + chr8_3:50954980-50954999 Msa1293570:CDS 50.0%
AGCGGTCTCAAAGTGGCATT+GGG + chr8_3:50954987-50955006 Msa1293570:CDS 50.0%
TTCACATCGGTGATGACACC+AGG - chr8_3:50955019-50955038 None:intergenic 50.0%
! AAGACGAAGAGTGGCATTGG+GGG - chr8_3:50955044-50955063 None:intergenic 50.0%
GCCACTCTTCGTCTTTATGG+AGG + chr8_3:50955049-50955068 Msa1293570:CDS 50.0%
CCCTCCATAAAGACGAAGAG+TGG - chr8_3:50955053-50955072 None:intergenic 50.0%
! ACCTTTTCCCTTGAGACTGG+GGG - chr8_3:50955133-50955152 None:intergenic 50.0%
! CACCTTTTCCCTTGAGACTG+GGG - chr8_3:50955134-50955153 None:intergenic 50.0%
!! TGGCTCTAGAAAGAAACCGC+AGG + chr8_3:50955424-50955443 Msa1293570:CDS 50.0%
AGTCTCATACCCCCTCTCAA+TGG + chr8_3:50955570-50955589 Msa1293570:intron 50.0%
GTCTCATACCCCCTCTCAAT+GGG + chr8_3:50955571-50955590 Msa1293570:intron 50.0%
TCTCATACCCCCTCTCAATG+GGG + chr8_3:50955572-50955591 Msa1293570:intron 50.0%
TCTCAAACCCCATTGAGAGG+GGG - chr8_3:50955582-50955601 None:intergenic 50.0%
! AGCAGTGCAAGCAGCTTGTT+AGG + chr8_3:50956040-50956059 Msa1293570:CDS 50.0%
AATGAAGAGGCTGAAGCCTG+GGG - chr8_3:50956165-50956184 None:intergenic 50.0%
!! CGAACGTGTGCTGCTTTACT+TGG - chr8_3:50956285-50956304 None:intergenic 50.0%
CAGCCAGGTGATCCTGTATA+TGG + chr8_3:50956357-50956376 Msa1293570:CDS 50.0%
CCTCCATATACAGGATCACC+TGG - chr8_3:50956363-50956382 None:intergenic 50.0%
CCAGGTGATCCTGTATATGG+AGG + chr8_3:50956360-50956379 Msa1293570:CDS 50.0%
CACGTATACGTGCGAAATGC+TGG - chr8_3:50956557-50956576 None:intergenic 50.0%
ACTCTGGATTCCTGACTCCT+TGG + chr8_3:50956613-50956632 Msa1293570:CDS 50.0%
CAATATAGCGCCCCTAAAGC+TGG - chr8_3:50956729-50956748 None:intergenic 50.0%
ATGGACATGTTTGTCGCTCC+TGG + chr8_3:50957314-50957333 Msa1293570:CDS 50.0%
TGTAGCACATCTATGGCACC+AGG - chr8_3:50957335-50957354 None:intergenic 50.0%
ACTAGATCTCCAAGGAGCCA+TGG + chr8_3:50957448-50957467 Msa1293570:three_prime_UTR 50.0%
!! AGTGGTGGTGGATGACATGG+TGG - chr8_3:50953029-50953048 None:intergenic 55.0%
AGTCTTTGTGGGAGTGGTGG+TGG - chr8_3:50953041-50953060 None:intergenic 55.0%
TGGAGTCTTTGTGGGAGTGG+TGG - chr8_3:50953044-50953063 None:intergenic 55.0%
GGATGGAGTCTTTGTGGGAG+TGG - chr8_3:50953047-50953066 None:intergenic 55.0%
CTTGAACGGGTGGATGTGGA+TGG - chr8_3:50953064-50953083 None:intergenic 55.0%
! GGAGTGCTTTCTTGAACGGG+TGG - chr8_3:50953074-50953093 None:intergenic 55.0%
! TCCCTTCTCGAAGCACTCCT+CGG + chr8_3:50953211-50953230 Msa1293570:CDS 55.0%
!! ACCGAGGAGTGCTTCGAGAA+GGG - chr8_3:50953215-50953234 None:intergenic 55.0%
!! AACCGAGGAGTGCTTCGAGA+AGG - chr8_3:50953216-50953235 None:intergenic 55.0%
CAACGAGGTTCAAGAGCGGA+GGG - chr8_3:50953307-50953326 None:intergenic 55.0%
TTTACCTGGAAGCGGCAACG+AGG - chr8_3:50953322-50953341 None:intergenic 55.0%
! CACACCGGGGTTTGTTCTCA+AGG + chr8_3:50953659-50953678 Msa1293570:CDS 55.0%
GTAGGCGAAGAAGGGTGAAC+CGG + chr8_3:50953768-50953787 Msa1293570:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG - chr8_3:50954214-50954233 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG + chr8_3:50954212-50954231 Msa1293570:intron 55.0%
! AAGGGCGAGTGTTGTCTCCA+AGG - chr8_3:50954420-50954439 None:intergenic 55.0%
! GTGGCTCTGCCTAAGGATAG+AGG + chr8_3:50954445-50954464 Msa1293570:CDS 55.0%
CCGTAGGCAGATCTCTCATG+TGG + chr8_3:50954489-50954508 Msa1293570:CDS 55.0%
GATCTCTCATGTGGACTCGG+AGG + chr8_3:50954498-50954517 Msa1293570:CDS 55.0%
! TCATCTTCGCGACGGTGTCA+AGG + chr8_3:50954528-50954547 Msa1293570:CDS 55.0%
! CATCTTCGCGACGGTGTCAA+GGG + chr8_3:50954529-50954548 Msa1293570:CDS 55.0%
AGATCCTTCCCCTGAGCAGT+GGG + chr8_3:50954946-50954965 Msa1293570:CDS 55.0%
GAGCGGTCTCAAAGTGGCAT+TGG + chr8_3:50954986-50955005 Msa1293570:CDS 55.0%
! AGTGGCATTGGGATTTGGCC+TGG + chr8_3:50954998-50955017 Msa1293570:CDS 55.0%
! AGACGAAGAGTGGCATTGGG+GGG - chr8_3:50955043-50955062 None:intergenic 55.0%
ATGGAGGGGCTGCATTTGAG+AGG + chr8_3:50955065-50955084 Msa1293570:CDS 55.0%
TGGAGGGGCTGCATTTGAGA+GGG + chr8_3:50955066-50955085 Msa1293570:CDS 55.0%
!! TGAGACTGGGGGGCATTCAA+TGG - chr8_3:50955122-50955141 None:intergenic 55.0%
TTGAATGCCCCCCAGTCTCA+AGG + chr8_3:50955122-50955141 Msa1293570:CDS 55.0%
TGAATGCCCCCCAGTCTCAA+GGG + chr8_3:50955123-50955142 Msa1293570:CDS 55.0%
! CCTTTTCCCTTGAGACTGGG+GGG - chr8_3:50955132-50955151 None:intergenic 55.0%
TTAGTCCTCTTCCCCCACCT+CGG - chr8_3:50955296-50955315 None:intergenic 55.0%
TGGGGGAAGAGGACTAACAG+AGG + chr8_3:50955299-50955318 Msa1293570:CDS 55.0%
! CACGTGCTGCTGCTAGATCA+TGG + chr8_3:50955337-50955356 Msa1293570:CDS 55.0%
! GACAGAAGGGTATGCCAGCA+AGG - chr8_3:50955479-50955498 None:intergenic 55.0%
GCAGACCTGTGAGTATGGAC+TGG - chr8_3:50956085-50956104 None:intergenic 55.0%
! GAAGCGTTTATGCCGGCACA+TGG - chr8_3:50956126-50956145 None:intergenic 55.0%
GGGTCTCAGGGATAGTCATC+TGG - chr8_3:50956326-50956345 None:intergenic 55.0%
GATCAGGAGATGGGGTCTCA+GGG - chr8_3:50956338-50956357 None:intergenic 55.0%
TGATCAGGAGATGGGGTCTC+AGG - chr8_3:50956339-50956358 None:intergenic 55.0%
ACCTGGCTGATCAGGAGATG+GGG - chr8_3:50956346-50956365 None:intergenic 55.0%
CACCTGGCTGATCAGGAGAT+GGG - chr8_3:50956347-50956366 None:intergenic 55.0%
TCACCTGGCTGATCAGGAGA+TGG - chr8_3:50956348-50956367 None:intergenic 55.0%
ACAGGATCACCTGGCTGATC+AGG - chr8_3:50956354-50956373 None:intergenic 55.0%
! GGAGGGCATAGAAAGGAGCT+TGG + chr8_3:50956378-50956397 Msa1293570:CDS 55.0%
! GATCGCCTTGTTGTGGCTCT+CGG + chr8_3:50957257-50957276 Msa1293570:CDS 55.0%
! ATCGCCTTGTTGTGGCTCTC+GGG + chr8_3:50957258-50957277 Msa1293570:CDS 55.0%
GAAAAGGAGGGGAGCGATGC+AGG - chr8_3:50952953-50952972 None:intergenic 60.0%
!! GGGAGTGGTGGTGGATGACA+TGG - chr8_3:50953032-50953051 None:intergenic 60.0%
!! CAAGCCGCAGCTGTCGCTTT+CGG + chr8_3:50953130-50953149 Msa1293570:CDS 60.0%
!! GCCGTTGGTGGCCAATCTGA+TGG + chr8_3:50953181-50953200 Msa1293570:CDS 60.0%
GCAACGAGGTTCAAGAGCGG+AGG - chr8_3:50953308-50953327 None:intergenic 60.0%
GCGGCAACGAGGTTCAAGAG+CGG - chr8_3:50953311-50953330 None:intergenic 60.0%
! TGAACCTCGTTGCCGCTTCC+AGG + chr8_3:50953315-50953334 Msa1293570:CDS 60.0%
CGGACAATTGCGGCCAAGTG+AGG - chr8_3:50954070-50954089 None:intergenic 60.0%
! CAGGCCAACCCAAGTGGGTT+TGG - chr8_3:50954174-50954193 None:intergenic 60.0%
!! CAAACCCACTTGGGTTGGCC+TGG + chr8_3:50954172-50954191 Msa1293570:intron 60.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8_3:50954179-50954198 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr8_3:50954181-50954200 Msa1293570:intron 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr8_3:50954186-50954205 Msa1293570:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr8_3:50954187-50954206 Msa1293570:intron 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr8_3:50954194-50954213 Msa1293570:intron 60.0%
CAGATCCTTCCCCTGAGCAG+TGG + chr8_3:50954945-50954964 Msa1293570:CDS 60.0%
GATCCTTCCCCTGAGCAGTG+GGG + chr8_3:50954947-50954966 Msa1293570:CDS 60.0%
TTTCCCCACTGCTCAGGGGA+AGG - chr8_3:50954953-50954972 None:intergenic 60.0%
! GGCATTGGGGGGGTTCACAT+CGG - chr8_3:50955032-50955051 None:intergenic 60.0%
! GACGAAGAGTGGCATTGGGG+GGG - chr8_3:50955042-50955061 None:intergenic 60.0%
CCCCCCAGTCTCAAGGGAAA+AGG + chr8_3:50955129-50955148 Msa1293570:CDS 60.0%
ACCCCATCTCCTGATCAGCC+AGG + chr8_3:50956342-50956361 Msa1293570:CDS 60.0%
AGCGCCCCTAAAGCTGGAAC+TGG - chr8_3:50956723-50956742 None:intergenic 60.0%
GAGCCACAACAAGGCGATCG+CGG - chr8_3:50957256-50957275 None:intergenic 60.0%
CCAACCCGAGAGCCACAACA+AGG - chr8_3:50957265-50957284 None:intergenic 60.0%
! CCTTGTTGTGGCTCTCGGGT+TGG + chr8_3:50957262-50957281 Msa1293570:CDS 60.0%
! AAGCGACAGCTGCGGCTTGG+AGG - chr8_3:50953129-50953148 None:intergenic 65.0%
CGAAAGCGACAGCTGCGGCT+TGG - chr8_3:50953132-50953151 None:intergenic 65.0%
CTCGCCGAAAGCGACAGCTG+CGG - chr8_3:50953137-50953156 None:intergenic 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8_3:50954175-50954194 Msa1293570:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG - chr8_3:50954180-50954199 None:intergenic 65.0%
GGTCCCAAGCCAACACCACC+AGG - chr8_3:50954193-50954212 None:intergenic 65.0%
! CTTCGCGACGGTGTCAAGGG+AGG + chr8_3:50954532-50954551 Msa1293570:CDS 65.0%
TTGCTTGCCCATGCTGGCCG+AGG + chr8_3:50955276-50955295 Msa1293570:CDS 65.0%
TTGCCCATGCTGGCCGAGGT+GGG + chr8_3:50955280-50955299 Msa1293570:CDS 65.0%
! CAGCCGCGATCGCCTTGTTG+TGG + chr8_3:50957250-50957269 Msa1293570:intron 65.0%
! CGACAGCTGCGGCTTGGAGG+CGG - chr8_3:50953126-50953145 None:intergenic 70.0%
CTTGCCCATGCTGGCCGAGG+TGG + chr8_3:50955279-50955298 Msa1293570:CDS 70.0%
TGCCCATGCTGGCCGAGGTG+GGG + chr8_3:50955281-50955300 Msa1293570:CDS 70.0%
TCCCCCACCTCGGCCAGCAT+GGG - chr8_3:50955286-50955305 None:intergenic 70.0%
TTCCCCCACCTCGGCCAGCA+TGG - chr8_3:50955287-50955306 None:intergenic 70.0%
GCCCATGCTGGCCGAGGTGG+GGG + chr8_3:50955282-50955301 Msa1293570:CDS 75.0%
GCTGGCCGAGGTGGGGGAAG+AGG + chr8_3:50955288-50955307 Msa1293570:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 50952941 50957654 50952941 ID=Msa1293570;Name=Msa1293570
chr8_3 mRNA 50952941 50957654 50952941 ID=Msa1293570-mRNA-1;Parent=Msa1293570;Name=Msa1293570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|1|1|8|215|809
chr8_3 exon 50952941 50953336 50952941 ID=Msa1293570-mRNA-1:exon:14167;Parent=Msa1293570-mRNA-1
chr8_3 exon 50953489 50953680 50953489 ID=Msa1293570-mRNA-1:exon:14168;Parent=Msa1293570-mRNA-1
chr8_3 exon 50953772 50953978 50953772 ID=Msa1293570-mRNA-1:exon:14169;Parent=Msa1293570-mRNA-1
chr8_3 exon 50954367 50954795 50954367 ID=Msa1293570-mRNA-1:exon:14170;Parent=Msa1293570-mRNA-1
chr8_3 exon 50954923 50955150 50954923 ID=Msa1293570-mRNA-1:exon:14171;Parent=Msa1293570-mRNA-1
chr8_3 exon 50955264 50955459 50955264 ID=Msa1293570-mRNA-1:exon:14172;Parent=Msa1293570-mRNA-1
chr8_3 exon 50955950 50956634 50955950 ID=Msa1293570-mRNA-1:exon:14173;Parent=Msa1293570-mRNA-1
chr8_3 exon 50957253 50957654 50957253 ID=Msa1293570-mRNA-1:exon:14174;Parent=Msa1293570-mRNA-1
chr8_3 five_prime_UTR 50952941 50953030 50952941 ID=Msa1293570-mRNA-1:five_prime_utr;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50953031 50953336 50953031 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50953489 50953680 50953489 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50953772 50953978 50953772 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50954367 50954795 50954367 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50954923 50955150 50954923 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50955264 50955459 50955264 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50955950 50956634 50955950 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 CDS 50957253 50957439 50957253 ID=Msa1293570-mRNA-1:cds;Parent=Msa1293570-mRNA-1
chr8_3 three_prime_UTR 50957440 50957654 50957440 ID=Msa1293570-mRNA-1:three_prime_utr;Parent=Msa1293570-mRNA-1
Gene Sequence

>Msa1293570

ATGTCATCCACCACCACTCCCACAAAGACTCCATCCACATCCACCCGTTCAAGAAAGCACTCCGATTCCAAATCTCGCTTCGAAGCTTACAACCGCCTCCAAGCCGCAGCTGTCGCTTTCGGCGAGACTCTCCCCATCCCTGAAATTGTTGCCGTTGGTGGCCAATCTGATGGAAAGAGCTCCCTTCTCGAAGCACTCCTCGGTTTTCGCTTCAATGTCCGTGAAGTTGAGATGGGTACTCGCCGCCCTCTTATTCTTCAAATGCTTCACGATCCCTCCGCTCTTGAACCTCGTTGCCGCTTCCAGGAGGAAGATTCAGAAGAGTATGGAAGTCCGGTGGTTTCGGCATCTACGATTGCTGACATTATAAAGTCTCGAACCGAAGCACTTTTGAAGATAACCAAAACAGCAGTTTCTCCTAAGCCAATTGTACTCAAAGCTGAATACGCACACTGTCCAAATCTTACCATTATTGACACACCGGGGTTTGTTCTCAAGGCGAAGAAGGGTGAACCGGAGAACACGCCTGATGAGATTCTTTCCATGGTGAAGACATTGGCTACTCCTCCACACCGTATACTCTTGTTCCTTCAACAAAGTAGTGTGGAATGGTGCTCCTCTTTGTGGTTAGACTCTATTCGTGAAATTGATCCCACGTTTAGACGGACAATCATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGAATTTACTGATCGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGACAACACTCGCCCTTTTTTTGTGGCTCTGCCTAAGGATAGAGGCAACATTTCAAATGAAGAGTTCCGTAGGCAGATCTCTCATGTGGACTCGGAGGTTATGCATCATCTTCGCGACGGTGTCAAGGGAGGTTTTGATGAAGAAAAGTTCAAATCCTATATTGGTTTTGGCCGTCTGAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTGCTCCATCAACTCTTGCCTTGCTTGAGCAAAGGTGTAGTGAGGTCACTTGTGAACTTTCTGGATTGGATTCAAAAATTGAGGCCACTTCAGACATTTCTCATCTGAGGAAATTCGCAATGCTGTGTGCAGCTTCTATCAGCAACCATGTGGGTGCCTTGATTGATGGTGCAGCAGATCCTTCCCCTGAGCAGTGGGGAAAAACAACAGTAGAAGAGCGGTCTCAAAGTGGCATTGGGATTTGGCCTGGTGTCATCACCGATGTGAACCCCCCCAATGCCACTCTTCGTCTTTATGGAGGGGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCAGTCTCAAGGGAAAAGGTTGCAAATATATTGCTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCATGTGACCGCCTTGCTTTTGTTTTAGGAAGCTTATTTGATTTGGCTCTAGAAAGAAACCGCAGGCATGATTCAGCATATGGGATAAAAACGGGAAACATGGATGGCTATGTAGGTTTTCATGCTGCTTTAAGGTGTGCTTACACTCGATTCTTAAAGGATCTTGCTAAGCAGTGCAAGCAGCTTGTTAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGACTTTCAACCATGTGCCGGCATAAACGCTTCAAGTTTCAACAAATTTCCCCAGGCTTCAGCCTCTTCATTTTTTCTTGAATTGAGTGATACAAATTCTGCTTCTCATGATGTAAGGAGGGACCAAGAAAATATACCTCCAGAAAAGAATGCACTGGAGGAAACAACACCAAGTAAAGCAGCACACGTTCGAGAGAGTTTGCGAGAAAGCCAGATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCTGTATATGGAGGGCATAGAAAGGAGCTTGGAATATGCAATGACATGGGGCCAAGAAAGAGAGCGTCTAGAATGACAGGAAATGGCAAAAATTCTGACTATATTAGACTTCAAAATGATTCCATTTTATTTGGAAATGGGGAGAGAACAGGATCAGCGTACTCAGAAATCTGTAAATCAGCTGCCCAGCATTTCGCACGTATACGTGAAGTTCTTGTTGAAAGAGGCGTTACATCGACATTAAACTCTGGATTCCTGACTCCTTGCCGCGATCGCCTTGTTGTGGCTCTCGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTCGCTCCTGGTGCCATAGATGTGCTACAAAATGAACGCGAGTCTCTTATGAAGCGTCAGAAGATACTCCATTCTTGCTTGAATGAGTTCAAAAACGTTGCTCGGTCCCTTTGA
Protein sequence

>Msa1293570

MSSTTTPTKTPSTSTRSRKHSDSKSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMLHDPSALEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKITKTAVSPKPIVLKAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKTLATPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTIIVVSKFDNRLKEFTDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNISNEEFRRQISHVDSEVMHHLRDGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPSTLALLEQRCSEVTCELSGLDSKIEATSDISHLRKFAMLCAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGIWPGVITDVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAEIARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRRHDSAYGIKTGNMDGYVGFHAALRCAYTRFLKDLAKQCKQLVRHHLDSVTSPYSQVCYFNDFQPCAGINASSFNKFPQASASSFFLELSDTNSASHDVRRDQENIPPEKNALEETTPSKAAHVRESLRESQMTIPETPSPDQPGDPVYGGHRKELGICNDMGPRKRASRMTGNGKNSDYIRLQNDSILFGNGERTGSAYSEICKSAAQHFARIREVLVERGVTSTLNSGFLTPCRDRLVVALGLDLFAVNDEKFMDMFVAPGAIDVLQNERESLMKRQKILHSCLNEFKNVARSL*